Rh2AG058700

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000111
Physical Location & Seq
Forward (+)
4745691 .. 4747678
1988 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG058700.1

Sequence Viewer

Length: 1200 bp
ATGGAAGACCATGGCCAGTTGATGGGCCTCCAAACTGTCGACCTTCCACCCGAGATCGTGTATGAAATTATTTCAAGGCTACCAGTGAAGCCCTTGTGCCGCCTCAAGTGTGTATCAAAGCCATGGCGGTCCCTAATCTCCCATCCTGATTTCGTTGCAAAGTACTCCAAAGCTGTTGAGAATAAGGATGTATTCTTCCAAAGACGGCGCCTCCTGTTTACTTTTGCTGCCCCCGGGCATCATTGGCTTTACTCTTTGGATCTTAACCAGTTTCTCAATGAGAATCATAATGTTGATGTTGATAGTTTAGTAGCAGCACCCACTGAGCTCGACTTTGTTTACAAGCATCTTCCAAATGGTGGACGGGGTTGGGTTCCCTTTGTTCATTATTCCTGCTATGGCTTGTTCTTGTCCAAGTTATGTTCTGGGGACTTCAGTTTCAGTTTGATCAACCCTGTAACCAAGGAATCAAAGACACTACCAAAGGCACCAATATGGAGACTACCAATGAAGCCCTATTTTTGGCACTTATATGGACTTGGATTTGATTACTCCACCAATGAATACAAGGTAATTAACGGGCAGGATTATTGTGATGGAATTATTTTCAGTGTCTATACATTGAAGACTGATTCTTGGCGACAGATTGAGTGCTTATTTCCCTACAAAGCTAAAGATTATGATGGGATCCTGGTGAATGGTGCTGTTCATTGGTTGGTGAGGAAGGTTGCAGATCGATCATTAGTGATTATATCTTTCCTTTTAACAGAGGAGGAGGTTAGAGAAATTCCATTCCCGCCCATTCCCAGTACTCATTCAAGTCAACTGACGGTATTCAGAAATTGGCTATGTATAACATCAGGATCAACACGGACTGAAGGAGTAACATTTAATGAGTTATGGGTCATGAAGGAATATGGAGTGAGGGAGTCTTGGACTAAAATGCAGGTCTGCAAACCATATCGCAAATTATCACATTCCGGTTTCTGGACAAAATCTCATGATCTGATGGTTTTTGATAGGTCATCATTAGTTATGTACAACTTTGATGATGGAACATTTTGGAATCTATCAATTGGTTGTCTTAGCGAATTAGATGGTGGTTTTGGTAGCGTTGGTATCTATGTGGAGAGCCTCCTACCTTCACTCACCGATCAAGAACAGTGTAAGAGGATTAAAGAAGATGAATCCACTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

399

Amino Acids

46.07

Weight (kDa)

6.46

Isoelectric Point (pI)

