Rroxscaffold_1G00009230

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000111
Physical Location & Seq
Forward (+)
11605056 .. 11606186
1131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00009230.1

Sequence Viewer

Length: 1131 bp
ATGGCGGACGAACCGACGGAACTCCCAAACCTTCCAATGGAGATCATTCGCGAGATTCTCACCTGGCTTCCGGTGAAGCCGTTATGCAGATTCAGGTGCGTATCGAAGTCATGGAATTCCCTAACTTTTGAGCCCAAATTTGTGAAAATGCATTTTAACAAAGCCCTTGAGCACGACGATGTACTCTACCAAAGACGAAGAGTCATGGTCAGCGACTGCAATTCCGGCAAGTTTTACTCTTTTAACTTAGATGAGTTTCTCAATCATGATCATATTGATAATATTGGTGGTGGTGGTGAGAATCATGAACTGTTAGTCACTGAAGTCGATAGAGTCGGAGATGTTTCGGGTTGCTTTGTTTTTTACTCCAATGCCTTGTTGTTGTTCCAGTCAAATGAGAGGTTTTCCTTGTTTAACCCGGTAACCAGGGAATCCAAGGTAGTACCTGAGTTTCCAAGACTTGGTCCATGGAGTAGAATTTATGGGAAGCTATATGGATTTGGCTTTGATCCGTCCACCCAAGATTACAAGATGGTTTATGGGATTAGTGGAGTTTGCTCTACAACCGAACTTAAGTTTAGTGTCTATTCATTGAAAACCGGTTCTTGGCGAGTTATTGAGAAGGGATATCCCTATCAAAGTTTACACCATGGTATGCAGGGAAGACTGCTGAATGGAGGTATTCATTGGTTGGTTTATAGAGACTATAGAGATGCATCATCTATGGTTCTGTTATCTTTTGTTTTGGCAGAGGAGGAAGTGCAAGAGATTCCACTACTGCCTCGTGTCAATATCGACGGGGAAGATGTTTATTTAAGTGTCTTCAGAGACTGCCTGTGTATGATACTGGGGTATAATGAGGAGCTTTGGGTCATGAAGGAATATGGAGTGAGAGAGTCTTGGACTAAAATAAGGATATCCATCCCGCCTTGTCAGTGGTTAAACTCGGGGTTCAGGAAGAAAAATTATGATCTACTGCTGTTGGAAGATGCCGAAGACAAGTTGGTTCTGCTCAATTTTGATGAGGACACCTTTCGCAATCTATCAATTCGTGGAGTTTCGCAAGTTGGTTATGTTGTGGTCTACTTGGAGAGCCTCGTCTCACCCAATTACTTTGGCATCACTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

376

Amino Acids

43.56

Weight (kDa)

