Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0012807

Physical Location & Seq

Genomic Coordinates Reverse (-)

4379282 .. 4383360

Gene Structure 4079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g08261.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGCCGGTGCAGCTGACGCCGAACGCGGTCCCGATCATCAACGGCGGCGATGTCAACCTGAAGCCGCTGATGCAGGTCACCGACGTCAAGCTTATCGGCTCGCAGGAGAGGTACCGGCTCCTGCTCTCCGACGGCGTCTGGGCTCAGCACGCCATGGTCGCGACTCAGCTCAACGAGCTGTTCAAGACCGGCCGGGTCAGGAAAGGCTCCGTCGTGCAGCTCACCGAGTACATTTGCAGCGAAGTCCAGAACCGCAAGATTATTGTGGCGCTGAATATGGAAACTATTGTACTGGACTCAGAGATTATTGGGAATCCAAAACCATATGGTGAGTCTGGTCCAACTGCTCAAACTGCGTTGCCAAAGAACAATTTTGAGCAGTCTGCCTATGGCAACAATCATATGATGGGCCAAGGGCCTGTTCCCAAATGGCAGAATCCCAGGCCTTCTTTTCATCCTGAAAACTCTGTTCCCAGTATGCCAAGTGCCAGACCAACATACCAGTCCGAAAGCTTTTATAACAATGTTCCGAATCCCAGACCTACATTTCGTCCTGAAATGTCAGCTCCCAGTGTGCCAAATTTCCGAGCTACAGTGCAACCTTCCTACCAGCCACCTCCACAGTATAAAAATCGTGGTACCGTGTTCAAGAATGAGGCACCAGCACGTATTATACCTATTAATGCTCTGAATCCTTATCAGGGAAGGTGGGCAATCAAGGCAAGAGTCACTGCGAAAGGGGATCAGCGTCGTTATAACAATGCTCGAGGAGATGGTAAGGTTTTCTCTTTCGACCTCCTTGACTCTGAGGGTGGGGAAATAAGAGTGACCTGCTTTAATGCTGTTCTTGACCGCTTTTATGATATTATTGAGGTTGGGAGAGTTTACTTGATATCAAAGGGTAGCTTAAAACCTGCGCAGAAGAACTTTAATCATCTGAAGAGTGACTGGGAGATAACTTTGGATGCGAGTTCAACAGTGGAACTGTGCCCTGATGAAGATGGTTCTATACCAGCCCAGCTGTTTGACTTCAAGCCTATTAGTGCAGTTGAGAGTGCTGAGAGTAATTCTATACTTGATGTTATTGGTGTTGTGACTTCTGTCAACCCTTCTACTACTATCCTGAGAAAGAATGGTATGGAAACTCAGAGAAGAATTCTGCATCTGAAGGATTGGTCTGGCATGAGTGTTGAGATAACCCTATGGGGGGAGGTTTGTAACAGGGAAGGTCAAAGACTGGAAGAGATGTTGGCTTCTGGTGTTTTTCCAGTTTTAGCTGTCAAAGCTGGGAAGGTTAACGACTTCAGTGGGAAATCCATAGGAACAATTCATTCTACCCGGCTGTACATCGACCCCCCAGATTTGCCCGAGGCTCGTCAGGTGAGGGACTGGTTTGATCGAGGGGGAAAGGATGCCGCTTCCGTGTCCATCTCTAAGGAATTTATGCCAGGAGGTGTAACTAAGAATGAGATACGCAAAACTGTTTCTCAGATCAAGGATGAAGGTCTTGGAAGATCAGATAAGCCAGACTGGGTCACTGTGAGGGCCACAATATCTTTCATTAAAACTGATTCTTTCTGTTACACAGCATGCCCATTGATGATTGGAGATAGGCAGTGTAGCAAGAAAGTGTCGAGGTCAGGAGACAGATGGCAGTGTGACAGGTGCAATCAAGAATTTGAGGAGTGTGATTATAGATATCTTCTTCAAGCTCAAATTCAGGACTCTACTGGATTGACTTGGGTGACGGCTTTTCAGGAATCAGGGGCAGAGATCTTGGGTTGCACAGCAAAGGAGTTGTACTTCTTGAAGTATGACGGGCAGGATGAGGAAAAGTTTGCAGACATAGTCCGGAGCAGTATTTTCAACCATTTTATGTTAAAGCTTAAGATCAAGGAGGAGTTGTATGGCGATGAGCAGAGGGTGAAGATCACAGTGGTTAAGGCAGATACGGTGAACTATTCTGCAGAGAGCAGATACATGCTCGATGTGATTTCAAAGTTTTCTAGCCCCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007140 GO:0007141 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009555 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0045132 GO:0045143 GO:0046483 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051704 GO:0051716 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03030 ko03420 ko03430 ko03440 ko03460 map03030 map03420 map03430 map03440 map03460

