Rroxscaffold_3G00229360

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000111
Physical Location & Seq
Forward (+)
13831275 .. 13836934
5660 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00229360.1

Sequence Viewer

Length: 1248 bp
ATGGCGGACCAACTGACAAAGGTCTGCCGTAGCTTGCCGTCGGAGATCATACGCGAGATTCTTTCGCGATTGCCGGTCAAGTCTTTATGCCGCTTCAGGTGTGTATCAAAGTCCTGGCTTTCGCTAATCCTAGACCCCCAATTTGTGAAGATGCATTTCAACAAAGCCATTGAGAATGAGCATCTGTTTTACCAAAGAAGAAAACTGTTATTCACTGATGAAAAAGGTGATTCACTTTACTCTTTCGACCTCGATGAGTTTCTTAATCATTATCATGATCATCCATTTCTGAATGGTCTTGGTAACTGTAACAATGTTAATGTTGGTGTCATTGGTGATGATTATGATGGTGATCTAGTTGTCACTGGACTCAAACTACCCAGTTGTGTTGGGGTCGCTACATATCCCAGTGAGACCTTGGTGTCTTTCTGCTGTGGCCTAGTGTTATTTAGGTTGGGTTCCGAGTTATATGTGGCCAACCCAGCAATAAGGAAATACAAGAAACTGCCAGCTCCAACTGCAGAGTTGGGTCTTGGACCCTTCATCTGTTACCAATTTGGGTTCGGTTTTGATCACACAACTGATGATTTCAAGGTGATTAAATCGACGTCCTGGTATAATGGAGTGGATTTTATTGTCTATGCATTCAAAACTGGTTCCTGGCGACAAATTCAAAGGCGATTGCCCTACATAAATTTTAGTCCTCGTACTGGGATAATGCTTAATGGAAGACTTCATTGTATGATGTGGAGCCTGAAAGGTAACTCATGGGTGATTGTATCTCTCTCTTTAGCAGAAGAGGAGGTTCAGGAAATTCCACTGCCGCTTGATTTAGATGTGACAATCTTGGATGACATGGAATTGGGACTGTTCTTCAAAGACAGCCTCTGTATAATTTATCCAGTTAGCACTGATAGGGTAGGTAAAGATAGAGCAACAAGTAAAAATGATTTTTGGGTTATGAAGGAATATGGGGAGGCGAAGTCTTGGACTAAAAGAGAATTCTTCTCTGACTATGACCCTTCTTTATTGCCTTCCGGTTACTGGAAAGAAAATCATGTTCTCTTCCGGTCCCGTACCAGTGCTGCGTTGGGAATGCACAATTTCAATGATTTTAGCTGTCAAGGTCTATCCATTCCTGGATATCCTAAAGTTAGGGGGGCTGGTTTCTACTTGGAGAGCCTTGTTTCACTGGATGATCATTGCGATTTTAATGAGCATATCCAGCATGAGAGGAATCTTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

415

Amino Acids

47.52

Weight (kDa)

6.07

Isoelectric Point (pI)

