Rorug02G0011200

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000111
Physical Location & Seq
Forward (+)
980364 .. 984958
4595 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0011200.1

Sequence Viewer

Length: 1371 bp
ATGAGTCTTGCCGAGTCCCCAGTGCACTCTTCTAGCAGTGATGGCTTTGCTGGGTTGCTTGAGAGAGAACTAGAGTCCGGTTCTTCGGAGTCGTCACCAGATGAAGGAGATAAAGCAGCTGATGACGATGGCAGTGATGTTGAAAGTGAGAGCAGGATAAAAAGGCGTAAGGTAGAGAATCTGGAAAGCTTAGAGGAAACCATTGCGTCAACTTCACAAGGACTCTCAGAAGAAAAGCCAGAAGCAACTGCAATAGAGGATATGTGTGCACATCCTGGTTCATTTGGAGATATGTGTTTTCTTTGTGGCCAGAGGTTGATTGAGCAGTCTGGTGTGACATTTGGGTACATACACAAGGGATTAAGACTTAATAATGATGAAATTGACCGGTTACGCAACACTGACATTAAGAAATCGCTAAATAATAAGAAACTTTACTTGGTACTTGATCTTGATCATACACTGCTAAATTCCACCCAGCTGAATCATATGACGGCAGAGGAAGAATATTTGATGAGCCCACCAGATTCTCTGCCAGATGATTTGAAAGGCAGCCTCTTCAGACTAGACTTTATGCGCATGATGACCAAGTTAAGGCCCTTTATTAAGACATTTTTGAAGGAAGCCAGTGAAATATTTGAAATGTATGTGTATACAATGGGTGACCGAGCCTATGCATTGGAAATGGCCAAGTTGCTTGATCCCAAAAAAGAGTACTTTGGTGATAGAGTGATATCACGCGATGATGGCACCCAAAAACATCAAAAGGGTCTAGATATTGTGCTTGGGCAAGAAAGTGCTGTTTTGATACTGGATGATACAGAAAATGCGTGGATAAAGCACAAGGACAATCTAATCTTGATGGAAAGATATCATTTCTTTAGATCTAGTTGTGCCCAATTTGGGTTCAATTGTGAGTCTCTTTCGGAGTTGAAGAGTGATGAGAGTGAGCCTGAAGGAGCTCTTGCAAATGTTCTTGACCTTCTTAAGCGAATTCACAAGATTTTCTTTTATGAATTGGAAGGCAATCTTATAGATAGAGATGTGAGGCAGGTTCTGAAAACCGTTAGAAAGGAAGTTTTGAAGGGGTGCAAAGTTGTGTTCAGCCGTATAATTCCTTCAAAAGTCCAGGCTGATAGTCATCACCTGTGGAAGATGGCAGAGCAGCTGGGAGCCATATGTTCAACCGAGGTGGATTCGTCAGTGACCCATGTAGTTGCATTAGATGCGGGAACTGAAAAGTCTCGCTGGGCAGTGAAACAGAATAAGTTTTTGGTCCATCCTCTCTGGCTTGAAGCAGCGAATTATATGTGGCGAAAGCAACCCGAAGAGAAGTTTCCTGTCACTGAAACGAAATCGAAAACCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

456

Amino Acids

51.81

Weight (kDa)