40.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 51 4.4e-10 F-box domain
F-box-like PF12937 14 - 49 5.1e-08 F-box-like
FBA_1 PF07734 130 - 359 7.1e-18 F-box associated beta propeller domain
FBA_3 PF08268 140 - 324 2e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 937
AccB1I GGYRCC 2 cut(s) 207, 487
AccB7I CCANNNNNTGG 2 cut(s) 22, 359
AccI GTMKAC 1 cut(s) 39
AciI CCGC 3 cut(s) 100, 127, 797
AclWI GGATC 4 cut(s) 267, 682, 695, 871
AcoI YGGCCR 1 cut(s) 13
AcsI RAATTY 1 cut(s) 786
AcuI CTGAAG 2 cut(s) 418, 897
AcyI GRCGYC 1 cut(s) 208
AdeI CACNNNGTG 1 cut(s) 1197
AfaI GTAC 3 cut(s) 164, 811, 1040
AfiI CCNNNNNNNGG 4 cut(s) 22, 359, 522, 987
AgsI TTSAA 3 cut(s) 75, 625, 819
AjnI CCWGG 1 cut(s) 690
AluBI AGCT 3 cut(s) 173, 328, 671
AluI AGCT 3 cut(s) 173, 328, 671
Alw21I GWGCWC 1 cut(s) 330
Alw26I GTCTC 1 cut(s) 493
AlwI GGATC 4 cut(s) 267, 682, 695, 871
Ama87I CYCGRG 2 cut(s) 50, 233
AoxI GGCC 2 cut(s) 13, 25
ApeKI GCWGC 2 cut(s) 227, 314
ApoI RAATTY 1 cut(s) 786
AspLEI GCGC 1 cut(s) 210
AspS9I GGNCC 2 cut(s) 25, 129
AsuC2I CCSGG 2 cut(s) 234, 235
AsuHPI GGTGA 3 cut(s) 706, 730, 1141
AvaI CYCGRG 2 cut(s) 50, 233
AvaII GGWCC 1 cut(s) 129
BalI TGGCCA 1 cut(s) 15
BamHI GGATCC 1 cut(s) 687
BanI GGYRCC 2 cut(s) 207, 487
BanII GRGCYC 1 cut(s) 330
BbsI GAAGAC 2 cut(s) 12, 632
Bbv12I GWGCWC 1 cut(s) 330
BbvI GCAGC 2 cut(s) 214, 326
BccI CCATC 7 cut(s) 16, 150, 590, 677, 1003, 1046, 1091
BceAI ACGGC 1 cut(s) 221
BciT130I CCWGG 1 cut(s) 692
BclI TGATCA 1 cut(s) 447
BcnI CCSGG 2 cut(s) 234, 235
BcoDI GTCTC 1 cut(s) 493
BfoI RGCGCY 1 cut(s) 211
BfuAI ACCTGC 1 cut(s) 937
BisI GCNGC 3 cut(s) 100, 228, 315
BlsI GCNGC 3 cut(s) 101, 229, 316
BmcAI AGTACT 2 cut(s) 164, 811
Bme1390I CCNGG 3 cut(s) 234, 235, 692
Bme18I GGWCC 1 cut(s) 129
BmeT110I CYCGRG 2 cut(s) 50, 233
BmgT120I GGNCC 2 cut(s) 25, 129
BmiI GGNNCC 5 cut(s) 131, 209, 375, 489, 689
BmrFI CCNGG 3 cut(s) 234, 235, 692
BmrI ACTGGG 1 cut(s) 801
BmsI GCATC 2 cut(s) 247, 355
BmuI ACTGGG 1 cut(s) 801
BpiI GAAGAC 2 cut(s) 12, 632
BpuEI CTTGAG 1 cut(s) 89
BpuMI CCSGG 2 cut(s) 234, 235
Bsa29I ATCGAT 1 cut(s) 736
BsaHI GRCGYC 1 cut(s) 208
BsaJI CCNNGG 5 cut(s) 10, 122, 232, 233, 462
BsaWI WCCGGW 1 cut(s) 980
BsaXI ACNNNNNCTCC 2 cut(s) 195, 225
Bsc4I CCNNNNNNNGG 4 cut(s) 22, 359, 522, 987
Bse1I ACTGG 4 cut(s) 16, 83, 268, 807
BseBI CCWGG 1 cut(s) 692
BseCI ATCGAT 1 cut(s) 736
BseDI CCNNGG 5 cut(s) 10, 122, 232, 233, 462
BseGI GGATG 2 cut(s) 142, 193
