MD03G1192800.v1.1

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000111
Physical Location & Seq
Forward (+)
26430918 .. 26433170
2253 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1192800.v1.1.491

Sequence Viewer

Length: 1218 bp
ATGAACGTGAGGCACGTGAAGGTGGAGTACCAGCTCACAGAAAGCCCTAATGTCCTTCCATCAGATATCATAATCAACATTCTCTCAAGGCTAGCGGTTAAGTCCTTATGCCGGTTTAAGTGTGTGTCAAAGCCGTGGCGTTCTCTTATCTCCGACCATGATTTTGTTAAAGTACACTTCAACAAAGCCTTTGAGTATAAAGATGTGATGCACCAAAGACGAAGGCTCGTATTTACTGGTGTTGAAAATCGATCCCTCTACTTTTCGTACCTTGACGAGTTTATCAATCGTGATGTATATCTTAATAATCGCGTCAATAACGTCGGTGATAATGGTTTAGTGACGGCTACTGAGCTCGCCTTTGTTTACAGCATAGAGCAAGATATTTTGGTTTCGTTAATTTGTTACTGCAATGGCTTATTGTTGTGCCAGTTACATGAAAGCAAGGAGTTACATTTGGTTAACCCCGCAACCAGGGAACTCAAGATACTACCAAGGACACCAAAACCATATCGCTATTCGAGCCTCTGTGGGTTCGGATATGATCACTCCACTGATGAACATAAGGTGGTCTGCGGGCGGATCAACATTAATCACGGAATCGAGTTTTGTGTCTATACATTAGAAACCAATTCGTGGCGGGTGATTCGCGACAACTTCAATTGTTTTGAATGTACTAAAGTACGCGGGATACATCTGAATGGCGAACTTCATTGGTTGATGCATAAGGGTGAATATGAAGCTGAGTCTTCCGTCATTGTATCTCTCGTCTTAGCAAAGGAGGAGGTTCGGGAAATTCAACTGTCTCCGGAATATTCCATCGAGAATAGCCCTCCAATCGAGCTAGGGCTATTCAGAGAATGGTTGTGCATATCACATAATGTCGACGCCGATCATGATCAAACGTACAATGAATTTTGGGTGATGAAGGAACATGGAGTTAAGGAGTCTTGGACCAAAATGAGAGTCTCCATCCCCTATCACAAATTGTCTCATTCTGGCTTTTGGACCAAAACTCATGATTTGATGGTAATTGGCGAAAGGTTACTAATGTACAATTTTGATGACGATGAAAACTTCTGGGATCTACCAATTCGTGGAGTTGACAAAGTTGGTATCATTTTGATCTACTTGGATAGCCTGGTTTCCCTTTCTAGAAATCAATCGAAAAGGAGTTCGAAGAAGACTTCGGCAAAGTGGAAACGGAGAGTGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

406

Amino Acids

47.44

Weight (kDa)

7.62

Isoelectric Point (pI)

