Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0012807

Physical Location & Seq

Genomic Coordinates Reverse (-)

6820550 .. 6823486

Gene Structure 2937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1087200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGCCGGTGAACCTGACGCCGAACGCCATCGCGGCGATGATAGGCGGCGACGTGAATTTGAAGCCGTTGGTGCAGGTGGTCGATATTAAGCTCATCGGCACGCAGGAGAGGTACCGTTTCATGGTCTCCGACGGCGTTTCGTGCCAGCATGCAATGATCTCTTCGCAGCTCAACGACCGAATCAAGACCAACCGAGTCCAGATAGGCTCCGTCGTCCAGCTCACCGAGTACATTAGCACCATCCTCCAGAACCGCCAGGTTATTGTTGTGCTGAACATGGAAACTATCATACTGAACTCTGACGTGATTGGGAATCCAAAACCATATGGTCCACCTGATTCAGCTGCTCAAAATGCGTTGCGTAATGGCAGTGTTCAGCGATCAGCTGGTAATCATATGATTTCGCAAAATCCTGTTCACAATGTACAGAATCTTAGACCTACTTCTCATTCTGAGAGGCCAAGCGTCAGACCTCGTCTTCATCCTCAAAGCTCTCCACACGATGGGCCAAATTTTCGAGCTACTGTTCAGCCTCCTTACCAACCACCTCCACATTACAAAAATCATGGCCCAATCATGAAGAACGAGGCACCAGCACGGATCATTCCTATTAATGCTCTGAATCCTTATCAGGGAAGATGGGCTATCAAGGCAAGGGTTACAGCAAAGGGGGATCCCCGTCGGTATAATAATGCTAAAGGAGATGGTAAAGTTTTCTCTTTCGACCTCCTTGACTCTGAAGGAGGGGAAATACGAGTTACCTGCTTCAATGCTGTTCTTGACCGCTTCTATGATATTATTGAGGTTGGCAGAGTTTACTTGATTTCAAAGGGAAGCTTGAAACCTGCCCAGAAGAATTTCAACCATCTGAAGAATGACTGGGAGATAACTTTGGATGCAAGTTCAACCGTGGACCTCTGCCCTGATGAAGATGGTTCCATACCAGCGCAAAACTTCAACTTCAGGCCGATTAGTGAAATTGAAAATGCTGAAAGTAATTCTATTGTTGATGTTATTGGTATTGTGATATCTGTCAATCCTTCAGTTCCTATCATGAGGAAGAACGGTATGGAAACTCAGAGAAGAATTCTGAATCTAAAGGACCGGTCGGACAAGAGCGTTGAGGTAACCCTTTGGGGGGATTTCTGCAACAGGGAAGGTCAAAAGCTTGAAGAGATGTTGGCTTCTGGGTTTTCCCCAGTTTTAGCCGTTAAAGCTGGGAAGATTAATGATTTCAGTGGCAAGTCTGTTGGAACAATTCATTCTACACAGCTATTTATAAACCCAGATATTTCTGATGCTCGTACCTTGAGAGACTGGTTTGACCGAGGGGGCAAGGATACTGCTTCAGTCTCCATTTCTAAAGACATTGTTCCAGGAGGAACTAAGAATGAGATACGCAAAACTGTTTCTCAGATCAGGGACGAAGGTCTCGGAAGATCAGATAAGCCAGACTGGGTCACTGTGAAGGGGACGATTTCTTTTATCAAAACAGATTCTTTCTGTTACACAGCTTGTCCGTTGATGATCGGGGATAGGCAGTGCAACAAAAAGGTGTCGAGGTCAGGAAACAGTGGATGGCAATGTGACAGATGCAATCAAGAATTCGAGGAGTGCGACTACAGATATCTCCTTCAAGCCCAAATTCAAGACCACACTGGATTGACTTGGGCGACAGCTTTTCAGGAAGCCGGGGAAGAGATCTTAGGTTGCTCAGCAAAGGCGCTGTACTTGTTGAAGTACGAAGAGCAGGATGAATCAAGATTTGGAGACATAGTCCGGAGCAGCATCTTTAATCAGTTTCTATTCAAGCTTAAAATCAAAGAGGAGATGTATGGCGATGAGCAGAGGGTGAAGATCACCGTGGTGAAGGCAGATAAGGTGAACTATTCTTCAGAAAGCCGATACATGCTCGATATGATTTCGAAGCACTCTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007140 GO:0007141 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009555 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0045132 GO:0045143 GO:0046483 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051704 GO:0051716 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03030 ko03420 ko03430 ko03440 ko03460 map03030 map03420 map03430 map03440 map03460