BseLI CCNNNNNNNGG 4 cut(s) 22, 359, 522, 987
BseMII CTCAG 1 cut(s) 315
BseNI ACTGG 4 cut(s) 16, 83, 268, 807
BseRI GAGGAG 2 cut(s) 785, 788
BseXI GCAGC 2 cut(s) 214, 326
BshFI GGCC 2 cut(s) 15, 27
BshNI GGYRCC 2 cut(s) 207, 487
BshVI ATCGAT 1 cut(s) 736
BsiHKAI GWGCWC 1 cut(s) 330
BsiHKCI CYCGRG 2 cut(s) 50, 233
BsiSI CCGG 2 cut(s) 234, 981
BslFI GGGAC 2 cut(s) 115, 443
BslI CCNNNNNNNGG 4 cut(s) 22, 359, 522, 987
BsmAI GTCTC 1 cut(s) 493
BsmFI GGGAC 2 cut(s) 115, 443
BsnI GGCC 2 cut(s) 15, 27
BsoBI CYCGRG 2 cut(s) 50, 233
Bsp1286I GDGCHC 1 cut(s) 330
Bsp1407I TGTACA 1 cut(s) 1038
Bsp143I GATC 9 cut(s) 54, 259, 447, 687, 733, 737, 863, 1003, 1153
Bsp19I CCATGG 2 cut(s) 10, 122
BspACI CCGC 3 cut(s) 100, 127, 797
BspANI GGCC 2 cut(s) 15, 27
BspCNI CTCAG 1 cut(s) 316
BspDI ATCGAT 1 cut(s) 736
BspHI TCATGA 2 cut(s) 906, 1000
BspLI GGNNCC 5 cut(s) 131, 209, 375, 489, 689
BspMI ACCTGC 1 cut(s) 937
BspPI GGATC 4 cut(s) 267, 682, 695, 871
BspT107I GGYRCC 2 cut(s) 207, 487
BsrGI TGTACA 1 cut(s) 1038
BsrI ACTGG 4 cut(s) 16, 83, 268, 807
BssECI CCNNGG 5 cut(s) 10, 122, 232, 233, 462
BssMI GATC 9 cut(s) 54, 259, 447, 687, 733, 737, 863, 1003, 1153
BssNI GRCGYC 1 cut(s) 208
BssT1I CCWWGG 3 cut(s) 10, 122, 462
Bst2UI CCWGG 1 cut(s) 692
Bst4CI ACNGT 3 cut(s) 37, 832, 1164
BstACI GRCGYC 1 cut(s) 208
BstAUI TGTACA 1 cut(s) 1038
BstDEI CTNAG 3 cut(s) 324, 1085, 1194
BstDSI CCRYGG 2 cut(s) 10, 122
BstF5I GGATG 2 cut(s) 142, 193
BstH2I RGCGCY 1 cut(s) 211
BstHHI GCGC 1 cut(s) 210
BstKTI GATC 9 cut(s) 57, 262, 450, 690, 736, 740, 866, 1006, 1156
BstMAI GTCTC 1 cut(s) 493
BstMBI GATC 9 cut(s) 54, 259, 447, 687, 733, 737, 863, 1003, 1153
BstMWI GCNNNNNNNGC 1 cut(s) 244
BstNI CCWGG 1 cut(s) 692
BstSCI CCNGG 3 cut(s) 232, 233, 690
BstV1I GCAGC 2 cut(s) 214, 326
BstV2I GAAGAC 2 cut(s) 12, 632
BstX2I RGATCY 2 cut(s) 259, 687
BstYI RGATCY 2 cut(s) 259, 687
Bsu15I ATCGAT 1 cut(s) 736
BsuRI GGCC 2 cut(s) 15, 27
BsuTUI ATCGAT 1 cut(s) 736
BtgI CCRYGG 2 cut(s) 10, 122
BtsCI GGATG 2 cut(s) 142, 193
BtsIMutI CAGTG 4 cut(s) 90, 321, 616, 1169
BveI ACCTGC 1 cut(s) 937
CciI TCATGA 2 cut(s) 906, 1000
CfoI GCGC 1 cut(s) 210
Cfr13I GGNCC 2 cut(s) 25, 129
Cfr9I CCCGGG 1 cut(s) 233
ClaI ATCGAT 1 cut(s) 736
Csp6I GTAC 3 cut(s) 163, 810, 1039
CviAII CATG 4 cut(s) 11, 123, 907, 1001
CviQI GTAC 3 cut(s) 163, 810, 1039
DdeI CTNAG 3 cut(s) 324, 1085, 1194
DinI GGCGCC 1 cut(s) 209
DpnI GATC 9 cut(s) 56, 261, 449, 689, 735, 739, 865, 1005, 1155
