Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000111

Physical Location & Seq

Genomic Coordinates Forward (+)

84114467 .. 84119426

Gene Structure 4960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG616800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGGCAGCAATAGCAATCGCGAGAGCAAGCGTGGTTCCGATGAACCGACCGGTTCAGGGCGGCGGCAAGGTGCTGAAGGAGAAGCTGGAGTTTGTGCCGTCGGATGATATAGAGCCGATCATGAGCTTCGATCAGATGAACCTCAAGGACGAGCTCCTCCGAGGCATCTACAACTATGGCTTCGAGAAGCCCTCCGCCATCCAGCAAAGGGCTATCAGACCCATAATCGAGGGCCGCGACGTCATAGCTCAGGCTCAATCTGGCACTGGAAAGACCTCCATGATTGCCCTAGCTTCTTGCCAAACCGTCGACACCTCCTCCAGAGAGGTTCAGGTGTTGATATTGTCTCCAACGAGGGAATTGGCTGCACAGACAGAGAAAGTGATACTGGCAATGGGAAACTACATGAGTATTCAAGCGCATTCCTGCATTGGAGGCAAAAGCGTGGGTGAGGATATCAGAAAGCTAGAGAACGGAGTTCAGGTGGTGTCTGGAACTCCCGACCAGTTCCTCAACCATAACTATAACGATGATGATGACAATGCACTGGTTCTTAAGAATCGCCATGTTCATGCAGATAATAATTATGATGGTTTGATACCAGCCACCGAGTTCGATTTTGTTTCTGCAGAAGGACGTAGACCCATATACGTCATCTACTCCTGCAATAACTTGGTGTTGTGCGATATGAGGTGTTATTTGGTTAACCCTGCAACCAGGGAGATGAAGAAAGTACCAAAGACACTGTCATGGAGACCTATGTCGATGCTCTTGTGGTTGAGCTTGTGTGGATTTGGATTTGATTCCTCCACCATTGAGTACAAGGTGGTTAACGGCCAGGTCTATACTGATGGAATCGAGTTTAGTGTCTATAGTTATACACTGAAAAATGATTCTTGGCGAAAGATCGAGTGCCTCTGTTCCTACTATCCTGATTGGTTTCGTGGGATTTTTCTGAATGGAGCTGTTCATTGGTCGGCAACGACAGTTGGAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009628 GO:0009987 GO:0010467 GO:0010468 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0035145 GO:0036293 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070482 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03040 map03013 map03015 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

332

Amino Acids

37.08

Weight (kDa)

5.64

Isoelectric Point (pI)

