Prupe.4G222200_v2.0.a1

F-box domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000111
Physical Location & Seq
Forward (+)
13949090 .. 13950633
1544 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G222200.1

Sequence Viewer

Length: 1275 bp
ATGGAGAAGCGGGGGTGGACCGGAAACTCAAACTCTAATGGCCAGCTTCCATCAATGATGATAGAGGAGATTCTATCAAGGCTACCAGTGAAGTCCTTATGCCGCTTCAAGTGTGTCTCAAAGTCATGGAGTTCCCTAATCTCCGACAACCCCAGTTTTGTTGCATCGCACTTGTACAAAGGCATTGGGGAGGATAAAGATGATCTACTCTTCCGAAGAAGAAGAAGAGTCATATTTACTGATGCCGCAGGTAATGGCCTCCACTCTATGCATCTTGACTACGATGATGAGTTTCTCAATCGTAACAACAAAGAAGATGCATCATCCCATCACGATAATCGCAAGCGTAACTGTTTTGATTTCGATGAGGAGGTTGGTGGTAGTAATTTATTAGTAACAACAGCCACGGAGCTCCAGTATGTTTATAGCGCGTTATCATGTATTTCGGTTTCCATGTTGGGTTGCTGCAACGGCTTGTTGTTATGCACGTTTTTATATGACCCGCAGTTATATTTGGTTAACCCAGCAACAAGGCAATCCAAGAAACTACCAGAAATACCAACAGAATATCTAATCGATGACCTCTACTACTTTTGCGACGTATATGGGTTTGGATTTGATTCTTCAACTCATCAACACACGGTCGTCAATGGTGTCGTCTACAGAACAAGTATCCGTGATGATGATGAAGGAGGGGTTCAGTTTAATGTGTATACATTGGAAACTAATTCTTGGCGACAGATTCATGAGTACGTATTTCCCTACCACATCTTTCCATCTCGAAATAAAGGGACCCTGCTGAATGGAAATCTCCATTGGTTGGGGACAAGAGTCGGAGAAGATGATGATCATCATTCATCTTTGTTGATTGTCTCCCTGGTTTTAACACAAGATCAGGAGGAGGTTCGAGAAATTCCACTGCCGCGCGAAATCGACTCTTCTCGAACTCTTCATAGTATTCTCGGGGTCTTCAGAGAATGGTTATGTGTAACTTTTGAGGTTGATTATGGTAAAGCAACACCAACATTCAATGAGTTTTGGGTCATGAAGGAATATGGAGTGGGCGAATCTTGGACTAGAATGAGGGTCTCCATCCCATATTGGAAGTTGTCACATTCTGGTTTCTGGACAAAGTCTCATGATTTGATGGTGTTTGAAGAAGAGTTGATTATGTACAATTTTAACGATCACAGCTTTCGGAATCTATGCGTTCGTGAAATTGGCAAAGTTGGTAGTGTTGTAACCTACTGGGAGAGCATTGTTTCACTTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

425

Amino Acids

49.01

Weight (kDa)

5.52

Isoelectric Point (pI)

39.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06240
fragaria_vesca FvH4_1g04511 FvH4_1g04521 FvH4_1g05182 FvH4_1g05210 FvH4_1g05230 FvH4_1g05231 FvH4_1g05232 FvH4_1g05391 FvH4_1g05420 FvH4_2g41451 FvH4_3g15810 FvH4_3g15810 FvH4_3g18161 FvH4_3g19801 FvH4_3g39980 FvH4_3g39980 FvH4_3g39980 FvH4_3g39990 FvH4_3g40020 FvH4_3g40020 FvH4_3g40031 FvH4_3g40040 FvH4_4g32891 FvH4_5g33121 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g33140 FvH4_5g38210 FvH4_5g38211 FvH4_5g39231 FvH4_6g16940 FvH4_6g33181 FvH4_7g09411 FvH4_7g23271 FvH4_7g26741 FvH4_7g28012 FvH4_7g28013 FvH4_7g28031 FvH4_7g28041
