MD02G1063100.v1.1

ADP-ribosylation factor GTPase-activating protein AGD14

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0006003
Physical Location & Seq
Forward (+)
5050267 .. 5058003
7737 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1063100.v1.1.491

Sequence Viewer

Length: 2145 bp
ATGAAATTCTATGTGAGAATGGCAAGTCGAAAGGAAGACGAGAAAAATGAACGAATTATTCGTGGCCTTCTTAAACTTCCTGAGAATCGCAGATGCATCAACTGCAACAGTCTGGGGCCACAGTATGTTTGCACAAATTTCTGGACATTTGTTTGCACAAACTGCAGTGGAATACACCGAGAGTTCACACACCGTGTAAAATCAGTATCAATGGCCAAATTTACTTCACAAGAAGTCAGTGCCCTTCAAGAAGGGGGAAATCAGCGTGCAAAGGAAATTTATCATAAAGAATTGGACCCGCAACGTAACTCCTATCCTGACAGCAGTAATGTCGAGAGGCTTCGAGACTTTATTAAGCATGTGTATGTGGATAGAAGATATACTGGTGAGAGAAACTTGGACAAGCCTCCAAAGGGGAAAATGGGTGAGAAAGAAGATTCCTATGACAACAGAAGAGTGGATTCATACCAGGGTGGCTCTCGAAGCCCACCATATGATGATAAATATGAGCGTCGTTACAGTGATAGGTCTAGTCCTGGTGCAAGAAGTTATGATGGGCAAAGAAGTCCGGGATATGATCAAGAAAGTCGTCAGTCTAGTGATTATAGGAGAAGTCCTGGTCGCCCTGAGATTGTGAATGATTGGCGTCGAGAAGATAGATTTGGAAATGGGAGTCGAAATGATGATCGTAGAATATCTGATGGAGATTCTAAAGTGGAAGGAAGATCACCTGAACGACCAGGAGATCTAAATTCGTCAAGTCCCCCTATTGTACGGCCTGTTAGAGAGATTTTGGGGGAGAACACAGTACCTCTCCGTATAATTGAACCTCCAAAAGCTAACAGTGCTAGAGCTACTGATAGCTCTGTGCAGCATACACAGAGAAGTGTGTCGTCCAGCAGCTTGGCCTCCTCCAATGGGAACCCAGTGGAAGTGAAGCTGGAGACTTCAAGTTTAATTGATTTTGATGCTGATATCAAACCTGCTCCAGCTGTTGTAGTTCCTCAAGCACAACAAACTACTGTAGCTCAAACCTACCCACAGCCTGCAAATTCAACCAATGACAACAATTGGGCCTCTTTTGATGTTACTCCAGCAGTGAAAGCACCTCAAGCTCCTGCGAATGTGAATTCATTAGAATCTCTGCTATCACAATTGTCAGTTTCAGCACCTGTCCCTAGCAATGTTTCTGGGACTGCAGGTAATATTGGTGCCCCCACAGTTGCACCAGTAAACAGCTTGTCAACATTTCCCCCTGTTGCTGCTCCAGTTCCTGCCCCTGGATCTCAAGCATTCCCAGTAAATGGTGGTAATTTCCATGTTAAAGATCCTGCTTCCGGGCAATGGCCTACCATGCAGCACCAACAACCTTCTTTATACCCTGGTACTGGGGTTCAGTCTGCTGGACAACAATATATGCCTTCCATTGTTGGAACTTCGACTGTTGCATCACAATTGTCAGCTGGGGAAGCAAAATCTACTGGAAGAAGAGAACTTCCTGCGGATATTTTTGCAATGAACTATTCATCTTTTCCCGCACCAGTTCCTGGATGGCAAACTGGTCCTCCTCGTGGTATGGGGTTTCCTATGCCATATAACACTGCGGTGCCCATGCCCAGTTTTCAGCAGTCTTCAAAGTCAGCAAACCCATTTGATGTAAACAGTGAACCTCCAATACAATCCTCAGCGTTTCCTTCCTTGCAAGCTCCCCTACCAAATGCCCAGACTTTATCCCCATCAGGTTTAATGCGCACGTCCAGCCTTGGTACTCCCTCATCAGCATGGATGCCCCTCCAGTCATCACCATATTCATCAGCGGTTCCTCCCCAAGCACCACAATATGCATCCCAAGTGCCTCCCCAAGCACCACAATATGCATCACAAATGCCTTCCCAAGCACCGCCGTATACATCACACGTGCCTCCCCAGCCACCACAATATGCATCACAAATGCCACCAAGGCCCTACATGGTGCAACAACTTCCGAGCAGCGTGCCACCTCCCGGGTATCAAGGGGCAGGAGGCTTTGGCACCGGCGGGGCTTCTTTTGGTTCGTTAAATGTGGATCAACAGCTGGCAGGTAGATTCTCAGCGCCTGCTACCCCAAATCCATTCCCTTCAGCCGGAGGAAATCCATTTGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArfGap

Protein Analysis

715

Amino Acids

77.22

Weight (kDa)

9.01

Isoelectric Point (pI)

75.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArfGap PF01412 18 - 128 5.9e-30 Putative GTPase activating protein for Arf
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1751
Acc36I ACCTGC 3 cut(s) 991, 1190, 2069
AccB1I GGYRCC 3 cut(s) 1211, 1606, 2030
AccB7I CCANNNNNTGG 2 cut(s) 1304, 1547
AccI GTMKAC 1 cut(s) 1907
AciI CCGC 7 cut(s) 299, 1502, 1536, 1604, 1817, 1901, 2037
AclWI GGATC 3 cut(s) 1291, 1322, 2073
AcoI YGGCCR 1 cut(s) 213
AcsI RAATTY 7 cut(s) 5, 136, 218, 276, 751, 1051, 1129
AcuI CTGAAG 1 cut(s) 2103
AcvI CACGTG 1 cut(s) 1918
AcyI GRCGYC 1 cut(s) 646
AdeI CACNNNGTG 1 cut(s) 194
AfaI GTAC 4 cut(s) 774, 810, 1387, 1768
AflIII ACRYGT 1 cut(s) 1915
AgsI TTSAA 5 cut(s) 248, 827, 951, 1056, 1635
AjiI CACGTC 1 cut(s) 1755
AjnI CCWGG 7 cut(s) 468, 535, 616, 739, 1279, 1381, 1546
AjuI GAANNNNNNNTTGG 2 cut(s) 645, 677
AleI CACNNNNGTG 1 cut(s) 1604
Alw26I GTCTC 2 cut(s) 339, 938
AlwI GGATC 3 cut(s) 1291, 1322, 2073
AlwNI CAGNNNCTG 4 cut(s) 1172, 1274, 1547, 2096
Ama87I CYCGRG 1 cut(s) 2003
AoxI GGCC 8 cut(s) 64, 116, 213, 776, 906, 1074, 1346, 1961
ApeKI GCWGC 5 cut(s) 871, 900, 1262, 1357, 1989
ApoI RAATTY 7 cut(s) 5, 136, 218, 276, 751, 1051, 1129
AspLEI GCGC 2 cut(s) 1752, 2095
AspS9I GGNCC 5 cut(s) 116, 295, 1074, 1562, 1962
AsuC2I CCSGG 4 cut(s) 570, 1339, 2004, 2005
AsuHPI GGTGA 4 cut(s) 398, 437, 720, 1794
AvaI CYCGRG 1 cut(s) 2003
AvaII GGWCC 2 cut(s) 295, 1562
BaeGI GKGCMC 3 cut(s) 244, 1216, 1611
BaeI ACNNNNGTAYC 2 cut(s) 1377, 1410
BalI TGGCCA 1 cut(s) 215
BanI GGYRCC 3 cut(s) 1211, 1606, 2030
BauI CACGAG 1 cut(s) 1569
BbrPI CACGTG 1 cut(s) 1918
BbsI GAAGAC 2 cut(s) 42, 1623
BbvCI CCTCAGC 1 cut(s) 1684
BbvI GCAGC 5 cut(s) 883, 912, 1249, 1369, 2001
BccI CCATC 4 cut(s) 548, 695, 1545, 1744
BceAI ACGGC 2 cut(s) 791, 1888
BcgI CGANNNNNNTGC 4 cut(s) 313, 347, 1975, 2009