38.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	64 - 174	7.5e-06	Type III restriction enzyme, res subunit
DEAD	PF00270	66 - 174	1.2e-26	DEAD/DEAH box helicase
FBA_1	PF07734	215 - 328	2.6e-09	F-box associated beta propeller domain
FBA_3	PF08268	230 - 329	3.1e-08	F-box associated beta propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06240
fragaria_vesca	FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica	MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica	Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis	pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis	RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata	RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora	Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii	Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa	Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha	Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana	Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	243
AccI	GTMKAC	2 cut(s)	309, 640
AccII	CGCG	2 cut(s)	20, 237
AciI	CCGC	4 cut(s)	60, 63, 195, 235
AcoI	YGGCCR	1 cut(s)	835
AcuI	CTGAAG	1 cut(s)	95
AcyI	GRCGYC	1 cut(s)	240
AfaI	GTAC	2 cut(s)	735, 821
AfiI	CCNNNNNNNGG	2 cut(s)	56, 208
AflII	CTTAAG	1 cut(s)	554
AgeI	ACCGGT	1 cut(s)	49
AgsI	TTSAA	1 cut(s)	416
AjnI	CCWGG	2 cut(s)	716, 837
AluBI	AGCT	8 cut(s)	85, 126, 154, 248, 293, 466, 783, 965
AluI	AGCT	8 cut(s)	85, 126, 154, 248, 293, 466, 783, 965
Alw21I	GWGCWC	1 cut(s)	156
Alw26I	GTCTC	2 cut(s)	351, 748
AoxI	GGCC	2 cut(s)	232, 835
ApeKI	GCWGC	2 cut(s)	5, 365
ArsI	GACNNNNNNTTYG	2 cut(s)	731, 763
AsiGI	ACCGGT	1 cut(s)	49
AspLEI	GCGC	1 cut(s)	421
AspS9I	GGNCC	1 cut(s)	232
AsuHPI	GGTGA	1 cut(s)	461
BanII	GRGCYC	1 cut(s)	156
Bbv12I	GWGCWC	1 cut(s)	156
BbvI	GCAGC	2 cut(s)	17, 352
BccI	CCATC	3 cut(s)	206, 584, 845
BceAI	ACGGC	2 cut(s)	82, 850
BciT130I	CCWGG	2 cut(s)	718, 839
BcoDI	GTCTC	2 cut(s)	351, 748
BfaI	CTAG	2 cut(s)	290, 467
BfmI	CTRYAG	2 cut(s)	627, 871
BfrI	CTTAAG	1 cut(s)	554
BisI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
BlsI	GCNGC	5 cut(s)	7, 62, 65, 236, 367
Bme1390I	CCNGG	2 cut(s)	718, 839
BmgT120I	GGNCC	1 cut(s)	232
BmiI	GGNNCC	1 cut(s)	36
BmrFI	CCNGG	2 cut(s)	718, 839
BmsI	GCATC	2 cut(s)	174, 756
BoxI	GACNNNNGTC	1 cut(s)	760
BplI	GAGNNNNNCTC	2 cut(s)	176, 208
BpmI	CTGGAG	2 cut(s)	107, 304
Bpu10I	CCTNAGC	1 cut(s)	249
BpuEI	CTTGAG	1 cut(s)	128
BsaHI	GRCGYC	1 cut(s)	240
BsaI	GGTCTC	1 cut(s)	748
BsaJI	CCNNGG	2 cut(s)	160, 717
BsaWI	WCCGGW	1 cut(s)	49
BsaXI	ACNNNNNCTCC	4 cut(s)	302, 332, 468, 498
Bsc4I	CCNNNNNNNGG	2 cut(s)	56, 208
Bse118I	RCCGGY	1 cut(s)	49
Bse1I	ACTGG	4 cut(s)	271, 393, 505, 552
Bse3DI	GCAATG	1 cut(s)	399
BseBI	CCWGG	2 cut(s)	718, 839
BseDI	CCNNGG	2 cut(s)	160, 717
BseGI	GGATG	2 cut(s)	109, 198
BseLI	CCNNNNNNNGG	2 cut(s)	56, 208
BseMI	GCAATG	1 cut(s)	399
BseMII	CTCAG	1 cut(s)	263
BseNI	ACTGG	4 cut(s)	271, 393, 505, 552
BseRI	GAGGAG	2 cut(s)	146, 307
BseXI	GCAGC	2 cut(s)	17, 352
BsgI	GTGCAG	1 cut(s)	351
Bsh1236I	CGCG	2 cut(s)	20, 237
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	2 cut(s)	234, 837
BshTI	ACCGGT	1 cut(s)	49
