Rorug07G0265900

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000111
Physical Location & Seq
Forward (+)
25117531 .. 25119781
2251 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0265900.1

Sequence Viewer

Length: 1479 bp
ATGGCAAATGAGATATGGATCGTTCCCTTTTTTGGTCAGGGCCATCTCTTCCCTTCAATGGAGCTCTGCAAGCACTTGGCCTCCAGAAACTTCAAAGCCGTTATGGTTATCTCTTCCAAAGTCTCCTCCTCCATACCCTCATCTCTCCGCCAATACCCACTCGTTGAAATCGCTGAGGTTTCTGAAACCCCACCATCTGATTCTTCTCCTCCGCCGCAGGAGCCGAGTTCTCAGCCACTTCACCGCCACCACGCACACCACAGCCAGATAGCAGTCGGGCTTGAGAAACTCCTCCATGATCCGGATTCAGTCCGACCCCTTTATGCGGTTGTTGACATGAAGATGAGCTGGACTTTCGAGATTTTCAACAGATATGAAATTCCGGCAGTCAGCTTCTTCACCTCCGGTGCTTGCTCCGCCGCCATGGAGTATGCCATGTGGAAGGCCCAACCTTTAGATATCAAAGCCGGTGAGACTCGCTTACTACCCGGGTTACCCCAAGAAATGGCTATTACGGTTTCAGATCTCAAGCGACAGAGATTTCCTCCTGAACCACCTCGAAAAAAGTTTGGGGCGGAGAGACATCACCCAACCAATCCCGGTGATAAACCACCGTGGCTAGAAGAAATCGAGCCGTGTATGGGAGTCTTGATCAACACGTGCAACGATCTGGAGTATCCATTCATCGAGTACGTCTCCAATAACATCGGAAAACCAGTTTGGGGCGTGGGCCCGCTCTTGCCCGAACAATATTGGAAATCGGCCGGTTCGGTTTTCCACGACCACAAAATTCGAACCAATCGGAAATCAAATGTCACCGAAGAAGATGTAAATGTGTGGTTAGATACGAAACCACATGGATCGGTGTTGTACATTTCATTTGGAACTGTGGGGGGTCCCGCTAAGGAGGAGTACGAGATACTAGCCAAGGCGTTGGAAGCGTCAACCCGGCCATTCATATGGGTGGTCCAAACCAATGCAGGCCTCTCGCGGGGTCCTCCCGGTCCTCCACAGTCCGGTTCTGACCCTGAAGAAGCCTATTTTCCGCACGAGCTGAATGTTCGTGTCGGAAAAAGAGGCTTGATCATACACGGGTGGGCGCCACAGCTCTTGATTCTAAGTCATCCATCAACAGGAGGATTCTTGTCGCACTGTGGGTGGAATTCAACTGTGGAGGCAATTGGGCGTGGAGTTCCATTCTTGGCGTGGCCAATTAGAGGGGATCAATACTCGGACGCTAAATTGGTAACGAGCTATCTCAAAGTTGGGTATCTGATTTCTGAGGATTTCTCACAGAAAATAAAGGAGGAGGATATAACGAGAGGAATTGAGAAGCTACTGAGTGATGAAGACATGAAGCAACGAGCTGTGAAGCTAAGTGCTAAGTTTAAGCATGGTTTTCCAGCAAGTTCTGTGGCTGCTTTAGATGCTTTTGGAGACTTCATTAGACAGAAAGGCAAAGCAACTTCAGCTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

492

Amino Acids

54.7

Weight (kDa)

6.56

Isoelectric Point (pI)

47.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 287 - 461 3.5e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1099
AccB7I CCANNNNNTGG 1 cut(s) 505
AccBSI CCGCTC 1 cut(s) 736
AccII CGCG 1 cut(s) 991
AccIII TCCGGA 1 cut(s) 301
AclWI GGATC 4 cut(s) 26, 293, 868, 1230
AcoI YGGCCR 3 cut(s) 762, 950, 1208
AcsI RAATTY 3 cut(s) 378, 789, 1162
AcuI CTGAAG 2 cut(s) 1050, 1452
AcvI CACGTG 1 cut(s) 660
AcyI GRCGYC 1 cut(s) 1100
AfaI GTAC 3 cut(s) 692, 872, 914
AflIII ACRYGT 1 cut(s) 657
AgsI TTSAA 5 cut(s) 57, 94, 167, 367, 1167