BciT130I CCWGG 7 cut(s) 470, 537, 618, 741, 1281, 1383, 1548
BclI TGATCA 1 cut(s) 577
BcnI CCSGG 4 cut(s) 570, 1339, 2004, 2005
BcoDI GTCTC 2 cut(s) 339, 938
BfaI CTAG 4 cut(s) 531, 597, 849, 1179
BfmI CTRYAG 3 cut(s) 163, 1023, 1197
BfoI RGCGCY 1 cut(s) 2096
BfuAI ACCTGC 3 cut(s) 991, 1190, 2069
BglI GCCNNNNNGGC 1 cut(s) 1960
BglII AGATCT 1 cut(s) 745
BisI GCNGC 5 cut(s) 872, 901, 1263, 1358, 1990
BlsI GCNGC 5 cut(s) 873, 902, 1264, 1359, 1991
Bme18I GGWCC 2 cut(s) 295, 1562
BmeT110I CYCGRG 1 cut(s) 2003
BmgBI CACGTC 1 cut(s) 1755
BmgT120I GGNCC 5 cut(s) 116, 295, 1074, 1562, 1962
BmiI GGNNCC 7 cut(s) 117, 297, 923, 1213, 1608, 1821, 2032
BmrI ACTGGG 4 cut(s) 920, 1292, 1398, 1611
BmsI GCATC 8 cut(s) 83, 105, 958, 1457, 1776, 1853, 1886, 1952
BmuI ACTGGG 4 cut(s) 920, 1292, 1398, 1611
BpiI GAAGAC 2 cut(s) 42, 1623
BpmI CTGGAG 5 cut(s) 962, 972, 1077, 1251, 1778
Bpu10I CCTNAGC 1 cut(s) 1684
BpuEI CTTGAG 3 cut(s) 990, 1095, 1272
BpuMI CCSGG 4 cut(s) 570, 1339, 2004, 2005
BsaAI YACGTR 1 cut(s) 1918
BsaHI GRCGYC 1 cut(s) 646
BsaJI CCNNGG 6 cut(s) 469, 1279, 1381, 1762, 1958, 2003
BsaXI ACNNNNNCTCC 2 cut(s) 1549, 1579
Bse118I RCCGGY 1 cut(s) 2033
Bse3DI GCAATG 3 cut(s) 1189, 1349, 1521
BseBI CCWGG 7 cut(s) 470, 537, 618, 741, 1281, 1383, 1548
BseDI CCNNGG 6 cut(s) 469, 1279, 1381, 1762, 1958, 2003
BseGI GGATG 3 cut(s) 1556, 1791, 1844
BseMI GCAATG 3 cut(s) 1189, 1349, 1521
BseMII CTCAG 4 cut(s) 72, 618, 1698, 2103
BseRI GAGGAG 2 cut(s) 901, 1557
BseSI GKGCMC 3 cut(s) 244, 1216, 1611
BseXI GCAGC 5 cut(s) 883, 912, 1249, 1369, 2001
BseYI CCCAGC 2 cut(s) 1463, 1926
BsgI GTGCAG 1 cut(s) 890
BshFI GGCC 8 cut(s) 66, 118, 215, 778, 908, 1076, 1348, 1963
BshNI GGYRCC 3 cut(s) 1211, 1606, 2030
BsiHKCI CYCGRG 1 cut(s) 2003
BsiSI CCGG 5 cut(s) 569, 1338, 2004, 2034, 2124
BslFI GGGAC 3 cut(s) 747, 1160, 1207
BsmAI GTCTC 2 cut(s) 339, 938
BsmFI GGGAC 3 cut(s) 747, 1160, 1207
BsmI GAATGC 1 cut(s) 1292
BsnI GGCC 8 cut(s) 66, 118, 215, 778, 908, 1076, 1348, 1963
BsoBI CYCGRG 1 cut(s) 2003
Bsp1286I GDGCHC 3 cut(s) 244, 1216, 1611
Bsp143I GATC 7 cut(s) 577, 685, 725, 745, 1283, 1327, 2065
BspACI CCGC 7 cut(s) 299, 1502, 1536, 1604, 1817, 1901, 2037