5.25

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NIF PF03031 146 - 292 1.3e-26 NLI interacting factor-like phosphatase
BRCT PF00533 359 - 432 1.4e-06 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 378 - 430 3.8e-07 twin BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 578
Acc36I ACCTGC 1 cut(s) 1042
AccB1I GGYRCC 1 cut(s) 749
AccI GTMKAC 1 cut(s) 653
AccII CGCG 1 cut(s) 741
AciI CCGC 1 cut(s) 1229
AclWI GGATC 1 cut(s) 695
AcoI YGGCCR 2 cut(s) 307, 687
AcsI RAATTY 2 cut(s) 469, 993
AcuI CTGAAG 2 cut(s) 544, 975
AfaI GTAC 3 cut(s) 347, 444, 716
AfiI CCNNNNNNNGG 3 cut(s) 104, 594, 903
AflII CTTAAG 1 cut(s) 986
AgeI ACCGGT 1 cut(s) 387
AjnI CCWGG 2 cut(s) 274, 1128
AjuI GAANNNNNNNTTGG 4 cut(s) 422, 454, 1256, 1288
AluBI AGCT 5 cut(s) 119, 189, 481, 962, 1168
AluI AGCT 5 cut(s) 119, 189, 481, 962, 1168
Alw21I GWGCWC 3 cut(s) 27, 271, 964
Alw26I GTCTC 2 cut(s) 924, 1248
Alw44I GTGCAC 2 cut(s) 23, 267
AlwI GGATC 1 cut(s) 695
AlwNI CAGNNNCTG 1 cut(s) 1057
AoxI GGCC 3 cut(s) 307, 596, 687
ApaLI GTGCAC 2 cut(s) 23, 267
ApeKI GCWGC 4 cut(s) 116, 552, 1165, 1298
ApoI RAATTY 2 cut(s) 469, 993
AsiGI ACCGGT 1 cut(s) 387
AspLEI GCGC 1 cut(s) 579
AspS9I GGNCC 2 cut(s) 597, 1276
AsuHPI GGTGA 4 cut(s) 87, 674, 734, 1136
AvaII GGWCC 1 cut(s) 1276
BaeGI GKGCMC 3 cut(s) 27, 271, 898
BalI TGGCCA 2 cut(s) 309, 689
BanI GGYRCC 1 cut(s) 749
BanII GRGCYC 2 cut(s) 521, 964
BarI GAAGNNNNNNTAC 2 cut(s) 1102, 1134
Bbv12I GWGCWC 3 cut(s) 27, 271, 964
BbvI GCAGC 4 cut(s) 128, 564, 1177, 1310
BccI CCATC 6 cut(s) 35, 122, 740, 856, 1150, 1287
BceAI ACGGC 2 cut(s) 510, 1092
BciT130I CCWGG 2 cut(s) 276, 1130
BclI TGATCA 1 cut(s) 454
BcoDI GTCTC 2 cut(s) 924, 1248
BfaI CTAG 5 cut(s) 33, 71, 566, 773, 888
BfrI CTTAAG 1 cut(s) 986
BfuAI ACCTGC 1 cut(s) 1042
BglII AGATCT 1 cut(s) 884
BisI GCNGC 4 cut(s) 117, 553, 1166, 1299
BlsI GCNGC 4 cut(s) 118, 554, 1167, 1300
BmcAI AGTACT 1 cut(s) 716
Bme1390I CCNGG 2 cut(s) 276, 1130
Bme18I GGWCC 1 cut(s) 1276
BmgT120I GGNCC 2 cut(s) 597, 1276
BmiI GGNNCC 2 cut(s) 751, 1174
BmrFI CCNGG 2 cut(s) 276, 1130
BmrI ACTGGG 2 cut(s) 14, 1360
BmsI GCATC 1 cut(s) 1216
BmuI ACTGGG 2 cut(s) 14, 1360
BpuEI CTTGAG 1 cut(s) 80
BsaBI GATNNNNATC 2 cut(s) 453, 1140
BsaJI CCNNGG 1 cut(s) 1188
BsaWI WCCGGW 2 cut(s) 77, 387
Bsc4I CCNNNNNNNGG 3 cut(s) 104, 594, 903
Bse118I RCCGGY 1 cut(s) 387
Bse1I ACTGG 4 cut(s) 20, 627, 816, 1366
Bse3DI GCAATG 1 cut(s) 201
Bse8I GATNNNNATC 2 cut(s) 453, 1140
BseBI CCWGG 2 cut(s) 276, 1130
BseDI CCNNGG 1 cut(s) 1188
BseGI GGATG 3 cut(s) 271, 820, 1279
BseJI GATNNNNATC 2 cut(s) 453, 1140
BseLI CCNNNNNNNGG 3 cut(s) 104, 594, 903
BseMI GCAATG 1 cut(s) 201
