Rorug05G0416200

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000111
Physical Location & Seq
Forward (+)
57647619 .. 57654973
7355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0416200.1

Sequence Viewer

Length: 2214 bp
ATGGGTACTTCCCAAAATGATCAAACAATGGAGGGTTGGCTTTATCTCATTCGTTCTAATCGGATTGGGTTACAGTACTCCCGCAAACGATACTTTGTTCTTCAAGGCCATCTTCTTAAAAGCTTCAAATCACTCCCTGTTTCTGGCAATGAGGATCCCGTAAGAAGTGCTGTCATAGACGCATGCATCCGAGTGACTGATGATGGACGTGAGAGCATTAGTAGAAAAGTATTCTTCATATTCACACTCTATAATACGTCAAATCACAATGATCAACTTAAGTTGGGAGCAAGCAGTCCAGAAGAAGCCGCAAGATGGATTCATTCCTTTCAGGAAGTGGCTTTAAAGGCTGGTCCGGATCATGGGAGTAATGTTTTGGAATGTTCAAGTAGCATATGGAAGTCCTTTAGATTAGGTGGATCTAATAGGGGAAGTCGTATTAGTTCTATAGACTGGACCCTTTGTTCTTCTACACAAACTGATGCTGTGACATCCGATGTAATTGCTCCTTCACCTTGGACAATCTTTGGTTGTCAGAATGGTCTACGACTATTTAAAGAAGCGAAAGATAGGGATTCTCATGGGAAGTGGGATGATCATCCTGCCATCATGGCAGTGGGTGTGGTTGGTGGAACTTCAGAAGCCATTTTCCAGACACTTATGTCCCTTGGTCCCTCAAGATCTGAATGGGACTTCTGTTTCTACAAGGGCAATGTGGTTGAACACCTTGACGGTCACACTGATATCATTCACAAGCAGTTATATAGCGATTGGATGCCATGGGGAATGAAGCCGAGAGATCTATTGTTGCGGCGGTATTGGAGAAGGGAAGATGATGGGACATATGTTATTCTCTACCATTCTGTGTTCCATAAGAAGTATCCATCTCAGAAAGGCTACGTCCGCGCCTGCCTTAAAAGTGGAGGATATGTTATATCACCAGTGAACCAAGGGAAACATTCAGTTGTGAAGCACATGCTTGCAATTGATTGGAAGTACTGGAAATCTTATCTGCAGACTTCTTCATCCCGATCTATGACCATCAAAATGCTAGGAAGAGTTGCTGCACTACGAGAGTTATTCAAAACAAAAGTAGCAAACTATTCTTCCTCAGAGTTTTCATCTGGAGAGCTAAGGAGAAATTTTGGCGTGCATCAAAATGAAGGGTATGGAGAGGCTGATGCTCTGGCACTGACTGGGGATGGGAGCACTAATGAAAATATATTGGAAGAAGTGGATAAATCACCTTCAGAACATGCTAGTCTTGTTAGCTTGAATGATGCTTCTGATGAATTCTTTGATGTGCCTGAGCCTCCATACAATGATCAATCAGAAACTGACTGGACTCCTGATTTTGGCTCTGATATCTATTCACAGGAATTGCAGGATACACGTCATCCGAAGATATCAACTGCTGCTGGTTTTGTGAAGAGATTGCATGATCTTACAGTTCAGAAGAGGGGCTATGTGGACCTACAAGAGATGACCAGGGAAGACAGTATGTCATGCAACTATGGGTTCACACTTCCAAAAGATTCAACTTGTTCTTTGGCTTGCAGTTGGACTGAGACAGACCCTTCTACTTTTCTAATTCGTGGCAAAAGTTATCTGGAAGACCGTAAGAAGGTTAAAGCAAAGGGCACGTTGATGCAAATGGTTGCTGCAGATTGGCTAAGATCTGACAAGCGTGAAGATGATCTTGGAGGTCGTCCTGGGAGCATTGTTCAGAAATATGCAGCAAAGGGTGGGAAAGAATTCTTCTTCATTGTGAACATTCAGGTTCCAGGTTCAACCACATATAGCCTAGCGCTATACTATATGATGAGTTCTCCGGTTGAAGATGCACCCTTGCTAGAGAATTTTGTTAAGGGGGATGATGCATATAGAAATTCAAGGTTTAAGCTCATACCATACATATCTAAGGGTTCATGGATTGTTAAGCAGAGTGTGGGAAAGAAGGCATGCATCATTGGTCAAGCACTTGAAATAAATTACTTCCATGGGAAGAACTACGTGGAGCTTGGTATTGACATTGGATCATCGACAGTCGCAAGGGGTGTGGTTAGTCTTGTCCTCGGGTACCTAAACAATCTTGTGATTGAGATGGCATTTTTGATACAGGCAAATACGCCAGAGGAGCTTCCAGAGTATCTTCTTGGGACCTGCCGCCTTAATCATCTTGATGCCTCTAAGGCCATTTTAGTGAAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

737

Amino Acids

82.81

Weight (kDa)

7.03

Isoelectric Point (pI)

46.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH PF00169 9 - 113 3.8e-08 PH domain
START PF01852 200 - 343 1.3e-19 START domain
EDR2_C PF07059 521 - 728 7.4e-76 Protein ENHANCED DISEASE RESISTANCE 2, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 661
Acc36I ACCTGC 1 cut(s) 2171
Acc65I GGTACC 1 cut(s) 2079
AccB1I GGYRCC 1 cut(s) 2079
AccI GTMKAC 1 cut(s) 544
AccII CGCG 1 cut(s) 906
AccIII TCCGGA 1 cut(s) 355
AciI CCGC 6 cut(s) 82, 309, 811, 814, 904, 2167
AclWI GGATC 5 cut(s) 149, 162, 366, 427, 2044
AcsI RAATTY 5 cut(s) 1141, 1292, 1754, 1858, 1888
AcuI CTGAAG 2 cut(s) 621, 1233
AfaI GTAC 4 cut(s) 7, 77, 998, 2081
AfeI AGCGCT 1 cut(s) 1809
AfiI CCNNNNNNNGG 5 cut(s) 143, 315, 362, 1355, 1624
AflII CTTAAG 1 cut(s) 278
AflIII ACRYGT 1 cut(s) 1391
AhdI GACNNNNNGTC 1 cut(s) 1501
AjiI CACGTC 2 cut(s) 209, 1394
AjnI CCWGG 3 cut(s) 1487, 1711, 1783
AjuI GAANNNNNNNTTGG 2 cut(s) 1683, 1715
AloI GAACNNNNNNTCC 2 cut(s) 448, 480
AluBI AGCT 6 cut(s) 123, 1132, 1272, 1903, 2020, 2140
AluI AGCT 6 cut(s) 123, 1132, 1272, 1903, 2020, 2140
Alw21I GWGCWC 1 cut(s) 1211
Alw26I GTCTC 1 cut(s) 1562
AlwI GGATC 5 cut(s) 149, 162, 366, 427, 2044
AlwNI CAGNNNCTG 1 cut(s) 1337
Ama87I CYCGRG 1 cut(s) 2075
Aor13HI TCCGGA 1 cut(s) 355
Aor51HI AGCGCT 1 cut(s) 1809
AoxI GGCC 2 cut(s) 106, 2193
ApeKI GCWGC 4 cut(s) 1064, 1415, 1661, 1736
ApoI RAATTY 5 cut(s) 1141, 1292, 1754, 1858, 1888
Asp700I GAANNNNTTC 1 cut(s) 1754
Asp718I GGTACC 1 cut(s) 2079
AspLEI GCGC 2 cut(s) 908, 1810
AspS9I GGNCC 5 cut(s) 353, 456, 671, 1471, 2160
AsuHPI GGTGA 3 cut(s) 504, 930, 1236
AvaI CYCGRG 1 cut(s) 2075
