Rroxscaffold_2G00148820

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000111
Physical Location & Seq
Reverse (-)
86396877 .. 86398046
1170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00148820.1

Sequence Viewer

Length: 1170 bp
ATGGAAGACCGTGGCCAAAACGTCGACCTTCCACCCGAGATCATATATGAGATTCTTTCCAGGTTACCAGTGAAGCCCTTGTACCGTTTCAAGTGTGTATCAAAGCCATGGCGGTCTCTAATCTCCCATCCTGATTTCGTCGCAAACTATTCCAAAGCCATTGAGAATAAGGATGTCTTCTTCAGAAGACGGCGCCTCCTTTTTACTCTTTATGGCACGAAGAATCGGCTATTCTCTTTGAATCTTGACCGATTTCTCAATGAGAAGCATAATGTTGACGTTGATGGTTTAGTAGCAACGCCCACTGAGCTCGACTTTGTTTACAATCATATTCCAACAGGTCGACTGGGTTGGATTCCCTTTGTCCATTGTTCCTGCTATGGCTTGTTCTTGTCCCTTGTAGCTTCTAAAGGGTGCTACAGCGTCAGTTTGATTAACCCTGTAACCAAGGAATCGAAGACACTAGAAAAGGCACCAATAGAGAGATCAGAACCAGTGAATCGCTACCCTCGGCACTTATATGGACTTGGATTTGATTACTCCACTAATGAATACAAGGTAATTCACGTGCGGGATTATCATCATGGAACTGGTTTTTGTGTCTATACATTGCAGACTGATTCTTGGCGACAGATTGACCCCTTATTTCCTTACAACCTTTTACCTTATGATGGGATCCTGGTGAATGGTGGTGTTCATTGGTTGGTGACTAAGGTTGCAGATAACTCGTTGGTGATTATGTCTTTTCTTTTAGCAGAGGAGGAGATTAGAGAAATTGCACTACCGCCCAATGCCACTAGTTCAATTCAACTAGTGGCGTTCAGAAATTGGCTATGCATAACACCACAATCACCAAAGAATGATGAAGTAACATTTAATGAGTTTTGGATCATGAAGGAATACGGAATGAGGGAGTCTTGGACTAAAATGCAGGTCTCCATCCCATTTCGCCGGTTATCACATTCTGGCTTTTGGACAGAAACTTATGATTTGATGGTGTTTGATGATTCGTTAGTTATGTACAATTTTGATGATGGAACATTCTGGAATCTATCAATTGGTAAAACTAGCGATGATCACTTTGGTACCGTTGGGATCTATTTGGAGAGCCTACCTTCACTCAATCGATCAAGAACAACAAGACCTAAGGAAGATGAATCCACTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

389

Amino Acids

45.19

Weight (kDa)

6.28

Isoelectric Point (pI)