malus_domestica MD03G1104200.v1.1 MD03G1139900.v1.1 MD03G1192800.v1.1 MD10G1202200.v1.1 MD11G1131100.v1.1 MD11G1202700.v1.1 MD11G1203000.v1.1
prunus_persica Prupe.2G163500_v2.0.a1 Prupe.4G140000_v2.0.a1 Prupe.4G140100_v2.0.a1 Prupe.4G222200_v2.0.a1 Prupe.4G236200_v2.0.a1 Prupe.4G236300_v2.0.a1 Prupe.4G236400_v2.0.a1 Prupe.4G237500_v2.0.a1 Prupe.6G125500_v2.0.a1
pyrus_communis pycom03g14510 pycom05g20120 pycom11g10840 pycom11g17520 pycom11g17590 pycom15g03310
rosa_chinensis RchiOBHm_Chr0c44g0503541 RchiOBHm_Chr2g0090931 RchiOBHm_Chr2g0090941 RchiOBHm_Chr2g0090951 RchiOBHm_Chr2g0090961 RchiOBHm_Chr2g0092791 RchiOBHm_Chr2g0099041 RchiOBHm_Chr2g0169971 RchiOBHm_Chr2g0170021 RchiOBHm_Chr4g0386131 RchiOBHm_Chr4g0386141 RchiOBHm_Chr4g0386161 RchiOBHm_Chr4g0386281 RchiOBHm_Chr4g0386291 RchiOBHm_Chr4g0440811 RchiOBHm_Chr5g0026601 RchiOBHm_Chr5g0026621 RchiOBHm_Chr5g0026871 RchiOBHm_Chr5g0072021 RchiOBHm_Chr5g0072031 RchiOBHm_Chr5g0072171 RchiOBHm_Chr5g0072181 RchiOBHm_Chr7g0231281 RchiOBHm_Chr7g0231301 RchiOBHm_Chr7g0240141
rosa_laevigata RLG00000000695 RLG00000001421 RLG00000004300 RLG00000006148 RLG00000006151 RLG00000016157 RLG00000016158 RLG00000016159 RLG00000016160 RLG00000016161 RLG00000020474 RLG00000021915 RLG00000029159 RLG00000032939 RLG00000032940 RLG00000032966 RLG00000036270 RLG00000036272 RLG00000036280 RLG00000036284
rosa_multiflora Rmu_co8434269.1_g000001 Rmu_sc0000792.1_g000017 Rmu_sc0000792.1_g000018 Rmu_sc0000792.1_g000019 Rmu_sc0001132.1_g000008 Rmu_sc0001152.1_g000004 Rmu_sc0001152.1_g000033 Rmu_sc0001583.1_g000004 Rmu_sc0003305.1_g000001 Rmu_sc0003333.1_g000005 Rmu_sc0003396.1_g000010 Rmu_sc0003396.1_g000011 Rmu_sc0003396.1_g000017 Rmu_sc0004571.1_g000004 Rmu_sc0004851.1_g000003 Rmu_sc0004851.1_g000004 Rmu_sc0005008.1_g000015 Rmu_sc0006854.1_g000016 Rmu_sc0006854.1_g000023 Rmu_sc0009422.1_g000009 Rmu_sc0010610.1_g000003 Rmu_sc0018952.1_g000008 Rmu_sc0037136.1_g000001 Rmu_ssc0000172.1_g000016 Rmu_ssc0000389.1_g000005
rosa_roxburghii Rroxscaffold_1G00009050 Rroxscaffold_1G00009090 Rroxscaffold_1G00009130 Rroxscaffold_1G00009230 Rroxscaffold_1G00044650 Rroxscaffold_1G00052600 Rroxscaffold_1G00052610 Rroxscaffold_1G00052860 Rroxscaffold_1G00052880 Rroxscaffold_2G00081700 Rroxscaffold_2G00148820 Rroxscaffold_2G00150560 Rroxscaffold_2G00150570 Rroxscaffold_2G00150590 Rroxscaffold_2G00150600 Rroxscaffold_2G00150630 Rroxscaffold_2G00150730 Rroxscaffold_2G00150740 Rroxscaffold_3G00229360 Rroxscaffold_3G00262430 Rroxscaffold_4G00313090 Rroxscaffold_5G00381610