AvaII GGWCC 5 cut(s) 353, 456, 671, 1471, 2160
BaeGI GKGCMC 1 cut(s) 1643
BamHI GGATCC 1 cut(s) 154
BanI GGYRCC 1 cut(s) 2079
BbsI GAAGAC 2 cut(s) 1500, 1620
Bbv12I GWGCWC 1 cut(s) 1211
BbvI GCAGC 4 cut(s) 1051, 1402, 1648, 1748
BccI CCATC 9 cut(s) 117, 197, 309, 614, 830, 892, 1049, 1196, 2098
BcgI CGANNNNNNTGC 2 cut(s) 485, 519
BciT130I CCWGG 3 cut(s) 1489, 1713, 1785
BciVI GTATCC 2 cut(s) 891, 1381
BclI TGATCA 4 cut(s) 19, 271, 595, 1324
BcoDI GTCTC 1 cut(s) 1562
BfaI CTAG 4 cut(s) 1052, 1260, 1805, 1853
BfmI CTRYAG 3 cut(s) 447, 1013, 1662
BfoI RGCGCY 1 cut(s) 1811
BfrI CTTAAG 1 cut(s) 278
BfuAI ACCTGC 1 cut(s) 2171
BfuI GTATCC 2 cut(s) 891, 1381
BglI GCCNNNNNGGC 2 cut(s) 611, 2192
BglII AGATCT 3 cut(s) 680, 799, 1676
BisI GCNGC 7 cut(s) 309, 812, 1065, 1416, 1662, 1737, 2167
BlsI GCNGC 7 cut(s) 310, 813, 1066, 1417, 1663, 1738, 2168
BmcAI AGTACT 2 cut(s) 77, 998
Bme1390I CCNGG 3 cut(s) 1489, 1713, 1785
Bme18I GGWCC 5 cut(s) 353, 456, 671, 1471, 2160
BmeRI GACNNNNNGTC 1 cut(s) 1501
BmeT110I CYCGRG 1 cut(s) 2075
BmgBI CACGTC 2 cut(s) 209, 1394
BmgT120I GGNCC 5 cut(s) 353, 456, 671, 1471, 2160
BmiI GGNNCC 6 cut(s) 156, 458, 673, 1782, 2081, 2161
BmrFI CCNGG 3 cut(s) 1489, 1713, 1785
BmrI ACTGGG 1 cut(s) 1206
BmuI ACTGGG 1 cut(s) 1206
BpiI GAAGAC 2 cut(s) 1500, 1620
BpmI CTGGAG 1 cut(s) 1146
Bpu10I CCTNAGC 2 cut(s) 1133, 1308
BpuEI CTTGAG 1 cut(s) 661
BsaAI YACGTR 1 cut(s) 2014
BsaBI GATNNNNATC 1 cut(s) 597
BsaJI CCNNGG 8 cut(s) 515, 667, 779, 949, 1488, 1712, 1999, 2074
BsaWI WCCGGW 2 cut(s) 355, 1831
BsaXI ACNNNNNCTCC 2 cut(s) 915, 945
Bsc4I CCNNNNNNNGG 5 cut(s) 143, 315, 362, 1355, 1624
Bse1I ACTGG 5 cut(s) 458, 941, 1004, 1201, 1346
Bse3DI GCAATG 2 cut(s) 154, 718
Bse8I GATNNNNATC 1 cut(s) 597
BseAI TCCGGA 1 cut(s) 355
BseBI CCWGG 3 cut(s) 1489, 1713, 1785
BseDI CCNNGG 8 cut(s) 515, 667, 779, 949, 1488, 1712, 1999, 2074
BseGI GGATG 9 cut(s) 186, 491, 598, 598, 780, 1025, 1207, 1396, 1879
BseJI GATNNNNATC 1 cut(s) 597
BseLI CCNNNNNNNGG 5 cut(s) 143, 315, 362, 1355, 1624
BseMI GCAATG 2 cut(s) 154, 718
BseMII CTCAG 4 cut(s) 902, 1125, 1299, 1557