Pfam Domains

Protein Families

REPA_OB_2 Rep-A_N Rep_fac-A_C tRNA_anti-codon

Protein Analysis

673

Amino Acids

75.3

Weight (kDa)

7.48

Isoelectric Point (pI)

38.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rep-A_N	PF04057	5 - 97	4.1e-27	Replication factor-A protein 1, N-terminal domain
tRNA_anti-codon	PF01336	239 - 319	3.4e-08	OB-fold nucleic acid binding domain
REPA_OB_2	PF16900	347 - 451	7.1e-27	Replication protein A OB domain
Rep_fac-A_C	PF08646	511 - 661	1.2e-48	Replication factor-A C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G06510 AT2G06510
fragaria_vesca	FvH4_1g08261 FvH4_1g08261 FvH4_1g08261
malus_domestica	MD02G1087200.v1.1 MD15G1214800.v1.1
prunus_persica	Prupe.7G202500_v2.0.a1
pyrus_communis	pycom15g19050
rosa_chinensis	RchiOBHm_Chr2g0094351
rosa_laevigata	RLG00000016482
rosa_multiflora	Rmu_ssc0000229.1_g000002
rosa_roxburghii	Rroxscaffold_2G00147210
rosa_rugosa	Rorug02G0043400
rosa_samantha	Rh2AG091300 Rh2BG091000 Rh2CG093600 Rh2DG090000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	519, 756
AatII	GACGTC	1 cut(s)	87
Acc16I	TGCGCA	1 cut(s)	918
Acc36I	ACCTGC	3 cut(s)	64, 839, 922
Acc65I	GGTACC	2 cut(s)	111, 638
AccB1I	GGYRCC	3 cut(s)	111, 638, 658
AccII	CGCG	2 cut(s)	26, 161
AccIII	TCCGGA	1 cut(s)	1851
AciI	CCGC	6 cut(s)	26, 45, 65, 253, 853, 1416
AclWI	GGATC	1 cut(s)	750
AcoI	YGGCCR	1 cut(s)	190
AcsI	RAATTY	5 cut(s)	580, 1155, 1439, 1676, 1716
AcuI	CTGAAG	4 cut(s)	80, 959, 1187, 1288
AcyI	GRCGYC	3 cut(s)	17, 84, 135
AfaI	GTAC	6 cut(s)	113, 230, 291, 640, 1346, 1802
AfiI	CCNNNNNNNGG	3 cut(s)	701, 1206, 1207
AflII	CTTAAG	1 cut(s)	1886
AgsI	TTSAA	8 cut(s)	184, 649, 975, 1033, 1709, 1810, 1867, 1998
AjnI	CCWGG	2 cut(s)	440, 1447
AjuI	GAANNNNNNNTTGG	2 cut(s)	405, 437
Alw26I	GTCTC	1 cut(s)	1638
AlwI	GGATC	1 cut(s)	750
Ama87I	CYCGRG	2 cut(s)	765, 1367
Aor13HI	TCCGGA	1 cut(s)	1851
AoxI	GGCC	5 cut(s)	190, 409, 416, 443, 1545
ApeKI	GCWGC	3 cut(s)	10, 217, 237
ApoI	RAATTY	5 cut(s)	580, 1155, 1439, 1676, 1716