AjuI GAANNNNNNNTTGG 2 cut(s) 703, 735
Alw21I GWGCWC 1 cut(s) 66
Alw26I GTCTC 5 cut(s) 127, 467, 574, 700, 1431
AlwI GGATC 4 cut(s) 26, 293, 868, 1230
Ama87I CYCGRG 1 cut(s) 488
Aor13HI TCCGGA 1 cut(s) 301
AoxI GGCC 8 cut(s) 40, 78, 444, 730, 762, 950, 982, 1208
ApaI GGGCCC 1 cut(s) 734
ApeKI GCWGC 1 cut(s) 1418
ApoI RAATTY 3 cut(s) 378, 789, 1162
AspLEI GCGC 1 cut(s) 1102
AspS9I GGNCC 8 cut(s) 40, 445, 730, 731, 896, 967, 995, 1004
AsuC2I CCSGG 5 cut(s) 489, 490, 600, 949, 1002
AsuHPI GGTGA 6 cut(s) 233, 391, 482, 578, 614, 808
AsuII TTCGAA 1 cut(s) 793
AvaI CYCGRG 1 cut(s) 488
AvaII GGWCC 4 cut(s) 896, 967, 995, 1004
BaeGI GKGCMC 1 cut(s) 734
BalI TGGCCA 1 cut(s) 1210
BanI GGYRCC 1 cut(s) 1099
BanII GRGCYC 2 cut(s) 66, 734
BauI CACGAG 1 cut(s) 1049
BbrPI CACGTG 1 cut(s) 660
BbsI GAAGAC 1 cut(s) 1356
Bbv12I GWGCWC 1 cut(s) 66
BbvCI CCTCAGC 1 cut(s) 174
BbvI GCAGC 1 cut(s) 1405
BccI CCATC 3 cut(s) 51, 202, 1135
BceAI ACGGC 2 cut(s) 83, 619
BcgI CGANNNNNNTGC 2 cut(s) 969, 1003
BciVI GTATCC 1 cut(s) 687
BclI TGATCA 2 cut(s) 651, 1083
BcnI CCSGG 5 cut(s) 489, 490, 600, 949, 1002
BcoDI GTCTC 5 cut(s) 127, 467, 574, 700, 1431
BfaI CTAG 2 cut(s) 620, 923
BfoI RGCGCY 1 cut(s) 1103
BfuI GTATCC 1 cut(s) 687
BglII AGATCT 1 cut(s) 523
BisI GCNGC 3 cut(s) 215, 420, 1419
BlsI GCNGC 3 cut(s) 216, 421, 1420
Bme1390I CCNGG 5 cut(s) 489, 490, 600, 949, 1002
Bme18I GGWCC 4 cut(s) 896, 967, 995, 1004
BmeT110I CYCGRG 1 cut(s) 488
BmgT120I GGNCC 8 cut(s) 40, 445, 730, 731, 896, 967, 995, 1004
BmiI GGNNCC 6 cut(s) 222, 732, 897, 898, 996, 1101
BmrFI CCNGG 5 cut(s) 489, 490, 600, 949, 1002
BmsI GCATC 1 cut(s) 1417
BpiI GAAGAC 1 cut(s) 1356
BplI GAGNNNNNCTC 6 cut(s) 529, 561, 680, 712, 1274, 1306
BpmI CTGGAG 2 cut(s) 67, 692
Bpu10I CCTNAGC 2 cut(s) 174, 903
Bpu14I TTCGAA 1 cut(s) 793
BpuEI CTTGAG 2 cut(s) 302, 512
BpuMI CCSGG 5 cut(s) 489, 490, 600, 949, 1002
BsaAI YACGTR 1 cut(s) 660
BsaBI GATNNNNATC 1 cut(s) 17
BsaHI GRCGYC 1 cut(s) 1100
BsaJI CCNNGG 4 cut(s) 423, 488, 614, 927
BsaWI WCCGGW 3 cut(s) 301, 404, 1016
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bse118I RCCGGY 2 cut(s) 467, 764
Bse1I ACTGG 1 cut(s) 716
Bse8I GATNNNNATC 1 cut(s) 17
BseAI TCCGGA 1 cut(s) 301
BseDI CCNNGG 4 cut(s) 423, 488, 614, 927
BseGI GGATG 1 cut(s) 1123
BseJI GATNNNNATC 1 cut(s) 17
BseMII CTCAG 4 cut(s) 165, 245, 1272, 1331