39.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 18 - 53 1.8e-08 F-box-like
F-box PF00646 19 - 55 4.6e-10 F-box domain
FBA_1 PF07734 123 - 383 2.8e-27 F-box associated beta propeller domain
FBA_3 PF08268 125 - 330 1e-20 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 636, 1097
AccI GTMKAC 1 cut(s) 885
AccII CGCG 3 cut(s) 312, 651, 687
AccIII TCCGGA 1 cut(s) 808
AciI CCGC 6 cut(s) 95, 468, 576, 580, 640, 687
AclWI GGATC 3 cut(s) 246, 590, 1092
AcsI RAATTY 2 cut(s) 795, 914
AcvI CACGTG 1 cut(s) 16
AcyI GRCGYC 1 cut(s) 888
AfaI GTAC 7 cut(s) 29, 174, 269, 676, 684, 908, 1055
AfiI CCNNNNNNNGG 4 cut(s) 111, 474, 636, 1097
AgsI TTSAA 5 cut(s) 181, 245, 661, 671, 800
AjnI CCWGG 2 cut(s) 473, 1140
AluBI AGCT 4 cut(s) 34, 355, 743, 844
AluI AGCT 4 cut(s) 34, 355, 743, 844
Alw21I GWGCWC 1 cut(s) 357
Alw26I GTCTC 3 cut(s) 810, 973, 996
AlwI GGATC 3 cut(s) 246, 590, 1092
Aor13HI TCCGGA 1 cut(s) 808
ApoI RAATTY 2 cut(s) 795, 914
ArsI GACNNNNNNTTYG 4 cut(s) 146, 178, 951, 983
AseI ATTAAT 1 cut(s) 591
AspS9I GGNCC 2 cut(s) 954, 1008
AsuHPI GGTGA 4 cut(s) 338, 655, 743, 934
AsuII TTCGAA 1 cut(s) 1178
AsuNHI GCTAGC 1 cut(s) 91
AvaII GGWCC 2 cut(s) 954, 1008
BanII GRGCYC 1 cut(s) 357
BarI GAAGNNNNNNTAC 2 cut(s) 11, 43
BbrPI CACGTG 1 cut(s) 16
BbsI GAAGAC 2 cut(s) 741, 1190
Bbv12I GWGCWC 1 cut(s) 357
BccI CCATC 4 cut(s) 67, 827, 980, 1021
BceAI ACGGC 2 cut(s) 118, 360
BciT130I CCWGG 2 cut(s) 475, 1142
BciVI GTATCC 1 cut(s) 684
BclI TGATCA 2 cut(s) 544, 898
BcoDI GTCTC 3 cut(s) 810, 973, 996
BfaI CTAG 3 cut(s) 92, 845, 1155
BfuI GTATCC 1 cut(s) 684
Bme1390I CCNGG 2 cut(s) 475, 1142
Bme18I GGWCC 2 cut(s) 954, 1008
BmgT120I GGNCC 2 cut(s) 954, 1008
BmrFI CCNGG 2 cut(s) 475, 1142
BmsI GCATC 2 cut(s) 198, 711
BmtI GCTAGC 1 cut(s) 95
BpiI GAAGAC 2 cut(s) 741, 1190
Bpu14I TTCGAA 1 cut(s) 1178
BpuEI CTTGAG 2 cut(s) 70, 467
Bsa29I ATCGAT 1 cut(s) 250
BsaAI YACGTR 1 cut(s) 16
BsaBI GATNNNNATC 2 cut(s) 297, 897
BsaHI GRCGYC 1 cut(s) 888
BsaJI CCNNGG 3 cut(s) 134, 474, 494
BsaWI WCCGGW 1 cut(s) 808
Bsc4I CCNNNNNNNGG 4 cut(s) 111, 474, 636, 1097
Bse118I RCCGGY 1 cut(s) 111
Bse1I ACTGG 2 cut(s) 241, 430
Bse3DI GCAATG 1 cut(s) 418
Bse8I GATNNNNATC 2 cut(s) 297, 897
BseAI TCCGGA 1 cut(s) 808
BseBI CCWGG 2 cut(s) 475, 1142
BseCI ATCGAT 1 cut(s) 250
BseDI CCNNGG 3 cut(s) 134, 474, 494
BseGI GGATG 1 cut(s) 972
BseJI GATNNNNATC 2 cut(s) 297, 897
BseLI CCNNNNNNNGG 4 cut(s) 111, 474, 636, 1097
BseMI GCAATG 1 cut(s) 418
BseMII CTCAG 2 cut(s) 342, 735