rosa_rugosa Rorug01G0285600 Rorug02G0011200 Rorug02G0011300 Rorug02G0011400 Rorug02G0012500 Rorug02G0012600 Rorug02G0012700 Rorug02G0029300 Rorug02G0075800 Rorug02G0075900 Rorug02G0419600 Rorug02G0544800 Rorug04G0112200 Rorug05G0094100 Rorug05G0094100 Rorug05G0094200 Rorug05G0415900 Rorug05G0415900 Rorug05G0416000 Rorug05G0416100 Rorug05G0416200 Rorug05G0416300 Rorug05G0416700 Rorug05G0416800 Rorug07G0265700 Rorug07G0265800 Rorug07G0265900 Rorug07G0266000 Rorug07G0266100
rosa_samantha Rh2AG057300 Rh2AG057400 Rh2AG058700 Rh2AG478800 Rh2AG616800 Rh2DG056700 Rh2DG056800 Rh2DG056900 Rh2DG073500 Rh2DG129700 Rh2DG639800 Rh4AG380100 Rh4DG386700 Rh5AG187500 Rh5AG187700 Rh5AG189200 Rh5AG472100 Rh5AG472800 Rh5BG184000 Rh5BG184200 Rh5BG185800 Rh5BG186500 Rh5CG204000 Rh5CG205800 Rh5DG186300 Rh5DG186500 Rh5DG188100 Rh5DG503500 Rh5DG503700 Rh5DG504000 Rh5DG504100 Rh5DG504700 Rh5DG504900 Rh5DG505000 Rh7AG419500 Rh7AG419800 Rh7CG439300 Rh7DG413100
rosa_wichuraiana Rw0G002880 Rw1G026240 Rw2G005200 Rw2G005210 Rw2G005820 Rw2G009640 Rw5G016980 Rw5G017000 Rw5G017190 Rw5G043880 Rw7G011300 Rw7G034680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 239
AccB7I CCANNNNNTGG 1 cut(s) 820
AccI GTMKAC 2 cut(s) 660, 713
AccII CGCG 3 cut(s) 431, 925, 927
AciI CCGC 5 cut(s) 10, 103, 246, 503, 923
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 1 cut(s) 912
AcuI CTGAAG 1 cut(s) 955
AfaI GTAC 3 cut(s) 176, 752, 1175
AfiI CCNNNNNNNGG 1 cut(s) 820
AflII CTTAAG 1 cut(s) 1268
AgsI TTSAA 4 cut(s) 109, 627, 1030, 1157
AjnI CCWGG 1 cut(s) 876
AjuI GAANNNNNNNTTGG 2 cut(s) 799, 831
AluBI AGCT 3 cut(s) 46, 412, 1194
AluI AGCT 3 cut(s) 46, 412, 1194
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 4 cut(s) 121, 877, 1093, 1140
Ama87I CYCGRG 1 cut(s) 962
AoxI GGCC 2 cut(s) 40, 256
ApeKI GCWGC 1 cut(s) 465
ApoI RAATTY 1 cut(s) 912
AspLEI GCGC 2 cut(s) 431, 927
AspS9I GGNCC 2 cut(s) 18, 792
AvaI CYCGRG 1 cut(s) 962
AvaII GGWCC 2 cut(s) 18, 792
BalI TGGCCA 1 cut(s) 42
BanII GRGCYC 1 cut(s) 414
