Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G06510 AT2G06510 |
| fragaria_vesca | FvH4_1g08261 FvH4_1g08261 FvH4_1g08261 |
| malus_domestica | MD02G1087200.v1.1 MD15G1214800.v1.1 |
| prunus_persica | Prupe.7G202500_v2.0.a1 |
| pyrus_communis | pycom15g19050 |
| rosa_chinensis | RchiOBHm_Chr2g0094351 |
| rosa_laevigata | RLG00000016482 |
| rosa_multiflora | Rmu_ssc0000229.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00147210 |
| rosa_rugosa | Rorug02G0043400 |
| rosa_samantha | Rh2AG091300 Rh2BG091000 Rh2CG093600 Rh2DG090000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 64, 794, 877 |
| Acc65I | GGTACC | 1 cut(s) | 111 |
| AccB1I | GGYRCC | 2 cut(s) | 111, 613 |
| AccII | CGCG | 2 cut(s) | 26, 32 |
| AciI | CCGC | 2 cut(s) | 32, 808 |
| AclI | AACGTT | 1 cut(s) | 914 |
| AclWI | GGATC | 5 cut(s) | 308, 321, 632, 692, 705 |
| AcsI | RAATTY | 4 cut(s) | 535, 880, 1628, 1668 |
| AcuI | CTGAAG | 3 cut(s) | 783, 970, 1896 |
| AcyI | GRCGYC | 1 cut(s) | 17 |
| AdeI | CACNNNGTG | 1 cut(s) | 529 |
| AfaI | GTAC | 6 cut(s) | 113, 426, 581, 1754, 1853, 1925 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 656 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 548 |
| AjnI | CCWGG | 3 cut(s) | 1399, 1691, 1707 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1779, 1811 |
| Alw21I | GWGCWC | 2 cut(s) | 381, 942 |
| Alw26I | GTCTC | 4 cut(s) | 130, 446, 1782, 1841 |
| AlwI | GGATC | 5 cut(s) | 308, 321, 632, 692, 705 |
| Ama87I | CYCGRG | 1 cut(s) | 720 |
| AoxI | GGCC | 2 cut(s) | 481, 1494 |
| ApeKI | GCWGC | 1 cut(s) | 166 |
| ApoI | RAATTY | 4 cut(s) | 535, 880, 1628, 1668 |
| AseI | ATTAAT | 2 cut(s) | 636, 1251 |
| AsiSI | GCGATCGC | 1 cut(s) | 30 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 881 |
| Asp718I | GGTACC | 1 cut(s) | 111 |
| AspS9I | GGNCC | 2 cut(s) | 465, 482 |
| AsuHPI | GGTGA | 4 cut(s) | 214, 1868, 1882, 1912 |
| AvaI | CYCGRG | 1 cut(s) | 720 |
| AvaII | GGWCC | 1 cut(s) | 465 |
| BamHI | GGATCC | 2 cut(s) | 313, 697 |
| BanI | GGYRCC | 2 cut(s) | 111, 613 |
| BanII | GRGCYC | 1 cut(s) | 942 |
| Bbv12I | GWGCWC | 2 cut(s) | 381, 942 |
| BbvI | GCAGC | 1 cut(s) | 178 |
| BccI | CCATC | 5 cut(s) | 218, 722, 897, 950, 1596 |
| BceAI | ACGGC | 1 cut(s) | 119 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 768, 802 |
| BciT130I | CCWGG | 3 cut(s) | 1401, 1693, 1709 |
| BciVI | GTATCC | 1 cut(s) | 1357 |
| BclI | TGATCA | 1 cut(s) | 1348 |
| BcoDI | GTCTC | 4 cut(s) | 130, 446, 1782, 1841 |
| BfaI | CTAG | 1 cut(s) | 1953 |
| BfuAI | ACCTGC | 3 cut(s) | 64, 794, 877 |
