Rmu_sc0000792.1_g000020

ADP-ribosylation factor GTPase-activating protein AGD14

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000792.1
Physical Location & Seq
Reverse (-)
100436 .. 104364
3929 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000792.1_g000020.1.cds

Sequence Viewer

Length: 1461 bp
atggtacgacctgttagagatattttgggggataagacaatacctctccgtattattgaacctcccaaagccaacaatgttaggcctactgaaggttccgtgcttacacagagaactgcttcttccagcagcttgggttccaccaatgggaacccagttgaagtgaaagtggagacttctggaagtttaattgattttgatgccaatattgaacctgctccaactctagcagttcctcaagcacaacaaacttctgtaactcaatcatattcacagccagaacattcacacagtgacaacaactgggcctcttttgatgttgctccacaagtgaaagtatctcaagctcctgcaaatgcaaattctttggaatctctactatcagagttgtctgtttcagcacctgtccctagttattctggaactgcagataatactggggcttttacagctgcaggtaacatgactgcaccattcagtggtaattcagtcatcactccagtaggacacacaatgttgccgactgcttctcatacagttgcaccgatttcgagcttgtcaacatttccccctgttggtgctccagttgcactccctggattggctcaaacattccctgccaatgctagtaatttccctgctaccggttctgggcaatggcctagtatgcagcatcagcagccttctttatttcctgctaatggtattcagtctgcctctcaacaatacataccatcagttggtggagcttcaagcaatcaaccatggaatttagcacatgccccaaatgcacaaggtcaacctagctatccagctgcacaagcaccacaagatgtttcaagatctaccaacaatgttagtactgttgcatcacaaaattcggctggggatgtaaaatcaattggaagaactgcacttcctgaggatctttttgcgatgaactattcatccttccctgcaccagttcctggatggcaaactggtcctcctcagggtatggggtttgctatgccatacaacactgcagtgcccatgcccagttttcagcagtcgttaaagtcagcaaacccgtttgatgtcagtagtggacctcctccagttcaagcctcagcatttccttccactgtatcctcacaaggaccgctaccaaatatgcagcctccatctggcttattgcgtacggctagccttgggacaccctcatcagcttgggggccctcatattcatctggattgcctctccaagcaccaccatatgcatcacaaatgcctccaagtgcctatgcagtgcaacaaattccgagtagcttgccaccttcagggtatcaaggagcagggggctttcgtgctgagggagctgcttttggttcattaaatatggatcaacagccggttggtagattctcagcacctgctaccccaaatcctttcccgtctacaggaggaaacccatttggatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

486

Amino Acids

49.84

Weight (kDa)

5.45

Isoelectric Point (pI)