BseNI ACTGG 1 cut(s) 716
BseRI GAGGAG 6 cut(s) 115, 118, 198, 281, 923, 1322
BseSI GKGCMC 1 cut(s) 734
BseX3I CGGCCG 1 cut(s) 762
BseXI GCAGC 1 cut(s) 1405
Bsh1236I CGCG 1 cut(s) 991
Bsh1285I CGRYCG 1 cut(s) 765
BshFI GGCC 8 cut(s) 42, 80, 446, 732, 764, 952, 984, 1210
BshNI GGYRCC 1 cut(s) 1099
BsiEI CGRYCG 1 cut(s) 765
BsiHKAI GWGCWC 1 cut(s) 66
BsiHKCI CYCGRG 1 cut(s) 488
BslFI GGGAC 1 cut(s) 882
BsmAI GTCTC 5 cut(s) 127, 467, 574, 700, 1431
BsmBI CGTCTC 1 cut(s) 700
BsmFI GGGAC 1 cut(s) 882
BsnI GGCC 8 cut(s) 42, 80, 446, 732, 764, 952, 984, 1210
BsoBI CYCGRG 1 cut(s) 488
Bsp119I TTCGAA 1 cut(s) 793
Bsp120I GGGCCC 1 cut(s) 730
Bsp1286I GDGCHC 2 cut(s) 66, 734
Bsp13I TCCGGA 1 cut(s) 301
Bsp1407I TGTACA 1 cut(s) 870
Bsp143I GATC 8 cut(s) 18, 298, 523, 651, 667, 860, 1083, 1222
Bsp19I CCATGG 1 cut(s) 423
BspANI GGCC 8 cut(s) 42, 80, 446, 732, 764, 952, 984, 1210
BspCNI CTCAG 4 cut(s) 166, 244, 1273, 1332
BspEI TCCGGA 1 cut(s) 301
BspFNI CGCG 1 cut(s) 991
BspLI GGNNCC 6 cut(s) 222, 732, 897, 898, 996, 1101
BspPI GGATC 4 cut(s) 26, 293, 868, 1230
BspT104I TTCGAA 1 cut(s) 793
BspT107I GGYRCC 1 cut(s) 1099
BsrBI CCGCTC 1 cut(s) 736
BsrFI RCCGGY 2 cut(s) 467, 764
BsrGI TGTACA 1 cut(s) 870
BsrI ACTGG 1 cut(s) 716
BssAI RCCGGY 2 cut(s) 467, 764
BssECI CCNNGG 4 cut(s) 423, 488, 614, 927
BssMI GATC 8 cut(s) 18, 298, 523, 651, 667, 860, 1083, 1222
BssNI GRCGYC 1 cut(s) 1100
BssSI CACGAG 1 cut(s) 1049
BssT1I CCWWGG 2 cut(s) 423, 927
Bst2BI CACGAG 1 cut(s) 1049
Bst4CI ACNGT 6 cut(s) 517, 615, 889, 1014, 1154, 1171
Bst6I CTCTTC 2 cut(s) 53, 118
BstACI GRCGYC 1 cut(s) 1100
BstAUI TGTACA 1 cut(s) 870
BstBAI YACGTR 1 cut(s) 660
BstBI TTCGAA 1 cut(s) 793
BstC8I GCNNGC 4 cut(s) 71, 412, 734, 982
BstDEI CTNAG 8 cut(s) 174, 231, 903, 1118, 1281, 1340, 1376, 1383
BstDSI CCRYGG 2 cut(s) 423, 614
BstEII GGTNACC 1 cut(s) 492
BstF5I GGATG 1 cut(s) 1123
BstFNI CGCG 1 cut(s) 991
BstH2I RGCGCY 1 cut(s) 1103
BstHHI GCGC 1 cut(s) 1102
BstKTI GATC 8 cut(s) 21, 301, 526, 654, 670, 863, 1086, 1225
BstMAI GTCTC 5 cut(s) 127, 467, 574, 700, 1431
BstMBI GATC 8 cut(s) 18, 298, 523, 651, 667, 860, 1083, 1222
BstMCI CGRYCG 1 cut(s) 765
BstMWI GCNNNNNNNGC 6 cut(s) 70, 220, 416, 938, 1427, 1469
BstPI GGTNACC 1 cut(s) 492
BstSCI CCNGG 5 cut(s) 487, 488, 598, 947, 1000
BstSLI GKGCMC 1 cut(s) 734
BstUI CGCG 1 cut(s) 991
BstV1I GCAGC 1 cut(s) 1405
BstV2I GAAGAC 1 cut(s) 1356