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	1 cut(s)	156
BsiSI	CCGG	1 cut(s)	50
BslI	CCNNNNNNNGG	2 cut(s)	56, 208
BsmAI	GTCTC	2 cut(s)	351, 748
BsmI	GAATGC	1 cut(s)	421
BsnI	GGCC	2 cut(s)	234, 837
Bso31I	GGTCTC	1 cut(s)	748
Bsp1286I	GDGCHC	1 cut(s)	156
Bsp143I	GATC	3 cut(s)	117, 130, 906
Bsp68I	TCGCGA	1 cut(s)	20
BspACI	CCGC	4 cut(s)	60, 63, 195, 235
BspANI	GGCC	2 cut(s)	234, 837
BspCNI	CTCAG	1 cut(s)	262
BspFNI	CGCG	2 cut(s)	20, 237
BspHI	TCATGA	1 cut(s)	120
BspLI	GGNNCC	1 cut(s)	36
BspMAI	CTGCAG	1 cut(s)	631
BspTI	CTTAAG	1 cut(s)	554
BspTNI	GGTCTC	1 cut(s)	748
BsrDI	GCAATG	1 cut(s)	399
BsrFI	RCCGGY	1 cut(s)	49
BsrI	ACTGG	4 cut(s)	271, 393, 505, 552
BssAI	RCCGGY	1 cut(s)	49
BssECI	CCNNGG	2 cut(s)	160, 717
BssMI	GATC	3 cut(s)	117, 130, 906
BssNI	GRCGYC	1 cut(s)	240
Bst2UI	CCWGG	2 cut(s)	718, 839
Bst4CI	ACNGT	3 cut(s)	307, 747, 988
BstACI	GRCGYC	1 cut(s)	240
BstAFI	CTTAAG	1 cut(s)	554
BstC8I	GCNNGC	1 cut(s)	28
BstDEI	CTNAG	1 cut(s)	249
BstF5I	GGATG	2 cut(s)	109, 198
BstFNI	CGCG	2 cut(s)	20, 237
BstHHI	GCGC	1 cut(s)	421
BstKTI	GATC	3 cut(s)	120, 133, 909
BstMAI	GTCTC	2 cut(s)	351, 748
BstMBI	GATC	3 cut(s)	117, 130, 906
BstMCI	CGRYCG	1 cut(s)	50
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 435
BstNI	CCWGG	2 cut(s)	718, 839
BstPAI	GACNNNNGTC	1 cut(s)	760
BstSCI	CCNGG	2 cut(s)	716, 837
BstSFI	CTRYAG	2 cut(s)	627, 871
BstUI	CGCG	2 cut(s)	20, 237
BstV1I	GCAGC	2 cut(s)	17, 352
BsuRI	GGCC	2 cut(s)	234, 837
BtsCI	GGATG	2 cut(s)	109, 198
BtsIMutI	CAGTG	4 cut(s)	264, 545, 743, 881
BtuMI	TCGCGA	1 cut(s)	20
Cac8I	GCNNGC	1 cut(s)	28
CciI	TCATGA	1 cut(s)	120
CfoI	GCGC	1 cut(s)	421
Cfr10I	RCCGGY	1 cut(s)	49
Cfr13I	GGNCC	1 cut(s)	232
Csp6I	GTAC	2 cut(s)	734, 820
CspAI	ACCGGT	1 cut(s)	49
CviAII	CATG	6 cut(s)	121, 280, 406, 566, 572, 750
CviQI	GTAC	2 cut(s)	734, 820
DdeI	CTNAG	1 cut(s)	249
DpnI	GATC	3 cut(s)	119, 132, 908
DpnII	GATC	3 cut(s)	117, 130, 906
EaeI	YGGCCR	1 cut(s)	835
EciI	GGCGGA	1 cut(s)	184
Ecl136II	GAGCTC	1 cut(s)	154
Eco24I	GRGCYC	1 cut(s)	156
Eco31I	GGTCTC	1 cut(s)	748
Eco32I	GATATC	1 cut(s)	457
Eco53kI	GAGCTC	1 cut(s)	154
Eco57I	CTGAAG	1 cut(s)	95
EcoICRI	GAGCTC	1 cut(s)	154
EcoRII	CCWGG	2 cut(s)	716, 837
EcoRV	GATATC	1 cut(s)	457
EcoT38I	GRGCYC	1 cut(s)	156
FaeI	CATG	6 cut(s)	124, 283, 409, 569, 575, 753
FatI	CATG	6 cut(s)	120, 279, 405, 565, 571, 749
FblI	GTMKAC	2 cut(s)	309, 640
Fnu4HI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
FokI	GGATG	2 cut(s)	116, 185
FriOI	GRGCYC	1 cut(s)	156
Fsp4HI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
FspBI	CTAG	2 cut(s)	290, 467
GlaI	GCGC	1 cut(s)	420
GluI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
GsuI	CTGGAG	2 cut(s)	107, 304
HaeIII	GGCC	2 cut(s)	234, 837
HapII	CCGG	1 cut(s)	50
HhaI	GCGC	1 cut(s)	421
Hin1I	GRCGYC	1 cut(s)	240
Hin1II	CATG	6 cut(s)	124, 283, 409, 569, 575, 753
Hin6I	GCGC	1 cut(s)	419
HinP1I	GCGC	1 cut(s)	419
HincII	GTYRAC	3 cut(s)	310, 706, 832
HindII	GTYRAC	3 cut(s)	310, 706, 832
HinfI	GANTC	4 cut(s)	559, 803, 855, 893
HpaI	GTTAAC	2 cut(s)	706, 832
HpaII	CCGG	1 cut(s)	50
HphI	GGTGA	1 cut(s)	461
Hpy166II	GTNNAC	4 cut(s)	310, 641, 706, 832
Hpy188I	TCNGA	7 cut(s)	39, 103, 135, 161, 218, 461, 957