36.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 48 9e-12 F-box domain
F-box-like PF12937 11 - 48 1.4e-09 F-box-like
FBA_3 PF08268 140 - 337 4.8e-16 F-box associated beta propeller domain
FBA_1 PF07734 142 - 337 4.1e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 421
AatII GACGTC 1 cut(s) 611
AccII CGCG 2 cut(s) 54, 67
AciI CCGC 3 cut(s) 5, 91, 824
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 4 cut(s) 669, 694, 813, 1001
AcuI CTGAAG 1 cut(s) 79
AcyI GRCGYC 1 cut(s) 608
AfaI GTAC 2 cut(s) 709, 1078
AfiI CCNNNNNNNGG 2 cut(s) 710, 1044
AgsI TTSAA 6 cut(s) 160, 592, 649, 674, 877, 1108
AjnI CCWGG 4 cut(s) 113, 611, 659, 1138
AluBI AGCT 4 cut(s) 33, 512, 1119, 1245
AluI AGCT 4 cut(s) 33, 512, 1119, 1245
Alw26I GTCTC 1 cut(s) 407
AlwNI CAGNNNCTG 1 cut(s) 888
AoxI GGCC 2 cut(s) 436, 474
ApeKI GCWGC 1 cut(s) 1085
ApoI RAATTY 4 cut(s) 669, 694, 813, 1001
ArsI GACNNNNNNTTYG 2 cut(s) 125, 157
AspS9I GGNCC 3 cut(s) 7, 536, 1071
AsuHPI GGTGA 5 cut(s) 239, 347, 362, 607, 784
AvaII GGWCC 3 cut(s) 7, 536, 1071
BalI TGGCCA 1 cut(s) 476
BbsI GAAGAC 1 cut(s) 736
BbvI GCAGC 1 cut(s) 1072
BccI CCATC 1 cut(s) 341
BceAI ACGGC 2 cut(s) 12, 22
BciT130I CCWGG 4 cut(s) 115, 613, 661, 1140
BclI TGATCA 3 cut(s) 277, 571, 1198
BcoDI GTCTC 1 cut(s) 407
BfaI CTAG 3 cut(s) 131, 356, 440
BfmI CTRYAG 1 cut(s) 519
BisI GCNGC 3 cut(s) 91, 824, 1086
BlsI GCNGC 3 cut(s) 92, 825, 1087
Bme1390I CCNGG 4 cut(s) 115, 613, 661, 1140
Bme18I GGWCC 3 cut(s) 7, 536, 1071
BmgT120I GGNCC 3 cut(s) 7, 536, 1071
BmiI GGNNCC 5 cut(s) 460, 538, 658, 752, 1073
BmrFI CCNGG 4 cut(s) 115, 613, 661, 1140
BmrI ACTGGG 3 cut(s) 375, 402, 720
BmsI GCATC 2 cut(s) 141, 190
BmuI ACTGGG 3 cut(s) 375, 402, 720
BoxI GACNNNNGTC 1 cut(s) 20
BpiI GAAGAC 1 cut(s) 736
BsaBI GATNNNNATC 1 cut(s) 351
BsaHI GRCGYC 1 cut(s) 608
BsaI GGTCTC 1 cut(s) 407
BsaJI CCNNGG 1 cut(s) 417
BsaWI WCCGGW 2 cut(s) 1037, 1068
BsaXI ACNNNNNCTCC 2 cut(s) 968, 998
Bsc4I CCNNNNNNNGG 2 cut(s) 710, 1044
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 9 cut(s) 370, 381, 408, 658, 715, 902, 1049, 1080, 1197
Bse3DI GCAATG 1 cut(s) 1201
Bse8I GATNNNNATC 1 cut(s) 351
BseBI CCWGG 4 cut(s) 115, 613, 661, 1140
BseDI CCNNGG 1 cut(s) 417
BseGI GGATG 3 cut(s) 280, 856, 1201
BseJI GATNNNNATC 1 cut(s) 351
BseLI CCNNNNNNNGG 2 cut(s) 710, 1044
BseMI GCAATG 1 cut(s) 1201