| BfuI | GTATCC | 1 cut(s) | 1357 |
| BglII | AGATCT | 1 cut(s) | 1725 |
| BisI | GCNGC | 2 cut(s) | 33, 167 |
| BlpI | GCTNAGC | 1 cut(s) | 1738 |
| BlsI | GCNGC | 2 cut(s) | 34, 168 |
| Bme1390I | CCNGG | 3 cut(s) | 1401, 1693, 1709 |
| Bme18I | GGWCC | 1 cut(s) | 465 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 548 |
| BmeT110I | CYCGRG | 1 cut(s) | 720 |
| BmgT120I | GGNCC | 2 cut(s) | 465, 482 |
| BmiI | GGNNCC | 6 cut(s) | 113, 208, 315, 466, 615, 699 |
| BmrFI | CCNGG | 3 cut(s) | 1401, 1693, 1709 |
| BmrI | ACTGGG | 1 cut(s) | 913 |
| BmsI | GCATC | 3 cut(s) | 121, 910, 1765 |
| BmuI | ACTGGG | 1 cut(s) | 913 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1738 |
| BpuEI | CTTGAG | 2 cut(s) | 399, 1354 |
| Bsa29I | ATCGAT | 1 cut(s) | 81 |
| BsaHI | GRCGYC | 1 cut(s) | 17 |
| BsaJI | CCNNGG | 4 cut(s) | 94, 153, 478, 1692 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 899, 929, 1779, 1809 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 656 |
| Bse118I | RCCGGY | 3 cut(s) | 4, 44, 616 |
| Bse1I | ACTGG | 4 cut(s) | 297, 908, 1223, 1687 |
| Bse3DI | GCAATG | 2 cut(s) | 356, 436 |
| BseBI | CCWGG | 3 cut(s) | 1401, 1693, 1709 |
| BseCI | ATCGAT | 1 cut(s) | 81 |
| BseDI | CCNNGG | 4 cut(s) | 94, 153, 478, 1692 |
| BseGI | GGATG | 5 cut(s) | 213, 925, 1453, 1607, 1777 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 656 |
| BseMI | GCAATG | 2 cut(s) | 356, 436 |
| BseMII | CTCAG | 8 cut(s) | 54, 291, 396, 457, 505, 1115, 1451, 1752 |
| BseNI | ACTGG | 4 cut(s) | 297, 908, 1223, 1687 |
| BseRI | GAGGAG | 4 cut(s) | 83, 738, 1649, 1859 |
| BseXI | GCAGC | 1 cut(s) | 178 |
| BseYI | CCCAGC | 1 cut(s) | 1241 |
| BsgI | GTGCAG | 2 cut(s) | 92, 455 |
| Bsh1236I | CGCG | 2 cut(s) | 26, 32 |
| Bsh1285I | CGRYCG | 3 cut(s) | 30, 178, 1884 |
| BshFI | GGCC | 2 cut(s) | 483, 1496 |
| BshNI | GGYRCC | 2 cut(s) | 111, 613 |
| BshVI | ATCGAT | 1 cut(s) | 81 |
| BsiEI | CGRYCG | 3 cut(s) | 30, 178, 1884 |
| BsiHKAI | GWGCWC | 2 cut(s) | 381, 942 |
| BsiHKCI | CYCGRG | 1 cut(s) | 720 |
| BsiSI | CCGG | 4 cut(s) | 5, 45, 617, 1475 |
| BsiWI | CGTACG | 1 cut(s) | 1851 |
| BslFI | GGGAC | 2 cut(s) | 478, 1055 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 656 |
| BsmAI | GTCTC | 4 cut(s) | 130, 446, 1782, 1841 |
| BsmBI | CGTCTC | 1 cut(s) | 1841 |
| BsmFI | GGGAC | 2 cut(s) | 478, 1055 |
| BsnI | GGCC | 2 cut(s) | 483, 1496 |
| BsoBI | CYCGRG | 1 cut(s) | 720 |
| Bsp1286I | GDGCHC | 2 cut(s) | 381, 942 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1738 |