5.33

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 8 - 45 1.7e-10 F-box domain
F-box-like PF12937 9 - 46 8.4e-08 F-box-like
FBA_1 PF07734 111 - 368 1.4e-21 F-box associated beta propeller domain
FBA_3 PF08268 118 - 317 2.6e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 461
AccI GTMKAC 1 cut(s) 1083
AccII CGCG 1 cut(s) 51
AciI CCGC 2 cut(s) 5, 926
AclWI GGATC 1 cut(s) 503
AcsI RAATTY 3 cut(s) 115, 137, 477
AcuI CTGAAG 2 cut(s) 342, 808
AfaI GTAC 2 cut(s) 183, 444
AfiI CCNNNNNNNGG 3 cut(s) 37, 461, 606
AflII CTTAAG 1 cut(s) 572
AgeI ACCGGT 1 cut(s) 599
AgsI TTSAA 1 cut(s) 595
AhdI GACNNNNNGTC 1 cut(s) 200
AjnI CCWGG 2 cut(s) 62, 425
AluBI AGCT 2 cut(s) 490, 865
AluI AGCT 2 cut(s) 490, 865
Alw21I GWGCWC 1 cut(s) 174
Alw26I GTCTC 3 cut(s) 696, 822, 1105
AlwI GGATC 1 cut(s) 503
AlwNI CAGNNNCTG 2 cut(s) 216, 831
Ama87I CYCGRG 1 cut(s) 946
ApoI RAATTY 3 cut(s) 115, 137, 477
AsiGI ACCGGT 1 cut(s) 599
AspS9I GGNCC 1 cut(s) 464
AsuC2I CCSGG 1 cut(s) 419
AsuHPI GGTGA 4 cut(s) 52, 85, 308, 1095
AvaI CYCGRG 1 cut(s) 946
AvaII GGWCC 1 cut(s) 464
BaeI ACNNNNGTAYC 2 cut(s) 836, 869
BanII GRGCYC 1 cut(s) 135
BauI CACGAG 1 cut(s) 783
BbsI GAAGAC 3 cut(s) 670, 814, 1002
Bbv12I GWGCWC 1 cut(s) 174
BccI CCATC 2 cut(s) 526, 929
BceAI ACGGC 1 cut(s) 64
BciT130I CCWGG 2 cut(s) 64, 427
BclI TGATCA 1 cut(s) 268
BcnI CCSGG 1 cut(s) 419
BcoDI GTCTC 3 cut(s) 696, 822, 1105
BfmI CTRYAG 1 cut(s) 706
BfrI CTTAAG 1 cut(s) 572
Bme1390I CCNGG 3 cut(s) 64, 419, 427
Bme18I GGWCC 1 cut(s) 464
BmeRI GACNNNNNGTC 1 cut(s) 200
BmeT110I CYCGRG 1 cut(s) 946
BmgT120I GGNCC 1 cut(s) 464
BmrFI CCNGG 3 cut(s) 64, 419, 427
BmrI ACTGGG 1 cut(s) 857
BmsI GCATC 3 cut(s) 703, 725, 979
BmuI ACTGGG 1 cut(s) 857
BpiI GAAGAC 3 cut(s) 670, 814, 1002
BpuEI CTTGAG 1 cut(s) 188
BpuMI CCSGG 1 cut(s) 419
BsaBI GATNNNNATC 1 cut(s) 920
BsaJI CCNNGG 4 cut(s) 426, 435, 467, 649
BsaWI WCCGGW 2 cut(s) 70, 599
Bsc4I CCNNNNNNNGG 3 cut(s) 37, 461, 606
Bse118I RCCGGY 1 cut(s) 599
Bse1I ACTGG 2 cut(s) 388, 852
Bse8I GATNNNNATC 1 cut(s) 920
BseBI CCWGG 2 cut(s) 64, 427
BseDI CCNNGG 4 cut(s) 426, 435, 467, 649
BseGI GGATG 1 cut(s) 921
BseJI GATNNNNATC 1 cut(s) 920
BseLI CCNNNNNNNGG 3 cut(s) 37, 461, 606
BseMII CTCAG 1 cut(s) 438
BseNI ACTGG 2 cut(s) 388, 852
BseRI GAGGAG 2 cut(s) 767, 875
Bsh1236I CGCG 1 cut(s) 51
BshTI ACCGGT 1 cut(s) 599
BsiHKAI GWGCWC 1 cut(s) 174
BsiHKCI CYCGRG 1 cut(s) 946
BsiSI CCGG 4 cut(s) 71, 225, 419, 600
BslI CCNNNNNNNGG 3 cut(s) 37, 461, 606
BsmAI GTCTC 3 cut(s) 696, 822, 1105
BsmBI CGTCTC 1 cut(s) 1105
BsoBI CYCGRG 1 cut(s) 946
Bsp1286I GDGCHC 2 cut(s) 135, 174
Bsp143I GATC 4 cut(s) 42, 268, 508, 970
Bsp19I CCATGG 2 cut(s) 467, 649
Bsp68I TCGCGA 1 cut(s) 51
BspACI CCGC 2 cut(s) 5, 926
BspCNI CTCAG 1 cut(s) 439
BspFNI CGCG 1 cut(s) 51
BspHI TCATGA 3 cut(s) 265, 304, 873
BspPI GGATC 1 cut(s) 503
BspTI CTTAAG 1 cut(s) 572
BsrFI RCCGGY 1 cut(s) 599