BstX2I RGATCY 1 cut(s) 523
BstXI CCANNNNNNTGG 2 cut(s) 934, 960
BstYI RGATCY 1 cut(s) 523
BstZI CGGCCG 1 cut(s) 762
BsuI GTATCC 1 cut(s) 687
BsuRI GGCC 8 cut(s) 42, 80, 446, 732, 764, 952, 984, 1210
BtgI CCRYGG 2 cut(s) 423, 614
BtsCI GGATG 1 cut(s) 1123
BtsIMutI CAGTG 1 cut(s) 1150
Cac8I GCNNGC 4 cut(s) 71, 412, 734, 982
CfoI GCGC 1 cut(s) 1102
Cfr10I RCCGGY 2 cut(s) 467, 764
Cfr13I GGNCC 8 cut(s) 40, 445, 730, 731, 896, 967, 995, 1004
Cfr9I CCCGGG 1 cut(s) 488
CseI GACGC 2 cut(s) 930, 1244
Csp6I GTAC 3 cut(s) 691, 871, 913
CspCI CAANNNNNGTGG 4 cut(s) 1092, 1127, 1395, 1430
CviAII CATG 7 cut(s) 296, 337, 424, 436, 857, 1354, 1394
CviQI GTAC 3 cut(s) 691, 871, 913
DdeI CTNAG 8 cut(s) 174, 231, 903, 1118, 1281, 1340, 1376, 1383
DinI GGCGCC 1 cut(s) 1101
DpnI GATC 8 cut(s) 20, 300, 525, 653, 669, 862, 1085, 1224
DpnII GATC 8 cut(s) 18, 298, 523, 651, 667, 860, 1083, 1222
EaeI YGGCCR 3 cut(s) 762, 950, 1208
EagI CGGCCG 1 cut(s) 762
Eam1104I CTCTTC 2 cut(s) 53, 118
EarI CTCTTC 2 cut(s) 53, 118
EciI GGCGGA 4 cut(s) 137, 201, 406, 590
Ecl136II GAGCTC 1 cut(s) 64
EclXI CGGCCG 1 cut(s) 762
Eco130I CCWWGG 2 cut(s) 423, 927
Eco147I AGGCCT 1 cut(s) 984
Eco24I GRGCYC 2 cut(s) 66, 734
Eco32I GATATC 1 cut(s) 460
Eco47I GGWCC 4 cut(s) 896, 967, 995, 1004
Eco52I CGGCCG 1 cut(s) 762
Eco53kI GAGCTC 1 cut(s) 64
Eco57I CTGAAG 2 cut(s) 1050, 1452
Eco72I CACGTG 1 cut(s) 660
Eco88I CYCGRG 1 cut(s) 488
Eco91I GGTNACC 1 cut(s) 492
EcoICRI GAGCTC 1 cut(s) 64
EcoO109I RGGNCCY 2 cut(s) 896, 995
EcoO65I GGTNACC 1 cut(s) 492
EcoRI GAATTC 1 cut(s) 1162
EcoRV GATATC 1 cut(s) 460
EcoT14I CCWWGG 2 cut(s) 423, 927
EcoT38I GRGCYC 2 cut(s) 66, 734
EgeI GGCGCC 1 cut(s) 1101
EheI GGCGCC 1 cut(s) 1101
ErhI CCWWGG 2 cut(s) 423, 927
Esp3I CGTCTC 1 cut(s) 700
FaeI CATG 7 cut(s) 299, 340, 427, 439, 860, 1357, 1397
FaqI GGGAC 1 cut(s) 882
FatI CATG 7 cut(s) 295, 336, 423, 435, 856, 1353, 1393
FauI CCCGC 3 cut(s) 741, 907, 984
FauNDI CATATG 1 cut(s) 959
FbaI TGATCA 2 cut(s) 651, 1083
Fnu4HI GCNGC 3 cut(s) 215, 420, 1419
FokI GGATG 1 cut(s) 1110
FriOI GRGCYC 2 cut(s) 66, 734
Fsp4HI GCNGC 3 cut(s) 215, 420, 1419
FspBI CTAG 2 cut(s) 620, 923
GlaI GCGC 1 cut(s) 1101
GluI GCNGC 3 cut(s) 215, 420, 1419
GsuI CTGGAG 2 cut(s) 67, 692
HaeII RGCGCY 1 cut(s) 1103
HaeIII GGCC 8 cut(s) 42, 80, 446, 732, 764, 952, 984, 1210
HgaI GACGC 2 cut(s) 930, 1244
HhaI GCGC 1 cut(s) 1102