| Bsp19I | CCATGG | 1 cut(s) | 153 |
| BspACI | CCGC | 2 cut(s) | 32, 808 |
| BspANI | GGCC | 2 cut(s) | 483, 1496 |
| BspCNI | CTCAG | 8 cut(s) | 53, 292, 395, 456, 504, 1114, 1450, 1751 |
| BspDI | ATCGAT | 1 cut(s) | 81 |
| BspFNI | CGCG | 2 cut(s) | 26, 32 |
| BspLI | GGNNCC | 6 cut(s) | 113, 208, 315, 466, 615, 699 |
| BspMI | ACCTGC | 3 cut(s) | 64, 794, 877 |
| BspPI | GGATC | 5 cut(s) | 308, 321, 632, 692, 705 |
| BspT107I | GGYRCC | 2 cut(s) | 111, 613 |
| BsrDI | GCAATG | 2 cut(s) | 356, 436 |
| BsrFI | RCCGGY | 3 cut(s) | 4, 44, 616 |
| BsrI | ACTGG | 4 cut(s) | 297, 908, 1223, 1687 |
| BssAI | RCCGGY | 3 cut(s) | 4, 44, 616 |
| BssECI | CCNNGG | 4 cut(s) | 94, 153, 478, 1692 |
| BssNI | GRCGYC | 1 cut(s) | 17 |
| BssT1I | CCWWGG | 1 cut(s) | 153 |
| Bst2UI | CCWGG | 3 cut(s) | 1401, 1693, 1709 |
| Bst4CI | ACNGT | 9 cut(s) | 116, 479, 550, 579, 934, 1432, 1489, 1856, 1882 |
| Bst6I | CTCTTC | 1 cut(s) | 1716 |
| BstACI | GRCGYC | 1 cut(s) | 17 |
| BstC8I | GCNNGC | 4 cut(s) | 46, 101, 150, 1540 |
| BstDEI | CTNAG | 9 cut(s) | 40, 300, 382, 443, 491, 1101, 1121, 1437, 1738 |
| BstDSI | CCRYGG | 2 cut(s) | 153, 478 |
| BstF5I | GGATG | 5 cut(s) | 213, 925, 1453, 1607, 1777 |
| BstFNI | CGCG | 2 cut(s) | 26, 32 |
| BstMAI | GTCTC | 4 cut(s) | 130, 446, 1782, 1841 |
| BstMCI | CGRYCG | 3 cut(s) | 30, 178, 1884 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 16, 32, 41, 70, 158, 353, 674, 1238 |
| BstNI | CCWGG | 3 cut(s) | 1401, 1693, 1709 |
| BstNSI | RCATGY | 1 cut(s) | 1930 |
| BstSCI | CCNGG | 3 cut(s) | 1399, 1691, 1707 |
| BstUI | CGCG | 2 cut(s) | 26, 32 |
| BstV1I | GCAGC | 1 cut(s) | 178 |
| BstX2I | RGATCY | 3 cut(s) | 313, 697, 1725 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1715 |
| BstYI | RGATCY | 3 cut(s) | 313, 697, 1725 |
| Bsu15I | ATCGAT | 1 cut(s) | 81 |
| BsuI | GTATCC | 1 cut(s) | 1357 |
| BsuRI | GGCC | 2 cut(s) | 483, 1496 |
| BsuTUI | ATCGAT | 1 cut(s) | 81 |
| BtgI | CCRYGG | 2 cut(s) | 153, 478 |
| BtsCI | GGATG | 5 cut(s) | 213, 925, 1453, 1607, 1777 |
| BtsI | GCAGTG | 2 cut(s) | 1571, 1613 |
| BtsIMutI | CAGTG | 3 cut(s) | 1485, 1571, 1613 |
| BveI | ACCTGC | 3 cut(s) | 64, 794, 877 |
| Cac8I | GCNNGC | 4 cut(s) | 46, 101, 150, 1540 |
| Cfr10I | RCCGGY | 3 cut(s) | 4, 44, 616 |
| Cfr13I | GGNCC | 2 cut(s) | 465, 482 |
| ClaI | ATCGAT | 1 cut(s) | 81 |
| CseI | GACGC | 2 cut(s) | 25, 1359 |
| Csp6I | GTAC | 6 cut(s) | 112, 425, 580, 1753, 1852, 1924 |
| CviAII | CATG | 5 cut(s) | 154, 277, 590, 1927, 1936 |
| CviQI | GTAC | 6 cut(s) | 112, 425, 580, 1753, 1852, 1924 |
