RchiOBHm_Chr5g0026871

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000111
Physical Location & Seq
Reverse (-)
20853523 .. 20854732
1210 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30645

Sequence Viewer

Length: 1173 bp
ATGTCAAGTGAGGTAGGCATGCCAAACCTTTCAGACGATATGTTTGAAGAGATACTCTCTCGACTTCCTGTCAAGTCTTTGTGTCGACTCAAGTGCGTCTCAAAGTCATGGCTCCATCTCATTGCTAAACCACACTTCATTGACACTCAACTCAACCGAACGCAGAAGCACAAAGTCATTTTCGGTACCACCGCTTCACTCTCTTCCTTGGACCCTGAAGCAGCTATAGATGATGACAATATGCCTCCCTCGTCGCTTGATTTTCCACTCAAGGGCAAACCCGGCACTAGGCTTGAGATGGTTGGTCTCTCTAATGGTTTGGCCTGCATCATGCCTCAACCGGATGCCTTGTTCATATTCAACCCTAGCACAGGGGAGTCCATGAGAGTTCCAGAAAGAGTGTTAACCAAAAAACAAAAAAAACGAAAAAGTACAGTCTTACACGGATTTGGTTATGCTCCTTCCATCAAGGATTACAGGATGGTCAAGATTATTTTAGATGATGGCGTTGTGCTCATGTTTTCGTTAACTAACAAGTCATGGAAAAGAGTTGAAAACATACCTGACGAATATGATTTGTGTTCTTGGAGGAAGTGGGATCCTCTGAACGGAGCTTTTCACTGGTTACTTGAGGACATGGGAGACGAGGACCCTCCTTTCATTGCTGCATTTGATTTAGCAGACGGCAAGTTCTCAAACTTGCCCCTACCTGAATCTTTCGACGGAGATTATAAGTACTTCACAACTGGTATTCTTGGAGGGTGTCTTTGTTTACTAGAATCTTATCCATTTGGATTCGAGTTCTCCTGTTGGGTTATGGAAAAATATGGTGTGAAGGAGTCTTGGACTAGGATTAGATTCGTGTGCCAAAACTCGGGGTTTCTTATTAGTGTGATGCCAATATGCTACTGGAAGAAGACCAAGGAATTACTAGCCATAATTGATTATTGCCATTTAGTACGCTTGACAAATCCAACGGATGGCACTTATTATGTTGGCCCCGTGAATAAAGACCGCTTCGATCATCCCATTCCCATCTATCTATCGAGTTGGTTACATGTGTATGTAGAGAGCCTTGCGTCTCCCCGTCTTATCTCAACAAGGAAAAAAAAAAAAAAAAGAAATAAAAAAAAGATGAGGCAGGACGGTGGCCCGGCGGTCCGGCAGCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

390

Amino Acids

44.57

Weight (kDa)

8.91

Isoelectric Point (pI)