BseMII CTCAG 1 cut(s) 240
BseNI ACTGG 4 cut(s) 20, 627, 816, 1366
BseSI GKGCMC 3 cut(s) 27, 271, 898
BseXI GCAGC 4 cut(s) 128, 564, 1177, 1310
BseYI CCCAGC 4 cut(s) 50, 477, 1168, 1248
Bsh1236I CGCG 1 cut(s) 741
BshFI GGCC 3 cut(s) 309, 598, 689
BshNI GGYRCC 1 cut(s) 749
BshTI ACCGGT 1 cut(s) 387
BsiHKAI GWGCWC 3 cut(s) 27, 271, 964
BsiSI CCGG 2 cut(s) 78, 388
BslI CCNNNNNNNGG 3 cut(s) 104, 594, 903
BsmAI GTCTC 2 cut(s) 924, 1248
BsnI GGCC 3 cut(s) 309, 598, 689
Bsp1286I GDGCHC 5 cut(s) 27, 271, 521, 898, 964
Bsp143I GATC 4 cut(s) 448, 454, 700, 884
BspACI CCGC 1 cut(s) 1229
BspANI GGCC 3 cut(s) 309, 598, 689
BspCNI CTCAG 1 cut(s) 239
BspFNI CGCG 1 cut(s) 741
BspLI GGNNCC 2 cut(s) 751, 1174
BspMI ACCTGC 1 cut(s) 1042
BspPI GGATC 1 cut(s) 695
BspT107I GGYRCC 1 cut(s) 749
BspTI CTTAAG 1 cut(s) 986
BsrDI GCAATG 1 cut(s) 201
BsrFI RCCGGY 1 cut(s) 387
BsrI ACTGG 4 cut(s) 20, 627, 816, 1366
BssAI RCCGGY 1 cut(s) 387
BssECI CCNNGG 1 cut(s) 1188
BssMI GATC 4 cut(s) 448, 454, 700, 884
BssNAI GTATAC 1 cut(s) 654
Bst1107I GTATAC 1 cut(s) 654
Bst2UI CCWGG 2 cut(s) 276, 1130
Bst4CI ACNGT 1 cut(s) 1066
Bst6I CTCTTC 4 cut(s) 34, 563, 929, 1323
BstAFI CTTAAG 1 cut(s) 986
BstAPI GCANNNNNTGC 1 cut(s) 1226
BstDEI CTNAG 2 cut(s) 190, 226
BstEII GGTNACC 1 cut(s) 662
BstF5I GGATG 3 cut(s) 271, 820, 1279
BstFNI CGCG 1 cut(s) 741
BstHHI GCGC 1 cut(s) 579
BstKTI GATC 4 cut(s) 451, 457, 703, 887
BstMAI GTCTC 2 cut(s) 924, 1248
BstMBI GATC 4 cut(s) 448, 454, 700, 884
BstMWI GCNNNNNNNGC 3 cut(s) 42, 747, 1226
BstNI CCWGG 2 cut(s) 276, 1130
BstPI GGTNACC 1 cut(s) 662
BstSCI CCNGG 2 cut(s) 274, 1128
BstSLI GKGCMC 3 cut(s) 27, 271, 898
BstUI CGCG 1 cut(s) 741
BstV1I GCAGC 4 cut(s) 128, 564, 1177, 1310
BstX2I RGATCY 1 cut(s) 884
BstYI RGATCY 1 cut(s) 884
BstZ17I GTATAC 1 cut(s) 654
BsuRI GGCC 3 cut(s) 309, 598, 689
BtgZI GCGATG 1 cut(s) 756
BtsCI GGATG 3 cut(s) 271, 820, 1279
BtsI GCAGTG 4 cut(s) 43, 139, 461, 1260
BtsIMutI CAGTG 9 cut(s) 27, 43, 139, 399, 461, 634, 1209, 1260, 1344
BveI ACCTGC 1 cut(s) 1042
CaiI CAGNNNCTG 1 cut(s) 1057
CfoI GCGC 1 cut(s) 579
Cfr10I RCCGGY 1 cut(s) 387
Cfr13I GGNCC 2 cut(s) 597, 1276
CseI GACGC 1 cut(s) 195
Csp6I GTAC 3 cut(s) 346, 443, 715
CspAI ACCGGT 1 cut(s) 387
CspCI CAANNNNNGTGG 2 cut(s) 1173, 1208
CviAII CATG 2 cut(s) 580, 1211
CviQI GTAC 3 cut(s) 346, 443, 715
DdeI CTNAG 2 cut(s) 190, 226
DpnI GATC 4 cut(s) 450, 456, 702, 886
DpnII GATC 4 cut(s) 448, 454, 700, 884
EaeI YGGCCR 2 cut(s) 307, 687
Eam1104I CTCTTC 4 cut(s) 34, 563, 929, 1323
EarI CTCTTC 4 cut(s) 34, 563, 929, 1323
Ecl136II GAGCTC 1 cut(s) 962
Eco24I GRGCYC 2 cut(s) 521, 964
Eco32I GATATC 2 cut(s) 735, 872