Hin1I GRCGYC 1 cut(s) 1100
Hin1II CATG 7 cut(s) 299, 340, 427, 439, 860, 1357, 1397
Hin6I GCGC 1 cut(s) 1100
HinP1I GCGC 1 cut(s) 1100
HincII GTYRAC 2 cut(s) 334, 945
HindII GTYRAC 2 cut(s) 334, 945
HinfI GANTC 6 cut(s) 200, 305, 475, 645, 1114, 1140
HphI GGTGA 6 cut(s) 233, 391, 482, 578, 614, 808
Hpy166II GTNNAC 2 cut(s) 334, 945
Hpy188III TCNNGA 7 cut(s) 84, 302, 358, 548, 649, 671, 1111
Hpy8I GTNNAC 2 cut(s) 334, 945
HpyAV CCTTC 2 cut(s) 63, 436
HpyCH4III ACNGT 6 cut(s) 517, 615, 889, 1014, 1154, 1171
HpyCH4IV ACGT 2 cut(s) 659, 693
HpyCH4V TGCA 3 cut(s) 69, 663, 980
HpyF10VI GCNNNNNNNGC 6 cut(s) 70, 220, 416, 938, 1427, 1469
HpyF3I CTNAG 8 cut(s) 174, 231, 903, 1118, 1281, 1340, 1376, 1383
HpySE526I ACGT 2 cut(s) 659, 693
Hsp92I GRCGYC 1 cut(s) 1100
Hsp92II CATG 7 cut(s) 299, 340, 427, 439, 860, 1357, 1397
HspAI GCGC 1 cut(s) 1100
KasI GGCGCC 1 cut(s) 1099
KflI GGGWCCC 1 cut(s) 896
Kpn2I TCCGGA 1 cut(s) 301
Ksp22I TGATCA 2 cut(s) 651, 1083
Kzo9I GATC 8 cut(s) 18, 298, 523, 651, 667, 860, 1083, 1222
LmnI GCTCC 3 cut(s) 61, 220, 419
Lsp1109I GCAGC 1 cut(s) 1405
LweI GCATC 1 cut(s) 1417
MaeI CTAG 2 cut(s) 620, 923
MaeII ACGT 2 cut(s) 659, 693
MaeIII GTNAC 3 cut(s) 492, 814, 1246
MalI GATC 8 cut(s) 20, 300, 525, 653, 669, 862, 1085, 1224
MbiI CCGCTC 1 cut(s) 736
MboI GATC 8 cut(s) 18, 298, 523, 651, 667, 860, 1083, 1222
MfeI CAATTG 1 cut(s) 1179
MflI RGATCY 1 cut(s) 523
MhlI GDGCHC 2 cut(s) 66, 734
MlsI TGGCCA 1 cut(s) 1210
MluCI AATT 7 cut(s) 378, 789, 1162, 1179, 1212, 1241, 1326
MluNI TGGCCA 1 cut(s) 1210
Mly113I GGCGCC 1 cut(s) 1100
MlyI GAGTC 2 cut(s) 469, 654
MmeI TCCRAC 3 cut(s) 337, 915, 1048
Mox20I TGGCCA 1 cut(s) 1210
MroI TCCGGA 1 cut(s) 301
MscI TGGCCA 1 cut(s) 1210
MseI TTAA 1 cut(s) 1389
MslI CAYNNNNRTG 3 cut(s) 341, 958, 962
Msp20I TGGCCA 1 cut(s) 1210
MspR9I CCNGG 5 cut(s) 489, 490, 600, 949, 1002
MunI CAATTG 1 cut(s) 1179
MvnI CGCG 1 cut(s) 991
MwoI GCNNNNNNNGC 6 cut(s) 70, 220, 416, 938, 1427, 1469
NarI GGCGCC 1 cut(s) 1100
NciI CCSGG 5 cut(s) 489, 490, 600, 949, 1002
NcoI CCATGG 1 cut(s) 423
NdeI CATATG 1 cut(s) 959
NdeII GATC 8 cut(s) 18, 298, 523, 651, 667, 860, 1083, 1222
NlaIII CATG 7 cut(s) 299, 340, 427, 439, 860, 1357, 1397
NlaIV GGNNCC 6 cut(s) 222, 732, 897, 898, 996, 1101
NmeAIII GCCGAG 1 cut(s) 249
NmuCI GTSAC 1 cut(s) 814
NspV TTCGAA 1 cut(s) 793
PceI AGGCCT 1 cut(s) 984