42.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 8 - 46 9e-10 F-box domain
FBA_3 PF08268 97 - 292 2.5e-11 F-box associated beta propeller domain
FBA_1 PF07734 98 - 359 9.1e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 732
Acc65I GGTACC 1 cut(s) 185
AccB1I GGYRCC 1 cut(s) 185
AccB7I CCANNNNNTGG 1 cut(s) 980
AccI GTMKAC 1 cut(s) 85
AciI CCGC 3 cut(s) 192, 1015, 1157
AclWI GGATC 2 cut(s) 593, 606
AcuI CTGAAG 1 cut(s) 237
AfaI GTAC 4 cut(s) 187, 433, 737, 960
AfeI AGCGCT 1 cut(s) 1169
AfiI CCNNNNNNNGG 6 cut(s) 272, 288, 371, 608, 874, 980
AflIII ACRYGT 1 cut(s) 1057
AgsI TTSAA 3 cut(s) 47, 361, 554
AhdI GACNNNNNGTC 1 cut(s) 68
AloI GAACNNNNNNTCC 2 cut(s) 335, 367
AluBI AGCT 2 cut(s) 224, 614
AluI AGCT 2 cut(s) 224, 614
Alw21I GWGCWC 1 cut(s) 516
Alw26I GTCTC 4 cut(s) 103, 311, 636, 1086
AlwI GGATC 2 cut(s) 593, 606
Ama87I CYCGRG 1 cut(s) 874
Aor51HI AGCGCT 1 cut(s) 1169
AoxI GGCC 3 cut(s) 321, 997, 1150
ApeKI GCWGC 3 cut(s) 221, 665, 1165
ArsI GACNNNNNNTTYG 2 cut(s) 26, 58
Asp718I GGTACC 1 cut(s) 185
AspLEI GCGC 1 cut(s) 1170
AspS9I GGNCC 5 cut(s) 211, 649, 998, 1151, 1159
AsuC2I CCSGG 2 cut(s) 282, 1154
AvaI CYCGRG 1 cut(s) 874
AvaII GGWCC 3 cut(s) 211, 649, 1159
BamHI GGATCC 1 cut(s) 598
BanI GGYRCC 1 cut(s) 185
BarI GAAGNNNNNNTAC 2 cut(s) 178, 210
BbsI GAAGAC 1 cut(s) 923
Bbv12I GWGCWC 1 cut(s) 516
BbvI GCAGC 2 cut(s) 233, 652
BccI CCATC 7 cut(s) 123, 292, 473, 475, 497, 974, 1043
BceAI ACGGC 1 cut(s) 700
BcgI CGANNNNNNTGC 2 cut(s) 75, 109
BcnI CCSGG 2 cut(s) 282, 1154
BcoDI GTCTC 4 cut(s) 103, 311, 636, 1086
BfaI CTAG 5 cut(s) 288, 366, 776, 849, 932
BfmI CTRYAG 1 cut(s) 225
BfoI RGCGCY 1 cut(s) 1171
BisI GCNGC 3 cut(s) 222, 666, 1166
BlsI GCNGC 3 cut(s) 223, 667, 1167
BmcAI AGTACT 1 cut(s) 737
Bme1390I CCNGG 2 cut(s) 282, 1154
Bme18I GGWCC 3 cut(s) 211, 649, 1159
BmeRI GACNNNNNGTC 1 cut(s) 68
BmeT110I CYCGRG 1 cut(s) 874
BmgT120I GGNCC 5 cut(s) 211, 649, 998, 1151, 1159
BmiI GGNNCC 6 cut(s) 113, 187, 213, 600, 651, 1000
BmrFI CCNGG 2 cut(s) 282, 1154
BmsI GCATC 3 cut(s) 334, 336, 885
BpiI GAAGAC 1 cut(s) 923
BplI GAGNNNNNCTC 2 cut(s) 41, 73
BpuEI CTTGAG 4 cut(s) 74, 254, 314, 650
BpuMI CCSGG 2 cut(s) 282, 1154
BsaI GGTCTC 1 cut(s) 311
BsaJI CCNNGG 2 cut(s) 207, 921
BsaWI WCCGGW 1 cut(s) 340
Bsc4I CCNNNNNNNGG 6 cut(s) 272, 288, 371, 608, 874, 980
