F-box kelch-repeat protein At3g06240-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FBA_3 | PF08268 | 3 - 139 | 5.8e-07 | F-box associated beta propeller domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 249 |
| AccII | CGCG | 1 cut(s) | 414 |
| AciI | CCGC | 2 cut(s) | 122, 352 |
| AcoI | YGGCCR | 1 cut(s) | 240 |
| AcsI | RAATTY | 1 cut(s) | 408 |
| AcuI | CTGAAG | 1 cut(s) | 303 |
| AfaI | GTAC | 1 cut(s) | 365 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 249 |
| AgsI | TTSAA | 1 cut(s) | 143 |
| AjnI | CCWGG | 2 cut(s) | 248, 438 |
| AluBI | AGCT | 1 cut(s) | 384 |
| AluI | AGCT | 1 cut(s) | 384 |
| Alw26I | GTCTC | 1 cut(s) | 4 |
| AoxI | GGCC | 1 cut(s) | 240 |
| ApeKI | GCWGC | 2 cut(s) | 328, 331 |
| ApoI | RAATTY | 1 cut(s) | 408 |
| AsuHPI | GGTGA | 3 cut(s) | 82, 158, 447 |
| BalI | TGGCCA | 1 cut(s) | 242 |
| BbsI | GAAGAC | 1 cut(s) | 163 |
| BbvI | GCAGC | 2 cut(s) | 315, 318 |
| BciT130I | CCWGG | 2 cut(s) | 250, 440 |
| BcoDI | GTCTC | 1 cut(s) | 4 |
| BfaI | CTAG | 1 cut(s) | 209 |
| BfmI | CTRYAG | 1 cut(s) | 466 |
| BisI | GCNGC | 3 cut(s) | 122, 329, 332 |
| BlsI | GCNGC | 3 cut(s) | 123, 330, 333 |
| Bme1390I | CCNGG | 2 cut(s) | 250, 440 |
| BmrFI | CCNGG | 2 cut(s) | 250, 440 |
| BmsI | GCATC | 1 cut(s) | 273 |
| BpiI | GAAGAC | 1 cut(s) | 163 |
| BpmI | CTGGAG | 1 cut(s) | 461 |
| BsaWI | WCCGGW | 1 cut(s) | 296 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 249 |
| BseBI | CCWGG | 2 cut(s) | 250, 440 |
| BseGI | GGATG | 3 cut(s) | 10, 106, 208 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 249 |
| BseMII | CTCAG | 1 cut(s) | 178 |
| BseRI | GAGGAG | 2 cut(s) | 39, 110 |
| BseXI | GCAGC | 2 cut(s) | 315, 318 |
| BseYI | CCCAGC | 1 cut(s) | 428 |
| Bsh1236I | CGCG | 1 cut(s) | 414 |
| BshFI | GGCC | 1 cut(s) | 242 |
| BsiSI | CCGG | 1 cut(s) | 297 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 249 |
| BsmAI | GTCTC | 1 cut(s) | 4 |
| BsmI | GAATGC | 1 cut(s) | 185 |
| BsnI | GGCC | 1 cut(s) | 242 |
| Bsp1407I | TGTACA | 1 cut(s) | 363 |
| Bsp143I | GATC | 4 cut(s) | 59, 72, 205, 337 |
| Bsp68I | TCGCGA | 1 cut(s) | 414 |
| BspACI | CCGC | 2 cut(s) | 122, 352 |
| BspANI | GGCC | 1 cut(s) | 242 |
| BspCNI | CTCAG | 1 cut(s) | 177 |
| BspFNI | CGCG | 1 cut(s) | 414 |
| BspHI | TCATGA | 1 cut(s) | 222 |
| BsrGI | TGTACA | 1 cut(s) | 363 |
| BssMI | GATC | 4 cut(s) | 59, 72, 205, 337 |
| Bst2UI | CCWGG | 2 cut(s) | 250, 440 |
