FvH4_5g38210

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000111
Physical Location & Seq
Forward (+)
28249868 .. 28251902
2035 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g38210.t1

Sequence Viewer

Length: 1167 bp
ATGGAAGACATTAATGGCCAGCTGACGGGGCACCAATTCCTCCTTCCTGCCGAGATCATAGTTGAGATTCTTTCAAGGCTATCAGTGAAGTCCTTATGCCGCTTCAGGTGCGTATCAAAGCCCTGGCGCTCTCTAATCACCAACACCAAGTTCATTGCACTGCACGCCAGGAAAGCCCTCGAGGATAAAGAGGTATTCTTACGGAGACGAAGAGTCATATTTAACAACGTGAAGTTATGTGGCCTTTACTCTATGGATCTAGATGAGTTTCTCAACCATGCAAACAATCACGATGGTTTAGTAACAGCCACCGAGCTCGATTTTTTTCGTAATGAATTTCATGCAGATGATCAAAAACATGGACCCCCTTTTGTTCCTTTCATCTACTCCTGTAATAACTTGTTGTTGTGCAGTGCCAACTGTGGTGGGTTATATTTGGTTAATCCTGCAACCAGGGAGATGAAGAAAGTACCAAGGACACCGTTATGGAGACCTAATATCAGGCCCGTAATTCTCTTGAGCTTATGTGGATTTGGATTTGATTACTCCAACAATGAGTATAAGGTGGTTGACGGGAAGATCTATTATGACTGTATCGTATTTAGTGTCTATAGATTGAAAACTGATGCTTGGCGACAGATAGAGTGCCACTCTTACAACTTCGGTTCTTGTTTTCAAGGGATTTTTCTGAATGGAGCTATTCATTGGTTAGCAGGGAAAGCGGGAGTTCCACACTCTCGGGTGATTGCAACTTTTCTATTAGCAGATGAGGAGTTTTCCGAAATTCAACTCCCACCCATCGCTCATACTAGTTTAGCAATATTGAGTGTGTTTAGAGATTGCTTATGTATAACGTTACGTGACACTGATCACACATTTTACGAGTTTTGGGTCATGAAAGAATATAGGGTGAACAAGTCTTGGACTAAAATGGTCTCCATGCCATATACGACCATATTGTCACATATTAGTTTTTCTACAAAATCTCATGATCTTATGGTGTACAAGAATTCATTGGTTATGTACGACTTTAAGAAAGAAAGTGGTAGGAAGCTACAAATTCGTGATATGCCTGAAGTTGGTAATTGTGTGGGGGTTTATGTAGAGGGACTTTTTCCGCTTATTGATCACGCTAGAGAAGGGCAAGATCGGAGTACGTCGACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

389

Amino Acids

44.73

Weight (kDa)