BseNI ACTGG 5 cut(s) 458, 941, 1004, 1201, 1346
BseRI GAGGAG 1 cut(s) 2150
BseSI GKGCMC 1 cut(s) 1643
BseXI GCAGC 4 cut(s) 1051, 1402, 1648, 1748
BsgI GTGCAG 1 cut(s) 1050
Bsh1236I CGCG 1 cut(s) 906
BshFI GGCC 2 cut(s) 108, 2195
BshNI GGYRCC 1 cut(s) 2079
BsiHKAI GWGCWC 1 cut(s) 1211
BsiHKCI CYCGRG 1 cut(s) 2075
BsiSI CCGG 2 cut(s) 356, 1832
BslFI GGGAC 5 cut(s) 649, 657, 704, 853, 2173
BslI CCNNNNNNNGG 5 cut(s) 143, 315, 362, 1355, 1624
BsmAI GTCTC 1 cut(s) 1562
BsmFI GGGAC 5 cut(s) 649, 657, 704, 853, 2173
BsnI GGCC 2 cut(s) 108, 2195
BsoBI CYCGRG 1 cut(s) 2075
Bsp1286I GDGCHC 2 cut(s) 1211, 1643
Bsp13I TCCGGA 1 cut(s) 355
Bsp19I CCATGG 2 cut(s) 779, 1999
BspACI CCGC 6 cut(s) 82, 309, 811, 814, 904, 2167
BspANI GGCC 2 cut(s) 108, 2195
BspCNI CTCAG 4 cut(s) 901, 1124, 1300, 1558
BspEI TCCGGA 1 cut(s) 355
BspFNI CGCG 1 cut(s) 906
BspLI GGNNCC 6 cut(s) 156, 458, 673, 1782, 2081, 2161
BspMAI CTGCAG 2 cut(s) 1017, 1666
BspMI ACCTGC 1 cut(s) 2171
BspPI GGATC 5 cut(s) 149, 162, 366, 427, 2044
BspT107I GGYRCC 1 cut(s) 2079
BspTI CTTAAG 1 cut(s) 278
BsrDI GCAATG 2 cut(s) 154, 718
BsrI ACTGG 5 cut(s) 458, 941, 1004, 1201, 1346
BssECI CCNNGG 8 cut(s) 515, 667, 779, 949, 1488, 1712, 1999, 2074
BssT1I CCWWGG 5 cut(s) 515, 667, 779, 949, 1999
Bst2UI CCWGG 3 cut(s) 1489, 1713, 1785
Bst4CI ACNGT 6 cut(s) 75, 734, 1450, 1499, 1619, 2047
Bst6I CTCTTC 3 cut(s) 1051, 1424, 1451
BstAFI CTTAAG 1 cut(s) 278
BstBAI YACGTR 1 cut(s) 2014
BstC8I GCNNGC 7 cut(s) 184, 292, 910, 981, 1151, 1555, 1963
BstDEI CTNAG 8 cut(s) 888, 1111, 1133, 1308, 1566, 1673, 1920, 2190
BstDSI CCRYGG 2 cut(s) 779, 1999
BstF5I GGATG 9 cut(s) 186, 491, 598, 598, 780, 1025, 1207, 1396, 1879
BstFNI CGCG 1 cut(s) 906
BstH2I RGCGCY 1 cut(s) 1811
BstHHI GCGC 2 cut(s) 908, 1810
BstMAI GTCTC 1 cut(s) 1562
BstMWI GCNNNNNNNGC 5 cut(s) 347, 611, 903, 2137, 2192
BstNI CCWGG 3 cut(s) 1489, 1713, 1785
BstNSI RCATGY 4 cut(s) 186, 979, 1259, 1965
BstSCI CCNGG 3 cut(s) 1487, 1711, 1783
BstSFI CTRYAG 3 cut(s) 447, 1013, 1662
BstSLI GKGCMC 1 cut(s) 1643
BstUI CGCG 1 cut(s) 906
BstV1I GCAGC 4 cut(s) 1051, 1402, 1648, 1748