61.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1420
Acc36I ACCTGC 3 cut(s) 223, 446, 1420
AccB7I CCANNNNNTGG 3 cut(s) 479, 740, 968
AccI GTMKAC 1 cut(s) 1436
AciI CCGC 1 cut(s) 1142
AclWI GGATC 2 cut(s) 933, 1389
AcsI RAATTY 4 cut(s) 361, 769, 877, 1296
AcuI CTGAAG 2 cut(s) 111, 1302
AdeI CACNNNGTG 1 cut(s) 293
AfaI GTAC 3 cut(s) 6, 862, 1180
AgeI ACCGGT 1 cut(s) 644
AgsI TTSAA 6 cut(s) 59, 161, 212, 753, 840, 1103
AjnI CCWGG 2 cut(s) 595, 967
AleI CACNNNNGTG 1 cut(s) 1025
AloI GAACNNNNNNTCC 4 cut(s) 901, 932, 933, 964
Alw21I GWGCWC 1 cut(s) 583
Alw26I GTCTC 1 cut(s) 167
AlwI GGATC 2 cut(s) 933, 1389
AlwNI CAGNNNCTG 3 cut(s) 404, 968, 1412
AoxI GGCC 4 cut(s) 83, 306, 659, 1214
ApaI GGGCCC 1 cut(s) 1218
ApeKI GCWGC 7 cut(s) 129, 452, 670, 679, 815, 1156, 1358
ApoI RAATTY 4 cut(s) 361, 769, 877, 1296
AsiGI ACCGGT 1 cut(s) 644
Asp700I GAANNNNTTC 1 cut(s) 118
AspS9I GGNCC 6 cut(s) 306, 983, 1088, 1139, 1214, 1215
AsuNHI GCTAGC 1 cut(s) 1184
AvaII GGWCC 3 cut(s) 983, 1088, 1139
AxyI CCTNAGG 2 cut(s) 921, 990
BaeGI GKGCMC 2 cut(s) 1032, 1218
BanII GRGCYC 1 cut(s) 1218
Bbv12I GWGCWC 1 cut(s) 583
BbvCI CCTCAGC 2 cut(s) 1108, 1350
BbvI GCAGC 7 cut(s) 141, 439, 682, 691, 802, 1168, 1345
BccI CCATC 3 cut(s) 742, 966, 1171
BceAI ACGGC 1 cut(s) 1197
BcgI CGANNNNNNTGC 4 cut(s) 531, 565, 1291, 1325
BciT130I CCWGG 2 cut(s) 597, 969
BciVI GTATCC 1 cut(s) 1138
BcoDI GTCTC 1 cut(s) 167
BfaI CTAG 6 cut(s) 227, 411, 627, 663, 804, 1185
BfmI CTRYAG 4 cut(s) 426, 453, 1023, 1437
BfuAI ACCTGC 3 cut(s) 223, 446, 1420
BfuI GTATCC 1 cut(s) 1138
BglII AGATCT 1 cut(s) 842
BisI GCNGC 7 cut(s) 130, 453, 671, 680, 816, 1157, 1359
BlsI GCNGC 7 cut(s) 131, 454, 672, 681, 817, 1158, 1360
BmcAI AGTACT 1 cut(s) 862
Bme1390I CCNGG 2 cut(s) 597, 969
Bme18I GGWCC 3 cut(s) 983, 1088, 1139
BmgT120I GGNCC 6 cut(s) 306, 983, 1088, 1139, 1214, 1215
BmiI GGNNCC 5 cut(s) 97, 139, 152, 1215, 1216
BmrFI CCNGG 2 cut(s) 597, 969
BmrI ACTGGG 4 cut(s) 149, 313, 447, 1032
BmsI GCATC 4 cut(s) 190, 682, 878, 1268
BmtI GCTAGC 1 cut(s) 1188
BmuI ACTGGG 4 cut(s) 149, 313, 447, 1032
BpmI CTGGAG 3 cut(s) 483, 567, 1080
Bpu10I CCTNAGC 2 cut(s) 1108, 1350
BpuEI CTTGAG 2 cut(s) 222, 327
BsaJI CCNNGG 3 cut(s) 595, 764, 1189
BsaWI WCCGGW 1 cut(s) 644
BsaXI ACNNNNNCTCC 2 cut(s) 970, 1000
Bse118I RCCGGY 2 cut(s) 644, 1390
Bse1I ACTGG 9 cut(s) 155, 308, 442, 500, 584, 962, 985, 1038, 1097
Bse21I CCTNAGG 2 cut(s) 921, 990
Bse3DI GCAATG 1 cut(s) 662
BseBI CCWGG 2 cut(s) 597, 969
BseDI CCNNGG 3 cut(s) 595, 764, 1189
BseGI GGATG 3 cut(s) 895, 947, 977
BseMI GCAATG 1 cut(s) 662
BseMII CTCAG 5 cut(s) 912, 1004, 1122, 1341, 1419
BseNI ACTGG 9 cut(s) 155, 308, 442, 500, 584, 962, 985, 1038, 1097