BspANI GGCC 8 cut(s) 66, 118, 215, 778, 908, 1076, 1348, 1963
BspCNI CTCAG 4 cut(s) 73, 619, 1697, 2102
BspLI GGNNCC 7 cut(s) 117, 297, 923, 1213, 1608, 1821, 2032
BspMAI CTGCAG 2 cut(s) 167, 1201
BspMI ACCTGC 3 cut(s) 991, 1190, 2069
BspPI GGATC 3 cut(s) 1291, 1322, 2073
BspT107I GGYRCC 3 cut(s) 1211, 1606, 2030
BsrDI GCAATG 3 cut(s) 1189, 1349, 1521
BsrFI RCCGGY 1 cut(s) 2033
BssAI RCCGGY 1 cut(s) 2033
BssECI CCNNGG 6 cut(s) 469, 1279, 1381, 1762, 1958, 2003
BssMI GATC 7 cut(s) 577, 685, 725, 745, 1283, 1327, 2065
BssNAI GTATAC 1 cut(s) 1908
BssNI GRCGYC 1 cut(s) 646
BssSI CACGAG 1 cut(s) 1569
BssT1I CCWWGG 2 cut(s) 1762, 1958
Bst1107I GTATAC 1 cut(s) 1908
Bst2BI CACGAG 1 cut(s) 1569
Bst2UI CCWGG 7 cut(s) 470, 537, 618, 741, 1281, 1383, 1548
Bst6I CTCTTC 2 cut(s) 448, 1483
BstACI GRCGYC 1 cut(s) 646
BstAPI GCANNNNNTGC 2 cut(s) 102, 162
BstBAI YACGTR 1 cut(s) 1918
BstC8I GCNNGC 6 cut(s) 267, 1047, 1704, 1994, 2076, 2097
BstDEI CTNAG 4 cut(s) 81, 627, 1684, 2089
BstF5I GGATG 3 cut(s) 1556, 1791, 1844
BstH2I RGCGCY 1 cut(s) 2096
BstHHI GCGC 2 cut(s) 1752, 2095
BstKTI GATC 7 cut(s) 580, 688, 728, 748, 1286, 1330, 2068
BstMAI GTCTC 2 cut(s) 339, 938
BstMBI GATC 7 cut(s) 577, 685, 725, 745, 1283, 1327, 2065
BstNI CCWGG 7 cut(s) 470, 537, 618, 741, 1281, 1383, 1548
BstNSI RCATGY 1 cut(s) 362
BstSFI CTRYAG 3 cut(s) 163, 1023, 1197
BstSLI GKGCMC 3 cut(s) 244, 1216, 1611
BstV1I GCAGC 5 cut(s) 883, 912, 1249, 1369, 2001
BstV2I GAAGAC 2 cut(s) 42, 1623
BstX2I RGATCY 3 cut(s) 745, 1283, 1327
BstXI CCANNNNNNTGG 1 cut(s) 904
BstYI RGATCY 3 cut(s) 745, 1283, 1327
BstZ17I GTATAC 1 cut(s) 1908
BsuRI GGCC 8 cut(s) 66, 118, 215, 778, 908, 1076, 1348, 1963
BtrI CACGTC 1 cut(s) 1755
BtsCI GGATG 3 cut(s) 1556, 1791, 1844
BtsI GCAGTG 3 cut(s) 172, 1104, 1599
BtsIMutI CAGTG 8 cut(s) 172, 244, 526, 850, 933, 1104, 1599, 1669
BveI ACCTGC 3 cut(s) 991, 1190, 2069
Cac8I GCNNGC 6 cut(s) 267, 1047, 1704, 1994, 2076, 2097
CaiI CAGNNNCTG 4 cut(s) 1172, 1274, 1547, 2096
CfoI GCGC 2 cut(s) 1752, 2095
Cfr10I RCCGGY 1 cut(s) 2033
Cfr13I GGNCC 5 cut(s) 116, 295, 1074, 1562, 1962
Cfr9I CCCGGG 1 cut(s) 2003
CseI GACGC 2 cut(s) 500, 635
Csp6I GTAC 4 cut(s) 773, 809, 1386, 1767
CviAII CATG 6 cut(s) 359, 1319, 1354, 1612, 1782, 1969