BstV2I GAAGAC 2 cut(s) 1500, 1620
BstX2I RGATCY 5 cut(s) 154, 419, 680, 799, 1676
BstYI RGATCY 5 cut(s) 154, 419, 680, 799, 1676
BsuI GTATCC 2 cut(s) 891, 1381
BsuRI GGCC 2 cut(s) 108, 2195
BtgI CCRYGG 2 cut(s) 779, 1999
BtrI CACGTC 2 cut(s) 209, 1394
BtsCI GGATG 9 cut(s) 186, 491, 598, 598, 780, 1025, 1207, 1396, 1879
BtsI GCAGTG 1 cut(s) 621
BtsIMutI CAGTG 4 cut(s) 621, 738, 948, 1190
BveI ACCTGC 1 cut(s) 2171
Cac8I GCNNGC 7 cut(s) 184, 292, 910, 981, 1151, 1555, 1963
CaiI CAGNNNCTG 1 cut(s) 1337
CfoI GCGC 2 cut(s) 908, 1810
Cfr13I GGNCC 5 cut(s) 353, 456, 671, 1471, 2160
CseI GACGC 1 cut(s) 188
Csp6I GTAC 4 cut(s) 6, 76, 997, 2080
CspCI CAANNNNNGTGG 2 cut(s) 2040, 2075
CviQI GTAC 4 cut(s) 6, 76, 997, 2080
DdeI CTNAG 8 cut(s) 888, 1111, 1133, 1308, 1566, 1673, 1920, 2190
DraI TTTAAA 2 cut(s) 345, 556
DrdI GACNNNNNNGTC 1 cut(s) 661
DriI GACNNNNNGTC 1 cut(s) 1501
DseDI GACNNNNNNGTC 1 cut(s) 661
Eam1104I CTCTTC 3 cut(s) 1051, 1424, 1451
Eam1105I GACNNNNNGTC 1 cut(s) 1501
EarI CTCTTC 3 cut(s) 1051, 1424, 1451
Eco130I CCWWGG 5 cut(s) 515, 667, 779, 949, 1999
Eco32I GATATC 3 cut(s) 745, 1366, 1407
Eco47I GGWCC 5 cut(s) 353, 456, 671, 1471, 2160
Eco47III AGCGCT 1 cut(s) 1809
Eco57I CTGAAG 2 cut(s) 621, 1233
Eco88I CYCGRG 1 cut(s) 2075
EcoO109I RGGNCCY 1 cut(s) 2160
EcoRI GAATTC 2 cut(s) 1292, 1754
EcoRII CCWGG 3 cut(s) 1487, 1711, 1783
EcoRV GATATC 3 cut(s) 745, 1366, 1407
EcoT14I CCWWGG 5 cut(s) 515, 667, 779, 949, 1999
EcoT22I ATGCAT 3 cut(s) 188, 1882, 1967
ErhI CCWWGG 5 cut(s) 515, 667, 779, 949, 1999
FalI AAGNNNNNCTT 4 cut(s) 96, 128, 1683, 1715
FaqI GGGAC 5 cut(s) 649, 657, 704, 853, 2173
FauI CCCGC 1 cut(s) 89
FauNDI CATATG 2 cut(s) 395, 844
FbaI TGATCA 4 cut(s) 19, 271, 595, 1324
FblI GTMKAC 1 cut(s) 544
Fnu4HI GCNGC 7 cut(s) 309, 812, 1065, 1416, 1662, 1737, 2167
FokI GGATG 9 cut(s) 173, 478, 585, 605, 787, 1012, 1214, 1383, 1886
Fsp4HI GCNGC 7 cut(s) 309, 812, 1065, 1416, 1662, 1737, 2167
FspBI CTAG 4 cut(s) 1052, 1260, 1805, 1853
GlaI GCGC 2 cut(s) 907, 1809
GluI GCNGC 7 cut(s) 309, 812, 1065, 1416, 1662, 1737, 2167
GsuI CTGGAG 1 cut(s) 1146