BseNI ACTGG 9 cut(s) 370, 381, 408, 658, 715, 902, 1049, 1080, 1197
BseRI GAGGAG 1 cut(s) 815
BseXI GCAGC 1 cut(s) 1072
BseYI CCCAGC 1 cut(s) 481
Bsh1236I CGCG 2 cut(s) 54, 67
BshFI GGCC 2 cut(s) 438, 476
BsiSI CCGG 3 cut(s) 74, 1038, 1069
BslFI GGGAC 2 cut(s) 879, 1057
BslI CCNNNNNNNGG 2 cut(s) 710, 1044
BsmAI GTCTC 1 cut(s) 407
BsmFI GGGAC 2 cut(s) 879, 1057
BsmI GAATGC 2 cut(s) 644, 1101
BsnI GGCC 2 cut(s) 438, 476
Bso31I GGTCTC 1 cut(s) 407
Bsp143I GATC 5 cut(s) 45, 277, 352, 571, 1198
Bsp68I TCGCGA 1 cut(s) 67
BspACI CCGC 3 cut(s) 5, 91, 824
BspANI GGCC 2 cut(s) 438, 476
BspFNI CGCG 2 cut(s) 54, 67
BspHI TCATGA 1 cut(s) 274
BspLI GGNNCC 5 cut(s) 460, 538, 658, 752, 1073
BspMAI CTGCAG 1 cut(s) 523
BspTNI GGTCTC 1 cut(s) 407
BsrDI GCAATG 1 cut(s) 1201
BsrFI RCCGGY 1 cut(s) 73
BsrI ACTGG 9 cut(s) 370, 381, 408, 658, 715, 902, 1049, 1080, 1197
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 1 cut(s) 417
BssMI GATC 5 cut(s) 45, 277, 352, 571, 1198
BssNI GRCGYC 1 cut(s) 608
BssT1I CCWWGG 1 cut(s) 417
Bst2UI CCWGG 4 cut(s) 115, 613, 661, 1140
Bst4CI ACNGT 3 cut(s) 207, 308, 870
Bst6I CTCTTC 2 cut(s) 792, 1070
BstACI GRCGYC 1 cut(s) 608
BstC8I GCNNGC 2 cut(s) 35, 510
BstDEI CTNAG 1 cut(s) 1241
BstF5I GGATG 3 cut(s) 280, 856, 1201
BstFNI CGCG 2 cut(s) 54, 67
BstKTI GATC 5 cut(s) 48, 280, 355, 574, 1201
BstMAI GTCTC 1 cut(s) 407
BstMBI GATC 5 cut(s) 45, 277, 352, 571, 1198
BstMWI GCNNNNNNNGC 3 cut(s) 482, 518, 1225
BstNI CCWGG 4 cut(s) 115, 613, 661, 1140
BstPAI GACNNNNGTC 1 cut(s) 20
BstSCI CCNGG 4 cut(s) 113, 611, 659, 1138
BstSFI CTRYAG 1 cut(s) 519
BstUI CGCG 2 cut(s) 54, 67
BstV1I GCAGC 1 cut(s) 1072
BstV2I GAAGAC 1 cut(s) 736
BsuRI GGCC 2 cut(s) 438, 476
BtsCI GGATG 3 cut(s) 280, 856, 1201
BtsI GCAGTG 1 cut(s) 818
BtsIMutI CAGTG 7 cut(s) 213, 363, 415, 818, 909, 1087, 1190
BtuMI TCGCGA 1 cut(s) 67
Cac8I GCNNGC 2 cut(s) 35, 510
CaiI CAGNNNCTG 1 cut(s) 888
CciI TCATGA 1 cut(s) 274
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 3 cut(s) 7, 536, 1071
Csp6I GTAC 2 cut(s) 708, 1077
CviAII CATG 5 cut(s) 275, 768, 856, 1058, 1229
CviQI GTAC 2 cut(s) 708, 1077
DdeI CTNAG 1 cut(s) 1241
DpnI GATC 5 cut(s) 47, 279, 354, 573, 1200
DpnII GATC 5 cut(s) 45, 277, 352, 571, 1198
DrdI GACNNNNNNGTC 1 cut(s) 421
DseDI GACNNNNNNGTC 1 cut(s) 421
EaeI YGGCCR 1 cut(s) 474
Eam1104I CTCTTC 2 cut(s) 792, 1070
