Rorug05G0416300

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000111
Physical Location & Seq
Forward (+)
57660701 .. 57673491
12791 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0416300.1

Sequence Viewer

Length: 1767 bp
ATGAGCACGAGACCCTCTCTTTCGATACAGGCACAAGAAAATGGAACTGGGTTCTTGAACGTTTTCGGAAAGGGGTCAAATTTGACTAATTGTTGTTTTACTTTTATGGGTTTAGCAGCGGTTGGAGTAGGAAGAGGGTGTATGGATCCTACTCTGAGATTCTCTATCCTGCTGTTGATACTCGGATTCGCTTATGTATCAGTGAATGCCGCATCTTTTAAGAATGATTATGGGCATTGTGAAAGAGTTGTCAAAGGATGGGCATTCTCTTCGCTTAAACAACAAGTTAAAGAAGATAAGCACACACTGAGGGATTTGCTGTTTTTCCTTCACGTCCCCAGAACAGGGGGGCGCACATATTTTCACTGTTTCTTGAGAAAGTTGTATTATAGCTCTCTGGAATGCCCTCGATCTTATGATAAGCTGCGATTTGACCCTAGAAAAAAACAGTGCAGGTTGCTGGTTACTCATGATGATTATAGCATGATGTCGAAACTTCCAAGGGAGAGAACTTCAGTAGTGACAATACTTAGGGATCCAGTTGACCGTGTTTTTAGTTCTTATGAATTTTCGGTAGAGGTAGCTGCTAGGTTTTTGGTACATCCCAACTTGACTTCTGCAACACAAATGGCGAGACGTTTGCGGTTGAAGACTAAAGGAGTAAGCACATTGGACATTTGGCCGTGGAAATATTTGGTTCCATGGATGAGGGAAGACCTTTTTGCTCGGAGAGAGGGTCGAAAGCTTAGTGGCACATTTGAAGTTCAGAGTGATGACCCATACAACTTGGAGGAAATTGTGATGCCATTACATGAATACATCAATCACCCTATAGCTCAAGATATTGTTCACAATGGTGCAACATTCCAGGTAGCAGGATTGACAAACAACTCGTATCAACCTGATTCACACGAAGTGCGCCATTGTGTGCAGAAGTATAAGCTGCTTGGTGAATATGTTCTTCAAGTTGCAAAGAAGAGGTTGGATGATATGTTATATGTTGGTCTCACTGAGGAGCACAGAGAATCTGCAACAATGTTTGCAAATGTGGTTGGTGCCCAGGTGATTTCACAGCTGAGAGGATCAAATTTTAGTGGGGAGATTAATGCTGCTAACGATAAATCTGAGCAGAGCTACCCAGTTTCAGATTCCAAGCCCAGTAATGATGATCTTCAGAGCAGCACTCCAGATGGAAAGGAAAGTGAGATTGCTTCATCTGAAACTGGTGGAGCTGTGAAAGAAAATATGACTGTGGGAGACCTTATGGAAGCTTATGAAGATTGCATTTCTAGTTTACGGGAGGCCCAGACAAGGAGGCGCACCTCATCTTTGAAGAGGATCTCCCCAGCAAACTTTACTAAGGAGGCACGACTTCAGGTTTCTGAAGTGGTTCTCGAGCAGATAAGGCAATTTAACCACCTTGATTTGGAGCTTTATAAATATGCAAAGGATATCTTTACAAAGCGACACAAGCATGCAGTGCAAGCTTTTGGTAGTTCAAGTACTATGGATGCTTTGCCTTTGGATGATAACATTAATCAACTCTTGGAGCACTTCTACGATGACGATACCATTAAGGCTCTTGATTTCCCCATGGAAGACATTGACGCCACAGACGAAGATTGGAAGACTCAACTCCAAGGCCTTGAGCCATACTATGAATCAAATTTCCAGTACCTTTCCACTTCGATGCTGCTGAAAGAGCATATTGTAATTACTGACATACTGCTTGGGAATGATCGGATACCTCATTTATTTTATCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

588

Amino Acids

67.2

Weight (kDa)

6.16

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1437
Acc36I ACCTGC 1 cut(s) 444
AccB1I GGYRCC 1 cut(s) 1055
AciI CCGC 3 cut(s) 119, 210, 643
AclI AACGTT 1 cut(s) 60