BseRI GAGGAG 2 cut(s) 978, 1083
BseSI GKGCMC 2 cut(s) 1032, 1218
BseXI GCAGC 7 cut(s) 141, 439, 682, 691, 802, 1168, 1345
BseYI CCCAGC 1 cut(s) 884
BsgI GTGCAG 4 cut(s) 453, 801, 897, 942
BshFI GGCC 4 cut(s) 85, 308, 661, 1216
BshTI ACCGGT 1 cut(s) 644
BsiHKAI GWGCWC 1 cut(s) 583
BsiSI CCGG 2 cut(s) 645, 1391
BsiWI CGTACG 1 cut(s) 1178
BslFI GGGAC 2 cut(s) 392, 1207
BsmAI GTCTC 1 cut(s) 167
BsmFI GGGAC 2 cut(s) 392, 1207
BsnI GGCC 4 cut(s) 85, 308, 661, 1216
Bsp120I GGGCCC 1 cut(s) 1214
Bsp1286I GDGCHC 3 cut(s) 583, 1032, 1218
Bsp143I GATC 3 cut(s) 842, 925, 1381
Bsp19I CCATGG 1 cut(s) 764
BspACI CCGC 1 cut(s) 1142
BspANI GGCC 4 cut(s) 85, 308, 661, 1216
BspCNI CTCAG 5 cut(s) 913, 1003, 1121, 1342, 1418
BspLI GGNNCC 5 cut(s) 97, 139, 152, 1215, 1216
BspMAI CTGCAG 3 cut(s) 430, 457, 1027
BspMI ACCTGC 3 cut(s) 223, 446, 1420
BspOI GCTAGC 1 cut(s) 1188
BspPI GGATC 2 cut(s) 933, 1389
BsrDI GCAATG 1 cut(s) 662
BsrFI RCCGGY 2 cut(s) 644, 1390
BsrI ACTGG 9 cut(s) 155, 308, 442, 500, 584, 962, 985, 1038, 1097
BssAI RCCGGY 2 cut(s) 644, 1390
BssECI CCNNGG 3 cut(s) 595, 764, 1189
BssMI GATC 3 cut(s) 842, 925, 1381
BssT1I CCWWGG 2 cut(s) 764, 1189
Bst2UI CCWGG 2 cut(s) 597, 969
Bst4CI ACNGT 4 cut(s) 293, 538, 865, 1126
BstC8I GCNNGC 2 cut(s) 1186, 1310
BstDEI CTNAG 5 cut(s) 921, 990, 1108, 1350, 1405
BstDSI CCRYGG 1 cut(s) 764
BstENI CCTNNNNNAGG 1 cut(s) 90
BstF5I GGATG 3 cut(s) 895, 947, 977
BstKTI GATC 3 cut(s) 845, 928, 1384
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 3 cut(s) 842, 925, 1381
BstMWI GCNNNNNNNGC 8 cut(s) 449, 587, 667, 676, 679, 788, 821, 1355
BstNI CCWGG 2 cut(s) 597, 969
BstNSI RCATGY 1 cut(s) 782
BstSCI CCNGG 2 cut(s) 595, 967
BstSFI CTRYAG 4 cut(s) 426, 453, 1023, 1437
BstSLI GKGCMC 2 cut(s) 1032, 1218
BstV1I GCAGC 7 cut(s) 141, 439, 682, 691, 802, 1168, 1345
BstX2I RGATCY 2 cut(s) 842, 925
BstXI CCANNNNNNTGG 1 cut(s) 133
BstYI RGATCY 2 cut(s) 842, 925
Bsu36I CCTNAGG 2 cut(s) 921, 990
BsuI GTATCC 1 cut(s) 1138
BsuRI GGCC 4 cut(s) 85, 308, 661, 1216
BtgI CCRYGG 1 cut(s) 764
BtgZI GCGATG 1 cut(s) 950
BtsCI GGATG 3 cut(s) 895, 947, 977
BtsI GCAGTG 3 cut(s) 1020, 1032, 1293
BtsIMutI CAGTG 6 cut(s) 298, 484, 1020, 1032, 1122, 1293
BveI ACCTGC 3 cut(s) 223, 446, 1420
Cac8I GCNNGC 2 cut(s) 1186, 1310
CaiI CAGNNNCTG 3 cut(s) 404, 968, 1412
Cfr10I RCCGGY 2 cut(s) 644, 1390
Cfr13I GGNCC 6 cut(s) 306, 983, 1088, 1139, 1214, 1215
Csp6I GTAC 3 cut(s) 5, 861, 1179
CspAI ACCGGT 1 cut(s) 644
CviAII CATG 4 cut(s) 463, 765, 779, 1033
CviQI GTAC 3 cut(s) 5, 861, 1179
DdeI CTNAG 5 cut(s) 921, 990, 1108, 1350, 1405
DpnI GATC 3 cut(s) 844, 927, 1383
DpnII GATC 3 cut(s) 842, 925, 1381
