Rh7DG413100

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000111
Physical Location & Seq
Reverse (-)
58076193 .. 58079215
3023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG413100.1

Sequence Viewer

Length: 1254 bp
ATGGCGGACCAACACAAGGCGGTCTGCCGTAGCTTGCCGTCGGAGATCATACGCGAGATTCTTTCGCGGTTGCCGGTCAAGTCTTTATGCCGCTTCAGGTGTGTATCAAAGTCTTGGCTTTCGCTAATCACAGACCCCCAATTTGTGAAGATGCATTTCAACAAAGCCATTCAGAATGAGGATCTGTTTTACCAAAGAAGAAAACTGTTATTCACTGATGAAAAAGGTGATTCACTTTACTCTTTCGACCTCGATGAGTTTCTTCATCATTATCATGATCATCCATTTCTGAATGGTCTTGGTAACTGTAACAATGTTAATGTTGGTGTCATTGGTAATGATTATGATGGTGATCTAGTTGTCACTAGACTCAAACTGCCCAGTGGTGTTGGGGTCCCTAAATATTTCAGTGAATGTTGGACCTTGGTGTCTTTCTGCTGTGGCCTAGTGTTATTTAGGTTGGATTCGGACTTATATGTGGCTAACCCAGCATTGAGGAAATATAAGAAACTGCCAGCTCCATCTGCAAAGTTGGATCTTGGATCCTTAATCCATTACCAATTTGGGTTCGGTTTTGATCACACCACTGATGATTTTAAGGTGATTAAATCGATGTCCTGGTATGATGGAGTGGATTTTATTGTCTTTGCATTCAAAACTGGTTCTTGGCGACAAATTCAAAGGCGATTGCCCTACATAAATTTTCGTCCTCGTACTGGGATAATGCTTAATGGAAGACTTCATTGTATGATGTGGAGCCTGAAAGGTAACTCATGGGTGATTGTATCTCTCTCTTTAGCAGAAGAGGAGGTTCAGGAAATTCCACTGCCGCTTGATTTAGATGTGGGAATCTTGGATGACATGGAATTGGGACTGTTCTTCAAAGACAGCCTCTGTATAATTTATCCAGTTAGCACTGAAAGCGTAGGTAAAGATAGAGCAACAAGTAAAAATGATTTTTGGGTTATGAAGGAATATGGGGAGGCGGAGTCTTGGACTAAAAAAGAATTCTTCTCTGACTATGAACCTTCTTTATTGCCTTCCGGTTACTGGAAGGAAAATCATGTTCTCTTCCGGTCCGGTACCAGTGATGCGTTGGGAATGTACAATTTCAATGATTTTAGCTGTCAAGGTCTATTGATTCCTGGATATCCCACTGTTATTGGGGCTGGTTTCTACGTGGAGAGCCTTGTTTCCTTGGATGATCATCGCGATTTTAATGAGCATATCCAGCATGAGAGGAATCTTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

417

Amino Acids

47.96

Weight (kDa)

5.82

Isoelectric Point (pI)