DpnII GATC 9 cut(s) 54, 259, 447, 687, 733, 737, 863, 1003, 1153
DraIII CACNNNGTG 1 cut(s) 1197
EaeI YGGCCR 1 cut(s) 13
Ecl136II GAGCTC 1 cut(s) 328
Eco130I CCWWGG 3 cut(s) 10, 122, 462
Eco24I GRGCYC 1 cut(s) 330
Eco47I GGWCC 1 cut(s) 129
Eco53kI GAGCTC 1 cut(s) 328
Eco57I CTGAAG 2 cut(s) 418, 897
Eco88I CYCGRG 2 cut(s) 50, 233
EcoICRI GAGCTC 1 cut(s) 328
EcoRII CCWGG 1 cut(s) 690
EcoT14I CCWWGG 3 cut(s) 10, 122, 462
EcoT38I GRGCYC 1 cut(s) 330
EgeI GGCGCC 1 cut(s) 209
EheI GGCGCC 1 cut(s) 209
ErhI CCWWGG 3 cut(s) 10, 122, 462
FaeI CATG 4 cut(s) 14, 126, 910, 1004
FaqI GGGAC 2 cut(s) 115, 443
FatI CATG 4 cut(s) 10, 122, 906, 1000
FauI CCCGC 1 cut(s) 804
FbaI TGATCA 1 cut(s) 447
FblI GTMKAC 1 cut(s) 39
Fnu4HI GCNGC 3 cut(s) 100, 228, 315
FokI GGATG 2 cut(s) 129, 200
FriOI GRGCYC 1 cut(s) 330
Fsp4HI GCNGC 3 cut(s) 100, 228, 315
GlaI GCGC 1 cut(s) 209
GluI GCNGC 3 cut(s) 100, 228, 315
HaeII RGCGCY 1 cut(s) 211
HaeIII GGCC 2 cut(s) 15, 27
HapII CCGG 2 cut(s) 234, 981
HhaI GCGC 1 cut(s) 210
Hin1I GRCGYC 1 cut(s) 208
Hin1II CATG 4 cut(s) 14, 126, 910, 1004
Hin6I GCGC 1 cut(s) 208
HinP1I GCGC 1 cut(s) 208
HincII GTYRAC 2 cut(s) 40, 824
HindII GTYRAC 2 cut(s) 40, 824
HinfI GANTC 6 cut(s) 283, 467, 632, 929, 1066, 1187
HpaII CCGG 2 cut(s) 234, 981
HphI GGTGA 3 cut(s) 706, 730, 1141
Hpy166II GTNNAC 5 cut(s) 40, 219, 340, 362, 824
Hpy188I TCNGA 2 cut(s) 839, 1008
Hpy188III TCNNGA 6 cut(s) 146, 861, 907, 988, 1001, 1157
Hpy8I GTNNAC 5 cut(s) 40, 219, 340, 362, 824
HpyAV CCTTC 5 cut(s) 53, 718, 872, 904, 1152
HpyCH4III ACNGT 3 cut(s) 37, 832, 1164
HpyCH4V TGCA 4 cut(s) 158, 731, 946, 954
HpyF10VI GCNNNNNNNGC 1 cut(s) 244
HpyF3I CTNAG 3 cut(s) 324, 1085, 1194
Hsp92I GRCGYC 1 cut(s) 208
Hsp92II CATG 4 cut(s) 14, 126, 910, 1004
HspAI GCGC 1 cut(s) 208
KasI GGCGCC 1 cut(s) 207
Ksp22I TGATCA 1 cut(s) 447
Kzo9I GATC 9 cut(s) 54, 259, 447, 687, 733, 737, 863, 1003, 1153
Lsp1109I GCAGC 2 cut(s) 214, 326
LweI GCATC 2 cut(s) 247, 355
MaeIII GTNAC 2 cut(s) 457, 883
MalI GATC 9 cut(s) 56, 261, 449, 689, 735, 739, 865, 1005, 1155
MboI GATC 9 cut(s) 54, 259, 447, 687, 733, 737, 863, 1003, 1153
MboII GAAGA 5 cut(s) 17, 187, 341, 637, 1193
MfeI CAATTG 1 cut(s) 1074
MflI RGATCY 2 cut(s) 259, 687
MhlI GDGCHC 1 cut(s) 330
MlsI TGGCCA 1 cut(s) 15
MluCI AATT 8 cut(s) 66, 573, 600, 786, 841, 968, 1074, 1091
MluNI TGGCCA 1 cut(s) 15
Mly113I GGCGCC 1 cut(s) 208
MlyI GAGTC 1 cut(s) 938
Mox20I TGGCCA 1 cut(s) 15
MscI TGGCCA 1 cut(s) 15
MseI TTAA 5 cut(s) 264, 576, 764, 891, 1176