DraIII CACNNNGTG 1 cut(s) 293
Eco130I CCWWGG 2 cut(s) 764, 1189
Eco147I AGGCCT 1 cut(s) 85
Eco24I GRGCYC 1 cut(s) 1218
Eco47I GGWCC 3 cut(s) 983, 1088, 1139
Eco57I CTGAAG 2 cut(s) 111, 1302
Eco81I CCTNAGG 2 cut(s) 921, 990
EcoNI CCTNNNNNAGG 1 cut(s) 90
EcoO109I RGGNCCY 2 cut(s) 1214, 1215
EcoRII CCWGG 2 cut(s) 595, 967
EcoT14I CCWWGG 2 cut(s) 764, 1189
EcoT22I ATGCAT 1 cut(s) 1261
EcoT38I GRGCYC 1 cut(s) 1218
ErhI CCWWGG 2 cut(s) 764, 1189
FaeI CATG 4 cut(s) 466, 768, 782, 1036
FaqI GGGAC 2 cut(s) 392, 1207
FatI CATG 4 cut(s) 462, 764, 778, 1032
FauNDI CATATG 1 cut(s) 1255
FblI GTMKAC 1 cut(s) 1436
Fnu4HI GCNGC 7 cut(s) 130, 453, 671, 680, 816, 1157, 1359
FokI GGATG 3 cut(s) 902, 934, 984
FriOI GRGCYC 1 cut(s) 1218
Fsp4HI GCNGC 7 cut(s) 130, 453, 671, 680, 816, 1157, 1359
FspBI CTAG 6 cut(s) 227, 411, 627, 663, 804, 1185
GluI GCNGC 7 cut(s) 130, 453, 671, 680, 816, 1157, 1359
GsaI CCCAGC 1 cut(s) 888
GsuI CTGGAG 3 cut(s) 483, 567, 1080
HaeIII GGCC 4 cut(s) 85, 308, 661, 1216
HapII CCGG 2 cut(s) 645, 1391
Hin1II CATG 4 cut(s) 466, 768, 782, 1036
HincII GTYRAC 2 cut(s) 561, 800
HindII GTYRAC 2 cut(s) 561, 800
HinfI GANTC 2 cut(s) 371, 1401
HpaII CCGG 2 cut(s) 645, 1391
Hpy166II GTNNAC 4 cut(s) 561, 800, 1088, 1437
Hpy188I TCNGA 2 cut(s) 385, 1302
Hpy188III TCNNGA 5 cut(s) 180, 420, 840, 920, 1230
Hpy8I GTNNAC 4 cut(s) 561, 800, 1088, 1437
HpyAV CCTTC 5 cut(s) 86, 693, 961, 1128, 1326
HpyCH4III ACNGT 4 cut(s) 293, 538, 865, 1126
HpyF10VI GCNNNNNNNGC 8 cut(s) 449, 587, 667, 676, 679, 788, 821, 1355
HpyF3I CTNAG 5 cut(s) 921, 990, 1108, 1350, 1405
Hsp92II CATG 4 cut(s) 466, 768, 782, 1036
Kzo9I GATC 3 cut(s) 842, 925, 1381
LmnI GCTCC 7 cut(s) 223, 328, 352, 586, 746, 1331, 1355
Lsp1109I GCAGC 7 cut(s) 141, 439, 682, 691, 802, 1168, 1345
LweI GCATC 4 cut(s) 190, 682, 878, 1268
MaeI CTAG 6 cut(s) 227, 411, 627, 663, 804, 1185
MaeIII GTNAC 3 cut(s) 256, 293, 458
MalI GATC 3 cut(s) 844, 927, 1383
MboI GATC 3 cut(s) 842, 925, 1381
MboII GAAGA 2 cut(s) 114, 918
MfeI CAATTG 1 cut(s) 900
MflI RGATCY 2 cut(s) 842, 925
MhlI GDGCHC 3 cut(s) 583, 1032, 1218
MluCI AATT 8 cut(s) 189, 361, 484, 631, 769, 877, 900, 1296
MmeI TCCRAC 1 cut(s) 245
Mph1103I ATGCAT 1 cut(s) 1261
MroXI GAANNNNTTC 1 cut(s) 118
MseI TTAA 3 cut(s) 188, 1055, 1373
MslI CAYNNNNRTG 1 cut(s) 1025
MspA1I CMGCKG 2 cut(s) 452, 815
MspI CCGG 2 cut(s) 645, 1391
MspR9I CCNGG 2 cut(s) 597, 969
MunI CAATTG 1 cut(s) 900
MvaI CCWGG 2 cut(s) 597, 969
MwoI GCNNNNNNNGC 8 cut(s) 449, 587, 667, 676, 679, 788, 821, 1355
NcoI CCATGG 1 cut(s) 764
NdeI CATATG 1 cut(s) 1255
NdeII GATC 3 cut(s) 842, 925, 1381
NheI GCTAGC 1 cut(s) 1184
NlaIII CATG 4 cut(s) 466, 768, 782, 1036