37.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 48 1e-12 F-box domain
F-box-like PF12937 11 - 48 1.1e-09 F-box-like
FBA_3 PF08268 139 - 340 9.7e-17 F-box associated beta propeller domain
FBA_1 PF07734 144 - 334 3.1e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 427
Acc65I GGTACC 1 cut(s) 1082
AccB1I GGYRCC 1 cut(s) 1082
AccII CGCG 3 cut(s) 54, 67, 1212
AciI CCGC 6 cut(s) 5, 20, 67, 91, 830, 986
AclWI GGATC 4 cut(s) 189, 537, 543, 550
AcsI RAATTY 4 cut(s) 675, 700, 819, 1007
AcuI CTGAAG 1 cut(s) 79
AfaI GTAC 3 cut(s) 715, 1084, 1106
AfiI CCNNNNNNNGG 3 cut(s) 16, 716, 1050
AgsI TTSAA 5 cut(s) 160, 655, 680, 883, 1114
AjnI CCWGG 2 cut(s) 617, 1144
AluBI AGCT 4 cut(s) 33, 518, 1125, 1251
AluI AGCT 4 cut(s) 33, 518, 1125, 1251
AlwI GGATC 4 cut(s) 189, 537, 543, 550
AlwNI CAGNNNCTG 1 cut(s) 894
AoxI GGCC 1 cut(s) 442
ApoI RAATTY 4 cut(s) 675, 700, 819, 1007
ArsI GACNNNNNNTTYG 2 cut(s) 125, 157
Asp718I GGTACC 1 cut(s) 1082
AspS9I GGNCC 4 cut(s) 7, 394, 420, 1077
AsuHPI GGTGA 4 cut(s) 239, 362, 613, 790
AvaII GGWCC 4 cut(s) 7, 394, 420, 1077
BamHI GGATCC 1 cut(s) 542
BanI GGYRCC 1 cut(s) 1082
BbsI GAAGAC 1 cut(s) 742
BccI CCATC 3 cut(s) 341, 529, 620
BceAI ACGGC 2 cut(s) 12, 22
BciT130I CCWGG 2 cut(s) 619, 1146
BclI TGATCA 3 cut(s) 277, 577, 1204
BfaI CTAG 3 cut(s) 356, 366, 446
BisI GCNGC 2 cut(s) 91, 830
BlsI GCNGC 2 cut(s) 92, 831
Bme1390I CCNGG 2 cut(s) 619, 1146
Bme18I GGWCC 4 cut(s) 7, 394, 420, 1077
BmgT120I GGNCC 4 cut(s) 7, 394, 420, 1077
BmiI GGNNCC 5 cut(s) 395, 396, 544, 758, 1084
BmrFI CCNGG 2 cut(s) 619, 1146
BmrI ACTGGG 2 cut(s) 375, 726
BmsI GCATC 2 cut(s) 141, 1081
BmuI ACTGGG 2 cut(s) 375, 726
BpiI GAAGAC 1 cut(s) 742
Bsa29I ATCGAT 1 cut(s) 611
BsaAI YACGTR 1 cut(s) 1180
BsaBI GATNNNNATC 2 cut(s) 351, 1206
BsaJI CCNNGG 2 cut(s) 423, 1197
BsaWI WCCGGW 3 cut(s) 1043, 1074, 1079
BsaXI ACNNNNNCTCC 2 cut(s) 974, 1004
Bsc4I CCNNNNNNNGG 3 cut(s) 16, 716, 1050
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 6 cut(s) 381, 664, 721, 908, 1055, 1086
Bse8I GATNNNNATC 2 cut(s) 351, 1206
BseBI CCWGG 2 cut(s) 619, 1146
BseCI ATCGAT 1 cut(s) 611
BseDI CCNNGG 2 cut(s) 423, 1197
BseGI GGATG 3 cut(s) 280, 862, 1207
BseJI GATNNNNATC 2 cut(s) 351, 1206
BseLI CCNNNNNNNGG 3 cut(s) 16, 716, 1050
BseNI ACTGG 6 cut(s) 381, 664, 721, 908, 1055, 1086
BseRI GAGGAG 1 cut(s) 821
BseYI CCCAGC 1 cut(s) 487
Bsh1236I CGCG 3 cut(s) 54, 67, 1212
BshFI GGCC 1 cut(s) 444