Bse1I ACTGG 3 cut(s) 626, 751, 914
Bse3DI GCAATG 2 cut(s) 120, 660
BseDI CCNNGG 2 cut(s) 207, 921
BseGI GGATG 4 cut(s) 349, 486, 985, 1024
BseLI CCNNNNNNNGG 6 cut(s) 272, 288, 371, 608, 874, 980
BseMI GCAATG 2 cut(s) 120, 660
BseNI ACTGG 3 cut(s) 626, 751, 914
BseXI GCAGC 2 cut(s) 233, 652
BshFI GGCC 3 cut(s) 323, 999, 1152
BshNI GGYRCC 1 cut(s) 185
BsiHKAI GWGCWC 1 cut(s) 516
BsiHKCI CYCGRG 1 cut(s) 874
BsiSI CCGG 4 cut(s) 282, 341, 1154, 1162
BslI CCNNNNNNNGG 6 cut(s) 272, 288, 371, 608, 874, 980
BsmAI GTCTC 4 cut(s) 103, 311, 636, 1086
BsmBI CGTCTC 3 cut(s) 103, 636, 1086
BsnI GGCC 3 cut(s) 323, 999, 1152
Bso31I GGTCTC 1 cut(s) 311
BsoBI CYCGRG 1 cut(s) 874
Bsp1286I GDGCHC 1 cut(s) 516
Bsp143I GATC 2 cut(s) 598, 1021
BspACI CCGC 3 cut(s) 192, 1015, 1157
BspANI GGCC 3 cut(s) 323, 999, 1152
BspLI GGNNCC 6 cut(s) 113, 187, 213, 600, 651, 1000
BspPI GGATC 2 cut(s) 593, 606
BspT107I GGYRCC 1 cut(s) 185
BspTNI GGTCTC 1 cut(s) 311
BsrDI GCAATG 2 cut(s) 120, 660
BsrI ACTGG 3 cut(s) 626, 751, 914
BssECI CCNNGG 2 cut(s) 207, 921
BssMI GATC 2 cut(s) 598, 1021
BssT1I CCWWGG 2 cut(s) 207, 921
Bst4CI ACNGT 2 cut(s) 436, 1148
Bst6I CTCTTC 2 cut(s) 42, 208
BstC8I GCNNGC 2 cut(s) 20, 325
BstENI CCTNNNNNAGG 1 cut(s) 369
BstF5I GGATG 4 cut(s) 349, 486, 985, 1024
BstH2I RGCGCY 1 cut(s) 1171
BstHHI GCGC 1 cut(s) 1170
BstKTI GATC 2 cut(s) 601, 1024
BstMAI GTCTC 4 cut(s) 103, 311, 636, 1086
BstMBI GATC 2 cut(s) 598, 1021
BstMWI GCNNNNNNNGC 1 cut(s) 282
BstNSI RCATGY 2 cut(s) 22, 1061
BstSCI CCNGG 2 cut(s) 280, 1152
BstSFI CTRYAG 1 cut(s) 225
BstV1I GCAGC 2 cut(s) 233, 652
BstV2I GAAGAC 1 cut(s) 923
BstX2I RGATCY 1 cut(s) 598
BstYI RGATCY 1 cut(s) 598
BsuRI GGCC 3 cut(s) 323, 999, 1152
BtsCI GGATG 4 cut(s) 349, 486, 985, 1024
BtsIMutI CAGTG 1 cut(s) 619
Cac8I GCNNGC 2 cut(s) 20, 325
CfoI GCGC 1 cut(s) 1170
Cfr13I GGNCC 5 cut(s) 211, 649, 998, 1151, 1159
CpoI CGGWCCG 1 cut(s) 1159
CseI GACGC 2 cut(s) 85, 1068
Csp6I GTAC 4 cut(s) 186, 432, 736, 959
CspI CGGWCCG 1 cut(s) 1159
CviAII CATG 8 cut(s) 19, 108, 331, 382, 517, 540, 637, 1058
CviJI RGCY 9 cut(s) 112, 224, 292, 323, 614, 935, 999, 1074, 1152
CviKI_1 RGCY 9 cut(s) 112, 224, 292, 323, 614, 935, 999, 1074, 1152
CviQI GTAC 4 cut(s) 186, 432, 736, 959
DpnI GATC 2 cut(s) 600, 1023
DpnII GATC 2 cut(s) 598, 1021
DriI GACNNNNNGTC 1 cut(s) 68