BseNI ACTGG 2 cut(s) 241, 430
BseRI GAGGAG 1 cut(s) 797
Bsh1236I CGCG 3 cut(s) 312, 651, 687
BshVI ATCGAT 1 cut(s) 250
BsiHKAI GWGCWC 1 cut(s) 357
BsiSI CCGG 2 cut(s) 112, 809
BslI CCNNNNNNNGG 4 cut(s) 111, 474, 636, 1097
BsmAI GTCTC 3 cut(s) 810, 973, 996
Bsp119I TTCGAA 1 cut(s) 1178
Bsp1286I GDGCHC 1 cut(s) 357
Bsp13I TCCGGA 1 cut(s) 808
Bsp1407I TGTACA 1 cut(s) 1053
Bsp143I GATC 7 cut(s) 251, 544, 582, 892, 898, 1084, 1125
Bsp68I TCGCGA 1 cut(s) 651
BspACI CCGC 6 cut(s) 95, 468, 576, 580, 640, 687
BspCNI CTCAG 2 cut(s) 343, 736
BspDI ATCGAT 1 cut(s) 250
BspEI TCCGGA 1 cut(s) 808
BspFNI CGCG 3 cut(s) 312, 651, 687
BspHI TCATGA 2 cut(s) 895, 1018
BspOI GCTAGC 1 cut(s) 95
BspPI GGATC 3 cut(s) 246, 590, 1092
BspT104I TTCGAA 1 cut(s) 1178
BsrDI GCAATG 1 cut(s) 418
BsrFI RCCGGY 1 cut(s) 111
BsrGI TGTACA 1 cut(s) 1053
BsrI ACTGG 2 cut(s) 241, 430
BssAI RCCGGY 1 cut(s) 111
BssECI CCNNGG 3 cut(s) 134, 474, 494
BssMI GATC 7 cut(s) 251, 544, 582, 892, 898, 1084, 1125
BssNI GRCGYC 1 cut(s) 888
BssT1I CCWWGG 1 cut(s) 494
Bst2UI CCWGG 2 cut(s) 475, 1142
Bst4CI ACNGT 1 cut(s) 804
BstACI GRCGYC 1 cut(s) 888
BstAUI TGTACA 1 cut(s) 1053
BstBAI YACGTR 1 cut(s) 16
BstBI TTCGAA 1 cut(s) 1178
BstC8I GCNNGC 3 cut(s) 93, 357, 578
BstDEI CTNAG 3 cut(s) 351, 744, 772
BstDSI CCRYGG 1 cut(s) 134
BstF5I GGATG 1 cut(s) 972
BstFNI CGCG 3 cut(s) 312, 651, 687
BstKTI GATC 7 cut(s) 254, 547, 585, 895, 901, 1087, 1128
BstMAI GTCTC 3 cut(s) 810, 973, 996
BstMBI GATC 7 cut(s) 251, 544, 582, 892, 898, 1084, 1125
BstMWI GCNNNNNNNGC 1 cut(s) 522
BstNI CCWGG 2 cut(s) 475, 1142
BstSCI CCNGG 2 cut(s) 473, 1140
BstUI CGCG 3 cut(s) 312, 651, 687
BstV2I GAAGAC 2 cut(s) 741, 1190
BstX2I RGATCY 1 cut(s) 1084
BstYI RGATCY 1 cut(s) 1084
Bsu15I ATCGAT 1 cut(s) 250
BsuI GTATCC 1 cut(s) 684
BsuTUI ATCGAT 1 cut(s) 250
BtgI CCRYGG 1 cut(s) 134
BtsCI GGATG 1 cut(s) 972
BtsIMutI CAGTG 1 cut(s) 552
BtuMI TCGCGA 1 cut(s) 651
Cac8I GCNNGC 3 cut(s) 93, 357, 578
CciI TCATGA 2 cut(s) 895, 1018
Cfr10I RCCGGY 1 cut(s) 111
Cfr13I GGNCC 2 cut(s) 954, 1008
ClaI ATCGAT 1 cut(s) 250
CseI GACGC 2 cut(s) 301, 896
Csp6I GTAC 7 cut(s) 28, 173, 268, 675, 683, 907, 1054
CviAII CATG 5 cut(s) 158, 437, 896, 935, 1019
CviQI GTAC 7 cut(s) 28, 173, 268, 675, 683, 907, 1054
DdeI CTNAG 3 cut(s) 351, 744, 772
DpnI GATC 7 cut(s) 253, 546, 584, 894, 900, 1086, 1127
DpnII GATC 7 cut(s) 251, 544, 582, 892, 898, 1084, 1125
EciI GGCGGA 1 cut(s) 595
Ecl136II GAGCTC 1 cut(s) 355
Eco130I CCWWGG 1 cut(s) 494
Eco24I GRGCYC 1 cut(s) 357