Pfam Domains

Protein Families

REPA_OB_2 Rep-A_N Rep_fac-A_C tRNA_anti-codon

Protein Analysis

647

Amino Acids

72.3

Weight (kDa)

8.46

Isoelectric Point (pI)

35.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rep-A_N	PF04057	5 - 96	1.4e-25	Replication factor-A protein 1, N-terminal domain
tRNA_anti-codon	PF01336	215 - 295	9.6e-08	OB-fold nucleic acid binding domain
REPA_OB_2	PF16900	324 - 428	2.2e-28	Replication protein A OB domain
Rep_fac-A_C	PF08646	486 - 637	6.4e-51	Replication factor-A C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G06510 AT2G06510
fragaria_vesca	FvH4_1g08261 FvH4_1g08261 FvH4_1g08261
malus_domestica	MD02G1087200.v1.1 MD15G1214800.v1.1
prunus_persica	Prupe.7G202500_v2.0.a1
pyrus_communis	pycom15g19050
rosa_chinensis	RchiOBHm_Chr2g0094351
rosa_laevigata	RLG00000016482
rosa_multiflora	Rmu_ssc0000229.1_g000002
rosa_roxburghii	Rroxscaffold_2G00147210
rosa_rugosa	Rorug02G0043400
rosa_samantha	Rh2AG091300 Rh2BG091000 Rh2CG093600 Rh2DG090000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1280
AarI	CACCTGC	1 cut(s)	64
Acc36I	ACCTGC	3 cut(s)	64, 770, 853
Acc65I	GGTACC	1 cut(s)	111
AccB1I	GGYRCC	2 cut(s)	111, 589
AccB7I	CCANNNNNTGG	1 cut(s)	503
AccII	CGCG	1 cut(s)	32
AccIII	TCCGGA	1 cut(s)	1779
AciI	CCGC	4 cut(s)	32, 45, 253, 784
AclWI	GGATC	3 cut(s)	608, 668, 681
AcsI	RAATTY	6 cut(s)	55, 511, 856, 1086, 1604, 1644
AcuI	CTGAAG	6 cut(s)	759, 890, 946, 1026, 1332, 1878
AcyI	GRCGYC	1 cut(s)	17
AfaI	GTAC	6 cut(s)	113, 230, 426, 1306, 1730, 1742
AfiI	CCNNNNNNNGG	5 cut(s)	121, 503, 632, 1137, 1138
AgeI	ACCGGT	1 cut(s)	1104
AjiI	CACGTC	2 cut(s)	52, 304
AjnI	CCWGG	2 cut(s)	255, 1375
AjuI	GAANNNNNNNTTGG	2 cut(s)	1749, 1781
AleI	CACNNNNGTG	1 cut(s)	1865
Alw26I	GTCTC	5 cut(s)	130, 1308, 1357, 1436, 1764
AlwI	GGATC	3 cut(s)	608, 668, 681
Aor13HI	TCCGGA	1 cut(s)	1779
AoxI	GGCC	4 cut(s)	458, 506, 568, 965
ApeKI	GCWGC	3 cut(s)	166, 344, 1785
ApoI	RAATTY	6 cut(s)	55, 511, 856, 1086, 1604, 1644
AseI	ATTAAT	2 cut(s)	612, 1227