44.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 9 - 46 9.1e-10 F-box domain
F-box-like PF12937 9 - 44 2e-07 F-box-like
FBA_1 PF07734 124 - 371 1.6e-18 F-box associated beta propeller domain
FBA_3 PF08268 132 - 319 7.9e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 922
Acc65I GGTACC 1 cut(s) 1085
AccB1I GGYRCC 3 cut(s) 192, 472, 1085
AccI GTMKAC 2 cut(s) 24, 343
AciI CCGC 3 cut(s) 112, 571, 785
AclWI GGATC 4 cut(s) 670, 683, 896, 1103
AcoI YGGCCR 1 cut(s) 13
AcuI CTGAAG 1 cut(s) 166
AcvI CACGTG 1 cut(s) 568
AcyI GRCGYC 1 cut(s) 193
AdeI CACNNNGTG 1 cut(s) 1167
AfaI GTAC 3 cut(s) 83, 1022, 1087
AfiI CCNNNNNNNGG 1 cut(s) 671
AgsI TTSAA 4 cut(s) 91, 241, 804, 809
AhlI ACTAGT 2 cut(s) 797, 811
AjnI CCWGG 2 cut(s) 59, 678
AluBI AGCT 2 cut(s) 310, 404
AluI AGCT 2 cut(s) 310, 404
Alw21I GWGCWC 1 cut(s) 312
Alw26I GTCTC 2 cut(s) 120, 940
AlwI GGATC 4 cut(s) 670, 683, 896, 1103
Ama87I CYCGRG 1 cut(s) 35
AoxI GGCC 1 cut(s) 13
Asp718I GGTACC 1 cut(s) 1085
AspLEI GCGC 1 cut(s) 195
AsuHPI GGTGA 4 cut(s) 694, 718, 745, 843
AvaI CYCGRG 1 cut(s) 35
AxyI CCTNAGG 1 cut(s) 1146
BaeI ACNNNNGTAYC 2 cut(s) 1069, 1102
BalI TGGCCA 1 cut(s) 15
BamHI GGATCC 1 cut(s) 675
BanI GGYRCC 3 cut(s) 192, 472, 1085
BanII GRGCYC 1 cut(s) 312
BarI GAAGNNNNNNTAC 2 cut(s) 65, 97
BbrPI CACGTG 1 cut(s) 568
BbsI GAAGAC 4 cut(s) 12, 169, 193, 464
Bbv12I GWGCWC 1 cut(s) 312
BccI CCATC 6 cut(s) 135, 278, 665, 947, 988, 1028
BceAI ACGGC 1 cut(s) 206
BcgI CGANNNNNNTGC 2 cut(s) 708, 742
BciT130I CCWGG 2 cut(s) 61, 680
BclI TGATCA 1 cut(s) 1075
BcoDI GTCTC 2 cut(s) 120, 940
BcuI ACTAGT 2 cut(s) 797, 811
BfaI CTAG 4 cut(s) 464, 798, 812, 1068
BfmI CTRYAG 1 cut(s) 418
BfoI RGCGCY 1 cut(s) 196
BfuAI ACCTGC 1 cut(s) 922
Bme1390I CCNGG 2 cut(s) 61, 680
BmeT110I CYCGRG 1 cut(s) 35
BmiI GGNNCC 4 cut(s) 194, 474, 677, 1087
BmrFI CCNGG 2 cut(s) 61, 680
BmrI ACTGGG 1 cut(s) 356
BmuI ACTGGG 1 cut(s) 356
BpiI GAAGAC 4 cut(s) 12, 169, 193, 464
Bsa29I ATCGAT 1 cut(s) 1126
BsaAI YACGTR 1 cut(s) 568
BsaBI GATNNNNATC 1 cut(s) 579
BsaHI GRCGYC 1 cut(s) 193
BsaI GGTCTC 2 cut(s) 120, 940
BsaJI CCNNGG 4 cut(s) 10, 107, 447, 509
BsaXI ACNNNNNCTCC 2 cut(s) 180, 210
Bsc4I CCNNNNNNNGG 1 cut(s) 671
Bse118I RCCGGY 1 cut(s) 951
Bse1I ACTGG 4 cut(s) 68, 351, 494, 595
Bse21I CCTNAGG 1 cut(s) 1146
Bse3DI GCAATG 1 cut(s) 608
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 2 cut(s) 61, 680
BseCI ATCGAT 1 cut(s) 1126
BseDI CCNNGG 4 cut(s) 10, 107, 447, 509
BseGI GGATG 3 cut(s) 127, 178, 939