CviQI GTAC 4 cut(s) 773, 809, 1386, 1767
DdeI CTNAG 4 cut(s) 81, 627, 1684, 2089
DpnI GATC 7 cut(s) 579, 687, 727, 747, 1285, 1329, 2067
DpnII GATC 7 cut(s) 577, 685, 725, 745, 1283, 1327, 2065
DraIII CACNNNGTG 1 cut(s) 194
EaeI YGGCCR 1 cut(s) 213
Eam1104I CTCTTC 2 cut(s) 448, 1483
EarI CTCTTC 2 cut(s) 448, 1483
Eco130I CCWWGG 2 cut(s) 1762, 1958
Eco32I GATATC 1 cut(s) 976
Eco47I GGWCC 2 cut(s) 295, 1562
Eco57I CTGAAG 1 cut(s) 2103
Eco72I CACGTG 1 cut(s) 1918
Eco88I CYCGRG 1 cut(s) 2003
EcoO109I RGGNCCY 1 cut(s) 1962
EcoRI GAATTC 1 cut(s) 1129
EcoRII CCWGG 7 cut(s) 468, 535, 616, 739, 1279, 1381, 1546
EcoRV GATATC 1 cut(s) 976
EcoT14I CCWWGG 2 cut(s) 1762, 1958
EcoT22I ATGCAT 4 cut(s) 98, 1846, 1879, 1945
ErhI CCWWGG 2 cut(s) 1762, 1958
FaeI CATG 6 cut(s) 362, 1322, 1357, 1615, 1785, 1972
FaqI GGGAC 3 cut(s) 747, 1160, 1207
FatI CATG 6 cut(s) 358, 1318, 1353, 1611, 1781, 1968
FauI CCCGC 3 cut(s) 306, 1543, 2030
FauNDI CATATG 1 cut(s) 493
FbaI TGATCA 1 cut(s) 577
FblI GTMKAC 1 cut(s) 1907
Fnu4HI GCNGC 5 cut(s) 872, 901, 1263, 1358, 1990
FokI GGATG 3 cut(s) 1563, 1798, 1831
Fsp4HI GCNGC 5 cut(s) 872, 901, 1263, 1358, 1990
FspAI RTGCGCAY 1 cut(s) 1751
FspBI CTAG 4 cut(s) 531, 597, 849, 1179
FspI TGCGCA 1 cut(s) 1751
GlaI GCGC 2 cut(s) 1751, 2094
GluI GCNGC 5 cut(s) 872, 901, 1263, 1358, 1990
GsaI CCCAGC 2 cut(s) 1467, 1930
GsuI CTGGAG 5 cut(s) 962, 972, 1077, 1251, 1778
HaeII RGCGCY 1 cut(s) 2096
HaeIII GGCC 8 cut(s) 66, 118, 215, 778, 908, 1076, 1348, 1963
HapII CCGG 5 cut(s) 569, 1338, 2004, 2034, 2124
HgaI GACGC 2 cut(s) 500, 635
HhaI GCGC 2 cut(s) 1752, 2095
Hin1I GRCGYC 1 cut(s) 646
Hin1II CATG 6 cut(s) 362, 1322, 1357, 1615, 1785, 1972
Hin6I GCGC 2 cut(s) 1750, 2093
HinP1I GCGC 2 cut(s) 1750, 2093
HincII GTYRAC 1 cut(s) 1245
HindII GTYRAC 1 cut(s) 1245
HinfI GANTC 7 cut(s) 85, 437, 461, 673, 707, 1139, 2085
HpaII CCGG 5 cut(s) 569, 1338, 2004, 2034, 2124
HphI GGTGA 4 cut(s) 398, 437, 720, 1794
Hpy166II GTNNAC 6 cut(s) 186, 1234, 1245, 1660, 1667, 1908
Hpy188I TCNGA 2 cut(s) 700, 1986
Hpy188III TCNNGA 9 cut(s) 80, 142, 248, 317, 334, 344, 480, 581, 650
Hpy8I GTNNAC 6 cut(s) 186, 1234, 1245, 1660, 1667, 1908
Hpy99I CGWCG 2 cut(s) 516, 651