8.34

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 51 4.1e-11 F-box domain
F-box-like PF12937 15 - 49 5.2e-09 F-box-like
FBA_3 PF08268 124 - 359 1.1e-16 F-box associated beta propeller domain
FBA_1 PF07734 128 - 350 1.2e-25 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 958
AbsI CCTCGAGG 1 cut(s) 179
AccB1I GGYRCC 1 cut(s) 30
AccI GTMKAC 1 cut(s) 1160
AciI CCGC 3 cut(s) 100, 722, 1118
AclI AACGTT 1 cut(s) 854
AclWI GGATC 1 cut(s) 264
AcoI YGGCCR 1 cut(s) 16
AcsI RAATTY 4 cut(s) 335, 783, 1009, 1059
AcuI CTGAAG 2 cut(s) 88, 1095
AfaI GTAC 4 cut(s) 471, 1004, 1025, 1156
AfiI CCNNNNNNNGG 2 cut(s) 25, 1079
AgsI TTSAA 4 cut(s) 75, 619, 677, 788
AhdI GACNNNNNGTC 1 cut(s) 212
AhlI ACTAGT 1 cut(s) 809
AjnI CCWGG 3 cut(s) 122, 167, 452
AjuI GAANNNNNNNTTGG 4 cut(s) 27, 59, 134, 166
AluBI AGCT 5 cut(s) 22, 316, 522, 698, 1054
AluI AGCT 5 cut(s) 22, 316, 522, 698, 1054
Alw21I GWGCWC 1 cut(s) 318
Alw26I GTCTC 3 cut(s) 199, 484, 940
AlwI GGATC 1 cut(s) 264
Ama87I CYCGRG 2 cut(s) 179, 738
AoxI GGCC 3 cut(s) 16, 241, 503
ApoI RAATTY 4 cut(s) 335, 783, 1009, 1059
AseI ATTAAT 1 cut(s) 12
AspLEI GCGC 1 cut(s) 129
AspS9I GGNCC 2 cut(s) 362, 504
AsuHPI GGTGA 3 cut(s) 130, 754, 922
AvaI CYCGRG 2 cut(s) 179, 738
AvaII GGWCC 1 cut(s) 362
BaeGI GKGCMC 1 cut(s) 33
BalI TGGCCA 1 cut(s) 18
BanI GGYRCC 1 cut(s) 30
BanII GRGCYC 1 cut(s) 318
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 1 cut(s) 318
BccI CCATC 2 cut(s) 287, 806
BciT130I CCWGG 3 cut(s) 124, 169, 454
BclI TGATCA 3 cut(s) 349, 868, 1126
BcoDI GTCTC 3 cut(s) 199, 484, 940
BcuI ACTAGT 1 cut(s) 809
BfaI CTAG 3 cut(s) 260, 810, 1134
BfmI CTRYAG 1 cut(s) 610
BfoI RGCGCY 1 cut(s) 130
BglII AGATCT 1 cut(s) 579
BisI GCNGC 1 cut(s) 100
BlsI GCNGC 1 cut(s) 101
Bme1390I CCNGG 3 cut(s) 124, 169, 454
Bme18I GGWCC 1 cut(s) 362
BmeRI GACNNNNNGTC 1 cut(s) 212
BmeT110I CYCGRG 2 cut(s) 179, 738
BmgT120I GGNCC 2 cut(s) 362, 504
BmiI GGNNCC 2 cut(s) 32, 364
BmrFI CCNGG 3 cut(s) 124, 169, 454
BmsI GCATC 1 cut(s) 616
BpiI GAAGAC 1 cut(s) 12
BplI GAGNNNNNCTC 2 cut(s) 635, 667
BpuEI CTTGAG 1 cut(s) 538
BsaAI YACGTR 1 cut(s) 860
BsaI GGTCTC 2 cut(s) 484, 940
BsaJI CCNNGG 3 cut(s) 122, 453, 473
Bsc4I CCNNNNNNNGG 2 cut(s) 25, 1079
Bse3DI GCAATG 1 cut(s) 153
BseBI CCWGG 3 cut(s) 124, 169, 454
BseDI CCNNGG 3 cut(s) 122, 453, 473
BseLI CCNNNNNNNGG 2 cut(s) 25, 1079
BseMI GCAATG 1 cut(s) 153
BseRI GAGGAG 1 cut(s) 785
BseSI GKGCMC 1 cut(s) 33
BsgI GTGCAG 2 cut(s) 146, 430