ArsI	GACNNNNNNTTYG	2 cut(s)	531, 563
AseI	ATTAAT	1 cut(s)	681
Asp718I	GGTACC	2 cut(s)	111, 638
AspLEI	GCGC	2 cut(s)	271, 919
AspS9I	GGNCC	5 cut(s)	28, 338, 409, 416, 1545
AsuC2I	CCSGG	2 cut(s)	194, 1339
AsuHPI	GGTGA	7 cut(s)	70, 214, 341, 1393, 1756, 1936, 1966
AvaI	CYCGRG	2 cut(s)	765, 1367
AvaII	GGWCC	2 cut(s)	28, 338
BaeGI	GKGCMC	1 cut(s)	992
BanI	GGYRCC	3 cut(s)	111, 638, 658
BanII	GRGCYC	1 cut(s)	145
BbvI	GCAGC	3 cut(s)	22, 229, 249
BccI	CCATC	5 cut(s)	400, 767, 995, 1436, 1644
BceAI	ACGGC	3 cut(s)	58, 148, 1764
BciT130I	CCWGG	2 cut(s)	442, 1449
BcnI	CCSGG	2 cut(s)	194, 1339
BcoDI	GTCTC	1 cut(s)	1638
BfaI	CTAG	1 cut(s)	2007
BfmI	CTRYAG	2 cut(s)	591, 1965
BfoI	RGCGCY	1 cut(s)	272
BfrI	CTTAAG	1 cut(s)	1886
BfuAI	ACCTGC	3 cut(s)	64, 839, 922
BglII	AGATCT	1 cut(s)	1773
BisI	GCNGC	6 cut(s)	11, 46, 65, 218, 238, 1416
BlpI	GCTNAGC	1 cut(s)	144
BlsI	GCNGC	6 cut(s)	12, 47, 66, 219, 239, 1417
Bme1390I	CCNGG	4 cut(s)	194, 442, 1339, 1449
Bme18I	GGWCC	2 cut(s)	28, 338
BmeT110I	CYCGRG	2 cut(s)	765, 1367
BmgT120I	GGNCC	5 cut(s)	28, 338, 409, 416, 1545
BmiI	GGNNCC	6 cut(s)	30, 113, 119, 208, 640, 660
BmrFI	CCNGG	4 cut(s)	194, 442, 1339, 1449
BmrI	ACTGGG	4 cut(s)	468, 564, 958, 1540
BmsI	GCATC	4 cut(s)	60, 955, 1171, 1402
BmuI	ACTGGG	4 cut(s)	468, 564, 958, 1540
BoxI	GACNNNNGTC	1 cut(s)	1100
Bpu1102I	GCTNAGC	1 cut(s)	144
BpuMI	CCSGG	2 cut(s)	194, 1339
BsaAI	YACGTR	1 cut(s)	668
BsaHI	GRCGYC	3 cut(s)	17, 84, 135
BsaJI	CCNNGG	4 cut(s)	153, 412, 440, 1368
BsaWI	WCCGGW	1 cut(s)	1851
BsaXI	ACNNNNNCTCC	2 cut(s)	1889, 1919
Bsc4I	CCNNNNNNNGG	3 cut(s)	701, 1206, 1207
Bse118I	RCCGGY	3 cut(s)	4, 114, 188
BseAI	TCCGGA	1 cut(s)	1851
BseBI	CCWGG	2 cut(s)	442, 1449
BseDI	CCNNGG	4 cut(s)	153, 412, 440, 1368
BseGI	GGATG	5 cut(s)	454, 970, 1417, 1504, 1831
BseLI	CCNNNNNNNGG	3 cut(s)	701, 1206, 1207
BseMII	CTCAG	8 cut(s)	158, 179, 312, 798, 1050, 1115, 1160, 1502
BseRI	GAGGAG	3 cut(s)	783, 1697, 1913
BseSI	GKGCMC	1 cut(s)	992
BseX3I	CGGCCG	1 cut(s)	190