HaeII RGCGCY 1 cut(s) 1811
HaeIII GGCC 2 cut(s) 108, 2195
HapII CCGG 2 cut(s) 356, 1832
HgaI GACGC 1 cut(s) 188
HhaI GCGC 2 cut(s) 908, 1810
Hin6I GCGC 2 cut(s) 906, 1808
HinP1I GCGC 2 cut(s) 906, 1808
HindIII AAGCTT 1 cut(s) 121
HinfI GANTC 4 cut(s) 319, 575, 1345, 1535
HpaII CCGG 2 cut(s) 356, 1832
HphI GGTGA 3 cut(s) 504, 930, 1236
Hpy166II GTNNAC 5 cut(s) 545, 946, 1471, 1521, 1771
Hpy8I GTNNAC 5 cut(s) 545, 946, 1471, 1521, 1771
HpyAV CCTTC 7 cut(s) 519, 819, 1157, 1257, 1587, 1618, 1951
HpyCH4III ACNGT 6 cut(s) 75, 734, 1450, 1499, 1619, 2047
HpyCH4IV ACGT 6 cut(s) 208, 257, 900, 1393, 1643, 2013
HpyF10VI GCNNNNNNNGC 5 cut(s) 347, 611, 903, 2137, 2192
HpyF3I CTNAG 8 cut(s) 888, 1111, 1133, 1308, 1566, 1673, 1920, 2190
HpySE526I ACGT 6 cut(s) 208, 257, 900, 1393, 1643, 2013
HspAI GCGC 2 cut(s) 906, 1808
Kpn2I TCCGGA 1 cut(s) 355
KpnI GGTACC 1 cut(s) 2083
Ksp22I TGATCA 4 cut(s) 19, 271, 595, 1324
LmnI GCTCC 6 cut(s) 287, 511, 1206, 1716, 2017, 2137
Lsp1109I GCAGC 4 cut(s) 1051, 1402, 1648, 1748
MaeI CTAG 4 cut(s) 1052, 1260, 1805, 1853
MaeII ACGT 6 cut(s) 208, 257, 900, 1393, 1643, 2013
MaeIII GTNAC 4 cut(s) 69, 193, 487, 734
MfeI CAATTG 1 cut(s) 984
MflI RGATCY 5 cut(s) 154, 419, 680, 799, 1676
MhlI GDGCHC 2 cut(s) 1211, 1643
MlyI GAGTC 1 cut(s) 1339
MmeI TCCRAC 1 cut(s) 1541
Mph1103I ATGCAT 3 cut(s) 188, 1882, 1967
MroI TCCGGA 1 cut(s) 355
MroXI GAANNNNTTC 1 cut(s) 1754
MslI CAYNNNNRTG 7 cut(s) 191, 614, 1046, 1158, 1646, 2181, 2201
MspCI CTTAAG 1 cut(s) 278
MspI CCGG 2 cut(s) 356, 1832
MspR9I CCNGG 3 cut(s) 1489, 1713, 1785
MunI CAATTG 1 cut(s) 984
MvaI CCWGG 3 cut(s) 1489, 1713, 1785
MvnI CGCG 1 cut(s) 906
MwoI GCNNNNNNNGC 5 cut(s) 347, 611, 903, 2137, 2192
NcoI CCATGG 2 cut(s) 779, 1999
NdeI CATATG 2 cut(s) 395, 844
NlaIV GGNNCC 6 cut(s) 156, 458, 673, 1782, 2081, 2161
NmeAIII GCCGAG 1 cut(s) 819
NmuCI GTSAC 3 cut(s) 193, 487, 734
NsiI ATGCAT 3 cut(s) 188, 1882, 1967
NspI RCATGY 4 cut(s) 186, 979, 1259, 1965
PaeI GCATGC 2 cut(s) 186, 1965
PdmI GAANNNNTTC 1 cut(s) 1754
PfeI GAWTC 3 cut(s) 319, 575, 1535
PkrI GCNGC 7 cut(s) 310, 813, 1066, 1417, 1663, 1738, 2168