BshFI GGCC 3 cut(s) 18, 243, 505
BshNI GGYRCC 1 cut(s) 30
BsiHKAI GWGCWC 1 cut(s) 318
BsiHKCI CYCGRG 2 cut(s) 179, 738
BslFI GGGAC 1 cut(s) 1122
BslI CCNNNNNNNGG 2 cut(s) 25, 1079
BsmAI GTCTC 3 cut(s) 199, 484, 940
BsmBI CGTCTC 1 cut(s) 199
BsmFI GGGAC 1 cut(s) 1122
BsnI GGCC 3 cut(s) 18, 243, 505
Bso31I GGTCTC 2 cut(s) 484, 940
BsoBI CYCGRG 2 cut(s) 179, 738
Bsp1286I GDGCHC 2 cut(s) 33, 318
Bsp1407I TGTACA 1 cut(s) 1002
Bsp143I GATC 8 cut(s) 54, 256, 349, 579, 868, 991, 1126, 1147
BspACI CCGC 3 cut(s) 100, 722, 1118
BspANI GGCC 3 cut(s) 18, 243, 505
BspHI TCATGA 2 cut(s) 894, 988
BspLI GGNNCC 2 cut(s) 32, 364
BspPI GGATC 1 cut(s) 264
BspT107I GGYRCC 1 cut(s) 30
BspTNI GGTCTC 2 cut(s) 484, 940
BsrDI GCAATG 1 cut(s) 153
BsrGI TGTACA 1 cut(s) 1002
BssECI CCNNGG 3 cut(s) 122, 453, 473
BssMI GATC 8 cut(s) 54, 256, 349, 579, 868, 991, 1126, 1147
BssT1I CCWWGG 1 cut(s) 473
Bst2UI CCWGG 3 cut(s) 124, 169, 454
Bst4CI ACNGT 3 cut(s) 422, 483, 593
Bst6I CTCTTC 1 cut(s) 205
BstAUI TGTACA 1 cut(s) 1002
BstBAI YACGTR 1 cut(s) 860
BstC8I GCNNGC 2 cut(s) 20, 165
BstH2I RGCGCY 1 cut(s) 130
BstHHI GCGC 1 cut(s) 129
BstKTI GATC 8 cut(s) 57, 259, 352, 582, 871, 994, 1129, 1150
BstMAI GTCTC 3 cut(s) 199, 484, 940
BstMBI GATC 8 cut(s) 54, 256, 349, 579, 868, 991, 1126, 1147
BstMWI GCNNNNNNNGC 5 cut(s) 28, 108, 164, 173, 719
BstNI CCWGG 3 cut(s) 124, 169, 454
BstSCI CCNGG 3 cut(s) 122, 167, 452
BstSFI CTRYAG 1 cut(s) 610
BstSLI GKGCMC 1 cut(s) 33
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 2 cut(s) 256, 579
BstYI RGATCY 2 cut(s) 256, 579
BsuRI GGCC 3 cut(s) 18, 243, 505
BtgZI GCGATG 1 cut(s) 784
BtsI GCAGTG 2 cut(s) 158, 418
BtsIMutI CAGTG 4 cut(s) 90, 158, 418, 864
Cac8I GCNNGC 2 cut(s) 20, 165
CciI TCATGA 2 cut(s) 894, 988
CfoI GCGC 1 cut(s) 129
Cfr13I GGNCC 2 cut(s) 362, 504
Csp6I GTAC 4 cut(s) 470, 1003, 1024, 1155
CspCI CAANNNNNGTGG 2 cut(s) 406, 441
CviAII CATG 6 cut(s) 278, 341, 359, 895, 940, 989
CviQI GTAC 4 cut(s) 470, 1003, 1024, 1155
DpnI GATC 8 cut(s) 56, 258, 351, 581, 870, 993, 1128, 1149
DpnII GATC 8 cut(s) 54, 256, 349, 579, 868, 991, 1126, 1147
DrdI GACNNNNNNGTC 1 cut(s) 958
DriI GACNNNNNGTC 1 cut(s) 212
DseDI GACNNNNNNGTC 1 cut(s) 958
EaeI YGGCCR 1 cut(s) 16
Eam1104I CTCTTC 1 cut(s) 205
Eam1105I GACNNNNNGTC 1 cut(s) 212
EarI CTCTTC 1 cut(s) 205
Ecl136II GAGCTC 1 cut(s) 316
Eco130I CCWWGG 1 cut(s) 473
Eco24I GRGCYC 1 cut(s) 318
Eco31I GGTCTC 2 cut(s) 484, 940
Eco47I GGWCC 1 cut(s) 362
Eco53kI GAGCTC 1 cut(s) 316