BbsI GAAGAC 1 cut(s) 961
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 1 cut(s) 452
BccI CCATC 5 cut(s) 58, 336, 784, 1100, 1141
BceAI ACGGC 1 cut(s) 487
BciT130I CCWGG 1 cut(s) 878
BciVI GTATCC 1 cut(s) 683
BclI TGATCA 1 cut(s) 847
BcoDI GTCTC 4 cut(s) 121, 877, 1093, 1140
BfaI CTAG 1 cut(s) 1077
BfmI CTRYAG 1 cut(s) 661
BfrI CTTAAG 1 cut(s) 1268
BfuAI ACCTGC 1 cut(s) 239
BfuI GTATCC 1 cut(s) 683
BisI GCNGC 4 cut(s) 103, 246, 466, 923
BlsI GCNGC 4 cut(s) 104, 247, 467, 924
Bme1390I CCNGG 1 cut(s) 878
Bme18I GGWCC 2 cut(s) 18, 792
BmeT110I CYCGRG 1 cut(s) 962
BmgT120I GGNCC 2 cut(s) 18, 792
BmiI GGNNCC 2 cut(s) 793, 794
BmrFI CCNGG 1 cut(s) 878
BmrI ACTGGG 2 cut(s) 147, 1258
BmsI GCATC 5 cut(s) 173, 232, 280, 307, 329
BmuI ACTGGG 2 cut(s) 147, 1258
BoxI GACNNNNGTC 1 cut(s) 830
BpiI GAAGAC 1 cut(s) 961
BpmI CTGGAG 1 cut(s) 398
Bsa29I ATCGAT 1 cut(s) 576
BsaAI YACGTR 1 cut(s) 754
BsaBI GATNNNNATC 2 cut(s) 846, 849
BsaI GGTCTC 1 cut(s) 1093
BsaJI CCNNGG 2 cut(s) 405, 876
BsaWI WCCGGW 1 cut(s) 20
BsaXI ACNNNNNCTCC 2 cut(s) 401, 431
Bsc4I CCNNNNNNNGG 1 cut(s) 820
Bse1I ACTGG 4 cut(s) 86, 153, 415, 1253
Bse8I GATNNNNATC 2 cut(s) 846, 849
BseBI CCWGG 1 cut(s) 878
BseCI ATCGAT 1 cut(s) 576
BseDI CCNNGG 2 cut(s) 405, 876
BseGI GGATG 2 cut(s) 323, 1092
BseJI GATNNNNATC 2 cut(s) 846, 849
BseLI CCNNNNNNNGG 1 cut(s) 820
BseNI ACTGG 4 cut(s) 86, 153, 415, 1253
BseRI GAGGAG 3 cut(s) 80, 383, 914
BseXI GCAGC 1 cut(s) 452
BseYI CCCAGC 1 cut(s) 523
Bsh1236I CGCG 3 cut(s) 431, 925, 927
Bsh1285I CGRYCG 1 cut(s) 645
BshFI GGCC 2 cut(s) 42, 258
BshVI ATCGAT 1 cut(s) 576
BsiEI CGRYCG 1 cut(s) 645
BsiHKAI GWGCWC 1 cut(s) 414
BsiHKCI CYCGRG 1 cut(s) 962
BsiSI CCGG 1 cut(s) 21
BslFI GGGAC 2 cut(s) 805, 838
BslI CCNNNNNNNGG 1 cut(s) 820
BsmAI GTCTC 4 cut(s) 121, 877, 1093, 1140
BsmFI GGGAC 2 cut(s) 805, 838
BsnI GGCC 2 cut(s) 42, 258
Bso31I GGTCTC 1 cut(s) 1093
BsoBI CYCGRG 1 cut(s) 962
Bsp1286I GDGCHC 1 cut(s) 414
Bsp1407I TGTACA 2 cut(s) 174, 1173
Bsp143I GATC 4 cut(s) 202, 847, 892, 1186
BspACI CCGC 5 cut(s) 10, 103, 246, 503, 923
BspANI GGCC 2 cut(s) 42, 258
BspDI ATCGAT 1 cut(s) 576
BspFNI CGCG 3 cut(s) 431, 925, 927
BspHI TCATGA 3 cut(s) 745, 1044, 1138
BspLI GGNNCC 2 cut(s) 793, 794
BspMI ACCTGC 1 cut(s) 239
BspTI CTTAAG 1 cut(s) 1268