| BstAUI | TGTACA | 1 cut(s) | 363 |
| BstDEI | CTNAG | 1 cut(s) | 164 |
| BstF5I | GGATG | 3 cut(s) | 10, 106, 208 |
| BstFNI | CGCG | 1 cut(s) | 414 |
| BstKTI | GATC | 4 cut(s) | 62, 75, 208, 340 |
| BstMAI | GTCTC | 1 cut(s) | 4 |
| BstMBI | GATC | 4 cut(s) | 59, 72, 205, 337 |
| BstNI | CCWGG | 2 cut(s) | 250, 440 |
| BstSCI | CCNGG | 2 cut(s) | 248, 438 |
| BstSFI | CTRYAG | 1 cut(s) | 466 |
| BstUI | CGCG | 1 cut(s) | 414 |
| BstV1I | GCAGC | 2 cut(s) | 315, 318 |
| BstV2I | GAAGAC | 1 cut(s) | 163 |
| BsuRI | GGCC | 1 cut(s) | 242 |
| BtsCI | GGATG | 3 cut(s) | 10, 106, 208 |
| BtuMI | TCGCGA | 1 cut(s) | 414 |
| CciI | TCATGA | 1 cut(s) | 222 |
| CseI | GACGC | 1 cut(s) | 157 |
| Csp6I | GTAC | 1 cut(s) | 364 |
| CviAII | CATG | 2 cut(s) | 53, 223 |
| CviJI | RGCY | 3 cut(s) | 242, 384, 447 |
| CviKI_1 | RGCY | 3 cut(s) | 242, 384, 447 |
| CviQI | GTAC | 1 cut(s) | 364 |
| DdeI | CTNAG | 1 cut(s) | 164 |
| DpnI | GATC | 4 cut(s) | 61, 74, 207, 339 |
| DpnII | GATC | 4 cut(s) | 59, 72, 205, 337 |
| EaeI | YGGCCR | 1 cut(s) | 240 |
| Eco57I | CTGAAG | 1 cut(s) | 303 |
| EcoRI | GAATTC | 1 cut(s) | 408 |
| EcoRII | CCWGG | 2 cut(s) | 248, 438 |
| FaeI | CATG | 2 cut(s) | 56, 226 |
| FaiI | YATR | 6 cut(s) | 54, 68, 187, 224, 362, 468 |
| FatI | CATG | 2 cut(s) | 52, 222 |
| Fnu4HI | GCNGC | 3 cut(s) | 122, 329, 332 |
| FokI | GGATG | 3 cut(s) | 17, 113, 215 |
| Fsp4HI | GCNGC | 3 cut(s) | 122, 329, 332 |
| FspBI | CTAG | 1 cut(s) | 209 |
| GluI | GCNGC | 3 cut(s) | 122, 329, 332 |
| GsaI | CCCAGC | 1 cut(s) | 432 |
| GsuI | CTGGAG | 1 cut(s) | 461 |
| HaeIII | GGCC | 1 cut(s) | 242 |
| HapII | CCGG | 1 cut(s) | 297 |
| HgaI | GACGC | 1 cut(s) | 157 |
| Hin1II | CATG | 2 cut(s) | 56, 226 |
| HindIII | AAGCTT | 1 cut(s) | 382 |
| HinfI | GANTC | 2 cut(s) | 48, 112 |
| HpaII | CCGG | 1 cut(s) | 297 |
| HphI | GGTGA | 3 cut(s) | 82, 158, 447 |
| Hpy188I | TCNGA | 1 cut(s) | 283 |
| Hpy188III | TCNNGA | 4 cut(s) | 107, 209, 223, 413 |
| HpyAV | CCTTC | 2 cut(s) | 137, 278 |
| HpyCH4V | TGCA | 2 cut(s) | 334, 346 |
| HpyF3I | CTNAG | 1 cut(s) | 164 |
| Hsp92II | CATG | 2 cut(s) | 56, 226 |
| Kzo9I | GATC | 4 cut(s) | 59, 72, 205, 337 |
| LpnPI | CCDG | 7 cut(s) | 138, 235, 262, 310, 414, 425, 452 |
| Lsp1109I | GCAGC | 2 cut(s) | 315, 318 |
| LweI | GCATC | 1 cut(s) | 273 |
| MaeI | CTAG | 1 cut(s) | 209 |
| MaeIII | GTNAC | 2 cut(s) | 288, 453 |
| MalI | GATC | 4 cut(s) | 61, 74, 207, 339 |