BseXI	GCAGC	3 cut(s)	22, 229, 249
BseYI	CCCAGC	2 cut(s)	1017, 1286
BsgI	GTGCAG	3 cut(s)	29, 236, 1065
Bsh1236I	CGCG	2 cut(s)	26, 161
Bsh1285I	CGRYCG	1 cut(s)	193
BshFI	GGCC	5 cut(s)	192, 411, 418, 445, 1547
BshNI	GGYRCC	3 cut(s)	111, 638, 658
BsiEI	CGRYCG	1 cut(s)	193
BsiHKCI	CYCGRG	2 cut(s)	765, 1367
BsiSI	CCGG	6 cut(s)	5, 115, 189, 193, 1339, 1852
BslFI	GGGAC	2 cut(s)	14, 1400
BslI	CCNNNNNNNGG	3 cut(s)	701, 1206, 1207
BsmAI	GTCTC	1 cut(s)	1638
BsmFI	GGGAC	2 cut(s)	14, 1400
BsnI	GGCC	5 cut(s)	192, 411, 418, 445, 1547
BsoBI	CYCGRG	2 cut(s)	765, 1367
Bsp1286I	GDGCHC	2 cut(s)	145, 992
Bsp13I	TCCGGA	1 cut(s)	1851
Bsp1407I	TGTACA	1 cut(s)	1344
Bsp143I	GATC	8 cut(s)	33, 742, 1396, 1491, 1514, 1773, 1890, 1929
Bsp1720I	GCTNAGC	1 cut(s)	144
Bsp19I	CCATGG	1 cut(s)	153
Bsp68I	TCGCGA	1 cut(s)	161
BspACI	CCGC	6 cut(s)	26, 45, 65, 253, 853, 1416
BspANI	GGCC	5 cut(s)	192, 411, 418, 445, 1547
BspCNI	CTCAG	8 cut(s)	157, 178, 311, 799, 1051, 1116, 1159, 1501
BspEI	TCCGGA	1 cut(s)	1851
BspFNI	CGCG	2 cut(s)	26, 161
BspLI	GGNNCC	6 cut(s)	30, 113, 119, 208, 640, 660
BspMAI	CTGCAG	1 cut(s)	1969
BspMI	ACCTGC	3 cut(s)	64, 839, 922
BspPI	GGATC	1 cut(s)	750
BspT107I	GGYRCC	3 cut(s)	111, 638, 658
BspTI	CTTAAG	1 cut(s)	1886
BsrFI	RCCGGY	3 cut(s)	4, 114, 188
BsrGI	TGTACA	1 cut(s)	1344
BssAI	RCCGGY	3 cut(s)	4, 114, 188
BssECI	CCNNGG	4 cut(s)	153, 412, 440, 1368
BssMI	GATC	8 cut(s)	33, 742, 1396, 1491, 1514, 1773, 1890, 1929
BssNI	GRCGYC	3 cut(s)	17, 84, 135
BssT1I	CCWWGG	2 cut(s)	153, 412
Bst2UI	CCWGG	2 cut(s)	442, 1449
Bst4CI	ACNGT	9 cut(s)	595, 624, 643, 979, 987, 1483, 1540, 1936, 1954
Bst6I	CTCTTC	2 cut(s)	935, 1236
BstACI	GRCGYC	3 cut(s)	17, 84, 135
BstAFI	CTTAAG	1 cut(s)	1886
BstAUI	TGTACA	1 cut(s)	1344
BstBAI	YACGTR	1 cut(s)	668
BstC8I	GCNNGC	3 cut(s)	101, 150, 1591
BstDSI	CCRYGG	1 cut(s)	153
BstEII	GGTNACC	1 cut(s)	76
BstF5I	GGATG	5 cut(s)	454, 970, 1417, 1504, 1831
BstFNI	CGCG	2 cut(s)	26, 161
BstH2I	RGCGCY	1 cut(s)	272
BstHHI	GCGC	2 cut(s)	271, 919