AsiGI	ACCGGT	1 cut(s)	1104
Asp700I	GAANNNNTTC	1 cut(s)	857
Asp718I	GGTACC	1 cut(s)	111
AspLEI	GCGC	2 cut(s)	949, 1726
AspS9I	GGNCC	5 cut(s)	329, 506, 569, 913, 1102
AsuC2I	CCSGG	1 cut(s)	1693
AsuHPI	GGTGA	6 cut(s)	19, 214, 1852, 1864, 1879, 1894
AsuII	TTCGAA	1 cut(s)	1925
AvaII	GGWCC	3 cut(s)	329, 913, 1102
BamHI	GGATCC	1 cut(s)	673
BanI	GGYRCC	2 cut(s)	111, 589
BbsI	GAAGAC	1 cut(s)	470
BbvI	GCAGC	3 cut(s)	178, 331, 1797
BccI	CCATC	8 cut(s)	35, 248, 497, 633, 698, 873, 926, 1572
BceAI	ACGGC	3 cut(s)	49, 148, 1193
BcgI	CGANNNNNNTGC	2 cut(s)	744, 778
BciT130I	CCWGG	2 cut(s)	257, 1377
BciVI	GTATCC	1 cut(s)	1333
BcnI	CCSGG	1 cut(s)	1693
BcoDI	GTCTC	5 cut(s)	130, 1308, 1357, 1436, 1764
BfaI	CTAG	1 cut(s)	1935
BfmI	CTRYAG	1 cut(s)	1621
BfoI	RGCGCY	1 cut(s)	1727
BfuAI	ACCTGC	3 cut(s)	64, 770, 853
BfuI	GTATCC	1 cut(s)	1333
BglI	GCCNNNNNGGC	1 cut(s)	32
BglII	AGATCT	1 cut(s)	1701
BisI	GCNGC	5 cut(s)	33, 46, 167, 345, 1786
BlpI	GCTNAGC	1 cut(s)	1714
BlsI	GCNGC	5 cut(s)	34, 47, 168, 346, 1787
Bme1390I	CCNGG	3 cut(s)	257, 1377, 1693
Bme18I	GGWCC	3 cut(s)	329, 913, 1102
BmgBI	CACGTC	2 cut(s)	52, 304
BmgT120I	GGNCC	5 cut(s)	329, 506, 569, 913, 1102
BmiI	GGNNCC	5 cut(s)	113, 208, 591, 675, 937
BmrFI	CCNGG	3 cut(s)	257, 1377, 1693
BmrI	ACTGGG	3 cut(s)	889, 1193, 1465
BmsI	GCATC	4 cut(s)	886, 1288, 1583, 1797
BmuI	ACTGGG	3 cut(s)	889, 1193, 1465
BoxI	GACNNNNGTC	1 cut(s)	1428
BpiI	GAAGAC	1 cut(s)	470
BpmI	CTGGAG	1 cut(s)	230
Bpu1102I	GCTNAGC	1 cut(s)	1714
Bpu14I	TTCGAA	1 cut(s)	1925
BpuEI	CTTGAG	1 cut(s)	1330
BpuMI	CCSGG	1 cut(s)	1693
BsaHI	GRCGYC	1 cut(s)	17
BsaI	GGTCTC	2 cut(s)	130, 1436
BsaJI	CCNNGG	4 cut(s)	909, 1327, 1692, 1863
BsaWI	WCCGGW	2 cut(s)	1104, 1779
BsaXI	ACNNNNNCTCC	2 cut(s)	1761, 1791
Bsc4I	CCNNNNNNNGG	5 cut(s)	121, 503, 632, 1137, 1138
Bse118I	RCCGGY	2 cut(s)	4, 1104
Bse1I	ACTGG	5 cut(s)	884, 1199, 1322, 1460, 1663
Bse3DI	GCAATG	2 cut(s)	159, 1589
BseAI	TCCGGA	1 cut(s)	1779
BseBI	CCWGG	2 cut(s)	257, 1377
BseDI	CCNNGG	4 cut(s)	909, 1327, 1692, 1863