Eam1104I CTCTTC 2 cut(s) 42, 208
Eam1105I GACNNNNNGTC 1 cut(s) 68
EarI CTCTTC 2 cut(s) 42, 208
Eco130I CCWWGG 2 cut(s) 207, 921
Eco31I GGTCTC 1 cut(s) 311
Eco47I GGWCC 3 cut(s) 211, 649, 1159
Eco47III AGCGCT 1 cut(s) 1169
Eco57I CTGAAG 1 cut(s) 237
Eco88I CYCGRG 1 cut(s) 874
EcoNI CCTNNNNNAGG 1 cut(s) 369
EcoO109I RGGNCCY 1 cut(s) 649
EcoT14I CCWWGG 2 cut(s) 207, 921
ErhI CCWWGG 2 cut(s) 207, 921
Esp3I CGTCTC 3 cut(s) 103, 636, 1086
FaeI CATG 8 cut(s) 22, 111, 334, 385, 520, 543, 640, 1061
FatI CATG 8 cut(s) 18, 107, 330, 381, 516, 539, 636, 1057
FblI GTMKAC 1 cut(s) 85
Fnu4HI GCNGC 3 cut(s) 222, 666, 1166
FokI GGATG 4 cut(s) 356, 493, 992, 1011
Fsp4HI GCNGC 3 cut(s) 222, 666, 1166
FspBI CTAG 5 cut(s) 288, 366, 776, 849, 932
GlaI GCGC 1 cut(s) 1169
GluI GCNGC 3 cut(s) 222, 666, 1166
HaeII RGCGCY 1 cut(s) 1171
HaeIII GGCC 3 cut(s) 323, 999, 1152
HapII CCGG 4 cut(s) 282, 341, 1154, 1162
HgaI GACGC 2 cut(s) 85, 1068
HhaI GCGC 1 cut(s) 1170
Hin1II CATG 8 cut(s) 22, 111, 334, 385, 520, 543, 640, 1061
Hin6I GCGC 1 cut(s) 1168
HinP1I GCGC 1 cut(s) 1168
HincII GTYRAC 3 cut(s) 86, 405, 528
HindII GTYRAC 3 cut(s) 86, 405, 528
HinfI GANTC 7 cut(s) 87, 377, 713, 779, 795, 839, 858
HpaI GTTAAC 2 cut(s) 405, 528
HpaII CCGG 4 cut(s) 282, 341, 1154, 1162
Hpy166II GTNNAC 4 cut(s) 86, 405, 528, 773
Hpy188I TCNGA 2 cut(s) 34, 606
Hpy188III TCNNGA 3 cut(s) 60, 392, 487
Hpy8I GTNNAC 4 cut(s) 86, 405, 528, 773
Hpy99I CGWCG 2 cut(s) 256, 725
HpyAV CCTTC 2 cut(s) 471, 829
HpyCH4III ACNGT 2 cut(s) 436, 1148
HpyCH4V TGCA 2 cut(s) 327, 668
HpyF10VI GCNNNNNNNGC 1 cut(s) 282
Hsp92II CATG 8 cut(s) 22, 111, 334, 385, 520, 543, 640, 1061
HspAI GCGC 1 cut(s) 1168
KpnI GGTACC 1 cut(s) 189
KspAI GTTAAC 2 cut(s) 405, 528
Kzo9I GATC 2 cut(s) 598, 1021
LmnI GCTCC 3 cut(s) 117, 463, 611
Lsp1109I GCAGC 2 cut(s) 233, 652
LweI GCATC 3 cut(s) 334, 336, 885
MaeI CTAG 5 cut(s) 288, 366, 776, 849, 932
MaeIII GTNAC 2 cut(s) 624, 1053
MalI GATC 2 cut(s) 600, 1023
MboI GATC 2 cut(s) 598, 1021
MboII GAAGA 4 cut(s) 59, 195, 925, 928
MflI RGATCY 1 cut(s) 598
MhlI GDGCHC 1 cut(s) 516
MluCI AATT 2 cut(s) 926, 939
MlyI GAGTC 3 cut(s) 81, 386, 848
MmeI TCCRAC 1 cut(s) 998
MseI TTAA 2 cut(s) 404, 527
MslI CAYNNNNRTG 1 cut(s) 1062
MspI CCGG 4 cut(s) 282, 341, 1154, 1162
MspR9I CCNGG 2 cut(s) 282, 1154