BspTNI GGTCTC 1 cut(s) 1093
BsrGI TGTACA 2 cut(s) 174, 1173
BsrI ACTGG 4 cut(s) 86, 153, 415, 1253
BssECI CCNNGG 2 cut(s) 405, 876
BssMI GATC 4 cut(s) 202, 847, 892, 1186
BssNAI GTATAC 1 cut(s) 714
Bst1107I GTATAC 1 cut(s) 714
Bst2UI CCWGG 1 cut(s) 878
Bst4CI ACNGT 2 cut(s) 353, 643
Bst6I CTCTTC 5 cut(s) 215, 220, 943, 954, 1155
BstAFI CTTAAG 1 cut(s) 1268
BstAUI TGTACA 2 cut(s) 174, 1173
BstBAI YACGTR 1 cut(s) 754
BstC8I GCNNGC 2 cut(s) 44, 344
BstDSI CCRYGG 1 cut(s) 405
BstF5I GGATG 2 cut(s) 323, 1092
BstFNI CGCG 3 cut(s) 431, 925, 927
BstHHI GCGC 2 cut(s) 431, 927
BstKTI GATC 4 cut(s) 205, 850, 895, 1189
BstMAI GTCTC 4 cut(s) 121, 877, 1093, 1140
BstMBI GATC 4 cut(s) 202, 847, 892, 1186
BstMCI CGRYCG 1 cut(s) 645
BstMWI GCNNNNNNNGC 1 cut(s) 471
BstNI CCWGG 1 cut(s) 878
BstPAI GACNNNNGTC 1 cut(s) 830
BstSCI CCNGG 1 cut(s) 876
BstSFI CTRYAG 1 cut(s) 661
BstSNI TACGTA 1 cut(s) 754
BstUI CGCG 3 cut(s) 431, 925, 927
BstV1I GCAGC 1 cut(s) 452
BstV2I GAAGAC 1 cut(s) 961
BstZ17I GTATAC 1 cut(s) 714
Bsu15I ATCGAT 1 cut(s) 576
BsuI GTATCC 1 cut(s) 683
BsuRI GGCC 2 cut(s) 42, 258
BsuTUI ATCGAT 1 cut(s) 576
BtgI CCRYGG 1 cut(s) 405
BtgZI GCGATG 1 cut(s) 150
BtsCI GGATG 2 cut(s) 323, 1092
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 2 cut(s) 93, 917
BveI ACCTGC 1 cut(s) 239
Cac8I GCNNGC 2 cut(s) 44, 344
CciI TCATGA 3 cut(s) 745, 1044, 1138
CfoI GCGC 2 cut(s) 431, 927
Cfr13I GGNCC 2 cut(s) 18, 792
ClaI ATCGAT 1 cut(s) 576
Csp6I GTAC 3 cut(s) 175, 751, 1174
CviAII CATG 6 cut(s) 126, 438, 454, 746, 1045, 1139
CviJI RGCY 8 cut(s) 42, 46, 82, 258, 404, 412, 474, 1194
CviKI_1 RGCY 8 cut(s) 42, 46, 82, 258, 404, 412, 474, 1194
CviQI GTAC 3 cut(s) 175, 751, 1174
DpnI GATC 4 cut(s) 204, 849, 894, 1188
DpnII GATC 4 cut(s) 202, 847, 892, 1186
EaeI YGGCCR 1 cut(s) 40
Eam1104I CTCTTC 5 cut(s) 215, 220, 943, 954, 1155
EarI CTCTTC 5 cut(s) 215, 220, 943, 954, 1155
Ecl136II GAGCTC 1 cut(s) 412
Eco105I TACGTA 1 cut(s) 754
Eco24I GRGCYC 1 cut(s) 414
Eco31I GGTCTC 1 cut(s) 1093
Eco47I GGWCC 2 cut(s) 18, 792
Eco53kI GAGCTC 1 cut(s) 412
Eco57I CTGAAG 1 cut(s) 955
Eco88I CYCGRG 1 cut(s) 962
EcoICRI GAGCTC 1 cut(s) 412
EcoO109I RGGNCCY 1 cut(s) 792
EcoRII CCWGG 1 cut(s) 876
EcoT22I ATGCAT 2 cut(s) 273, 322
EcoT38I GRGCYC 1 cut(s) 414