| MboI | GATC | 4 cut(s) | 59, 72, 205, 337 |
| MboII | GAAGA | 3 cut(s) | 161, 163, 319 |
| MlsI | TGGCCA | 1 cut(s) | 242 |
| MluCI | AATT | 2 cut(s) | 399, 408 |
| MluNI | TGGCCA | 1 cut(s) | 242 |
| MlyI | GAGTC | 1 cut(s) | 57 |
| MnlI | CCTC | 5 cut(s) | 17, 88, 91, 126, 169 |
| Mox20I | TGGCCA | 1 cut(s) | 242 |
| MscI | TGGCCA | 1 cut(s) | 242 |
| MseI | TTAA | 1 cut(s) | 132 |
| Msp20I | TGGCCA | 1 cut(s) | 242 |
| MspA1I | CMGCKG | 1 cut(s) | 352 |
| MspI | CCGG | 1 cut(s) | 297 |
| MspR9I | CCNGG | 2 cut(s) | 250, 440 |
| Mva1269I | GAATGC | 1 cut(s) | 185 |
| MvaI | CCWGG | 2 cut(s) | 250, 440 |
| MvnI | CGCG | 1 cut(s) | 414 |
| NdeII | GATC | 4 cut(s) | 59, 72, 205, 337 |
| NlaIII | CATG | 2 cut(s) | 56, 226 |
| NmuCI | GTSAC | 1 cut(s) | 453 |
| NruI | TCGCGA | 1 cut(s) | 414 |
| PagI | TCATGA | 1 cut(s) | 222 |
| PctI | GAATGC | 1 cut(s) | 185 |
| PfeI | GAWTC | 1 cut(s) | 112 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 249 |
| PfoI | TCCNGGA | 1 cut(s) | 248 |
| PkrI | GCNGC | 3 cut(s) | 123, 330, 333 |
| PleI | GAGTC | 1 cut(s) | 56 |
| PpsI | GAGTC | 1 cut(s) | 56 |
| Psp6I | CCWGG | 2 cut(s) | 248, 438 |
| PspFI | CCCAGC | 1 cut(s) | 428 |
| PspGI | CCWGG | 2 cut(s) | 248, 438 |
| RruI | TCGCGA | 1 cut(s) | 414 |
| RsaI | GTAC | 1 cut(s) | 365 |
| RsaNI | GTAC | 1 cut(s) | 364 |
| SaqAI | TTAA | 1 cut(s) | 132 |
| SatI | GCNGC | 3 cut(s) | 122, 329, 332 |
| Sau3AI | GATC | 4 cut(s) | 59, 72, 205, 337 |
| SchI | GAGTC | 1 cut(s) | 57 |
| ScrFI | CCNGG | 2 cut(s) | 250, 440 |
| SetI | ASST | 4 cut(s) | 148, 386, 421, 441 |
| SfaNI | GCATC | 1 cut(s) | 273 |
| SfcI | CTRYAG | 1 cut(s) | 466 |
| Sse9I | AATT | 2 cut(s) | 399, 408 |
| SsiI | CCGC | 2 cut(s) | 122, 352 |
| SspI | AATATT | 2 cut(s) | 136, 158 |
| SspMI | CTAG | 1 cut(s) | 209 |
| StyD4I | CCNGG | 2 cut(s) | 248, 438 |
| TaqI | TCGA | 1 cut(s) | 174 |
| TasI | AATT | 2 cut(s) | 399, 408 |
| TatI | WGTACW | 1 cut(s) | 363 |
| TauI | GCSGC | 1 cut(s) | 124 |
| TfiI | GAWTC | 1 cut(s) | 112 |
| Tru1I | TTAA | 1 cut(s) | 132 |
| Tru9I | TTAA | 1 cut(s) | 132 |
| TseFI | GTSAC | 1 cut(s) | 453 |
| TseI | GCWGC | 2 cut(s) | 328, 331 |
| Tsp45I | GTSAC | 1 cut(s) | 453 |
| TspDTI | ATGAA | 4 cut(s) | 20, 32, 168, 239 |
| TspGWI | ACGGA | 1 cut(s) | 249 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 249 |
| XapI | RAATTY | 1 cut(s) | 408 |
| XbaI | TCTAGA | 1 cut(s) | 208 |
| XspI | CTAG | 1 cut(s) | 209 |