Hpy188III	TCNNGA	7 cut(s)	19, 121, 184, 321, 492, 500, 932
Hpy8I	GTNNAC	4 cut(s)	310, 641, 706, 832
Hpy99I	CGWCG	3 cut(s)	103, 242, 311
HpyAV	CCTTC	2 cut(s)	70, 626
HpyCH4III	ACNGT	3 cut(s)	307, 747, 988
HpyCH4IV	ACGT	3 cut(s)	240, 637, 651
HpyCH4V	TGCA	7 cut(s)	368, 429, 545, 575, 629, 666, 713
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 435
HpyF3I	CTNAG	1 cut(s)	249
HpySE526I	ACGT	3 cut(s)	240, 637, 651
Hsp92I	GRCGYC	1 cut(s)	240
Hsp92II	CATG	6 cut(s)	124, 283, 409, 569, 575, 753
HspAI	GCGC	1 cut(s)	419
KspAI	GTTAAC	2 cut(s)	706, 832
Kzo9I	GATC	3 cut(s)	117, 130, 906
LmnI	GCTCC	2 cut(s)	159, 962
Lsp1109I	GCAGC	2 cut(s)	17, 352
LweI	GCATC	2 cut(s)	174, 756
MaeI	CTAG	2 cut(s)	290, 467
MaeII	ACGT	3 cut(s)	240, 637, 651
MalI	GATC	3 cut(s)	119, 132, 908
MboI	GATC	3 cut(s)	117, 130, 906
MboII	GAAGA	1 cut(s)	739
MhlI	GDGCHC	1 cut(s)	156
MluCI	AATT	2 cut(s)	359, 583
MmeI	TCCRAC	3 cut(s)	81, 374, 970
MseI	TTAA	3 cut(s)	555, 705, 831
MslI	CAYNNNNRTG	2 cut(s)	570, 748
MspCI	CTTAAG	1 cut(s)	554
MspI	CCGG	1 cut(s)	50
MspR9I	CCNGG	2 cut(s)	718, 839
Mva1269I	GAATGC	1 cut(s)	421
MvaI	CCWGG	2 cut(s)	718, 839
MvnI	CGCG	2 cut(s)	20, 237
MwoI	GCNNNNNNNGC	2 cut(s)	11, 435
NdeII	GATC	3 cut(s)	117, 130, 906
NlaIII	CATG	6 cut(s)	124, 283, 409, 569, 575, 753
NlaIV	GGNNCC	1 cut(s)	36
NruI	TCGCGA	1 cut(s)	20
PagI	TCATGA	1 cut(s)	120
PcsI	WCGNNNNNNNCGW	1 cut(s)	234
PctI	GAATGC	1 cut(s)	421
PfeI	GAWTC	4 cut(s)	559, 803, 855, 893
PflFI	GACNNNGTC	1 cut(s)	745
PinAI	ACCGGT	1 cut(s)	49
PkrI	GCNGC	5 cut(s)	7, 62, 65, 236, 367
PshAI	GACNNNNGTC	1 cut(s)	760
Psp124BI	GAGCTC	1 cut(s)	156
Psp6I	CCWGG	2 cut(s)	716, 837
PspGI	CCWGG	2 cut(s)	716, 837
PspN4I	GGNNCC	1 cut(s)	36
PspPI	GGNCC	1 cut(s)	232
PstI	CTGCAG	1 cut(s)	631
PsyI	GACNNNGTC	1 cut(s)	745
RruI	TCGCGA	1 cut(s)	20
RsaI	GTAC	2 cut(s)	735, 821
RsaNI	GTAC	2 cut(s)	734, 820
RseI	CAYNNNNRTG	2 cut(s)	570, 748
SacI	GAGCTC	1 cut(s)	156
SalI	GTCGAC	1 cut(s)	308
SaqAI	TTAA	3 cut(s)	555, 705, 831
SatI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
Sau3AI	GATC	3 cut(s)	117, 130, 906
Sau96I	GGNCC	1 cut(s)	232
ScrFI	CCNGG	2 cut(s)	718, 839
SduI	GDGCHC	1 cut(s)	156
SfaNI	GCATC	2 cut(s)	174, 756
SfcI	CTRYAG	2 cut(s)	627, 871
SmiMI	CAYNNNNRTG	2 cut(s)	570, 748
SmlI	CTYRAG	2 cut(s)	143, 554
SmoI	CTYRAG	2 cut(s)	143, 554
Sse9I	AATT	2 cut(s)	359, 583
SsiI	CCGC	4 cut(s)	60, 63, 195, 235
SspMI	CTAG	2 cut(s)	290, 467
SstI	GAGCTC	1 cut(s)	156
StyD4I	CCNGG	2 cut(s)	716, 837
TaaI	ACNGT	3 cut(s)	307, 747, 988
TaiI	ACGT	3 cut(s)	243, 640, 654
TaqI	TCGA	8 cut(s)	129, 183, 228, 309, 615, 764, 858, 909
TasI	AATT	2 cut(s)	359, 583
TatI	WGTACW	1 cut(s)	819
TauI	GCSGC	3 cut(s)	63, 66, 237
TfiI	GAWTC	4 cut(s)	559, 803, 855, 893
Tru1I	TTAA	3 cut(s)	555, 705, 831
Tru9I	TTAA	3 cut(s)	555, 705, 831
TscAI	CASTG	4 cut(s)	271, 552, 750, 888
TseI	GCWGC	2 cut(s)	5, 365
TspDTI	ATGAA	5 cut(s)	56, 152, 560, 740, 959
TspGWI	ACGGA	1 cut(s)	489
TspRI	CASTG	4 cut(s)	271, 552, 750, 888
Tth111I	GACNNNGTC	1 cut(s)	745
Vha464I	CTTAAG	1 cut(s)	554
XmiI	GTMKAC	2 cut(s)	309, 640
XspI	CTAG	2 cut(s)	290, 467
ZraI	GACGTC	1 cut(s)	241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.