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 1 cut(s) 671
BseMI GCAATG 1 cut(s) 608
BseMII CTCAG 1 cut(s) 297
BseNI ACTGG 4 cut(s) 68, 351, 494, 595
BseRI GAGGAG 2 cut(s) 773, 776
BshFI GGCC 1 cut(s) 15
BshNI GGYRCC 3 cut(s) 192, 472, 1085
BshVI ATCGAT 1 cut(s) 1126
BsiHKAI GWGCWC 1 cut(s) 312
BsiHKCI CYCGRG 1 cut(s) 35
BsiSI CCGG 1 cut(s) 952
BslFI GGGAC 1 cut(s) 379
BslI CCNNNNNNNGG 1 cut(s) 671
BsmAI GTCTC 2 cut(s) 120, 940
BsmFI GGGAC 1 cut(s) 379
BsnI GGCC 1 cut(s) 15
Bso31I GGTCTC 2 cut(s) 120, 940
BsoBI CYCGRG 1 cut(s) 35
Bsp1286I GDGCHC 1 cut(s) 312
Bsp1407I TGTACA 1 cut(s) 1020
Bsp143I GATC 7 cut(s) 39, 485, 675, 888, 1075, 1095, 1127
Bsp19I CCATGG 1 cut(s) 107
BspACI CCGC 3 cut(s) 112, 571, 785
BspANI GGCC 1 cut(s) 15
BspCNI CTCAG 1 cut(s) 298
BspDI ATCGAT 1 cut(s) 1126
BspHI TCATGA 1 cut(s) 891
BspLI GGNNCC 4 cut(s) 194, 474, 677, 1087
BspMI ACCTGC 1 cut(s) 922
BspPI GGATC 4 cut(s) 670, 683, 896, 1103
BspT107I GGYRCC 3 cut(s) 192, 472, 1085
BspTNI GGTCTC 2 cut(s) 120, 940
BsrDI GCAATG 1 cut(s) 608
BsrFI RCCGGY 1 cut(s) 951
BsrGI TGTACA 1 cut(s) 1020
BsrI ACTGG 4 cut(s) 68, 351, 494, 595
BssAI RCCGGY 1 cut(s) 951
BssECI CCNNGG 4 cut(s) 10, 107, 447, 509
BssMI GATC 7 cut(s) 39, 485, 675, 888, 1075, 1095, 1127
BssNI GRCGYC 1 cut(s) 193
BssT1I CCWWGG 2 cut(s) 107, 447
Bst2UI CCWGG 2 cut(s) 61, 680
Bst4CI ACNGT 3 cut(s) 11, 86, 1090
BstACI GRCGYC 1 cut(s) 193
BstAUI TGTACA 1 cut(s) 1020
BstBAI YACGTR 1 cut(s) 568
BstDEI CTNAG 4 cut(s) 306, 711, 1146, 1164
BstDSI CCRYGG 2 cut(s) 10, 107
BstEII GGTNACC 1 cut(s) 63
BstF5I GGATG 3 cut(s) 127, 178, 939
BstH2I RGCGCY 1 cut(s) 196
BstHHI GCGC 1 cut(s) 195
BstKTI GATC 7 cut(s) 42, 488, 678, 891, 1078, 1098, 1130
BstMAI GTCTC 2 cut(s) 120, 940
BstMBI GATC 7 cut(s) 39, 485, 675, 888, 1075, 1095, 1127
BstMWI GCNNNNNNNGC 1 cut(s) 307
BstNI CCWGG 2 cut(s) 61, 680
BstPI GGTNACC 1 cut(s) 63
BstSCI CCNGG 2 cut(s) 59, 678
BstSFI CTRYAG 1 cut(s) 418
BstV2I GAAGAC 4 cut(s) 12, 169, 193, 464
BstX2I RGATCY 2 cut(s) 675, 1095
BstYI RGATCY 2 cut(s) 675, 1095
Bsu15I ATCGAT 1 cut(s) 1126
Bsu36I CCTNAGG 1 cut(s) 1146
BsuRI GGCC 1 cut(s) 15
BsuTUI ATCGAT 1 cut(s) 1126
BtgI CCRYGG 2 cut(s) 10, 107
BtgZI GCGATG 1 cut(s) 1086
BtsCI GGATG 3 cut(s) 127, 178, 939
BtsIMutI CAGTG 3 cut(s) 75, 303, 501
BveI ACCTGC 1 cut(s) 922
CciI TCATGA 1 cut(s) 891
CfoI GCGC 1 cut(s) 195
Cfr10I RCCGGY 1 cut(s) 951
ClaI ATCGAT 1 cut(s) 1126
CseI GACGC 1 cut(s) 412
Csp6I GTAC 3 cut(s) 82, 1021, 1086
CviAII CATG 3 cut(s) 108, 584, 892