| DdeI | CTNAG | 9 cut(s) | 40, 300, 382, 443, 491, 1101, 1121, 1437, 1738 |
| DraIII | CACNNNGTG | 1 cut(s) | 529 |
| DriI | GACNNNNNGTC | 1 cut(s) | 548 |
| Eam1104I | CTCTTC | 1 cut(s) | 1716 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 548 |
| EarI | CTCTTC | 1 cut(s) | 1716 |
| Ecl136II | GAGCTC | 1 cut(s) | 940 |
| Eco130I | CCWWGG | 1 cut(s) | 153 |
| Eco24I | GRGCYC | 1 cut(s) | 942 |
| Eco32I | GATATC | 4 cut(s) | 1053, 1315, 1503, 1652 |
| Eco47I | GGWCC | 1 cut(s) | 465 |
| Eco53kI | GAGCTC | 1 cut(s) | 940 |
| Eco57I | CTGAAG | 3 cut(s) | 783, 970, 1896 |
| Eco88I | CYCGRG | 1 cut(s) | 720 |
| EcoICRI | GAGCTC | 1 cut(s) | 940 |
| EcoO109I | RGGNCCY | 1 cut(s) | 465 |
| EcoRII | CCWGG | 3 cut(s) | 1399, 1691, 1707 |
| EcoRV | GATATC | 4 cut(s) | 1053, 1315, 1503, 1652 |
| EcoT14I | CCWWGG | 1 cut(s) | 153 |
| EcoT38I | GRGCYC | 1 cut(s) | 942 |
| ErhI | CCWWGG | 1 cut(s) | 153 |
| Esp3I | CGTCTC | 1 cut(s) | 1841 |
| FaeI | CATG | 5 cut(s) | 157, 280, 593, 1930, 1939 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 845, 877, 968, 1000 |
| FaqI | GGGAC | 2 cut(s) | 478, 1055 |
| FatI | CATG | 5 cut(s) | 153, 276, 589, 1926, 1935 |
| FauNDI | CATATG | 2 cut(s) | 325, 405 |
| FbaI | TGATCA | 1 cut(s) | 1348 |
| Fnu4HI | GCNGC | 2 cut(s) | 33, 167 |
| FokI | GGATG | 5 cut(s) | 200, 932, 1460, 1614, 1784 |
| FriOI | GRGCYC | 1 cut(s) | 942 |
| Fsp4HI | GCNGC | 2 cut(s) | 33, 167 |
| FspBI | CTAG | 1 cut(s) | 1953 |
| GluI | GCNGC | 2 cut(s) | 33, 167 |
| GsaI | CCCAGC | 1 cut(s) | 1245 |
| HaeIII | GGCC | 2 cut(s) | 483, 1496 |
| HapII | CCGG | 4 cut(s) | 5, 45, 617, 1475 |
| HgaI | GACGC | 2 cut(s) | 25, 1359 |
| Hin1I | GRCGYC | 1 cut(s) | 17 |
| Hin1II | CATG | 5 cut(s) | 157, 280, 593, 1930, 1939 |
| HincII | GTYRAC | 2 cut(s) | 1033, 1060 |
| HindII | GTYRAC | 2 cut(s) | 1033, 1060 |
| HindIII | AAGCTT | 1 cut(s) | 1829 |
| HpaII | CCGG | 4 cut(s) | 5, 45, 617, 1475 |
| HphI | GGTGA | 4 cut(s) | 214, 1868, 1882, 1912 |
| Hpy166II | GTNNAC | 5 cut(s) | 523, 841, 1033, 1060, 1903 |
| Hpy188III | TCNNGA | 8 cut(s) | 184, 199, 247, 416, 803, 1590, 1625, 1673 |
| Hpy8I | GTNNAC | 5 cut(s) | 523, 841, 1033, 1060, 1903 |
| Hpy99I | CGWCG | 1 cut(s) | 708 |
| HpyAV | CCTTC | 8 cut(s) | 654, 758, 994, 1074, 1175, 1445, 1486, 1861 |
| HpyCH4III | ACNGT | 9 cut(s) | 116, 479, 550, 579, 934, 1432, 1489, 1856, 1882 |
| HpyCH4IV | ACGT | 2 cut(s) | 914, 1850 |
| HpyCH4V | TGCA | 6 cut(s) | 10, 73, 436, 923, 1173, 1778 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 16, 32, 41, 70, 158, 353, 674, 1238 |