FaeI CATG 6 cut(s) 129, 441, 457, 749, 1048, 1142
FaqI GGGAC 2 cut(s) 805, 838
FatI CATG 6 cut(s) 125, 437, 453, 745, 1044, 1138
FauI CCCGC 2 cut(s) 3, 510
FbaI TGATCA 1 cut(s) 847
FblI GTMKAC 2 cut(s) 660, 713
Fnu4HI GCNGC 4 cut(s) 103, 246, 466, 923
FokI GGATG 2 cut(s) 310, 1079
FriOI GRGCYC 1 cut(s) 414
Fsp4HI GCNGC 4 cut(s) 103, 246, 466, 923
FspBI CTAG 1 cut(s) 1077
GlaI GCGC 2 cut(s) 430, 926
GluI GCNGC 4 cut(s) 103, 246, 466, 923
GsaI CCCAGC 1 cut(s) 527
GsuI CTGGAG 1 cut(s) 398
HaeIII GGCC 2 cut(s) 42, 258
HapII CCGG 1 cut(s) 21
HhaI GCGC 2 cut(s) 431, 927
Hin1II CATG 6 cut(s) 129, 441, 457, 749, 1048, 1142
Hin6I GCGC 2 cut(s) 429, 925
HinP1I GCGC 2 cut(s) 429, 925
HincII GTYRAC 1 cut(s) 520
HindII GTYRAC 1 cut(s) 520
HinfI GANTC 8 cut(s) 70, 228, 620, 742, 831, 935, 1067, 1201
HpaI GTTAAC 1 cut(s) 520
HpaII CCGG 1 cut(s) 21
Hpy166II GTNNAC 4 cut(s) 18, 520, 661, 714
Hpy188I TCNGA 5 cut(s) 145, 215, 836, 974, 1200
Hpy8I GTNNAC 4 cut(s) 18, 520, 661, 714
Hpy99I CGWCG 1 cut(s) 602
HpyAV CCTTC 2 cut(s) 683, 1042
HpyCH4III ACNGT 2 cut(s) 353, 643
HpyCH4IV ACGT 3 cut(s) 488, 600, 753
HpyCH4V TGCA 5 cut(s) 164, 271, 320, 468, 486
HpyF10VI GCNNNNNNNGC 1 cut(s) 471
HpySE526I ACGT 3 cut(s) 488, 600, 753
Hsp92II CATG 6 cut(s) 129, 441, 457, 749, 1048, 1142
HspAI GCGC 2 cut(s) 429, 925
KflI GGGWCCC 1 cut(s) 792
Ksp22I TGATCA 1 cut(s) 847
KspAI GTTAAC 1 cut(s) 520
Kzo9I GATC 4 cut(s) 202, 847, 892, 1186
LmnI GCTCC 2 cut(s) 409, 417
Lsp1109I GCAGC 1 cut(s) 452
LweI GCATC 5 cut(s) 173, 232, 280, 307, 329
MaeI CTAG 1 cut(s) 1077
MaeII ACGT 3 cut(s) 488, 600, 753
MaeIII GTNAC 6 cut(s) 302, 347, 394, 988, 1110, 1240
MalI GATC 4 cut(s) 204, 849, 894, 1188
MboI GATC 4 cut(s) 202, 847, 892, 1186
MhlI GDGCHC 1 cut(s) 414
MlsI TGGCCA 1 cut(s) 42
MluCI AATT 5 cut(s) 385, 727, 912, 1177, 1218
MluNI TGGCCA 1 cut(s) 42
MlyI GAGTC 3 cut(s) 237, 840, 929
MmeI TCCRAC 2 cut(s) 168, 814
Mox20I TGGCCA 1 cut(s) 42
Mph1103I ATGCAT 2 cut(s) 273, 322
MscI TGGCCA 1 cut(s) 42
MseI TTAA 5 cut(s) 519, 705, 884, 1182, 1269
Msp20I TGGCCA 1 cut(s) 42
MspCI CTTAAG 1 cut(s) 1268
MspI CCGG 1 cut(s) 21
MspR9I CCNGG 1 cut(s) 878
MvaI CCWGG 1 cut(s) 878
MvnI CGCG 3 cut(s) 431, 925, 927
MwoI GCNNNNNNNGC 1 cut(s) 471
NdeII GATC 4 cut(s) 202, 847, 892, 1186