AclWI GGATC 6 cut(s) 140, 153, 530, 543, 1090, 1346
AcoI YGGCCR 1 cut(s) 680
AcsI RAATTY 4 cut(s) 79, 566, 1087, 1666
AcuI CTGAAG 4 cut(s) 498, 1157, 1358, 1404
AcyI GRCGYC 1 cut(s) 1608
AdeI CACNNNGTG 1 cut(s) 916
AfaI GTAC 3 cut(s) 600, 1504, 1676
AfiI CCNNNNNNNGG 4 cut(s) 344, 345, 1311, 1426
AgsI TTSAA 6 cut(s) 58, 649, 761, 965, 1333, 1500
AjiI CACGTC 1 cut(s) 334
AjnI CCWGG 2 cut(s) 867, 1059
AleI CACNNNNGTG 1 cut(s) 855
Alw21I GWGCWC 3 cut(s) 8, 1020, 1554
Alw26I GTCTC 4 cut(s) 4, 628, 1010, 1251
AlwI GGATC 6 cut(s) 140, 153, 530, 543, 1090, 1346
Ama87I CYCGRG 1 cut(s) 1394
AoxI GGCC 3 cut(s) 680, 1302, 1642
ApeKI GCWGC 7 cut(s) 116, 424, 584, 943, 1109, 1179, 1693
ApoI RAATTY 4 cut(s) 79, 566, 1087, 1666
AseI ATTAAT 2 cut(s) 1104, 1536
Asp700I GAANNNNTTC 3 cut(s) 62, 957, 1389
AspLEI GCGC 3 cut(s) 354, 921, 1320
AspS9I GGNCC 1 cut(s) 1303
AsuHPI GGTGA 3 cut(s) 818, 962, 1075
AvaI CYCGRG 1 cut(s) 1394
BaeGI GKGCMC 1 cut(s) 1060
BamHI GGATCC 2 cut(s) 145, 535
BanI GGYRCC 1 cut(s) 1055
BauI CACGAG 1 cut(s) 7
BbsI GAAGAC 4 cut(s) 656, 720, 1605, 1634
Bbv12I GWGCWC 3 cut(s) 8, 1020, 1554
BbvI GCAGC 7 cut(s) 128, 411, 571, 930, 1096, 1191, 1680
BccI CCATC 2 cut(s) 252, 1184
BceAI ACGGC 1 cut(s) 667
BcgI CGANNNNNNTGC 4 cut(s) 252, 286, 622, 656
BciT130I CCWGG 2 cut(s) 869, 1061
BciVI GTATCC 1 cut(s) 1737
BcoDI GTCTC 4 cut(s) 4, 628, 1010, 1251
BfaI CTAG 3 cut(s) 438, 588, 1290
BfmI CTRYAG 1 cut(s) 831
BfuAI ACCTGC 1 cut(s) 444
BfuI GTATCC 1 cut(s) 1737
BisI GCNGC 8 cut(s) 117, 210, 425, 585, 944, 1110, 1180, 1694
BlsI GCNGC 8 cut(s) 118, 211, 426, 586, 945, 1111, 1181, 1695
BmcAI AGTACT 1 cut(s) 1504
Bme1390I CCNGG 2 cut(s) 869, 1061
BmeT110I CYCGRG 1 cut(s) 1394
BmgBI CACGTC 1 cut(s) 334
BmgT120I GGNCC 1 cut(s) 1303
BmiI GGNNCC 4 cut(s) 147, 537, 699, 1057
BmrFI CCNGG 2 cut(s) 869, 1061
BmrI ACTGGG 3 cut(s) 57, 1133, 1152
BmsI GCATC 4 cut(s) 221, 792, 1501, 1680
BmuI ACTGGG 3 cut(s) 57, 1133, 1152
BpiI GAAGAC 4 cut(s) 656, 720, 1605, 1634
BplI GAGNNNNNCTC 3 cut(s) 33, 1168, 1200
BpmI CTGGAG 1 cut(s) 1170
BpuEI CTTGAG 3 cut(s) 394, 822, 1667
BsaHI GRCGYC 1 cut(s) 1608
BsaI GGTCTC 3 cut(s) 4, 1010, 1251
BsaJI CCNNGG 6 cut(s) 500, 683, 701, 1059, 1593, 1639
BsaXI ACNNNNNCTCC 2 cut(s) 721, 751
Bsc4I CCNNNNNNNGG 4 cut(s) 344, 345, 1311, 1426
Bse1I ACTGG 6 cut(s) 52, 539, 1139, 1158, 1228, 1672