EarI CTCTTC 2 cut(s) 792, 1070
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 417
Eco31I GGTCTC 1 cut(s) 407
Eco32I GATATC 1 cut(s) 1145
Eco47I GGWCC 3 cut(s) 7, 536, 1071
Eco57I CTGAAG 1 cut(s) 79
EcoRI GAATTC 1 cut(s) 1001
EcoRII CCWGG 4 cut(s) 113, 611, 659, 1138
EcoRV GATATC 1 cut(s) 1145
EcoT14I CCWWGG 1 cut(s) 417
EcoT22I ATGCAT 2 cut(s) 156, 646
ErhI CCWWGG 1 cut(s) 417
FaeI CATG 5 cut(s) 278, 771, 859, 1061, 1232
FaqI GGGAC 2 cut(s) 879, 1057
FatI CATG 5 cut(s) 274, 767, 855, 1057, 1228
FbaI TGATCA 3 cut(s) 277, 571, 1198
Fnu4HI GCNGC 3 cut(s) 91, 824, 1086
FokI GGATG 3 cut(s) 267, 863, 1208
Fsp4HI GCNGC 3 cut(s) 91, 824, 1086
FspBI CTAG 3 cut(s) 131, 356, 440
GluI GCNGC 3 cut(s) 91, 824, 1086
GsaI CCCAGC 1 cut(s) 485
HaeIII GGCC 2 cut(s) 438, 476
HapII CCGG 3 cut(s) 74, 1038, 1069
Hin1I GRCGYC 1 cut(s) 608
Hin1II CATG 5 cut(s) 278, 771, 859, 1061, 1232
HinfI GANTC 4 cut(s) 58, 230, 369, 1237
HpaII CCGG 3 cut(s) 74, 1038, 1069
HphI GGTGA 5 cut(s) 239, 347, 362, 607, 784
Hpy188I TCNGA 4 cut(s) 43, 291, 463, 1012
Hpy188III TCNNGA 3 cut(s) 66, 275, 809
Hpy99I CGWCG 2 cut(s) 43, 610
HpyAV CCTTC 4 cut(s) 550, 958, 1032, 1044
HpyCH4III ACNGT 3 cut(s) 207, 308, 870
HpyCH4IV ACGT 1 cut(s) 608
HpyCH4V TGCA 4 cut(s) 154, 521, 644, 1099
HpyF10VI GCNNNNNNNGC 3 cut(s) 482, 518, 1225
HpyF3I CTNAG 1 cut(s) 1241
HpySE526I ACGT 1 cut(s) 608
Hsp92I GRCGYC 1 cut(s) 608
Hsp92II CATG 5 cut(s) 278, 771, 859, 1061, 1232
Ksp22I TGATCA 3 cut(s) 277, 571, 1198
Kzo9I GATC 5 cut(s) 45, 277, 352, 571, 1198
LmnI GCTCC 2 cut(s) 517, 750
Lsp1109I GCAGC 1 cut(s) 1072
LweI GCATC 2 cut(s) 141, 190
MaeI CTAG 3 cut(s) 131, 356, 440
MaeII ACGT 1 cut(s) 608
MaeIII GTNAC 7 cut(s) 302, 308, 361, 548, 761, 838, 1040
MalI GATC 5 cut(s) 47, 279, 354, 573, 1200
MboI GATC 5 cut(s) 45, 277, 352, 571, 1198
MboII GAAGA 7 cut(s) 160, 210, 741, 809, 865, 997, 1057
MlsI TGGCCA 1 cut(s) 476
MluCI AATT 9 cut(s) 140, 554, 669, 694, 813, 860, 894, 1001, 1102
MluNI TGGCCA 1 cut(s) 476
MlyI GAGTC 1 cut(s) 363
MmeI TCCRAC 2 cut(s) 21, 539
MnlI CCTC 7 cut(s) 260, 714, 793, 796, 896, 970, 1227
Mox20I TGGCCA 1 cut(s) 476
Mph1103I ATGCAT 2 cut(s) 156, 646
MscI TGGCCA 1 cut(s) 476
MseI TTAA 5 cut(s) 264, 318, 600, 723, 1212
MslI CAYNNNNRTG 1 cut(s) 273
Msp20I TGGCCA 1 cut(s) 476
MspI CCGG 3 cut(s) 74, 1038, 1069