CviQI GTAC 3 cut(s) 82, 1021, 1086
DdeI CTNAG 4 cut(s) 306, 711, 1146, 1164
DinI GGCGCC 1 cut(s) 194
DpnI GATC 7 cut(s) 41, 487, 677, 890, 1077, 1097, 1129
DpnII GATC 7 cut(s) 39, 485, 675, 888, 1075, 1095, 1127
DraIII CACNNNGTG 1 cut(s) 1167
EaeI YGGCCR 1 cut(s) 13
Ecl136II GAGCTC 1 cut(s) 310
Eco130I CCWWGG 2 cut(s) 107, 447
Eco24I GRGCYC 1 cut(s) 312
Eco31I GGTCTC 2 cut(s) 120, 940
Eco53kI GAGCTC 1 cut(s) 310
Eco57I CTGAAG 1 cut(s) 166
Eco72I CACGTG 1 cut(s) 568
Eco81I CCTNAGG 1 cut(s) 1146
Eco88I CYCGRG 1 cut(s) 35
Eco91I GGTNACC 1 cut(s) 63
EcoICRI GAGCTC 1 cut(s) 310
EcoO65I GGTNACC 1 cut(s) 63
EcoRII CCWGG 2 cut(s) 59, 678
EcoT14I CCWWGG 2 cut(s) 107, 447
EcoT22I ATGCAT 1 cut(s) 839
EcoT38I GRGCYC 1 cut(s) 312
EgeI GGCGCC 1 cut(s) 194
EheI GGCGCC 1 cut(s) 194
ErhI CCWWGG 2 cut(s) 107, 447
FaeI CATG 3 cut(s) 111, 587, 895
FalI AAGNNNNNCTT 2 cut(s) 161, 193
FaqI GGGAC 1 cut(s) 379
FatI CATG 3 cut(s) 107, 583, 891
FauI CCCGC 1 cut(s) 564
FbaI TGATCA 1 cut(s) 1075
FblI GTMKAC 2 cut(s) 24, 343
FokI GGATG 3 cut(s) 114, 185, 926
FriOI GRGCYC 1 cut(s) 312
FspBI CTAG 4 cut(s) 464, 798, 812, 1068
GlaI GCGC 1 cut(s) 194
HaeII RGCGCY 1 cut(s) 196
HaeIII GGCC 1 cut(s) 15
HapII CCGG 1 cut(s) 952
HgaI GACGC 1 cut(s) 412
HhaI GCGC 1 cut(s) 195
Hin1I GRCGYC 1 cut(s) 193
Hin1II CATG 3 cut(s) 111, 587, 895
Hin6I GCGC 1 cut(s) 193
HinP1I GCGC 1 cut(s) 193
HincII GTYRAC 3 cut(s) 25, 277, 344
HindII GTYRAC 3 cut(s) 25, 277, 344
HpaII CCGG 1 cut(s) 952
HphI GGTGA 4 cut(s) 694, 718, 745, 843
Hpy166II GTNNAC 4 cut(s) 25, 277, 322, 344
Hpy188I TCNGA 3 cut(s) 185, 490, 824
Hpy188III TCNNGA 5 cut(s) 131, 245, 892, 1045, 1131
Hpy8I GTNNAC 4 cut(s) 25, 277, 322, 344
Hpy99I CGWCG 2 cut(s) 26, 143
HpyAV CCTTC 3 cut(s) 38, 889, 1125
HpyCH4III ACNGT 3 cut(s) 11, 86, 1090
HpyCH4IV ACGT 3 cut(s) 21, 279, 567
HpyCH4V TGCA 5 cut(s) 613, 719, 779, 837, 931
HpyF10VI GCNNNNNNNGC 1 cut(s) 307
HpyF3I CTNAG 4 cut(s) 306, 711, 1146, 1164
HpySE526I ACGT 3 cut(s) 21, 279, 567
Hsp92I GRCGYC 1 cut(s) 193
Hsp92II CATG 3 cut(s) 111, 587, 895
HspAI GCGC 1 cut(s) 193
KasI GGCGCC 1 cut(s) 192
KpnI GGTACC 1 cut(s) 1089
Ksp22I TGATCA 1 cut(s) 1075
Kzo9I GATC 7 cut(s) 39, 485, 675, 888, 1075, 1095, 1127
MaeI CTAG 4 cut(s) 464, 798, 812, 1068
MaeII ACGT 3 cut(s) 21, 279, 567
MaeIII GTNAC 4 cut(s) 63, 442, 706, 868
MalI GATC 7 cut(s) 41, 487, 677, 890, 1077, 1097, 1129
MboI GATC 7 cut(s) 39, 485, 675, 888, 1075, 1095, 1127
MboII GAAGA 7 cut(s) 17, 169, 172, 198, 232, 469, 1163
MfeI CAATTG 1 cut(s) 1056