BseBI CCWGG 2 cut(s) 869, 1061
BseDI CCNNGG 6 cut(s) 500, 683, 701, 1059, 1593, 1639
BseGI GGATG 6 cut(s) 263, 601, 711, 991, 1516, 1531
BseLI CCNNNNNNNGG 4 cut(s) 344, 345, 1311, 1426
BseMII CTCAG 5 cut(s) 146, 299, 1002, 1067, 1116
BseNI ACTGG 6 cut(s) 52, 539, 1139, 1158, 1228, 1672
BseRI GAGGAG 1 cut(s) 1028
BseSI GKGCMC 1 cut(s) 1060
BseXI GCAGC 7 cut(s) 128, 411, 571, 930, 1096, 1191, 1680
BseYI CCCAGC 1 cut(s) 1345
BsgI GTGCAG 2 cut(s) 472, 950
BshFI GGCC 3 cut(s) 682, 1304, 1644
BshNI GGYRCC 1 cut(s) 1055
BsiHKAI GWGCWC 3 cut(s) 8, 1020, 1554
BsiHKCI CYCGRG 1 cut(s) 1394
BslFI GGGAC 1 cut(s) 320
BslI CCNNNNNNNGG 4 cut(s) 344, 345, 1311, 1426
BsmAI GTCTC 4 cut(s) 4, 628, 1010, 1251
BsmBI CGTCTC 1 cut(s) 628
BsmFI GGGAC 1 cut(s) 320
BsmI GAATGC 3 cut(s) 211, 263, 407
BsnI GGCC 3 cut(s) 682, 1304, 1644
Bso31I GGTCTC 3 cut(s) 4, 1010, 1251
BsoBI CYCGRG 1 cut(s) 1394
Bsp1286I GDGCHC 4 cut(s) 8, 1020, 1060, 1554
Bsp143I GATC 7 cut(s) 145, 410, 535, 1082, 1168, 1338, 1738
Bsp19I CCATGG 2 cut(s) 701, 1593
BspACI CCGC 3 cut(s) 119, 210, 643
BspANI GGCC 3 cut(s) 682, 1304, 1644
BspCNI CTCAG 5 cut(s) 147, 300, 1003, 1068, 1117
BspHI TCATGA 1 cut(s) 469
BspLI GGNNCC 4 cut(s) 147, 537, 699, 1057
BspMI ACCTGC 1 cut(s) 444
BspPI GGATC 6 cut(s) 140, 153, 530, 543, 1090, 1346
BspT107I GGYRCC 1 cut(s) 1055
BspTNI GGTCTC 3 cut(s) 4, 1010, 1251
BsrI ACTGG 6 cut(s) 52, 539, 1139, 1158, 1228, 1672
BssECI CCNNGG 6 cut(s) 500, 683, 701, 1059, 1593, 1639
BssMI GATC 7 cut(s) 145, 410, 535, 1082, 1168, 1338, 1738
BssNI GRCGYC 1 cut(s) 1608
BssSI CACGAG 1 cut(s) 7
BssT1I CCWWGG 4 cut(s) 500, 701, 1593, 1639
Bst2BI CACGAG 1 cut(s) 7
Bst2UI CCWGG 2 cut(s) 869, 1061
Bst4CI ACNGT 4 cut(s) 368, 450, 548, 1252
Bst6I CTCTTC 4 cut(s) 127, 274, 971, 1328
BstACI GRCGYC 1 cut(s) 1608
BstAPI GCANNNNNTGC 1 cut(s) 1480
BstC8I GCNNGC 2 cut(s) 1476, 1485
BstDEI CTNAG 8 cut(s) 155, 308, 530, 746, 1011, 1076, 1125, 1359
BstDSI CCRYGG 3 cut(s) 683, 701, 1593
BstF5I GGATG 6 cut(s) 263, 601, 711, 991, 1516, 1531
BstHHI GCGC 3 cut(s) 354, 921, 1320
BstKTI GATC 7 cut(s) 148, 413, 538, 1085, 1171, 1341, 1741
BstMAI GTCTC 4 cut(s) 4, 628, 1010, 1251
BstMBI GATC 7 cut(s) 145, 410, 535, 1082, 1168, 1338, 1738
BstMWI GCNNNNNNNGC 5 cut(s) 1405, 1471, 1480, 1484, 1702