NlaIV GGNNCC 5 cut(s) 97, 139, 152, 1215, 1216
NmuCI GTSAC 1 cut(s) 293
NsiI ATGCAT 1 cut(s) 1261
NspI RCATGY 1 cut(s) 782
OliI CACNNNNGTG 1 cut(s) 1025
PaqCI CACCTGC 1 cut(s) 1420
PceI AGGCCT 1 cut(s) 85
PdmI GAANNNNTTC 1 cut(s) 118
PfeI GAWTC 2 cut(s) 371, 1401
Pfl23II CGTACG 1 cut(s) 1178
PflMI CCANNNNNTGG 3 cut(s) 479, 740, 968
PfoI TCCNGGA 1 cut(s) 967
PinAI ACCGGT 1 cut(s) 644
PkrI GCNGC 7 cut(s) 131, 454, 672, 681, 817, 1158, 1360
Psp6I CCWGG 2 cut(s) 595, 967
PspFI CCCAGC 1 cut(s) 884
PspGI CCWGG 2 cut(s) 595, 967
PspLI CGTACG 1 cut(s) 1178
PspN4I GGNNCC 5 cut(s) 97, 139, 152, 1215, 1216
PspOMI GGGCCC 1 cut(s) 1214
PspPI GGNCC 6 cut(s) 306, 983, 1088, 1139, 1214, 1215
PstI CTGCAG 3 cut(s) 430, 457, 1027
PstNI CAGNNNCTG 3 cut(s) 404, 968, 1412
PsuI RGATCY 2 cut(s) 842, 925
PvuII CAGCTG 2 cut(s) 452, 815
RsaI GTAC 3 cut(s) 6, 862, 1180
RsaNI GTAC 3 cut(s) 5, 861, 1179
RseI CAYNNNNRTG 1 cut(s) 1025
SaqAI TTAA 3 cut(s) 188, 1055, 1373
SatI GCNGC 7 cut(s) 130, 453, 671, 680, 816, 1157, 1359
Sau3AI GATC 3 cut(s) 842, 925, 1381
Sau96I GGNCC 6 cut(s) 306, 983, 1088, 1139, 1214, 1215
ScaI AGTACT 1 cut(s) 862
ScrFI CCNGG 2 cut(s) 597, 969
SduI GDGCHC 3 cut(s) 583, 1032, 1218
SfaNI GCATC 4 cut(s) 190, 682, 878, 1268
SfcI CTRYAG 4 cut(s) 426, 453, 1023, 1437
SinI GGWCC 3 cut(s) 983, 1088, 1139
SmiMI CAYNNNNRTG 1 cut(s) 1025
SmlI CTYRAG 2 cut(s) 237, 342
SmoI CTYRAG 2 cut(s) 237, 342
Sse9I AATT 8 cut(s) 189, 361, 484, 631, 769, 877, 900, 1296
SseBI AGGCCT 1 cut(s) 85
SsiI CCGC 1 cut(s) 1142
SspI AATATT 1 cut(s) 208
SspMI CTAG 6 cut(s) 227, 411, 627, 663, 804, 1185
StuI AGGCCT 1 cut(s) 85
StyD4I CCNGG 2 cut(s) 595, 967
StyI CCWWGG 2 cut(s) 764, 1189
TaaI ACNGT 4 cut(s) 293, 538, 865, 1126
TaqI TCGA 1 cut(s) 551
TasI AATT 8 cut(s) 189, 361, 484, 631, 769, 877, 900, 1296
TatI WGTACW 1 cut(s) 860
TfiI GAWTC 2 cut(s) 371, 1401
Tru1I TTAA 3 cut(s) 188, 1055, 1373
Tru9I TTAA 3 cut(s) 188, 1055, 1373
TscAI CASTG 6 cut(s) 298, 484, 1027, 1032, 1129, 1293
TseFI GTSAC 1 cut(s) 293
TseI GCWGC 7 cut(s) 129, 452, 670, 679, 815, 1156, 1358
Tsp45I GTSAC 1 cut(s) 293
TspDTI ATGAA 4 cut(s) 936, 953, 1215, 1359
TspGWI ACGGA 2 cut(s) 38, 88
TspRI CASTG 6 cut(s) 298, 484, 1027, 1032, 1129, 1293
Van91I CCANNNNNTGG 3 cut(s) 479, 740, 968
VpaK11BI GGWCC 3 cut(s) 983, 1088, 1139
XagI CCTNNNNNAGG 1 cut(s) 90
XapI RAATTY 4 cut(s) 361, 769, 877, 1296
XceI RCATGY 1 cut(s) 782
XcmI CCANNNNNNNNNTGG 1 cut(s) 969
XmiI GTMKAC 1 cut(s) 1436
XmnI GAANNNNTTC 1 cut(s) 118
XspI CTAG 6 cut(s) 227, 411, 627, 663, 804, 1185
ZrmI AGTACT 1 cut(s) 862
Zsp2I ATGCAT 1 cut(s) 1261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.