| HpyF3I | CTNAG | 9 cut(s) | 40, 300, 382, 443, 491, 1101, 1121, 1437, 1738 |
| HpySE526I | ACGT | 2 cut(s) | 914, 1850 |
| Hsp92I | GRCGYC | 1 cut(s) | 17 |
| Hsp92II | CATG | 5 cut(s) | 157, 280, 593, 1930, 1939 |
| KpnI | GGTACC | 1 cut(s) | 115 |
| KroI | GCCGGC | 1 cut(s) | 44 |
| KroNI | GCCGGC | 1 cut(s) | 46 |
| Ksp22I | TGATCA | 1 cut(s) | 1348 |
| LmnI | GCTCC | 3 cut(s) | 96, 937, 1800 |
| Lsp1109I | GCAGC | 1 cut(s) | 178 |
| LweI | GCATC | 3 cut(s) | 121, 910, 1765 |
| MaeI | CTAG | 1 cut(s) | 1953 |
| MaeII | ACGT | 2 cut(s) | 914, 1850 |
| MaeIII | GTNAC | 7 cut(s) | 682, 781, 1483, 1529, 1568, 1610, 1856 |
| MflI | RGATCY | 3 cut(s) | 313, 697, 1725 |
| MhlI | GDGCHC | 2 cut(s) | 381, 942 |
| MlyI | GAGTC | 4 cut(s) | 290, 448, 752, 1316 |
| MmeI | TCCRAC | 4 cut(s) | 261, 565, 577, 897 |
| MroNI | GCCGGC | 1 cut(s) | 44 |
| MroXI | GAANNNNTTC | 1 cut(s) | 881 |
| MseI | TTAA | 8 cut(s) | 87, 474, 636, 1251, 1512, 1812, 1833, 1887 |
| MslI | CAYNNNNRTG | 1 cut(s) | 996 |
| MspA1I | CMGCKG | 1 cut(s) | 1297 |
| MspI | CCGG | 4 cut(s) | 5, 45, 617, 1475 |
| MspR9I | CCNGG | 3 cut(s) | 1401, 1693, 1709 |
| MvaI | CCWGG | 3 cut(s) | 1401, 1693, 1709 |
| MvnI | CGCG | 2 cut(s) | 26, 32 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 16, 32, 41, 70, 158, 353, 674, 1238 |
| NaeI | GCCGGC | 1 cut(s) | 46 |
| NcoI | CCATGG | 1 cut(s) | 153 |
| NdeI | CATATG | 2 cut(s) | 325, 405 |
| NgoMIV | GCCGGC | 1 cut(s) | 44 |
| NlaIII | CATG | 5 cut(s) | 157, 280, 593, 1930, 1939 |
| NlaIV | GGNNCC | 6 cut(s) | 113, 208, 315, 466, 615, 699 |
| NmeAIII | GCCGAG | 1 cut(s) | 75 |
| NmuCI | GTSAC | 5 cut(s) | 682, 781, 1483, 1610, 1856 |
| NspI | RCATGY | 1 cut(s) | 1930 |
| PaeR7I | CTCGAG | 1 cut(s) | 720 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 23, 606 |
| PdiI | GCCGGC | 1 cut(s) | 46 |
| PdmI | GAANNNNTTC | 1 cut(s) | 881 |
| PfeI | GAWTC | 8 cut(s) | 180, 332, 419, 487, 646, 1117, 1520, 1712 |
| Pfl23II | CGTACG | 1 cut(s) | 1851 |
| PfoI | TCCNGGA | 2 cut(s) | 1399, 1707 |
| PkrI | GCNGC | 2 cut(s) | 34, 168 |
| Ple19I | CGATCG | 1 cut(s) | 30 |
| PleI | GAGTC | 4 cut(s) | 290, 447, 752, 1316 |
| PpsI | GAGTC | 4 cut(s) | 290, 447, 752, 1316 |
| PpuMI | RGGWCCY | 1 cut(s) | 465 |
| PshBI | ATTAAT | 2 cut(s) | 636, 1251 |
| Psp124BI | GAGCTC | 1 cut(s) | 942 |
| Psp1406I | AACGTT | 1 cut(s) | 914 |
| Psp5II | RGGWCCY | 1 cut(s) | 465 |
| Psp6I | CCWGG | 3 cut(s) | 1399, 1691, 1707 |
| PspFI | CCCAGC | 1 cut(s) | 1241 |
| PspGI | CCWGG | 3 cut(s) | 1399, 1691, 1707 |