Eco32I GATATC 1 cut(s) 67
Eco47I GGWCC 2 cut(s) 954, 1008
Eco53kI GAGCTC 1 cut(s) 355
Eco72I CACGTG 1 cut(s) 16
EcoICRI GAGCTC 1 cut(s) 355
EcoRII CCWGG 2 cut(s) 473, 1140
EcoRV GATATC 1 cut(s) 67
EcoT14I CCWWGG 1 cut(s) 494
EcoT22I ATGCAT 1 cut(s) 726
EcoT38I GRGCYC 1 cut(s) 357
ErhI CCWWGG 1 cut(s) 494
FaeI CATG 5 cut(s) 161, 440, 899, 938, 1022
FatI CATG 5 cut(s) 157, 436, 895, 934, 1018
FauI CCCGC 4 cut(s) 475, 569, 633, 680
FbaI TGATCA 2 cut(s) 544, 898
FblI GTMKAC 1 cut(s) 885
FokI GGATG 1 cut(s) 959
FriOI GRGCYC 1 cut(s) 357
FspBI CTAG 3 cut(s) 92, 845, 1155
HapII CCGG 2 cut(s) 112, 809
HgaI GACGC 2 cut(s) 301, 896
Hin1I GRCGYC 1 cut(s) 888
Hin1II CATG 5 cut(s) 161, 440, 899, 938, 1022
HincII GTYRAC 3 cut(s) 463, 886, 1105
HindII GTYRAC 3 cut(s) 463, 886, 1105
HinfI GANTC 5 cut(s) 600, 646, 746, 947, 966
HpaI GTTAAC 1 cut(s) 463
HpaII CCGG 2 cut(s) 112, 809
HphI GGTGA 4 cut(s) 338, 655, 743, 934
Hpy166II GTNNAC 5 cut(s) 175, 367, 463, 886, 1105
Hpy188I TCNGA 5 cut(s) 64, 154, 539, 699, 857
Hpy188III TCNNGA 9 cut(s) 290, 484, 650, 791, 809, 823, 896, 1019, 1155
Hpy8I GTNNAC 5 cut(s) 175, 367, 463, 886, 1105
Hpy99I CGWCG 2 cut(s) 326, 890
HpyAV CCTTC 4 cut(s) 13, 65, 216, 922
HpyCH4III ACNGT 1 cut(s) 804
HpyCH4IV ACGT 4 cut(s) 6, 15, 321, 905
HpyCH4V TGCA 4 cut(s) 211, 411, 724, 870
HpyF10VI GCNNNNNNNGC 1 cut(s) 522
HpyF3I CTNAG 3 cut(s) 351, 744, 772
HpySE526I ACGT 4 cut(s) 6, 15, 321, 905
Hsp92I GRCGYC 1 cut(s) 888
Hsp92II CATG 5 cut(s) 161, 440, 899, 938, 1022
Kpn2I TCCGGA 1 cut(s) 808
Ksp22I TGATCA 2 cut(s) 544, 898
KspAI GTTAAC 1 cut(s) 463
Kzo9I GATC 7 cut(s) 251, 544, 582, 892, 898, 1084, 1125
LweI GCATC 2 cut(s) 198, 711
MaeI CTAG 3 cut(s) 92, 845, 1155
MaeII ACGT 4 cut(s) 6, 15, 321, 905
MaeIII GTNAC 5 cut(s) 340, 404, 432, 450, 1044
MalI GATC 7 cut(s) 253, 546, 584, 894, 900, 1086, 1127
MboI GATC 7 cut(s) 251, 544, 582, 892, 898, 1084, 1125
MboII GAAGA 3 cut(s) 741, 1192, 1195
MfeI CAATTG 1 cut(s) 661
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 1 cut(s) 357
MluCI AATT 9 cut(s) 399, 631, 661, 795, 914, 986, 1032, 1057, 1092
MlyI GAGTC 3 cut(s) 755, 956, 975
MmeI TCCRAC 1 cut(s) 177
MnlI CCTC 6 cut(s) 3, 266, 536, 775, 778, 843
Mph1103I ATGCAT 1 cut(s) 726
MroI TCCGGA 1 cut(s) 808
MseI TTAA 8 cut(s) 99, 117, 168, 303, 398, 462, 591, 942
MslI CAYNNNNRTG 2 cut(s) 699, 729
MspI CCGG 2 cut(s) 112, 809
MspR9I CCNGG 2 cut(s) 475, 1142
MunI CAATTG 1 cut(s) 661
MvaI CCWGG 2 cut(s) 475, 1142
MvnI CGCG 3 cut(s) 312, 651, 687