Eco57I CTGAAG 2 cut(s) 88, 1095
Eco88I CYCGRG 2 cut(s) 179, 738
EcoICRI GAGCTC 1 cut(s) 316
EcoRI GAATTC 1 cut(s) 1009
EcoRII CCWGG 3 cut(s) 122, 167, 452
EcoT14I CCWWGG 1 cut(s) 473
EcoT38I GRGCYC 1 cut(s) 318
ErhI CCWWGG 1 cut(s) 473
Esp3I CGTCTC 1 cut(s) 199
FaeI CATG 6 cut(s) 281, 344, 362, 898, 943, 992
FaqI GGGAC 1 cut(s) 1122
FatI CATG 6 cut(s) 277, 340, 358, 894, 939, 988
FauI CCCGC 1 cut(s) 715
FbaI TGATCA 3 cut(s) 349, 868, 1126
FblI GTMKAC 1 cut(s) 1160
Fnu4HI GCNGC 1 cut(s) 100
FriOI GRGCYC 1 cut(s) 318
Fsp4HI GCNGC 1 cut(s) 100
FspBI CTAG 3 cut(s) 260, 810, 1134
GlaI GCGC 1 cut(s) 128
GluI GCNGC 1 cut(s) 100
HaeII RGCGCY 1 cut(s) 130
HaeIII GGCC 3 cut(s) 18, 243, 505
HhaI GCGC 1 cut(s) 129
Hin1II CATG 6 cut(s) 281, 344, 362, 898, 943, 992
Hin6I GCGC 1 cut(s) 127
HinP1I GCGC 1 cut(s) 127
HincII GTYRAC 2 cut(s) 571, 1161
HindII GTYRAC 2 cut(s) 571, 1161
HinfI GANTC 2 cut(s) 67, 213
HphI GGTGA 3 cut(s) 130, 754, 922
Hpy166II GTNNAC 4 cut(s) 571, 913, 1003, 1161
Hpy188I TCNGA 3 cut(s) 690, 781, 1152
Hpy188III TCNNGA 6 cut(s) 260, 290, 517, 895, 989, 1064
Hpy8I GTNNAC 4 cut(s) 571, 913, 1003, 1161
Hpy99I CGWCG 2 cut(s) 1162, 1165
HpyAV CCTTC 2 cut(s) 53, 1133
HpyCH4III ACNGT 3 cut(s) 422, 483, 593
HpyCH4IV ACGT 5 cut(s) 228, 854, 859, 1157, 1163
HpyCH4V TGCA 7 cut(s) 158, 163, 281, 344, 411, 449, 749
HpyF10VI GCNNNNNNNGC 5 cut(s) 28, 108, 164, 173, 719
HpySE526I ACGT 5 cut(s) 228, 854, 859, 1157, 1163
Hsp92II CATG 6 cut(s) 281, 344, 362, 898, 943, 992
HspAI GCGC 1 cut(s) 127
Ksp22I TGATCA 3 cut(s) 349, 868, 1126
Kzo9I GATC 8 cut(s) 54, 256, 349, 579, 868, 991, 1126, 1147
LmnI GCTCC 1 cut(s) 695
LweI GCATC 1 cut(s) 616
MaeI CTAG 3 cut(s) 260, 810, 1134
MaeII ACGT 5 cut(s) 228, 854, 859, 1157, 1163
MaeIII GTNAC 4 cut(s) 301, 855, 860, 960
MalI GATC 8 cut(s) 56, 258, 351, 581, 870, 993, 1128, 1149
MboI GATC 8 cut(s) 54, 256, 349, 579, 868, 991, 1126, 1147
MboII GAAGA 4 cut(s) 17, 222, 475, 589
MflI RGATCY 2 cut(s) 256, 579
MhlI GDGCHC 2 cut(s) 33, 318
MlsI TGGCCA 1 cut(s) 18
MluCI AATT 7 cut(s) 35, 335, 510, 783, 1009, 1059, 1084
MluNI TGGCCA 1 cut(s) 18
MlyI GAGTC 1 cut(s) 222
MmeI TCCRAC 1 cut(s) 573
MnlI CCTC 6 cut(s) 50, 175, 184, 188, 763, 1099
Mox20I TGGCCA 1 cut(s) 18
MscI TGGCCA 1 cut(s) 18
MseI TTAA 4 cut(s) 12, 222, 441, 1032
MslI CAYNNNNRTG 2 cut(s) 345, 484
Msp20I TGGCCA 1 cut(s) 18
MspA1I CMGCKG 1 cut(s) 22
MspR9I CCNGG 3 cut(s) 124, 169, 454
MvaI CCWGG 3 cut(s) 124, 169, 454