HpyAV CCTTC 9 cut(s) 77, 245, 254, 713, 1380, 1431, 1704, 1899, 2127
HpyCH4IV ACGT 3 cut(s) 304, 1754, 1917
HpyF3I CTNAG 4 cut(s) 81, 627, 1684, 2089
HpySE526I ACGT 3 cut(s) 304, 1754, 1917
Hsp92I GRCGYC 1 cut(s) 646
Hsp92II CATG 6 cut(s) 362, 1322, 1357, 1615, 1785, 1972
HspAI GCGC 2 cut(s) 1750, 2093
Ksp22I TGATCA 1 cut(s) 577
Kzo9I GATC 7 cut(s) 577, 685, 725, 745, 1283, 1327, 2065
LmnI GCTCC 4 cut(s) 991, 1120, 1270, 1711
Lsp1109I GCAGC 5 cut(s) 883, 912, 1249, 1369, 2001
LweI GCATC 8 cut(s) 83, 105, 958, 1457, 1776, 1853, 1886, 1952
MaeI CTAG 4 cut(s) 531, 597, 849, 1179
MaeII ACGT 3 cut(s) 304, 1754, 1917
MaeIII GTNAC 3 cut(s) 305, 515, 1087
MalI GATC 7 cut(s) 579, 687, 727, 747, 1285, 1329, 2067
MboI GATC 7 cut(s) 577, 685, 725, 745, 1283, 1327, 2065
MboII GAAGA 9 cut(s) 47, 387, 446, 465, 665, 735, 1497, 1500, 1623
MfeI CAATTG 3 cut(s) 1069, 1154, 1454
MflI RGATCY 3 cut(s) 745, 1283, 1327
MhlI GDGCHC 3 cut(s) 244, 1216, 1611
MlsI TGGCCA 1 cut(s) 215
MluNI TGGCCA 1 cut(s) 215
MlyI GAGTC 1 cut(s) 682
MmeI TCCRAC 1 cut(s) 1411
Mox20I TGGCCA 1 cut(s) 215
Mph1103I ATGCAT 4 cut(s) 98, 1846, 1879, 1945
MscI TGGCCA 1 cut(s) 215
MseI TTAA 6 cut(s) 72, 354, 956, 1323, 1745, 2057
MslI CAYNNNNRTG 3 cut(s) 363, 1604, 1780
Msp20I TGGCCA 1 cut(s) 215
MspA1I CMGCKG 4 cut(s) 992, 1463, 1817, 2074
MspI CCGG 5 cut(s) 569, 1338, 2004, 2034, 2124
MunI CAATTG 3 cut(s) 1069, 1154, 1454
Mva1269I GAATGC 1 cut(s) 1292
MvaI CCWGG 7 cut(s) 470, 537, 618, 741, 1281, 1383, 1548
NciI CCSGG 4 cut(s) 570, 1339, 2004, 2005
NdeI CATATG 1 cut(s) 493
NdeII GATC 7 cut(s) 577, 685, 725, 745, 1283, 1327, 2065
NlaIII CATG 6 cut(s) 362, 1322, 1357, 1615, 1785, 1972
NlaIV GGNNCC 7 cut(s) 117, 297, 923, 1213, 1608, 1821, 2032
NsbI TGCGCA 1 cut(s) 1751
NsiI ATGCAT 4 cut(s) 98, 1846, 1879, 1945
NspI RCATGY 1 cut(s) 362
OliI CACNNNNGTG 1 cut(s) 1604
PcsI WCGNNNNNNNCGW 1 cut(s) 58
PctI GAATGC 1 cut(s) 1292
PfeI GAWTC 6 cut(s) 85, 437, 461, 707, 1139, 2085
PflMI CCANNNNNTGG 2 cut(s) 1304, 1547
PfoI TCCNGGA 2 cut(s) 568, 1546
PkrI GCNGC 5 cut(s) 873, 902, 1264, 1359, 1991
PleI GAGTC 1 cut(s) 681
PmaCI CACGTG 1 cut(s) 1918
PmlI CACGTG 1 cut(s) 1918
PpsI GAGTC 1 cut(s) 681
Ppu21I YACGTR 1 cut(s) 1918