BstNI CCWGG 2 cut(s) 869, 1061
BstNSI RCATGY 1 cut(s) 1478
BstSCI CCNGG 2 cut(s) 867, 1059
BstSFI CTRYAG 1 cut(s) 831
BstSLI GKGCMC 1 cut(s) 1060
BstV1I GCAGC 7 cut(s) 128, 411, 571, 930, 1096, 1191, 1680
BstV2I GAAGAC 4 cut(s) 656, 720, 1605, 1634
BstX2I RGATCY 3 cut(s) 145, 535, 1338
BstYI RGATCY 3 cut(s) 145, 535, 1338
BsuI GTATCC 1 cut(s) 1737
BsuRI GGCC 3 cut(s) 682, 1304, 1644
BtgI CCRYGG 3 cut(s) 683, 701, 1593
BtrI CACGTC 1 cut(s) 334
BtsCI GGATG 6 cut(s) 263, 601, 711, 991, 1516, 1531
BtsI GCAGTG 1 cut(s) 1485
BtsIMutI CAGTG 6 cut(s) 207, 305, 364, 455, 1008, 1485
BveI ACCTGC 1 cut(s) 444
Cac8I GCNNGC 2 cut(s) 1476, 1485
CciI TCATGA 1 cut(s) 469
CfoI GCGC 3 cut(s) 354, 921, 1320
Cfr13I GGNCC 1 cut(s) 1303
CseI GACGC 1 cut(s) 1616
Csp6I GTAC 3 cut(s) 599, 1503, 1675
CviAII CATG 6 cut(s) 470, 484, 702, 812, 1475, 1594
CviQI GTAC 3 cut(s) 599, 1503, 1675
DdeI CTNAG 8 cut(s) 155, 308, 530, 746, 1011, 1076, 1125, 1359
DpnI GATC 7 cut(s) 147, 412, 537, 1084, 1170, 1340, 1740
DpnII GATC 7 cut(s) 145, 410, 535, 1082, 1168, 1338, 1738
DraIII CACNNNGTG 1 cut(s) 916
EaeI YGGCCR 1 cut(s) 680
Eam1104I CTCTTC 4 cut(s) 127, 274, 971, 1328
EarI CTCTTC 4 cut(s) 127, 274, 971, 1328
Eco130I CCWWGG 4 cut(s) 500, 701, 1593, 1639
Eco147I AGGCCT 1 cut(s) 1644
Eco31I GGTCTC 3 cut(s) 4, 1010, 1251
Eco32I GATATC 1 cut(s) 1453
Eco57I CTGAAG 4 cut(s) 498, 1157, 1358, 1404
Eco88I CYCGRG 1 cut(s) 1394
EcoRII CCWGG 2 cut(s) 867, 1059
EcoRV GATATC 1 cut(s) 1453
EcoT14I CCWWGG 4 cut(s) 500, 701, 1593, 1639
ErhI CCWWGG 4 cut(s) 500, 701, 1593, 1639
Esp3I CGTCTC 1 cut(s) 628
FaeI CATG 6 cut(s) 473, 487, 705, 815, 1478, 1597
FalI AAGNNNNNCTT 2 cut(s) 1439, 1471
FaqI GGGAC 1 cut(s) 320
FatI CATG 6 cut(s) 469, 483, 701, 811, 1474, 1593
Fnu4HI GCNGC 8 cut(s) 117, 210, 425, 585, 944, 1110, 1180, 1694
FokI GGATG 6 cut(s) 270, 588, 718, 998, 1523, 1538
Fsp4HI GCNGC 8 cut(s) 117, 210, 425, 585, 944, 1110, 1180, 1694
FspBI CTAG 3 cut(s) 438, 588, 1290
GlaI GCGC 3 cut(s) 353, 920, 1319
GluI GCNGC 8 cut(s) 117, 210, 425, 585, 944, 1110, 1180, 1694
GsaI CCCAGC 1 cut(s) 1349
GsuI CTGGAG 1 cut(s) 1170
HaeIII GGCC 3 cut(s) 682, 1304, 1644
HgaI GACGC 1 cut(s) 1616
HhaI GCGC 3 cut(s) 354, 921, 1320
Hin1I GRCGYC 1 cut(s) 1608
Hin1II CATG 6 cut(s) 473, 487, 705, 815, 1478, 1597
Hin6I GCGC 3 cut(s) 352, 919, 1318