MspR9I CCNGG 4 cut(s) 115, 613, 661, 1140
Mva1269I GAATGC 2 cut(s) 644, 1101
MvaI CCWGG 4 cut(s) 115, 613, 661, 1140
MvnI CGCG 2 cut(s) 54, 67
MwoI GCNNNNNNNGC 3 cut(s) 482, 518, 1225
NdeII GATC 5 cut(s) 45, 277, 352, 571, 1198
NlaIII CATG 5 cut(s) 278, 771, 859, 1061, 1232
NlaIV GGNNCC 5 cut(s) 460, 538, 658, 752, 1073
NmuCI GTSAC 2 cut(s) 361, 838
NruI TCGCGA 1 cut(s) 67
NsiI ATGCAT 2 cut(s) 156, 646
PagI TCATGA 1 cut(s) 274
PctI GAATGC 2 cut(s) 644, 1101
PfeI GAWTC 3 cut(s) 58, 230, 1237
PfoI TCCNGGA 1 cut(s) 1138
PkrI GCNGC 3 cut(s) 92, 825, 1087
PleI GAGTC 1 cut(s) 363
PpsI GAGTC 1 cut(s) 363
PshAI GACNNNNGTC 1 cut(s) 20
Psp6I CCWGG 4 cut(s) 113, 611, 659, 1138
PspFI CCCAGC 1 cut(s) 481
PspGI CCWGG 4 cut(s) 113, 611, 659, 1138
PspN4I GGNNCC 5 cut(s) 460, 538, 658, 752, 1073
PspPI GGNCC 3 cut(s) 7, 536, 1071
PstI CTGCAG 1 cut(s) 523
PstNI CAGNNNCTG 1 cut(s) 888
RruI TCGCGA 1 cut(s) 67
RsaI GTAC 2 cut(s) 709, 1078
RsaNI GTAC 2 cut(s) 708, 1077
RseI CAYNNNNRTG 1 cut(s) 273
SaqAI TTAA 5 cut(s) 264, 318, 600, 723, 1212
SatI GCNGC 3 cut(s) 91, 824, 1086
Sau3AI GATC 5 cut(s) 45, 277, 352, 571, 1198
Sau96I GGNCC 3 cut(s) 7, 536, 1071
SchI GAGTC 1 cut(s) 363
ScrFI CCNGG 4 cut(s) 115, 613, 661, 1140
SfaNI GCATC 2 cut(s) 141, 190
SfcI CTRYAG 1 cut(s) 519
SinI GGWCC 3 cut(s) 7, 536, 1071
SmiMI CAYNNNNRTG 1 cut(s) 273
Sse9I AATT 9 cut(s) 140, 554, 669, 694, 813, 860, 894, 1001, 1102
SsiI CCGC 3 cut(s) 5, 91, 824
SspMI CTAG 3 cut(s) 131, 356, 440
StyD4I CCNGG 4 cut(s) 113, 611, 659, 1138
StyI CCWWGG 1 cut(s) 417
TaaI ACNGT 3 cut(s) 207, 308, 870
TaiI ACGT 1 cut(s) 611
TaqI TCGA 3 cut(s) 246, 252, 605
TasI AATT 9 cut(s) 140, 554, 669, 694, 813, 860, 894, 1001, 1102
TauI GCSGC 2 cut(s) 93, 826
TfiI GAWTC 3 cut(s) 58, 230, 1237
Tru1I TTAA 5 cut(s) 264, 318, 600, 723, 1212
Tru9I TTAA 5 cut(s) 264, 318, 600, 723, 1212
TscAI CASTG 7 cut(s) 220, 370, 415, 825, 916, 1087, 1197
TseFI GTSAC 2 cut(s) 361, 838
TseI GCWGC 1 cut(s) 1085
Tsp45I GTSAC 2 cut(s) 361, 838
TspDTI ATGAA 4 cut(s) 234, 532, 725, 977
TspRI CASTG 7 cut(s) 220, 370, 415, 825, 916, 1087, 1197
VpaK11BI GGWCC 3 cut(s) 7, 536, 1071
XapI RAATTY 4 cut(s) 669, 694, 813, 1001
XcmI CCANNNNNNNNNTGG 2 cut(s) 415, 1087
XspI CTAG 3 cut(s) 131, 356, 440
ZraI GACGTC 1 cut(s) 609
Zsp2I ATGCAT 2 cut(s) 156, 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.