BshNI GGYRCC 1 cut(s) 1082
BshVI ATCGAT 1 cut(s) 611
BsiSI CCGG 4 cut(s) 74, 1044, 1075, 1080
BslFI GGGAC 2 cut(s) 380, 885
BslI CCNNNNNNNGG 3 cut(s) 16, 716, 1050
BsmFI GGGAC 2 cut(s) 380, 885
BsmI GAATGC 1 cut(s) 650
BsnI GGCC 1 cut(s) 444
Bsp1407I TGTACA 1 cut(s) 1104
Bsp143I GATC 8 cut(s) 45, 181, 277, 352, 535, 542, 577, 1204
Bsp68I TCGCGA 1 cut(s) 1212
BspACI CCGC 6 cut(s) 5, 20, 67, 91, 830, 986
BspANI GGCC 1 cut(s) 444
BspDI ATCGAT 1 cut(s) 611
BspFNI CGCG 3 cut(s) 54, 67, 1212
BspHI TCATGA 1 cut(s) 274
BspLI GGNNCC 5 cut(s) 395, 396, 544, 758, 1084
BspPI GGATC 4 cut(s) 189, 537, 543, 550
BspT107I GGYRCC 1 cut(s) 1082
BsrFI RCCGGY 1 cut(s) 73
BsrGI TGTACA 1 cut(s) 1104
BsrI ACTGG 6 cut(s) 381, 664, 721, 908, 1055, 1086
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 2 cut(s) 423, 1197
BssMI GATC 8 cut(s) 45, 181, 277, 352, 535, 542, 577, 1204
BssT1I CCWWGG 2 cut(s) 423, 1197
Bst2UI CCWGG 2 cut(s) 619, 1146
Bst4CI ACNGT 4 cut(s) 207, 308, 876, 1159
Bst6I CTCTTC 2 cut(s) 798, 1076
BstAUI TGTACA 1 cut(s) 1104
BstBAI YACGTR 1 cut(s) 1180
BstC8I GCNNGC 2 cut(s) 35, 516
BstDEI CTNAG 1 cut(s) 1247
BstF5I GGATG 3 cut(s) 280, 862, 1207
BstFNI CGCG 3 cut(s) 54, 67, 1212
BstKTI GATC 8 cut(s) 48, 184, 280, 355, 538, 545, 580, 1207
BstMBI GATC 8 cut(s) 45, 181, 277, 352, 535, 542, 577, 1204
BstMWI GCNNNNNNNGC 4 cut(s) 488, 524, 921, 1231
BstNI CCWGG 2 cut(s) 619, 1146
BstSCI CCNGG 2 cut(s) 617, 1144
BstUI CGCG 3 cut(s) 54, 67, 1212
BstV2I GAAGAC 1 cut(s) 742
BstX2I RGATCY 3 cut(s) 181, 535, 542
BstYI RGATCY 3 cut(s) 181, 535, 542
Bsu15I ATCGAT 1 cut(s) 611
BsuRI GGCC 1 cut(s) 444
BsuTUI ATCGAT 1 cut(s) 611
BtgZI GCGATG 1 cut(s) 1193
BtsCI GGATG 3 cut(s) 280, 862, 1207
BtsI GCAGTG 1 cut(s) 824
BtsIMutI CAGTG 8 cut(s) 213, 388, 415, 585, 824, 915, 1093, 1155
BtuMI TCGCGA 1 cut(s) 1212
Cac8I GCNNGC 2 cut(s) 35, 516
CaiI CAGNNNCTG 1 cut(s) 894
CciI TCATGA 1 cut(s) 274
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 4 cut(s) 7, 394, 420, 1077
ClaI ATCGAT 1 cut(s) 611
CpoI CGGWCCG 1 cut(s) 1077
Csp6I GTAC 3 cut(s) 714, 1083, 1105
CspCI CAANNNNNGTGG 2 cut(s) 1144, 1179
CspI CGGWCCG 1 cut(s) 1077
CviAII CATG 5 cut(s) 275, 774, 862, 1064, 1235
CviQI GTAC 3 cut(s) 714, 1083, 1105
DdeI CTNAG 1 cut(s) 1247
DpnI GATC 8 cut(s) 47, 183, 279, 354, 537, 544, 579, 1206
DpnII GATC 8 cut(s) 45, 181, 277, 352, 535, 542, 577, 1204
DrdI GACNNNNNNGTC 1 cut(s) 427
DseDI GACNNNNNNGTC 1 cut(s) 427