MwoI GCNNNNNNNGC 5 cut(s) 28, 108, 164, 173, 719
NdeII GATC 8 cut(s) 54, 256, 349, 579, 868, 991, 1126, 1147
NlaIII CATG 6 cut(s) 281, 344, 362, 898, 943, 992
NlaIV GGNNCC 2 cut(s) 32, 364
NmeAIII GCCGAG 1 cut(s) 76
NmuCI GTSAC 2 cut(s) 860, 960
PaeR7I CTCGAG 1 cut(s) 179
PagI TCATGA 2 cut(s) 894, 988
PfeI GAWTC 1 cut(s) 67
PkrI GCNGC 1 cut(s) 101
PleI GAGTC 1 cut(s) 221
PpsI GAGTC 1 cut(s) 221
Ppu21I YACGTR 1 cut(s) 860
PshBI ATTAAT 1 cut(s) 12
Psp124BI GAGCTC 1 cut(s) 318
Psp1406I AACGTT 1 cut(s) 854
Psp6I CCWGG 3 cut(s) 122, 167, 452
PspGI CCWGG 3 cut(s) 122, 167, 452
PspN4I GGNNCC 2 cut(s) 32, 364
PspPI GGNCC 2 cut(s) 362, 504
PspXI VCTCGAGB 1 cut(s) 179
PsuI RGATCY 2 cut(s) 256, 579
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 4 cut(s) 471, 1004, 1025, 1156
RsaNI GTAC 4 cut(s) 470, 1003, 1024, 1155
RseI CAYNNNNRTG 2 cut(s) 345, 484
SacI GAGCTC 1 cut(s) 318
SalI GTCGAC 1 cut(s) 1159
SaqAI TTAA 4 cut(s) 12, 222, 441, 1032
SatI GCNGC 1 cut(s) 100
Sau3AI GATC 8 cut(s) 54, 256, 349, 579, 868, 991, 1126, 1147
Sau96I GGNCC 2 cut(s) 362, 504
SchI GAGTC 1 cut(s) 222
ScrFI CCNGG 3 cut(s) 124, 169, 454
SduI GDGCHC 2 cut(s) 33, 318
SfaNI GCATC 1 cut(s) 616
SfcI CTRYAG 1 cut(s) 610
Sfr274I CTCGAG 1 cut(s) 179
SgrDI CGTCGACG 1 cut(s) 1159
SinI GGWCC 1 cut(s) 362
SlaI CTCGAG 1 cut(s) 179
SmiMI CAYNNNNRTG 2 cut(s) 345, 484
SmlI CTYRAG 2 cut(s) 179, 517
SmoI CTYRAG 2 cut(s) 179, 517
SpeI ACTAGT 1 cut(s) 809
Sse9I AATT 7 cut(s) 35, 335, 510, 783, 1009, 1059, 1084
SsiI CCGC 3 cut(s) 100, 722, 1118
SspI AATATT 1 cut(s) 822
SspMI CTAG 3 cut(s) 260, 810, 1134
SstI GAGCTC 1 cut(s) 318
StyD4I CCNGG 3 cut(s) 122, 167, 452
StyI CCWWGG 1 cut(s) 473
TaaI ACNGT 3 cut(s) 422, 483, 593
TaiI ACGT 5 cut(s) 231, 857, 862, 1160, 1166
TaqI TCGA 3 cut(s) 180, 318, 1160
TasI AATT 7 cut(s) 35, 335, 510, 783, 1009, 1059, 1084
TatI WGTACW 1 cut(s) 1002
TauI GCSGC 1 cut(s) 102
TfiI GAWTC 1 cut(s) 67
Tru1I TTAA 4 cut(s) 12, 222, 441, 1032
Tru9I TTAA 4 cut(s) 12, 222, 441, 1032
TscAI CASTG 4 cut(s) 90, 165, 418, 871
TseFI GTSAC 2 cut(s) 860, 960
Tsp45I GTSAC 2 cut(s) 860, 960
TspDTI ATGAA 8 cut(s) 142, 329, 348, 370, 476, 692, 911, 1002
TspGWI ACGGA 1 cut(s) 217
TspRI CASTG 4 cut(s) 90, 165, 418, 871
VpaK11BI GGWCC 1 cut(s) 362
VspI ATTAAT 1 cut(s) 12
XapI RAATTY 4 cut(s) 335, 783, 1009, 1059
XbaI TCTAGA 1 cut(s) 259
XhoI CTCGAG 1 cut(s) 179
XmiI GTMKAC 1 cut(s) 1160
XspI CTAG 3 cut(s) 260, 810, 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.