Eco47I GGWCC 1 cut(s) 1276
Eco53kI GAGCTC 1 cut(s) 962
Eco57I CTGAAG 2 cut(s) 544, 975
Eco91I GGTNACC 1 cut(s) 662
EcoICRI GAGCTC 1 cut(s) 962
EcoO109I RGGNCCY 1 cut(s) 597
EcoO65I GGTNACC 1 cut(s) 662
EcoRI GAATTC 1 cut(s) 993
EcoRII CCWGG 2 cut(s) 274, 1128
EcoRV GATATC 2 cut(s) 735, 872
EcoT22I ATGCAT 1 cut(s) 679
EcoT38I GRGCYC 2 cut(s) 521, 964
FaeI CATG 2 cut(s) 583, 1214
FalI AAGNNNNNCTT 6 cut(s) 948, 980, 992, 1024, 1014, 1046
FatI CATG 2 cut(s) 579, 1210
FauI CCCGC 1 cut(s) 1222
FauNDI CATATG 2 cut(s) 489, 1178
FbaI TGATCA 1 cut(s) 454
FblI GTMKAC 1 cut(s) 653
Fnu4HI GCNGC 4 cut(s) 117, 553, 1166, 1299
FokI GGATG 3 cut(s) 258, 827, 1266
FriOI GRGCYC 2 cut(s) 521, 964
Fsp4HI GCNGC 4 cut(s) 117, 553, 1166, 1299
FspAI RTGCGCAY 1 cut(s) 578
FspBI CTAG 5 cut(s) 33, 71, 566, 773, 888
FspI TGCGCA 1 cut(s) 578
GlaI GCGC 1 cut(s) 578
GluI GCNGC 4 cut(s) 117, 553, 1166, 1299
GsaI CCCAGC 4 cut(s) 54, 481, 1172, 1252
HaeIII GGCC 3 cut(s) 309, 598, 689
HapII CCGG 2 cut(s) 78, 388
HgaI GACGC 1 cut(s) 195
HhaI GCGC 1 cut(s) 579
Hin1II CATG 2 cut(s) 583, 1214
Hin6I GCGC 1 cut(s) 577
HinP1I GCGC 1 cut(s) 577
HincII GTYRAC 1 cut(s) 210
HindII GTYRAC 1 cut(s) 210
HindIII AAGCTT 1 cut(s) 187
HpaII CCGG 2 cut(s) 78, 388
HphI GGTGA 4 cut(s) 87, 674, 734, 1136
Hpy166II GTNNAC 4 cut(s) 25, 210, 269, 654
Hpy188I TCNGA 5 cut(s) 88, 229, 563, 928, 1059
Hpy188III TCNNGA 5 cut(s) 182, 452, 773, 859, 977
Hpy8I GTNNAC 4 cut(s) 25, 210, 269, 654
HpyAV CCTTC 7 cut(s) 98, 613, 950, 992, 1016, 1078, 1128
HpyCH4III ACNGT 1 cut(s) 1066
HpyCH4V TGCA 7 cut(s) 25, 251, 269, 677, 968, 1092, 1220
HpyF10VI GCNNNNNNNGC 3 cut(s) 42, 747, 1226
HpyF3I CTNAG 2 cut(s) 190, 226
Hsp92II CATG 2 cut(s) 583, 1214
HspAI GCGC 1 cut(s) 577
Ksp22I TGATCA 1 cut(s) 454
Kzo9I GATC 4 cut(s) 448, 454, 700, 884
LmnI GCTCC 2 cut(s) 959, 1172
Lsp1109I GCAGC 4 cut(s) 128, 564, 1177, 1310
LweI GCATC 1 cut(s) 1216
MaeI CTAG 5 cut(s) 33, 71, 566, 773, 888
MaeIII GTNAC 6 cut(s) 93, 334, 390, 662, 1204, 1342
MalI GATC 4 cut(s) 450, 456, 702, 886
MboI GATC 4 cut(s) 448, 454, 700, 884
MboII GAAGA 8 cut(s) 21, 75, 242, 515, 550, 946, 1165, 1340
MfeI CAATTG 1 cut(s) 910
MflI RGATCY 1 cut(s) 884
MhlI GDGCHC 5 cut(s) 27, 271, 521, 898, 964
MlsI TGGCCA 2 cut(s) 309, 689
MluCI AATT 8 cut(s) 381, 469, 899, 910, 993, 1016, 1113, 1303
MluNI TGGCCA 2 cut(s) 309, 689
MlyI GAGTC 6 cut(s) 13, 23, 83, 98, 216, 926
MnlI CCTC 8 cut(s) 187, 250, 306, 493, 566, 1041, 1183, 1293
Mox20I TGGCCA 2 cut(s) 309, 689
Mph1103I ATGCAT 1 cut(s) 679
MscI TGGCCA 2 cut(s) 309, 689
MseI TTAA 6 cut(s) 362, 369, 408, 593, 606, 987
Msp20I TGGCCA 2 cut(s) 309, 689