MwoI GCNNNNNNNGC 1 cut(s) 522
NdeII GATC 7 cut(s) 251, 544, 582, 892, 898, 1084, 1125
NheI GCTAGC 1 cut(s) 91
NlaIII CATG 5 cut(s) 161, 440, 899, 938, 1022
NmuCI GTSAC 1 cut(s) 340
NruI TCGCGA 1 cut(s) 651
NsiI ATGCAT 1 cut(s) 726
NspV TTCGAA 1 cut(s) 1178
PagI TCATGA 2 cut(s) 895, 1018
PcsI WCGNNNNNNNCGW 1 cut(s) 12
PfeI GAWTC 2 cut(s) 600, 646
PflMI CCANNNNNTGG 2 cut(s) 636, 1097
PleI GAGTC 3 cut(s) 754, 955, 974
PmaCI CACGTG 1 cut(s) 16
PmlI CACGTG 1 cut(s) 16
PpsI GAGTC 3 cut(s) 754, 955, 974
Ppu21I YACGTR 1 cut(s) 16
PshBI ATTAAT 1 cut(s) 591
Psp124BI GAGCTC 1 cut(s) 357
Psp6I CCWGG 2 cut(s) 473, 1140
PspCI CACGTG 1 cut(s) 16
PspGI CCWGG 2 cut(s) 473, 1140
PspPI GGNCC 2 cut(s) 954, 1008
PsrI GAACNNNNNNTAC 2 cut(s) 471, 503
PsuI RGATCY 1 cut(s) 1084
RruI TCGCGA 1 cut(s) 651
RsaI GTAC 7 cut(s) 29, 174, 269, 676, 684, 908, 1055
RsaNI GTAC 7 cut(s) 28, 173, 268, 675, 683, 907, 1054
RseI CAYNNNNRTG 2 cut(s) 699, 729
SacI GAGCTC 1 cut(s) 357
SalI GTCGAC 1 cut(s) 884
SaqAI TTAA 8 cut(s) 99, 117, 168, 303, 398, 462, 591, 942
Sau3AI GATC 7 cut(s) 251, 544, 582, 892, 898, 1084, 1125
Sau96I GGNCC 2 cut(s) 954, 1008
SchI GAGTC 3 cut(s) 755, 956, 975
ScrFI CCNGG 2 cut(s) 475, 1142
SduI GDGCHC 1 cut(s) 357
SfaNI GCATC 2 cut(s) 198, 711
SfuI TTCGAA 1 cut(s) 1178
SinI GGWCC 2 cut(s) 954, 1008
SmiMI CAYNNNNRTG 2 cut(s) 699, 729
SmlI CTYRAG 2 cut(s) 85, 482
SmoI CTYRAG 2 cut(s) 85, 482
Sse9I AATT 9 cut(s) 399, 631, 661, 795, 914, 986, 1032, 1057, 1092
SsiI CCGC 6 cut(s) 95, 468, 576, 580, 640, 687
SspI AATATT 1 cut(s) 815
SspMI CTAG 3 cut(s) 92, 845, 1155
SstI GAGCTC 1 cut(s) 357
StyD4I CCNGG 2 cut(s) 473, 1140
StyI CCWWGG 1 cut(s) 494
TaaI ACNGT 1 cut(s) 804
TaiI ACGT 4 cut(s) 9, 18, 324, 908
TaqI TCGA 8 cut(s) 250, 521, 603, 822, 840, 885, 1166, 1178
TasI AATT 9 cut(s) 399, 631, 661, 795, 914, 986, 1032, 1057, 1092
TatI WGTACW 3 cut(s) 172, 674, 1053
TfiI GAWTC 2 cut(s) 600, 646
Tru1I TTAA 8 cut(s) 99, 117, 168, 303, 398, 462, 591, 942
Tru9I TTAA 8 cut(s) 99, 117, 168, 303, 398, 462, 591, 942
TscAI CASTG 1 cut(s) 559
TseFI GTSAC 1 cut(s) 340
Tsp45I GTSAC 1 cut(s) 340
TspDTI ATGAA 8 cut(s) 17, 453, 573, 701, 753, 927, 941, 1086
TspGWI ACGGA 2 cut(s) 612, 742
TspRI CASTG 1 cut(s) 559
Van91I CCANNNNNTGG 2 cut(s) 636, 1097
VpaK11BI GGWCC 2 cut(s) 954, 1008
VspI ATTAAT 1 cut(s) 591
XapI RAATTY 2 cut(s) 795, 914
XbaI TCTAGA 1 cut(s) 1154
XmiI GTMKAC 1 cut(s) 885
XspI CTAG 3 cut(s) 92, 845, 1155
Zsp2I ATGCAT 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.