BsrI ACTGG 2 cut(s) 388, 852
BssAI RCCGGY 1 cut(s) 599
BssECI CCNNGG 4 cut(s) 426, 435, 467, 649
BssMI GATC 4 cut(s) 42, 268, 508, 970
BssSI CACGAG 1 cut(s) 783
BssT1I CCWWGG 3 cut(s) 435, 467, 649
Bst2BI CACGAG 1 cut(s) 783
Bst2UI CCWGG 2 cut(s) 64, 427
Bst4CI ACNGT 1 cut(s) 312
Bst6I CTCTTC 1 cut(s) 193
BstAFI CTTAAG 1 cut(s) 572
BstDEI CTNAG 2 cut(s) 247, 447
BstDSI CCRYGG 2 cut(s) 467, 649
BstEII GGTNACC 1 cut(s) 421
BstF5I GGATG 1 cut(s) 921
BstFNI CGCG 1 cut(s) 51
BstKTI GATC 4 cut(s) 45, 271, 511, 973
BstMAI GTCTC 3 cut(s) 696, 822, 1105
BstMBI GATC 4 cut(s) 42, 268, 508, 970
BstMWI GCNNNNNNNGC 1 cut(s) 225
BstNI CCWGG 2 cut(s) 64, 427
BstPI GGTNACC 1 cut(s) 421
BstSCI CCNGG 3 cut(s) 62, 417, 425
BstSFI CTRYAG 1 cut(s) 706
BstUI CGCG 1 cut(s) 51
BstV2I GAAGAC 3 cut(s) 670, 814, 1002
BtgI CCRYGG 2 cut(s) 467, 649
BtsCI GGATG 1 cut(s) 921
BtsIMutI CAGTG 3 cut(s) 318, 941, 1122
BtuMI TCGCGA 1 cut(s) 51
CaiI CAGNNNCTG 2 cut(s) 216, 831
CciI TCATGA 3 cut(s) 265, 304, 873
Cfr10I RCCGGY 1 cut(s) 599
Cfr13I GGNCC 1 cut(s) 464
Csp6I GTAC 2 cut(s) 182, 443
CspAI ACCGGT 1 cut(s) 599
CviAII CATG 7 cut(s) 111, 205, 266, 305, 468, 650, 874
CviJI RGCY 8 cut(s) 67, 79, 133, 164, 490, 504, 865, 1095
CviKI_1 RGCY 8 cut(s) 67, 79, 133, 164, 490, 504, 865, 1095
CviQI GTAC 2 cut(s) 182, 443
DdeI CTNAG 2 cut(s) 247, 447
DpnI GATC 4 cut(s) 44, 270, 510, 972
DpnII GATC 4 cut(s) 42, 268, 508, 970
DriI GACNNNNNGTC 1 cut(s) 200
Eam1104I CTCTTC 1 cut(s) 193
Eam1105I GACNNNNNGTC 1 cut(s) 200
EarI CTCTTC 1 cut(s) 193
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 3 cut(s) 435, 467, 649
Eco24I GRGCYC 1 cut(s) 135
Eco32I GATATC 2 cut(s) 629, 918
Eco47I GGWCC 1 cut(s) 464
Eco57I CTGAAG 2 cut(s) 342, 808
Eco88I CYCGRG 1 cut(s) 946
Eco91I GGTNACC 1 cut(s) 421
EcoO65I GGTNACC 1 cut(s) 421
EcoRI GAATTC 1 cut(s) 115
EcoRII CCWGG 2 cut(s) 62, 425
EcoRV GATATC 2 cut(s) 629, 918
EcoT14I CCWWGG 3 cut(s) 435, 467, 649
EcoT22I ATGCAT 2 cut(s) 153, 718
EcoT38I GRGCYC 1 cut(s) 135
ErhI CCWWGG 3 cut(s) 435, 467, 649
Esp3I CGTCTC 1 cut(s) 1105
FaeI CATG 7 cut(s) 114, 208, 269, 308, 471, 653, 877
FatI CATG 7 cut(s) 110, 204, 265, 304, 467, 649, 873
FauI CCCGC 1 cut(s) 933
FbaI TGATCA 1 cut(s) 268
FblI GTMKAC 1 cut(s) 1083
FokI GGATG 1 cut(s) 908
FriOI GRGCYC 1 cut(s) 135
HapII CCGG 4 cut(s) 71, 225, 419, 600
Hin1II CATG 7 cut(s) 114, 208, 269, 308, 471, 653, 877
HinfI GANTC 8 cut(s) 55, 90, 201, 301, 333, 431, 769, 896
HpaII CCGG 4 cut(s) 71, 225, 419, 600
HphI GGTGA 4 cut(s) 52, 85, 308, 1095
Hpy166II GTNNAC 3 cut(s) 516, 644, 1084
Hpy188I TCNGA 2 cut(s) 338, 827
Hpy188III TCNNGA 5 cut(s) 50, 266, 305, 874, 955
Hpy8I GTNNAC 3 cut(s) 516, 644, 1084
Hpy99I CGWCG 3 cut(s) 19, 179, 800
HpyAV CCTTC 3 cut(s) 41, 616, 871
HpyCH4III ACNGT 1 cut(s) 312
HpyCH4V TGCA 6 cut(s) 87, 151, 219, 658, 716, 763
HpyF10VI GCNNNNNNNGC 1 cut(s) 225
HpyF3I CTNAG 2 cut(s) 247, 447