MflI RGATCY 2 cut(s) 675, 1095
MhlI GDGCHC 1 cut(s) 312
MlsI TGGCCA 1 cut(s) 15
MluCI AATT 6 cut(s) 561, 774, 804, 826, 1024, 1056
MluNI TGGCCA 1 cut(s) 15
Mly113I GGCGCC 1 cut(s) 193
MlyI GAGTC 1 cut(s) 923
MmeI TCCRAC 2 cut(s) 332, 359
MnlI CCTC 5 cut(s) 206, 519, 751, 754, 903
Mox20I TGGCCA 1 cut(s) 15
Mph1103I ATGCAT 1 cut(s) 839
MscI TGGCCA 1 cut(s) 15
MseI TTAA 2 cut(s) 435, 876
MslI CAYNNNNRTG 1 cut(s) 519
Msp20I TGGCCA 1 cut(s) 15
MspI CCGG 1 cut(s) 952
MspR9I CCNGG 2 cut(s) 61, 680
MunI CAATTG 1 cut(s) 1056
MvaI CCWGG 2 cut(s) 61, 680
MwoI GCNNNNNNNGC 1 cut(s) 307
NarI GGCGCC 1 cut(s) 193
NcoI CCATGG 1 cut(s) 107
NdeII GATC 7 cut(s) 39, 485, 675, 888, 1075, 1095, 1127
NlaIII CATG 3 cut(s) 111, 587, 895
NlaIV GGNNCC 4 cut(s) 194, 474, 677, 1087
NmeAIII GCCGAG 1 cut(s) 490
NmuCI GTSAC 1 cut(s) 706
NsiI ATGCAT 1 cut(s) 839
PagI TCATGA 1 cut(s) 891
PleI GAGTC 1 cut(s) 922
PluTI GGCGCC 1 cut(s) 196
PmaCI CACGTG 1 cut(s) 568
PmlI CACGTG 1 cut(s) 568
PpsI GAGTC 1 cut(s) 922
Ppu21I YACGTR 1 cut(s) 568
Psp124BI GAGCTC 1 cut(s) 312
Psp6I CCWGG 2 cut(s) 59, 678
PspCI CACGTG 1 cut(s) 568
PspEI GGTNACC 1 cut(s) 63
PspGI CCWGG 2 cut(s) 59, 678
PspN4I GGNNCC 4 cut(s) 194, 474, 677, 1087
PsuI RGATCY 2 cut(s) 675, 1095
RsaI GTAC 3 cut(s) 83, 1022, 1087
RsaNI GTAC 3 cut(s) 82, 1021, 1086
RseI CAYNNNNRTG 1 cut(s) 519
SacI GAGCTC 1 cut(s) 312
SalI GTCGAC 2 cut(s) 23, 342
SaqAI TTAA 2 cut(s) 435, 876
Sau3AI GATC 7 cut(s) 39, 485, 675, 888, 1075, 1095, 1127
SchI GAGTC 1 cut(s) 923
ScrFI CCNGG 2 cut(s) 61, 680
SduI GDGCHC 1 cut(s) 312
SfcI CTRYAG 1 cut(s) 418
SfoI GGCGCC 1 cut(s) 194
SmiMI CAYNNNNRTG 1 cut(s) 519
SpeI ACTAGT 2 cut(s) 797, 811
Sse9I AATT 6 cut(s) 561, 774, 804, 826, 1024, 1056
SsiI CCGC 3 cut(s) 112, 571, 785
SspDI GGCGCC 1 cut(s) 192
SspMI CTAG 4 cut(s) 464, 798, 812, 1068
SstI GAGCTC 1 cut(s) 312
StyD4I CCNGG 2 cut(s) 59, 678
StyI CCWWGG 2 cut(s) 107, 447
TaaI ACNGT 3 cut(s) 11, 86, 1090
TaiI ACGT 3 cut(s) 24, 282, 570
TaqI TCGA 5 cut(s) 24, 312, 343, 455, 1126
TaqII GACCGA 1 cut(s) 264
TasI AATT 6 cut(s) 561, 774, 804, 826, 1024, 1056
TatI WGTACW 1 cut(s) 1020
Tru1I TTAA 2 cut(s) 435, 876
Tru9I TTAA 2 cut(s) 435, 876
TscAI CASTG 3 cut(s) 75, 310, 501
TseFI GTSAC 1 cut(s) 706
Tsp45I GTSAC 1 cut(s) 706
TspDTI ATGAA 5 cut(s) 564, 686, 879, 908, 1170
TspGWI ACGGA 1 cut(s) 918
TspRI CASTG 3 cut(s) 75, 310, 501
XmiI GTMKAC 2 cut(s) 24, 343
XspI CTAG 4 cut(s) 464, 798, 812, 1068
Zsp2I ATGCAT 1 cut(s) 839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.