HinP1I GCGC 3 cut(s) 352, 919, 1318
HincII GTYRAC 1 cut(s) 544
HindII GTYRAC 1 cut(s) 544
HindIII AAGCTT 3 cut(s) 743, 1269, 1485
HinfI GANTC 7 cut(s) 159, 186, 905, 1025, 1148, 1630, 1661
HphI GGTGA 3 cut(s) 818, 962, 1075
Hpy166II GTNNAC 3 cut(s) 544, 850, 1295
Hpy188III TCNNGA 8 cut(s) 55, 373, 398, 470, 839, 1187, 1394, 1583
Hpy8I GTNNAC 3 cut(s) 544, 850, 1295
HpyAV CCTTC 1 cut(s) 338
HpyCH4III ACNGT 4 cut(s) 368, 450, 548, 1252
HpyCH4IV ACGT 3 cut(s) 60, 333, 637
HpyF10VI GCNNNNNNNGC 5 cut(s) 1405, 1471, 1480, 1484, 1702
HpyF3I CTNAG 8 cut(s) 155, 308, 530, 746, 1011, 1076, 1125, 1359
HpySE526I ACGT 3 cut(s) 60, 333, 637
Hsp92I GRCGYC 1 cut(s) 1608
Hsp92II CATG 6 cut(s) 473, 487, 705, 815, 1478, 1597
HspAI GCGC 3 cut(s) 352, 919, 1318
Kzo9I GATC 7 cut(s) 145, 410, 535, 1082, 1168, 1338, 1738
LmnI GCTCC 4 cut(s) 1015, 1229, 1429, 1549
Lsp1109I GCAGC 7 cut(s) 128, 411, 571, 930, 1096, 1191, 1680
LweI GCATC 4 cut(s) 221, 792, 1501, 1680
MaeI CTAG 3 cut(s) 438, 588, 1290
MaeII ACGT 3 cut(s) 60, 333, 637
MaeIII GTNAC 2 cut(s) 463, 520
MalI GATC 7 cut(s) 147, 412, 537, 1084, 1170, 1340, 1740
MboI GATC 7 cut(s) 145, 410, 535, 1082, 1168, 1338, 1738
MflI RGATCY 3 cut(s) 145, 535, 1338
MhlI GDGCHC 4 cut(s) 8, 1020, 1060, 1554
MluCI AATT 8 cut(s) 79, 88, 566, 795, 1087, 1409, 1666, 1713
MlyI GAGTC 1 cut(s) 1624
MmeI TCCRAC 2 cut(s) 103, 963
MroXI GAANNNNTTC 3 cut(s) 62, 957, 1389
MseI TTAA 7 cut(s) 219, 276, 288, 1104, 1413, 1536, 1575
MslI CAYNNNNRTG 3 cut(s) 855, 1473, 1688
MspA1I CMGCKG 2 cut(s) 119, 1075
MspR9I CCNGG 2 cut(s) 869, 1061
Mva1269I GAATGC 3 cut(s) 211, 263, 407
MvaI CCWGG 2 cut(s) 869, 1061
MwoI GCNNNNNNNGC 5 cut(s) 1405, 1471, 1480, 1484, 1702
NcoI CCATGG 2 cut(s) 701, 1593
NdeII GATC 7 cut(s) 145, 410, 535, 1082, 1168, 1338, 1738
NlaIII CATG 6 cut(s) 473, 487, 705, 815, 1478, 1597
NlaIV GGNNCC 4 cut(s) 147, 537, 699, 1057
NmuCI GTSAC 1 cut(s) 520
NspI RCATGY 1 cut(s) 1478
OliI CACNNNNGTG 1 cut(s) 855
PaeI GCATGC 1 cut(s) 1478
PaeR7I CTCGAG 1 cut(s) 1394
PagI TCATGA 1 cut(s) 469
PceI AGGCCT 1 cut(s) 1644
PcsI WCGNNNNNNNCGW 1 cut(s) 1614
PctI GAATGC 3 cut(s) 211, 263, 407
PdmI GAANNNNTTC 3 cut(s) 62, 957, 1389
PfeI GAWTC 6 cut(s) 159, 186, 905, 1025, 1148, 1661
PkrI GCNGC 8 cut(s) 118, 211, 426, 586, 945, 1111, 1181, 1695