Hsp92II CATG 7 cut(s) 114, 208, 269, 308, 471, 653, 877
Ksp22I TGATCA 1 cut(s) 268
Kzo9I GATC 4 cut(s) 42, 268, 508, 970
LmnI GCTCC 1 cut(s) 862
LweI GCATC 3 cut(s) 703, 725, 979
MaeIII GTNAC 2 cut(s) 316, 421
MalI GATC 4 cut(s) 44, 270, 510, 972
MboI GATC 4 cut(s) 42, 268, 508, 970
MboII GAAGA 7 cut(s) 210, 675, 814, 815, 970, 998, 1007
MhlI GDGCHC 2 cut(s) 135, 174
MluCI AATT 8 cut(s) 115, 137, 220, 477, 964, 1015, 1047, 1108
MlyI GAGTC 3 cut(s) 210, 342, 905
MmeI TCCRAC 2 cut(s) 316, 963
MnlI CCTC 8 cut(s) 393, 671, 745, 748, 792, 853, 1018, 1106
Mph1103I ATGCAT 2 cut(s) 153, 718
MseI TTAA 6 cut(s) 156, 243, 414, 573, 815, 941
MslI CAYNNNNRTG 1 cut(s) 177
MspCI CTTAAG 1 cut(s) 572
MspI CCGG 4 cut(s) 71, 225, 419, 600
MspR9I CCNGG 3 cut(s) 64, 419, 427
MvaI CCWGG 2 cut(s) 64, 427
MvnI CGCG 1 cut(s) 51
MwoI GCNNNNNNNGC 1 cut(s) 225
NciI CCSGG 1 cut(s) 419
NcoI CCATGG 2 cut(s) 467, 649
NdeII GATC 4 cut(s) 42, 268, 508, 970
NlaIII CATG 7 cut(s) 114, 208, 269, 308, 471, 653, 877
NmuCI GTSAC 1 cut(s) 316
NruI TCGCGA 1 cut(s) 51
NsiI ATGCAT 2 cut(s) 153, 718
PagI TCATGA 3 cut(s) 265, 304, 873
PfeI GAWTC 5 cut(s) 55, 90, 301, 431, 769
PflFI GACNNNGTC 1 cut(s) 462
PflMI CCANNNNNTGG 1 cut(s) 461
PinAI ACCGGT 1 cut(s) 599
PleI GAGTC 3 cut(s) 209, 341, 904
PpsI GAGTC 3 cut(s) 209, 341, 904
Psp6I CCWGG 2 cut(s) 62, 425
PspEI GGTNACC 1 cut(s) 421
PspGI CCWGG 2 cut(s) 62, 425
PspPI GGNCC 1 cut(s) 464
PstNI CAGNNNCTG 2 cut(s) 216, 831
PsyI GACNNNGTC 1 cut(s) 462
RruI TCGCGA 1 cut(s) 51
RsaI GTAC 2 cut(s) 183, 444
RsaNI GTAC 2 cut(s) 182, 443
RseI CAYNNNNRTG 1 cut(s) 177
SaqAI TTAA 6 cut(s) 156, 243, 414, 573, 815, 941
Sau3AI GATC 4 cut(s) 42, 268, 508, 970
Sau96I GGNCC 1 cut(s) 464
SchI GAGTC 3 cut(s) 210, 342, 905
ScrFI CCNGG 3 cut(s) 64, 419, 427
SduI GDGCHC 2 cut(s) 135, 174
SfaNI GCATC 3 cut(s) 703, 725, 979
SfcI CTRYAG 1 cut(s) 706
SinI GGWCC 1 cut(s) 464
SmiMI CAYNNNNRTG 1 cut(s) 177
SmlI CTYRAG 2 cut(s) 167, 572
SmoI CTYRAG 2 cut(s) 167, 572
Sse9I AATT 8 cut(s) 115, 137, 220, 477, 964, 1015, 1047, 1108
SsiI CCGC 2 cut(s) 5, 926
SspI AATATT 1 cut(s) 283
StyD4I CCNGG 3 cut(s) 62, 417, 425
StyI CCWWGG 3 cut(s) 435, 467, 649
TaaI ACNGT 1 cut(s) 312
TaqI TCGA 3 cut(s) 104, 327, 795
TasI AATT 8 cut(s) 115, 137, 220, 477, 964, 1015, 1047, 1108
TatI WGTACW 1 cut(s) 181
TfiI GAWTC 5 cut(s) 55, 90, 301, 431, 769
Tru1I TTAA 6 cut(s) 156, 243, 414, 573, 815, 941
Tru9I TTAA 6 cut(s) 156, 243, 414, 573, 815, 941
TscAI CASTG 3 cut(s) 325, 941, 1129
TseFI GTSAC 1 cut(s) 316
Tsp45I GTSAC 1 cut(s) 316
TspDTI ATGAA 4 cut(s) 321, 579, 674, 890
TspGWI ACGGA 2 cut(s) 32, 501
TspRI CASTG 3 cut(s) 325, 941, 1129
Tth111I GACNNNGTC 1 cut(s) 462
Van91I CCANNNNNTGG 1 cut(s) 461
Vha464I CTTAAG 1 cut(s) 572
VpaK11BI GGWCC 1 cut(s) 464
XapI RAATTY 3 cut(s) 115, 137, 477
XmiI GTMKAC 1 cut(s) 1083
Zsp2I ATGCAT 2 cut(s) 153, 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.