Eam1104I CTCTTC 2 cut(s) 798, 1076
EarI CTCTTC 2 cut(s) 798, 1076
EciI GGCGGA 2 cut(s) 20, 1001
Eco130I CCWWGG 2 cut(s) 423, 1197
Eco32I GATATC 1 cut(s) 1151
Eco47I GGWCC 4 cut(s) 7, 394, 420, 1077
Eco57I CTGAAG 1 cut(s) 79
EcoO109I RGGNCCY 1 cut(s) 394
EcoRI GAATTC 1 cut(s) 1007
EcoRII CCWGG 2 cut(s) 617, 1144
EcoRV GATATC 1 cut(s) 1151
EcoT14I CCWWGG 2 cut(s) 423, 1197
EcoT22I ATGCAT 1 cut(s) 156
ErhI CCWWGG 2 cut(s) 423, 1197
FaeI CATG 5 cut(s) 278, 777, 865, 1067, 1238
FaqI GGGAC 2 cut(s) 380, 885
FatI CATG 5 cut(s) 274, 773, 861, 1063, 1234
FbaI TGATCA 3 cut(s) 277, 577, 1204
Fnu4HI GCNGC 2 cut(s) 91, 830
FokI GGATG 3 cut(s) 267, 869, 1214
Fsp4HI GCNGC 2 cut(s) 91, 830
FspBI CTAG 3 cut(s) 356, 366, 446
GluI GCNGC 2 cut(s) 91, 830
GsaI CCCAGC 1 cut(s) 491
HaeIII GGCC 1 cut(s) 444
HapII CCGG 4 cut(s) 74, 1044, 1075, 1080
Hin1II CATG 5 cut(s) 278, 777, 865, 1067, 1238
HinfI GANTC 8 cut(s) 58, 230, 369, 464, 849, 989, 1141, 1243
HpaII CCGG 4 cut(s) 74, 1044, 1075, 1080
HphI GGTGA 4 cut(s) 239, 362, 613, 790
Hpy188I TCNGA 5 cut(s) 43, 174, 291, 469, 1018
Hpy188III TCNNGA 3 cut(s) 275, 815, 1211
Hpy99I CGWCG 1 cut(s) 43
HpyAV CCTTC 4 cut(s) 964, 1038, 1048, 1050
HpyCH4III ACNGT 4 cut(s) 207, 308, 876, 1159
HpyCH4IV ACGT 1 cut(s) 1179
HpyCH4V TGCA 3 cut(s) 154, 527, 650
HpyF10VI GCNNNNNNNGC 4 cut(s) 488, 524, 921, 1231
HpyF3I CTNAG 1 cut(s) 1247
HpySE526I ACGT 1 cut(s) 1179
Hsp92II CATG 5 cut(s) 278, 777, 865, 1067, 1238
KflI GGGWCCC 1 cut(s) 394
KpnI GGTACC 1 cut(s) 1086
Ksp22I TGATCA 3 cut(s) 277, 577, 1204
Kzo9I GATC 8 cut(s) 45, 181, 277, 352, 535, 542, 577, 1204
LmnI GCTCC 2 cut(s) 523, 756
LweI GCATC 2 cut(s) 141, 1081
MaeI CTAG 3 cut(s) 356, 366, 446
MaeII ACGT 1 cut(s) 1179
MaeIII GTNAC 5 cut(s) 302, 308, 361, 767, 1046
MalI GATC 8 cut(s) 47, 183, 279, 354, 537, 544, 579, 1206
MboI GATC 8 cut(s) 45, 181, 277, 352, 535, 542, 577, 1204
MboII GAAGA 8 cut(s) 160, 210, 254, 747, 815, 871, 1003, 1063
MflI RGATCY 3 cut(s) 181, 535, 542
MluCI AATT 9 cut(s) 140, 560, 675, 700, 819, 866, 900, 1007, 1108
MlyI GAGTC 2 cut(s) 363, 998
MmeI TCCRAC 4 cut(s) 21, 398, 441, 513
MnlI CCTC 9 cut(s) 172, 260, 489, 720, 799, 802, 902, 976, 1233
Mph1103I ATGCAT 1 cut(s) 156
MseI TTAA 6 cut(s) 318, 548, 597, 606, 729, 1218
MslI CAYNNNNRTG 1 cut(s) 273
MspI CCGG 4 cut(s) 74, 1044, 1075, 1080
MspR9I CCNGG 2 cut(s) 619, 1146
Mva1269I GAATGC 1 cut(s) 650
MvaI CCWGG 2 cut(s) 619, 1146