| PspLI | CGTACG | 1 cut(s) | 1851 |
| PspN4I | GGNNCC | 6 cut(s) | 113, 208, 315, 466, 615, 699 |
| PspPI | GGNCC | 2 cut(s) | 465, 482 |
| PspPPI | RGGWCCY | 1 cut(s) | 465 |
| PspXI | VCTCGAGB | 1 cut(s) | 720 |
| PsuI | RGATCY | 3 cut(s) | 313, 697, 1725 |
| PvuI | CGATCG | 1 cut(s) | 30 |
| PvuII | CAGCTG | 1 cut(s) | 1297 |
| RgaI | GCGATCGC | 1 cut(s) | 30 |
| RsaI | GTAC | 6 cut(s) | 113, 426, 581, 1754, 1853, 1925 |
| RsaNI | GTAC | 6 cut(s) | 112, 425, 580, 1753, 1852, 1924 |
| RseI | CAYNNNNRTG | 1 cut(s) | 996 |
| SacI | GAGCTC | 1 cut(s) | 942 |
| SaqAI | TTAA | 8 cut(s) | 87, 474, 636, 1251, 1512, 1812, 1833, 1887 |
| SatI | GCNGC | 2 cut(s) | 33, 167 |
| Sau96I | GGNCC | 2 cut(s) | 465, 482 |
| SchI | GAGTC | 4 cut(s) | 290, 448, 752, 1316 |
| ScrFI | CCNGG | 3 cut(s) | 1401, 1693, 1709 |
| SduI | GDGCHC | 2 cut(s) | 381, 942 |
| SfaAI | GCGATCGC | 1 cut(s) | 30 |
| SfaNI | GCATC | 3 cut(s) | 121, 910, 1765 |
| Sfr274I | CTCGAG | 1 cut(s) | 720 |
| SgfI | GCGATCGC | 1 cut(s) | 30 |
| SinI | GGWCC | 1 cut(s) | 465 |
| SlaI | CTCGAG | 1 cut(s) | 720 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 996 |
| SmlI | CTYRAG | 3 cut(s) | 414, 720, 1333 |
| SmoI | CTYRAG | 3 cut(s) | 414, 720, 1333 |
| SsiI | CCGC | 2 cut(s) | 32, 808 |
| SspMI | CTAG | 1 cut(s) | 1953 |
| SstI | GAGCTC | 1 cut(s) | 942 |
| StyD4I | CCNGG | 3 cut(s) | 1399, 1691, 1707 |
| StyI | CCWWGG | 1 cut(s) | 153 |
| TaaI | ACNGT | 9 cut(s) | 116, 479, 550, 579, 934, 1432, 1489, 1856, 1882 |
| TaiI | ACGT | 2 cut(s) | 917, 1853 |
| TaqI | TCGA | 5 cut(s) | 59, 81, 721, 747, 1379 |
| TaqII | GACCGA | 1 cut(s) | 192 |
| TatI | WGTACW | 3 cut(s) | 579, 1752, 1923 |
| TauI | GCSGC | 1 cut(s) | 35 |
| TfiI | GAWTC | 8 cut(s) | 180, 332, 419, 487, 646, 1117, 1520, 1712 |
| Tru1I | TTAA | 8 cut(s) | 87, 474, 636, 1251, 1512, 1812, 1833, 1887 |
| Tru9I | TTAA | 8 cut(s) | 87, 474, 636, 1251, 1512, 1812, 1833, 1887 |
| TscAI | CASTG | 3 cut(s) | 1492, 1571, 1613 |
| TseFI | GTSAC | 5 cut(s) | 682, 781, 1483, 1610, 1856 |
| TseI | GCWGC | 1 cut(s) | 166 |
| Tsp45I | GTSAC | 5 cut(s) | 682, 781, 1483, 1610, 1856 |
| TspDTI | ATGAA | 7 cut(s) | 109, 494, 966, 1274, 1291, 1464, 1498 |
| TspGWI | ACGGA | 2 cut(s) | 637, 1261 |
| TspRI | CASTG | 3 cut(s) | 1492, 1571, 1613 |
| VpaK11BI | GGWCC | 1 cut(s) | 465 |
| VspI | ATTAAT | 2 cut(s) | 636, 1251 |
| XapI | RAATTY | 4 cut(s) | 535, 880, 1628, 1668 |
| XceI | RCATGY | 1 cut(s) | 1930 |
| XhoI | CTCGAG | 1 cut(s) | 720 |
| XmnI | GAANNNNTTC | 1 cut(s) | 881 |
| XspI | CTAG | 1 cut(s) | 1953 |