PleI GAGTC 1 cut(s) 1339
PpsI GAGTC 1 cut(s) 1339
Ppu21I YACGTR 1 cut(s) 2014
PpuMI RGGWCCY 1 cut(s) 2160
Psp5II RGGWCCY 1 cut(s) 2160
Psp6I CCWGG 3 cut(s) 1487, 1711, 1783
PspGI CCWGG 3 cut(s) 1487, 1711, 1783
PspN4I GGNNCC 6 cut(s) 156, 458, 673, 1782, 2081, 2161
PspPI GGNCC 5 cut(s) 353, 456, 671, 1471, 2160
PspPPI RGGWCCY 1 cut(s) 2160
PstI CTGCAG 2 cut(s) 1017, 1666
PstNI CAGNNNCTG 1 cut(s) 1337
PsuI RGATCY 5 cut(s) 154, 419, 680, 799, 1676
RsaI GTAC 4 cut(s) 7, 77, 998, 2081
RsaNI GTAC 4 cut(s) 6, 76, 997, 2080
RseI CAYNNNNRTG 7 cut(s) 191, 614, 1046, 1158, 1646, 2181, 2201
SatI GCNGC 7 cut(s) 309, 812, 1065, 1416, 1662, 1737, 2167
Sau96I GGNCC 5 cut(s) 353, 456, 671, 1471, 2160
ScaI AGTACT 2 cut(s) 77, 998
SchI GAGTC 1 cut(s) 1339
ScrFI CCNGG 3 cut(s) 1489, 1713, 1785
SduI GDGCHC 2 cut(s) 1211, 1643
SfcI CTRYAG 3 cut(s) 447, 1013, 1662
SinI GGWCC 5 cut(s) 353, 456, 671, 1471, 2160
SmiMI CAYNNNNRTG 7 cut(s) 191, 614, 1046, 1158, 1646, 2181, 2201
SmlI CTYRAG 2 cut(s) 278, 676
SmoI CTYRAG 2 cut(s) 278, 676
SphI GCATGC 2 cut(s) 186, 1965
SsiI CCGC 6 cut(s) 82, 309, 811, 814, 904, 2167
SspMI CTAG 4 cut(s) 1052, 1260, 1805, 1853
StyD4I CCNGG 3 cut(s) 1487, 1711, 1783
StyI CCWWGG 5 cut(s) 515, 667, 779, 949, 1999
TaaI ACNGT 6 cut(s) 75, 734, 1450, 1499, 1619, 2047
TaiI ACGT 6 cut(s) 211, 260, 903, 1396, 1646, 2016
TaqI TCGA 1 cut(s) 2042
TatI WGTACW 2 cut(s) 75, 996
TauI GCSGC 3 cut(s) 311, 814, 2169
TfiI GAWTC 3 cut(s) 319, 575, 1535
TscAI CASTG 4 cut(s) 621, 745, 948, 1197
TseFI GTSAC 3 cut(s) 193, 487, 734
TseI GCWGC 4 cut(s) 1064, 1415, 1661, 1736
Tsp45I GTSAC 3 cut(s) 193, 487, 734
TspRI CASTG 4 cut(s) 621, 745, 948, 1197
Vha464I CTTAAG 1 cut(s) 278
VpaK11BI GGWCC 5 cut(s) 353, 456, 671, 1471, 2160
XapI RAATTY 5 cut(s) 1141, 1292, 1754, 1858, 1888
XceI RCATGY 4 cut(s) 186, 979, 1259, 1965
XcmI CCANNNNNNNNNTGG 1 cut(s) 613
XmiI GTMKAC 1 cut(s) 544
XmnI GAANNNNTTC 1 cut(s) 1754
XspI CTAG 4 cut(s) 1052, 1260, 1805, 1853
ZrmI AGTACT 2 cut(s) 77, 998
Zsp2I ATGCAT 3 cut(s) 188, 1882, 1967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.