BstKTI	GATC	8 cut(s)	36, 745, 1399, 1494, 1517, 1776, 1893, 1932
BstMAI	GTCTC	1 cut(s)	1638
BstMBI	GATC	8 cut(s)	33, 742, 1396, 1491, 1514, 1773, 1890, 1929
BstMCI	CGRYCG	1 cut(s)	193
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 16, 70, 149, 158, 175, 353, 719, 1283
BstNI	CCWGG	2 cut(s)	442, 1449
BstNSI	RCATGY	2 cut(s)	1593, 1984
BstPAI	GACNNNNGTC	1 cut(s)	1100
BstPI	GGTNACC	1 cut(s)	76
BstSCI	CCNGG	4 cut(s)	192, 440, 1337, 1447
BstSFI	CTRYAG	2 cut(s)	591, 1965
BstSLI	GKGCMC	1 cut(s)	992
BstUI	CGCG	2 cut(s)	26, 161
BstV1I	GCAGC	3 cut(s)	22, 229, 249
BstX2I	RGATCY	1 cut(s)	1773
BstYI	RGATCY	1 cut(s)	1773
BstZI	CGGCCG	1 cut(s)	190
BsuRI	GGCC	5 cut(s)	192, 411, 418, 445, 1547
BtgI	CCRYGG	1 cut(s)	153
BtgZI	GCGATG	2 cut(s)	63, 1926
BtsCI	GGATG	5 cut(s)	454, 970, 1417, 1504, 1831
BtsI	GCAGTG	3 cut(s)	729, 1622, 1661
BtsIMutI	CAGTG	9 cut(s)	577, 600, 729, 984, 1312, 1536, 1622, 1661, 1941
BtuMI	TCGCGA	1 cut(s)	161
BveI	ACCTGC	3 cut(s)	64, 839, 922
Cac8I	GCNNGC	3 cut(s)	101, 150, 1591
CfoI	GCGC	2 cut(s)	271, 919
Cfr10I	RCCGGY	3 cut(s)	4, 114, 188
Cfr13I	GGNCC	5 cut(s)	28, 338, 409, 416, 1545
CseI	GACGC	3 cut(s)	25, 124, 737
Csp6I	GTAC	6 cut(s)	112, 229, 290, 639, 1345, 1801
CviAII	CATG	4 cut(s)	154, 1183, 1590, 1981
CviQI	GTAC	6 cut(s)	112, 229, 290, 639, 1345, 1801
DpnI	GATC	8 cut(s)	35, 744, 1398, 1493, 1516, 1775, 1892, 1931
DpnII	GATC	8 cut(s)	33, 742, 1396, 1491, 1514, 1773, 1890, 1929
EaeI	YGGCCR	1 cut(s)	190
EagI	CGGCCG	1 cut(s)	190
Eam1104I	CTCTTC	2 cut(s)	935, 1236
EarI	CTCTTC	2 cut(s)	935, 1236
EclXI	CGGCCG	1 cut(s)	190
Eco130I	CCWWGG	2 cut(s)	153, 412
Eco147I	AGGCCT	1 cut(s)	445
Eco24I	GRGCYC	1 cut(s)	145
Eco32I	GATATC	2 cut(s)	894, 1700
Eco47I	GGWCC	2 cut(s)	28, 338
Eco52I	CGGCCG	1 cut(s)	190
Eco57I	CTGAAG	4 cut(s)	80, 959, 1187, 1288
Eco88I	CYCGRG	2 cut(s)	765, 1367
Eco91I	GGTNACC	1 cut(s)	76
EcoO109I	RGGNCCY	1 cut(s)	416
EcoO65I	GGTNACC	1 cut(s)	76
EcoRI	GAATTC	1 cut(s)	1155
EcoRII	CCWGG	2 cut(s)	440, 1447