PfeI GAWTC 4 cut(s) 200, 305, 1114, 1140
PflMI CCANNNNNTGG 1 cut(s) 505
PkrI GCNGC 3 cut(s) 216, 421, 1420
PleI GAGTC 2 cut(s) 469, 653
PluTI GGCGCC 1 cut(s) 1103
PmaCI CACGTG 1 cut(s) 660
PmlI CACGTG 1 cut(s) 660
PpsI GAGTC 2 cut(s) 469, 653
Ppu21I YACGTR 1 cut(s) 660
PpuMI RGGWCCY 2 cut(s) 896, 995
Psp124BI GAGCTC 1 cut(s) 66
Psp5II RGGWCCY 2 cut(s) 896, 995
PspCI CACGTG 1 cut(s) 660
PspEI GGTNACC 1 cut(s) 492
PspN4I GGNNCC 6 cut(s) 222, 732, 897, 898, 996, 1101
PspOMI GGGCCC 1 cut(s) 730
PspPI GGNCC 8 cut(s) 40, 445, 730, 731, 896, 967, 995, 1004
PspPPI RGGWCCY 2 cut(s) 896, 995
PsuI RGATCY 1 cut(s) 523
RsaI GTAC 3 cut(s) 692, 872, 914
RsaNI GTAC 3 cut(s) 691, 871, 913
RseI CAYNNNNRTG 3 cut(s) 341, 958, 962
SacI GAGCTC 1 cut(s) 66
SaqAI TTAA 1 cut(s) 1389
SatI GCNGC 3 cut(s) 215, 420, 1419
Sau3AI GATC 8 cut(s) 18, 298, 523, 651, 667, 860, 1083, 1222
Sau96I GGNCC 8 cut(s) 40, 445, 730, 731, 896, 967, 995, 1004
SchI GAGTC 2 cut(s) 469, 654
ScrFI CCNGG 5 cut(s) 489, 490, 600, 949, 1002
SduI GDGCHC 2 cut(s) 66, 734
SfaNI GCATC 1 cut(s) 1417
SfoI GGCGCC 1 cut(s) 1101
SfuI TTCGAA 1 cut(s) 793
SinI GGWCC 4 cut(s) 896, 967, 995, 1004
SmaI CCCGGG 1 cut(s) 490
SmiMI CAYNNNNRTG 3 cut(s) 341, 958, 962
SmlI CTYRAG 2 cut(s) 281, 527
SmoI CTYRAG 2 cut(s) 281, 527
Sse9I AATT 7 cut(s) 378, 789, 1162, 1179, 1212, 1241, 1326
SseBI AGGCCT 1 cut(s) 984
SspDI GGCGCC 1 cut(s) 1099
SspI AATATT 1 cut(s) 752
SspMI CTAG 2 cut(s) 620, 923
SstI GAGCTC 1 cut(s) 66
StuI AGGCCT 1 cut(s) 984
StyD4I CCNGG 5 cut(s) 487, 488, 598, 947, 1000
StyI CCWWGG 2 cut(s) 423, 927
TaaI ACNGT 6 cut(s) 517, 615, 889, 1014, 1154, 1171
TaiI ACGT 2 cut(s) 662, 696
TaqI TCGA 5 cut(s) 357, 559, 630, 687, 793
TasI AATT 7 cut(s) 378, 789, 1162, 1179, 1212, 1241, 1326
TatI WGTACW 1 cut(s) 870
TauI GCSGC 2 cut(s) 217, 422
TfiI GAWTC 4 cut(s) 200, 305, 1114, 1140
Tru1I TTAA 1 cut(s) 1389
Tru9I TTAA 1 cut(s) 1389
TscAI CASTG 1 cut(s) 1157
TseFI GTSAC 1 cut(s) 814
TseI GCWGC 1 cut(s) 1418
Tsp45I GTSAC 1 cut(s) 814
TspDTI ATGAA 8 cut(s) 353, 390, 673, 867, 946, 1362, 1370, 1432
TspMI CCCGGG 1 cut(s) 488
TspRI CASTG 1 cut(s) 1157
Van91I CCANNNNNTGG 1 cut(s) 505
VpaK11BI GGWCC 4 cut(s) 896, 967, 995, 1004
XapI RAATTY 3 cut(s) 378, 789, 1162
XcmI CCANNNNNNNNNTGG 1 cut(s) 1203
XmaI CCCGGG 1 cut(s) 488
XspI CTAG 2 cut(s) 620, 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.