Psp6I CCWGG 7 cut(s) 468, 535, 616, 739, 1279, 1381, 1546
PspCI CACGTG 1 cut(s) 1918
PspFI CCCAGC 2 cut(s) 1463, 1926
PspGI CCWGG 7 cut(s) 468, 535, 616, 739, 1279, 1381, 1546
PspN4I GGNNCC 7 cut(s) 117, 297, 923, 1213, 1608, 1821, 2032
PspPI GGNCC 5 cut(s) 116, 295, 1074, 1562, 1962
PsrI GAACNNNNNNTAC 2 cut(s) 1659, 1691
PstI CTGCAG 2 cut(s) 167, 1201
PstNI CAGNNNCTG 4 cut(s) 1172, 1274, 1547, 2096
PsuI RGATCY 3 cut(s) 745, 1283, 1327
PvuII CAGCTG 3 cut(s) 992, 1463, 2074
RsaI GTAC 4 cut(s) 774, 810, 1387, 1768
RsaNI GTAC 4 cut(s) 773, 809, 1386, 1767
RseI CAYNNNNRTG 3 cut(s) 363, 1604, 1780
SaqAI TTAA 6 cut(s) 72, 354, 956, 1323, 1745, 2057
SatI GCNGC 5 cut(s) 872, 901, 1263, 1358, 1990
Sau3AI GATC 7 cut(s) 577, 685, 725, 745, 1283, 1327, 2065
Sau96I GGNCC 5 cut(s) 116, 295, 1074, 1562, 1962
SchI GAGTC 1 cut(s) 682
SduI GDGCHC 3 cut(s) 244, 1216, 1611
SfaNI GCATC 8 cut(s) 83, 105, 958, 1457, 1776, 1853, 1886, 1952
SfcI CTRYAG 3 cut(s) 163, 1023, 1197
SgrAI CRCCGGYG 1 cut(s) 2033
SinI GGWCC 2 cut(s) 295, 1562
SmaI CCCGGG 1 cut(s) 2005
SmiMI CAYNNNNRTG 3 cut(s) 363, 1604, 1780
SmlI CTYRAG 3 cut(s) 1005, 1110, 1287
SmoI CTYRAG 3 cut(s) 1005, 1110, 1287
SsiI CCGC 7 cut(s) 299, 1502, 1536, 1604, 1817, 1901, 2037
SspI AATATT 1 cut(s) 1207
SspMI CTAG 4 cut(s) 531, 597, 849, 1179
StyI CCWWGG 2 cut(s) 1762, 1958
TaiI ACGT 3 cut(s) 307, 1757, 1920
TaqI TCGA 7 cut(s) 28, 333, 343, 481, 649, 676, 1439
TfiI GAWTC 6 cut(s) 85, 437, 461, 707, 1139, 2085
Tru1I TTAA 6 cut(s) 72, 354, 956, 1323, 1745, 2057
Tru9I TTAA 6 cut(s) 72, 354, 956, 1323, 1745, 2057
TscAI CASTG 8 cut(s) 172, 244, 526, 850, 933, 1104, 1606, 1669
TseI GCWGC 5 cut(s) 871, 900, 1262, 1357, 1989
TspDTI ATGAA 7 cut(s) 17, 63, 453, 1122, 1515, 1532, 1800
TspGWI ACGGA 1 cut(s) 806
TspMI CCCGGG 1 cut(s) 2003
TspRI CASTG 8 cut(s) 172, 244, 526, 850, 933, 1104, 1606, 1669
Van91I CCANNNNNTGG 2 cut(s) 1304, 1547
VpaK11BI GGWCC 2 cut(s) 295, 1562
XapI RAATTY 7 cut(s) 5, 136, 218, 276, 751, 1051, 1129
XceI RCATGY 1 cut(s) 362
XcmI CCANNNNNNNNNTGG 1 cut(s) 1548
XmaI CCCGGG 1 cut(s) 2003
XmiI GTMKAC 1 cut(s) 1907
XspI CTAG 4 cut(s) 531, 597, 849, 1179
Zsp2I ATGCAT 4 cut(s) 98, 1846, 1879, 1945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.