MspA1I CMGCKG 3 cut(s) 119, 481, 1168
MspCI CTTAAG 1 cut(s) 986
MspI CCGG 2 cut(s) 78, 388
MspR9I CCNGG 2 cut(s) 276, 1130
MunI CAATTG 1 cut(s) 910
MvaI CCWGG 2 cut(s) 276, 1130
MvnI CGCG 1 cut(s) 741
MwoI GCNNNNNNNGC 3 cut(s) 42, 747, 1226
NdeI CATATG 2 cut(s) 489, 1178
NdeII GATC 4 cut(s) 448, 454, 700, 884
NlaIII CATG 2 cut(s) 583, 1214
NlaIV GGNNCC 2 cut(s) 751, 1174
NmeAIII GCCGAG 1 cut(s) 37
NmuCI GTSAC 5 cut(s) 93, 334, 662, 1204, 1342
NsbI TGCGCA 1 cut(s) 578
NsiI ATGCAT 1 cut(s) 679
PfeI GAWTC 4 cut(s) 178, 484, 527, 1196
PinAI ACCGGT 1 cut(s) 387
PkrI GCNGC 4 cut(s) 118, 554, 1167, 1300
PleI GAGTC 6 cut(s) 12, 22, 82, 97, 216, 925
PpsI GAGTC 6 cut(s) 12, 22, 82, 97, 216, 925
Psp124BI GAGCTC 1 cut(s) 964
Psp6I CCWGG 2 cut(s) 274, 1128
PspEI GGTNACC 1 cut(s) 662
PspFI CCCAGC 4 cut(s) 50, 477, 1168, 1248
PspGI CCWGG 2 cut(s) 274, 1128
PspN4I GGNNCC 2 cut(s) 751, 1174
PspPI GGNCC 2 cut(s) 597, 1276
PstNI CAGNNNCTG 1 cut(s) 1057
PsuI RGATCY 1 cut(s) 884
PvuII CAGCTG 3 cut(s) 119, 481, 1168
RsaI GTAC 3 cut(s) 347, 444, 716
RsaNI GTAC 3 cut(s) 346, 443, 715
SacI GAGCTC 1 cut(s) 964
SaqAI TTAA 6 cut(s) 362, 369, 408, 593, 606, 987
SatI GCNGC 4 cut(s) 117, 553, 1166, 1299
Sau3AI GATC 4 cut(s) 448, 454, 700, 884
Sau96I GGNCC 2 cut(s) 597, 1276
ScaI AGTACT 1 cut(s) 716
SchI GAGTC 6 cut(s) 13, 23, 83, 98, 216, 926
ScrFI CCNGG 2 cut(s) 276, 1130
SduI GDGCHC 5 cut(s) 27, 271, 521, 898, 964
SfaNI GCATC 1 cut(s) 1216
SinI GGWCC 1 cut(s) 1276
SmlI CTYRAG 2 cut(s) 59, 986
SmoI CTYRAG 2 cut(s) 59, 986
Sse9I AATT 8 cut(s) 381, 469, 899, 910, 993, 1016, 1113, 1303
SsiI CCGC 1 cut(s) 1229
SspI AATATT 2 cut(s) 509, 636
SspMI CTAG 5 cut(s) 33, 71, 566, 773, 888
SstI GAGCTC 1 cut(s) 964
StyD4I CCNGG 2 cut(s) 274, 1128
TaaI ACNGT 1 cut(s) 1066
TaqI TCGA 1 cut(s) 1358
TaqII GACCGA 1 cut(s) 681
TasI AATT 8 cut(s) 381, 469, 899, 910, 993, 1016, 1113, 1303
TatI WGTACW 1 cut(s) 714
TfiI GAWTC 4 cut(s) 178, 484, 527, 1196
Tru1I TTAA 6 cut(s) 362, 369, 408, 593, 606, 987
Tru9I TTAA 6 cut(s) 362, 369, 408, 593, 606, 987
TscAI CASTG 9 cut(s) 27, 43, 139, 406, 468, 634, 1209, 1260, 1351
TseFI GTSAC 5 cut(s) 93, 334, 662, 1204, 1342
TseI GCWGC 4 cut(s) 116, 552, 1165, 1298
Tsp45I GTSAC 5 cut(s) 93, 334, 662, 1204, 1342
TspDTI ATGAA 4 cut(s) 117, 270, 393, 1029
TspRI CASTG 9 cut(s) 27, 43, 139, 406, 468, 634, 1209, 1260, 1351
Vha464I CTTAAG 1 cut(s) 986
VneI GTGCAC 2 cut(s) 23, 267
VpaK11BI GGWCC 1 cut(s) 1276
XapI RAATTY 2 cut(s) 469, 993
XbaI TCTAGA 1 cut(s) 772
XmiI GTMKAC 1 cut(s) 653
XspI CTAG 5 cut(s) 33, 71, 566, 773, 888
ZrmI AGTACT 1 cut(s) 716
Zsp2I ATGCAT 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.