EcoRV	GATATC	2 cut(s)	894, 1700
EcoT14I	CCWWGG	2 cut(s)	153, 412
EcoT38I	GRGCYC	1 cut(s)	145
ErhI	CCWWGG	2 cut(s)	153, 412
FaeI	CATG	4 cut(s)	157, 1186, 1593, 1984
FalI	AAGNNNNNCTT	2 cut(s)	890, 922
FaqI	GGGAC	2 cut(s)	14, 1400
FatI	CATG	4 cut(s)	153, 1182, 1589, 1980
FauNDI	CATATG	2 cut(s)	325, 402
Fnu4HI	GCNGC	6 cut(s)	11, 46, 65, 218, 238, 1416
FokI	GGATG	5 cut(s)	441, 977, 1424, 1511, 1838
FriOI	GRGCYC	1 cut(s)	145
Fsp4HI	GCNGC	6 cut(s)	11, 46, 65, 218, 238, 1416
FspBI	CTAG	1 cut(s)	2007
FspI	TGCGCA	1 cut(s)	918
GlaI	GCGC	2 cut(s)	270, 918
GluI	GCNGC	6 cut(s)	11, 46, 65, 218, 238, 1416
GsaI	CCCAGC	2 cut(s)	1021, 1290
HaeII	RGCGCY	1 cut(s)	272
HaeIII	GGCC	5 cut(s)	192, 411, 418, 445, 1547
HapII	CCGG	6 cut(s)	5, 115, 189, 193, 1339, 1852
HgaI	GACGC	3 cut(s)	25, 124, 737
HhaI	GCGC	2 cut(s)	271, 919
Hin1I	GRCGYC	3 cut(s)	17, 84, 135
Hin1II	CATG	4 cut(s)	157, 1186, 1593, 1984
Hin6I	GCGC	2 cut(s)	269, 917
HinP1I	GCGC	2 cut(s)	269, 917
HincII	GTYRAC	3 cut(s)	55, 1105, 1297
HindII	GTYRAC	3 cut(s)	55, 1105, 1297
HindIII	AAGCTT	3 cut(s)	89, 511, 1883
HpaI	GTTAAC	1 cut(s)	1297
HpaII	CCGG	6 cut(s)	5, 115, 189, 193, 1339, 1852
HphI	GGTGA	7 cut(s)	70, 214, 341, 1393, 1756, 1936, 1966
Hpy166II	GTNNAC	5 cut(s)	55, 886, 1105, 1297, 1957
Hpy8I	GTNNAC	5 cut(s)	55, 886, 1105, 1297, 1957
Hpy99I	CGWCG	4 cut(s)	86, 134, 215, 753
HpyAV	CCTTC	8 cut(s)	456, 612, 699, 1119, 1162, 1220, 1285, 1496
HpyCH4III	ACNGT	9 cut(s)	595, 624, 643, 979, 987, 1483, 1540, 1936, 1954
HpyCH4IV	ACGT	2 cut(s)	84, 667
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 16, 70, 149, 158, 175, 353, 719, 1283
HpySE526I	ACGT	2 cut(s)	84, 667
Hsp92I	GRCGYC	3 cut(s)	17, 84, 135
Hsp92II	CATG	4 cut(s)	157, 1186, 1593, 1984
HspAI	GCGC	2 cut(s)	269, 917
Kpn2I	TCCGGA	1 cut(s)	1851
KpnI	GGTACC	2 cut(s)	115, 642
KspAI	GTTAAC	1 cut(s)	1297
Kzo9I	GATC	8 cut(s)	33, 742, 1396, 1491, 1514, 1773, 1890, 1929
LmnI	GCTCC	4 cut(s)	123, 212, 571, 1854
Lsp1109I	GCAGC	3 cut(s)	22, 229, 249