NlaIII CATG 6 cut(s) 129, 441, 457, 749, 1048, 1142
NlaIV GGNNCC 2 cut(s) 793, 794
NmuCI GTSAC 1 cut(s) 1110
NsiI ATGCAT 2 cut(s) 273, 322
PagI TCATGA 3 cut(s) 745, 1044, 1138
PfeI GAWTC 5 cut(s) 70, 620, 742, 1067, 1201
PflFI GACNNNGTC 1 cut(s) 1132
PflMI CCANNNNNTGG 1 cut(s) 820
PkrI GCNGC 4 cut(s) 104, 247, 467, 924
PleI GAGTC 3 cut(s) 236, 839, 929
PpsI GAGTC 3 cut(s) 236, 839, 929
Ppu21I YACGTR 1 cut(s) 754
PpuMI RGGWCCY 1 cut(s) 792
PshAI GACNNNNGTC 1 cut(s) 830
Psp124BI GAGCTC 1 cut(s) 414
Psp5II RGGWCCY 1 cut(s) 792
Psp6I CCWGG 1 cut(s) 876
PspFI CCCAGC 1 cut(s) 523
PspGI CCWGG 1 cut(s) 876
PspN4I GGNNCC 2 cut(s) 793, 794
PspPI GGNCC 2 cut(s) 18, 792
PspPPI RGGWCCY 1 cut(s) 792
PsyI GACNNNGTC 1 cut(s) 1132
RsaI GTAC 3 cut(s) 176, 752, 1175
RsaNI GTAC 3 cut(s) 175, 751, 1174
SacI GAGCTC 1 cut(s) 414
SaqAI TTAA 5 cut(s) 519, 705, 884, 1182, 1269
SatI GCNGC 4 cut(s) 103, 246, 466, 923
Sau3AI GATC 4 cut(s) 202, 847, 892, 1186
Sau96I GGNCC 2 cut(s) 18, 792
SchI GAGTC 3 cut(s) 237, 840, 929
ScrFI CCNGG 1 cut(s) 878
SduI GDGCHC 1 cut(s) 414
SfaNI GCATC 5 cut(s) 173, 232, 280, 307, 329
SfcI CTRYAG 1 cut(s) 661
SinI GGWCC 2 cut(s) 18, 792
SmlI CTYRAG 1 cut(s) 1268
SmoI CTYRAG 1 cut(s) 1268
SnaBI TACGTA 1 cut(s) 754
Sse9I AATT 5 cut(s) 385, 727, 912, 1177, 1218
SsiI CCGC 5 cut(s) 10, 103, 246, 503, 923
SspMI CTAG 1 cut(s) 1077
SstI GAGCTC 1 cut(s) 414
StyD4I CCNGG 1 cut(s) 876
TaaI ACNGT 2 cut(s) 353, 643
TaiI ACGT 3 cut(s) 491, 603, 756
TaqI TCGA 6 cut(s) 363, 576, 781, 907, 933, 943
TasI AATT 5 cut(s) 385, 727, 912, 1177, 1218
TatI WGTACW 2 cut(s) 174, 1173
TauI GCSGC 3 cut(s) 105, 248, 925
TfiI GAWTC 5 cut(s) 70, 620, 742, 1067, 1201
Tru1I TTAA 5 cut(s) 519, 705, 884, 1182, 1269
Tru9I TTAA 5 cut(s) 519, 705, 884, 1182, 1269
TscAI CASTG 2 cut(s) 93, 924
TseFI GTSAC 1 cut(s) 1110
TseI GCWGC 1 cut(s) 465
Tsp45I GTSAC 1 cut(s) 1110
TspDTI ATGAA 5 cut(s) 702, 734, 846, 941, 1061
TspGWI ACGGA 2 cut(s) 422, 665
TspRI CASTG 2 cut(s) 93, 924
Tth111I GACNNNGTC 1 cut(s) 1132
Van91I CCANNNNNTGG 1 cut(s) 820
Vha464I CTTAAG 1 cut(s) 1268
VpaK11BI GGWCC 2 cut(s) 18, 792
XapI RAATTY 1 cut(s) 912
XmiI GTMKAC 2 cut(s) 660, 713
XspI CTAG 1 cut(s) 1077
Zsp2I ATGCAT 2 cut(s) 273, 322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.