MvnI CGCG 3 cut(s) 54, 67, 1212
MwoI GCNNNNNNNGC 4 cut(s) 488, 524, 921, 1231
NdeII GATC 8 cut(s) 45, 181, 277, 352, 535, 542, 577, 1204
NlaIII CATG 5 cut(s) 278, 777, 865, 1067, 1238
NlaIV GGNNCC 5 cut(s) 395, 396, 544, 758, 1084
NmuCI GTSAC 1 cut(s) 361
NruI TCGCGA 1 cut(s) 1212
NsiI ATGCAT 1 cut(s) 156
PagI TCATGA 1 cut(s) 274
PctI GAATGC 1 cut(s) 650
PfeI GAWTC 6 cut(s) 58, 230, 464, 849, 1141, 1243
PfoI TCCNGGA 1 cut(s) 1144
PkrI GCNGC 2 cut(s) 92, 831
PleI GAGTC 2 cut(s) 363, 997
PpsI GAGTC 2 cut(s) 363, 997
Ppu21I YACGTR 1 cut(s) 1180
PpuMI RGGWCCY 1 cut(s) 394
Psp5II RGGWCCY 1 cut(s) 394
Psp6I CCWGG 2 cut(s) 617, 1144
PspFI CCCAGC 1 cut(s) 487
PspGI CCWGG 2 cut(s) 617, 1144
PspN4I GGNNCC 5 cut(s) 395, 396, 544, 758, 1084
PspPI GGNCC 4 cut(s) 7, 394, 420, 1077
PspPPI RGGWCCY 1 cut(s) 394
PstNI CAGNNNCTG 1 cut(s) 894
PsuI RGATCY 3 cut(s) 181, 535, 542
RruI TCGCGA 1 cut(s) 1212
RsaI GTAC 3 cut(s) 715, 1084, 1106
RsaNI GTAC 3 cut(s) 714, 1083, 1105
RseI CAYNNNNRTG 1 cut(s) 273
Rsr2I CGGWCCG 1 cut(s) 1077
RsrII CGGWCCG 1 cut(s) 1077
SaqAI TTAA 6 cut(s) 318, 548, 597, 606, 729, 1218
SatI GCNGC 2 cut(s) 91, 830
Sau3AI GATC 8 cut(s) 45, 181, 277, 352, 535, 542, 577, 1204
Sau96I GGNCC 4 cut(s) 7, 394, 420, 1077
SchI GAGTC 2 cut(s) 363, 998
ScrFI CCNGG 2 cut(s) 619, 1146
SfaNI GCATC 2 cut(s) 141, 1081
SinI GGWCC 4 cut(s) 7, 394, 420, 1077
SmiMI CAYNNNNRTG 1 cut(s) 273
Sse9I AATT 9 cut(s) 140, 560, 675, 700, 819, 866, 900, 1007, 1108
SsiI CCGC 6 cut(s) 5, 20, 67, 91, 830, 986
SspI AATATT 1 cut(s) 404
SspMI CTAG 3 cut(s) 356, 366, 446
StyD4I CCNGG 2 cut(s) 617, 1144
StyI CCWWGG 2 cut(s) 423, 1197
TaaI ACNGT 4 cut(s) 207, 308, 876, 1159
TaiI ACGT 1 cut(s) 1182
TaqI TCGA 3 cut(s) 246, 252, 611
TasI AATT 9 cut(s) 140, 560, 675, 700, 819, 866, 900, 1007, 1108
TatI WGTACW 1 cut(s) 1104
TauI GCSGC 2 cut(s) 93, 832
TfiI GAWTC 6 cut(s) 58, 230, 464, 849, 1141, 1243
Tru1I TTAA 6 cut(s) 318, 548, 597, 606, 729, 1218
Tru9I TTAA 6 cut(s) 318, 548, 597, 606, 729, 1218
TscAI CASTG 8 cut(s) 220, 388, 415, 592, 831, 922, 1093, 1162
TseFI GTSAC 1 cut(s) 361
Tsp45I GTSAC 1 cut(s) 361
TspDTI ATGAA 5 cut(s) 234, 254, 731, 983, 1038
TspRI CASTG 8 cut(s) 220, 388, 415, 592, 831, 922, 1093, 1162
VpaK11BI GGWCC 4 cut(s) 7, 394, 420, 1077
XapI RAATTY 4 cut(s) 675, 700, 819, 1007
XcmI CCANNNNNNNNNTGG 2 cut(s) 560, 1093
XspI CTAG 3 cut(s) 356, 366, 446
Zsp2I ATGCAT 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.