LweI	GCATC	4 cut(s)	60, 955, 1171, 1402
MaeI	CTAG	1 cut(s)	2007
MaeII	ACGT	2 cut(s)	84, 667
MalI	GATC	8 cut(s)	35, 744, 1398, 1493, 1516, 1775, 1892, 1931
MboI	GATC	8 cut(s)	33, 742, 1396, 1491, 1514, 1773, 1890, 1929
MboII	GAAGA	9 cut(s)	934, 952, 1010, 1164, 1253, 1524, 1694, 1697, 1939
MflI	RGATCY	1 cut(s)	1773
MhlI	GDGCHC	2 cut(s)	145, 992
MluCI	AATT	8 cut(s)	370, 580, 1066, 1155, 1326, 1439, 1676, 1716
MlyI	GAGTC	6 cut(s)	157, 290, 341, 735, 797, 1718
MmeI	TCCRAC	2 cut(s)	153, 365
MroI	TCCGGA	1 cut(s)	1851
MspA1I	CMGCKG	3 cut(s)	13, 67, 1021
MspCI	CTTAAG	1 cut(s)	1886
MspI	CCGG	6 cut(s)	5, 115, 189, 193, 1339, 1852
MspR9I	CCNGG	4 cut(s)	194, 442, 1339, 1449
MvaI	CCWGG	2 cut(s)	442, 1449
MvnI	CGCG	2 cut(s)	26, 161
MwoI	GCNNNNNNNGC	9 cut(s)	10, 16, 70, 149, 158, 175, 353, 719, 1283
NciI	CCSGG	2 cut(s)	194, 1339
NcoI	CCATGG	1 cut(s)	153
NdeI	CATATG	2 cut(s)	325, 402
NdeII	GATC	8 cut(s)	33, 742, 1396, 1491, 1514, 1773, 1890, 1929
NlaIII	CATG	4 cut(s)	157, 1186, 1593, 1984
NlaIV	GGNNCC	6 cut(s)	30, 113, 119, 208, 640, 660
NmuCI	GTSAC	8 cut(s)	76, 727, 826, 944, 1093, 1534, 1658, 1744
NruI	TCGCGA	1 cut(s)	161
NsbI	TGCGCA	1 cut(s)	918
NspI	RCATGY	2 cut(s)	1593, 1984
PaeI	GCATGC	1 cut(s)	1593
PaeR7I	CTCGAG	1 cut(s)	765
PceI	AGGCCT	1 cut(s)	445
PfeI	GAWTC	6 cut(s)	313, 436, 532, 691, 1571, 1760
PflFI	GACNNNGTC	3 cut(s)	134, 1532, 1847
PkrI	GCNGC	6 cut(s)	12, 47, 66, 219, 239, 1417
PleI	GAGTC	6 cut(s)	157, 290, 340, 734, 797, 1718
PpsI	GAGTC	6 cut(s)	157, 290, 340, 734, 797, 1718
Ppu21I	YACGTR	1 cut(s)	668
PshAI	GACNNNNGTC	1 cut(s)	1100
PshBI	ATTAAT	1 cut(s)	681
PsiI	TTATAA	2 cut(s)	519, 756
Psp6I	CCWGG	2 cut(s)	440, 1447
PspEI	GGTNACC	1 cut(s)	76
PspFI	CCCAGC	2 cut(s)	1017, 1286
PspGI	CCWGG	2 cut(s)	440, 1447
PspN4I	GGNNCC	6 cut(s)	30, 113, 119, 208, 640, 660
PspPI	GGNCC	5 cut(s)	28, 338, 409, 416, 1545
PspXI	VCTCGAGB	1 cut(s)	765
PstI	CTGCAG	1 cut(s)	1969
PsuI	RGATCY	1 cut(s)	1773
PsyI	GACNNNGTC	3 cut(s)	134, 1532, 1847
PvuII	CAGCTG	2 cut(s)	13, 1021