MwoI GCNNNNNNNGC 1 cut(s) 282
NciI CCSGG 2 cut(s) 282, 1154
NdeII GATC 2 cut(s) 598, 1021
NlaIII CATG 8 cut(s) 22, 111, 334, 385, 520, 543, 640, 1061
NlaIV GGNNCC 6 cut(s) 113, 187, 213, 600, 651, 1000
NspI RCATGY 2 cut(s) 22, 1061
PaeI GCATGC 1 cut(s) 22
PciI ACATGT 1 cut(s) 1057
PfeI GAWTC 4 cut(s) 713, 779, 795, 858
PflMI CCANNNNNTGG 1 cut(s) 980
PkrI GCNGC 3 cut(s) 223, 667, 1167
PleI GAGTC 3 cut(s) 81, 385, 847
PpsI GAGTC 3 cut(s) 81, 385, 847
PpuMI RGGWCCY 1 cut(s) 649
PscI ACATGT 1 cut(s) 1057
PsiI TTATAA 1 cut(s) 732
Psp5II RGGWCCY 1 cut(s) 649
PspN4I GGNNCC 6 cut(s) 113, 187, 213, 600, 651, 1000
PspPI GGNCC 5 cut(s) 211, 649, 998, 1151, 1159
PspPPI RGGWCCY 1 cut(s) 649
PsuI RGATCY 1 cut(s) 598
RsaI GTAC 4 cut(s) 187, 433, 737, 960
RsaNI GTAC 4 cut(s) 186, 432, 736, 959
RseI CAYNNNNRTG 1 cut(s) 1062
Rsr2I CGGWCCG 1 cut(s) 1159
RsrII CGGWCCG 1 cut(s) 1159
SalI GTCGAC 1 cut(s) 84
SaqAI TTAA 2 cut(s) 404, 527
SatI GCNGC 3 cut(s) 222, 666, 1166
Sau3AI GATC 2 cut(s) 598, 1021
Sau96I GGNCC 5 cut(s) 211, 649, 998, 1151, 1159
ScaI AGTACT 1 cut(s) 737
SchI GAGTC 3 cut(s) 81, 386, 848
ScrFI CCNGG 2 cut(s) 282, 1154
SduI GDGCHC 1 cut(s) 516
SetI ASST 6 cut(s) 15, 30, 226, 565, 616, 712
SfaNI GCATC 3 cut(s) 334, 336, 885
SfcI CTRYAG 1 cut(s) 225
SinI GGWCC 3 cut(s) 211, 649, 1159
SmiMI CAYNNNNRTG 1 cut(s) 1062
SmlI CTYRAG 4 cut(s) 89, 269, 293, 629
SmoI CTYRAG 4 cut(s) 89, 269, 293, 629
SphI GCATGC 1 cut(s) 22
Sse9I AATT 2 cut(s) 926, 939
SsiI CCGC 3 cut(s) 192, 1015, 1157
SspMI CTAG 5 cut(s) 288, 366, 776, 849, 932
StyD4I CCNGG 2 cut(s) 280, 1152
StyI CCWWGG 2 cut(s) 207, 921
TaaI ACNGT 2 cut(s) 436, 1148
TaqI TCGA 6 cut(s) 61, 85, 720, 798, 1020, 1046
TasI AATT 2 cut(s) 926, 939
TatI WGTACW 2 cut(s) 431, 735
TfiI GAWTC 4 cut(s) 713, 779, 795, 858
Tru1I TTAA 2 cut(s) 404, 527
Tru9I TTAA 2 cut(s) 404, 527
TscAI CASTG 1 cut(s) 626
TseI GCWGC 3 cut(s) 221, 665, 1165
TspDTI ATGAA 3 cut(s) 127, 343, 649
TspGWI ACGGA 4 cut(s) 459, 624, 738, 992
TspRI CASTG 1 cut(s) 626
Van91I CCANNNNNTGG 1 cut(s) 980
VpaK11BI GGWCC 3 cut(s) 211, 649, 1159
XagI CCTNNNNNAGG 1 cut(s) 369
XceI RCATGY 2 cut(s) 22, 1061
XcmI CCANNNNNNNNNTGG 1 cut(s) 906
XmiI GTMKAC 1 cut(s) 85
XspI CTAG 5 cut(s) 288, 366, 776, 849, 932
ZrmI AGTACT 1 cut(s) 737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.