MslI CAYNNNNRTG 2 cut(s) 493, 531
Msp20I TGGCCA 1 cut(s) 15
MspI CCGG 2 cut(s) 234, 981
MspR9I CCNGG 3 cut(s) 234, 235, 692
MunI CAATTG 1 cut(s) 1074
MvaI CCWGG 1 cut(s) 692
MwoI GCNNNNNNNGC 1 cut(s) 244
NarI GGCGCC 1 cut(s) 208
NciI CCSGG 2 cut(s) 234, 235
NcoI CCATGG 2 cut(s) 10, 122
NdeII GATC 9 cut(s) 54, 259, 447, 687, 733, 737, 863, 1003, 1153
NlaIII CATG 4 cut(s) 14, 126, 910, 1004
NlaIV GGNNCC 5 cut(s) 131, 209, 375, 489, 689
PagI TCATGA 2 cut(s) 906, 1000
PfeI GAWTC 5 cut(s) 283, 467, 632, 1066, 1187
PflMI CCANNNNNTGG 2 cut(s) 22, 359
PkrI GCNGC 3 cut(s) 101, 229, 316
PleI GAGTC 1 cut(s) 937
PluTI GGCGCC 1 cut(s) 211
PpsI GAGTC 1 cut(s) 937
Psp124BI GAGCTC 1 cut(s) 330
Psp6I CCWGG 1 cut(s) 690
PspGI CCWGG 1 cut(s) 690
PspN4I GGNNCC 5 cut(s) 131, 209, 375, 489, 689
PspPI GGNCC 2 cut(s) 25, 129
PsuI RGATCY 2 cut(s) 259, 687
RsaI GTAC 3 cut(s) 164, 811, 1040
RsaNI GTAC 3 cut(s) 163, 810, 1039
RseI CAYNNNNRTG 2 cut(s) 493, 531
SacI GAGCTC 1 cut(s) 330
SalI GTCGAC 1 cut(s) 38
SaqAI TTAA 5 cut(s) 264, 576, 764, 891, 1176
SatI GCNGC 3 cut(s) 100, 228, 315
Sau3AI GATC 9 cut(s) 54, 259, 447, 687, 733, 737, 863, 1003, 1153
Sau96I GGNCC 2 cut(s) 25, 129
ScaI AGTACT 2 cut(s) 164, 811
SchI GAGTC 1 cut(s) 938
ScrFI CCNGG 3 cut(s) 234, 235, 692
SduI GDGCHC 1 cut(s) 330
SfaNI GCATC 2 cut(s) 247, 355
SfoI GGCGCC 1 cut(s) 209
SinI GGWCC 1 cut(s) 129
SmaI CCCGGG 1 cut(s) 235
SmiMI CAYNNNNRTG 2 cut(s) 493, 531
SmlI CTYRAG 1 cut(s) 104
SmoI CTYRAG 1 cut(s) 104
Sse9I AATT 8 cut(s) 66, 573, 600, 786, 841, 968, 1074, 1091
SsiI CCGC 3 cut(s) 100, 127, 797
SspDI GGCGCC 1 cut(s) 207
SstI GAGCTC 1 cut(s) 330
StyD4I CCNGG 3 cut(s) 232, 233, 690
StyI CCWWGG 3 cut(s) 10, 122, 462
TaaI ACNGT 3 cut(s) 37, 832, 1164
TaqI TCGA 3 cut(s) 39, 330, 736
TasI AATT 8 cut(s) 66, 573, 600, 786, 841, 968, 1074, 1091
TatI WGTACW 3 cut(s) 162, 809, 1038
TauI GCSGC 1 cut(s) 102
TfiI GAWTC 5 cut(s) 283, 467, 632, 1066, 1187
Tru1I TTAA 5 cut(s) 264, 576, 764, 891, 1176
Tru9I TTAA 5 cut(s) 264, 576, 764, 891, 1176
TscAI CASTG 4 cut(s) 90, 328, 616, 1169
TseI GCWGC 2 cut(s) 227, 314
TspDTI ATGAA 7 cut(s) 78, 374, 524, 576, 698, 923, 1200
TspGWI ACGGA 1 cut(s) 886
TspMI CCCGGG 1 cut(s) 233
TspRI CASTG 4 cut(s) 90, 328, 616, 1169
Van91I CCANNNNNTGG 2 cut(s) 22, 359
VpaK11BI GGWCC 1 cut(s) 129
XapI RAATTY 1 cut(s) 786
XmaI CCCGGG 1 cut(s) 233
XmiI GTMKAC 1 cut(s) 39
ZrmI AGTACT 2 cut(s) 164, 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.