RruI	TCGCGA	1 cut(s)	161
RsaI	GTAC	6 cut(s)	113, 230, 291, 640, 1346, 1802
RsaNI	GTAC	6 cut(s)	112, 229, 290, 639, 1345, 1801
SatI	GCNGC	6 cut(s)	11, 46, 65, 218, 238, 1416
Sau3AI	GATC	8 cut(s)	33, 742, 1396, 1491, 1514, 1773, 1890, 1929
Sau96I	GGNCC	5 cut(s)	28, 338, 409, 416, 1545
SchI	GAGTC	6 cut(s)	157, 290, 341, 735, 797, 1718
ScrFI	CCNGG	4 cut(s)	194, 442, 1339, 1449
SduI	GDGCHC	2 cut(s)	145, 992
SfaNI	GCATC	4 cut(s)	60, 955, 1171, 1402
SfcI	CTRYAG	2 cut(s)	591, 1965
Sfr274I	CTCGAG	1 cut(s)	765
SinI	GGWCC	2 cut(s)	28, 338
SlaI	CTCGAG	1 cut(s)	765
SmlI	CTYRAG	2 cut(s)	765, 1886
SmoI	CTYRAG	2 cut(s)	765, 1886
SphI	GCATGC	1 cut(s)	1593
Sse9I	AATT	8 cut(s)	370, 580, 1066, 1155, 1326, 1439, 1676, 1716
SseBI	AGGCCT	1 cut(s)	445
SsiI	CCGC	6 cut(s)	26, 45, 65, 253, 853, 1416
SspMI	CTAG	1 cut(s)	2007
StuI	AGGCCT	1 cut(s)	445
StyD4I	CCNGG	4 cut(s)	192, 440, 1337, 1447
StyI	CCWWGG	2 cut(s)	153, 412
TaaI	ACNGT	9 cut(s)	595, 624, 643, 979, 987, 1483, 1540, 1936, 1954
TaiI	ACGT	2 cut(s)	87, 670
TaqI	TCGA	6 cut(s)	766, 792, 1350, 1399, 1634, 1986
TasI	AATT	8 cut(s)	370, 580, 1066, 1155, 1326, 1439, 1676, 1716
TatI	WGTACW	4 cut(s)	228, 289, 1344, 1800
TauI	GCSGC	3 cut(s)	48, 67, 1418
TfiI	GAWTC	6 cut(s)	313, 436, 532, 691, 1571, 1760
TscAI	CASTG	9 cut(s)	577, 600, 736, 984, 1312, 1543, 1622, 1661, 1941
TseFI	GTSAC	8 cut(s)	76, 727, 826, 944, 1093, 1534, 1658, 1744
TseI	GCWGC	3 cut(s)	10, 217, 237
Tsp45I	GTSAC	8 cut(s)	76, 727, 826, 944, 1093, 1534, 1658, 1744
TspDTI	ATGAA	5 cut(s)	443, 1011, 1319, 1515, 1549
TspGWI	ACGGA	2 cut(s)	199, 1411
TspRI	CASTG	9 cut(s)	577, 600, 736, 984, 1312, 1543, 1622, 1661, 1941
Tth111I	GACNNNGTC	3 cut(s)	134, 1532, 1847
Vha464I	CTTAAG	1 cut(s)	1886
VpaK11BI	GGWCC	2 cut(s)	28, 338
VspI	ATTAAT	1 cut(s)	681
XapI	RAATTY	5 cut(s)	580, 1155, 1439, 1676, 1716
XceI	RCATGY	2 cut(s)	1593, 1984
XhoI	CTCGAG	1 cut(s)	765
XspI	CTAG	1 cut(s)	2007
ZraI	GACGTC	1 cut(s)	85

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.