PleI GAGTC 1 cut(s) 1624
PpsI GAGTC 1 cut(s) 1624
PshBI ATTAAT 2 cut(s) 1104, 1536
PsiI TTATAA 1 cut(s) 1437
Psp1406I AACGTT 1 cut(s) 60
Psp6I CCWGG 2 cut(s) 867, 1059
PspFI CCCAGC 1 cut(s) 1345
PspGI CCWGG 2 cut(s) 867, 1059
PspN4I GGNNCC 4 cut(s) 147, 537, 699, 1057
PspPI GGNCC 1 cut(s) 1303
PsuI RGATCY 3 cut(s) 145, 535, 1338
PvuII CAGCTG 1 cut(s) 1075
RsaI GTAC 3 cut(s) 600, 1504, 1676
RsaNI GTAC 3 cut(s) 599, 1503, 1675
RseI CAYNNNNRTG 3 cut(s) 855, 1473, 1688
SaqAI TTAA 7 cut(s) 219, 276, 288, 1104, 1413, 1536, 1575
SatI GCNGC 8 cut(s) 117, 210, 425, 585, 944, 1110, 1180, 1694
Sau3AI GATC 7 cut(s) 145, 410, 535, 1082, 1168, 1338, 1738
Sau96I GGNCC 1 cut(s) 1303
ScaI AGTACT 1 cut(s) 1504
SchI GAGTC 1 cut(s) 1624
ScrFI CCNGG 2 cut(s) 869, 1061
SduI GDGCHC 4 cut(s) 8, 1020, 1060, 1554
SfaNI GCATC 4 cut(s) 221, 792, 1501, 1680
SfcI CTRYAG 1 cut(s) 831
Sfr274I CTCGAG 1 cut(s) 1394
SlaI CTCGAG 1 cut(s) 1394
SmiMI CAYNNNNRTG 3 cut(s) 855, 1473, 1688
SmlI CTYRAG 4 cut(s) 373, 837, 1394, 1646
SmoI CTYRAG 4 cut(s) 373, 837, 1394, 1646
SphI GCATGC 1 cut(s) 1478
Sse9I AATT 8 cut(s) 79, 88, 566, 795, 1087, 1409, 1666, 1713
SseBI AGGCCT 1 cut(s) 1644
SsiI CCGC 3 cut(s) 119, 210, 643
SspI AATATT 1 cut(s) 692
SspMI CTAG 3 cut(s) 438, 588, 1290
StuI AGGCCT 1 cut(s) 1644
StyD4I CCNGG 2 cut(s) 867, 1059
StyI CCWWGG 4 cut(s) 500, 701, 1593, 1639
TaaI ACNGT 4 cut(s) 368, 450, 548, 1252
TaiI ACGT 3 cut(s) 63, 336, 640
TaqI TCGA 6 cut(s) 23, 409, 491, 739, 1395, 1688
TasI AATT 8 cut(s) 79, 88, 566, 795, 1087, 1409, 1666, 1713
TatI WGTACW 1 cut(s) 1502
TauI GCSGC 1 cut(s) 212
TfiI GAWTC 6 cut(s) 159, 186, 905, 1025, 1148, 1661
Tru1I TTAA 7 cut(s) 219, 276, 288, 1104, 1413, 1536, 1575
Tru9I TTAA 7 cut(s) 219, 276, 288, 1104, 1413, 1536, 1575
TscAI CASTG 6 cut(s) 207, 312, 371, 455, 1015, 1485
TseFI GTSAC 1 cut(s) 520
TseI GCWGC 7 cut(s) 116, 424, 584, 943, 1109, 1179, 1693
Tsp45I GTSAC 1 cut(s) 520
TspDTI ATGAA 5 cut(s) 579, 828, 1203, 1290, 1674
TspRI CASTG 6 cut(s) 207, 312, 371, 455, 1015, 1485
VspI ATTAAT 2 cut(s) 1104, 1536
XapI RAATTY 4 cut(s) 79, 566, 1087, 1666
XceI RCATGY 1 cut(s) 1478
XhoI CTCGAG 1 cut(s) 1394
XmnI GAANNNNTTC 3 cut(s) 62, 957, 1389
XspI CTAG 3 cut(s) 438, 588, 1290
ZrmI AGTACT 1 cut(s) 1504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.