BseGI	GGATG	5 cut(s)	240, 481, 901, 1583, 1759
BseLI	CCNNNNNNNGG	5 cut(s)	121, 503, 632, 1137, 1138
BseMI	GCAATG	2 cut(s)	159, 1589
BseMII	CTCAG	4 cut(s)	444, 1091, 1427, 1728
BseNI	ACTGG	5 cut(s)	884, 1199, 1322, 1460, 1663
BseRI	GAGGAG	2 cut(s)	1625, 1841
BseXI	GCAGC	3 cut(s)	178, 331, 1797
BseYI	CCCAGC	1 cut(s)	1217
BsgI	GTGCAG	1 cut(s)	92
Bsh1236I	CGCG	1 cut(s)	32
Bsh1285I	CGRYCG	2 cut(s)	178, 1109
BshFI	GGCC	4 cut(s)	460, 508, 570, 967
BshNI	GGYRCC	2 cut(s)	111, 589
BshTI	ACCGGT	1 cut(s)	1104
BsiEI	CGRYCG	2 cut(s)	178, 1109
BsiSI	CCGG	4 cut(s)	5, 1105, 1692, 1780
BslFI	GGGAC	2 cut(s)	1436, 1486
BslI	CCNNNNNNNGG	5 cut(s)	121, 503, 632, 1137, 1138
BsmAI	GTCTC	5 cut(s)	130, 1308, 1357, 1436, 1764
BsmFI	GGGAC	2 cut(s)	1436, 1486
BsnI	GGCC	4 cut(s)	460, 508, 570, 967
Bso31I	GGTCTC	2 cut(s)	130, 1436
Bsp119I	TTCGAA	1 cut(s)	1925
Bsp13I	TCCGGA	1 cut(s)	1779
Bsp1407I	TGTACA	1 cut(s)	424
Bsp143I	GATC	9 cut(s)	156, 380, 600, 673, 1416, 1439, 1527, 1701, 1857
Bsp1720I	GCTNAGC	1 cut(s)	1714
BspACI	CCGC	4 cut(s)	32, 45, 253, 784
BspANI	GGCC	4 cut(s)	460, 508, 570, 967
BspCNI	CTCAG	4 cut(s)	445, 1090, 1426, 1727
BspEI	TCCGGA	1 cut(s)	1779
BspFNI	CGCG	1 cut(s)	32
BspHI	TCATGA	2 cut(s)	576, 1053
BspLI	GGNNCC	5 cut(s)	113, 208, 591, 675, 937
BspMI	ACCTGC	3 cut(s)	64, 770, 853
BspPI	GGATC	3 cut(s)	608, 668, 681
BspQI	GCTCTTC	1 cut(s)	1740
BspT104I	TTCGAA	1 cut(s)	1925
BspT107I	GGYRCC	2 cut(s)	111, 589
BspTNI	GGTCTC	2 cut(s)	130, 1436
BsrDI	GCAATG	2 cut(s)	159, 1589
BsrFI	RCCGGY	2 cut(s)	4, 1104
BsrGI	TGTACA	1 cut(s)	424
BsrI	ACTGG	5 cut(s)	884, 1199, 1322, 1460, 1663
BssAI	RCCGGY	2 cut(s)	4, 1104
BssECI	CCNNGG	4 cut(s)	909, 1327, 1692, 1863
BssMI	GATC	9 cut(s)	156, 380, 600, 673, 1416, 1439, 1527, 1701, 1857
BssNI	GRCGYC	1 cut(s)	17
Bst2UI	CCWGG	2 cut(s)	257, 1377
Bst4CI	ACNGT	8 cut(s)	116, 526, 910, 1067, 1408, 1465, 1574, 1864
Bst6I	CTCTTC	4 cut(s)	166, 1167, 1692, 1740
BstACI	GRCGYC	1 cut(s)	17
BstAUI	TGTACA	1 cut(s)	424
BstBI	TTCGAA	1 cut(s)	1925
BstC8I	GCNNGC	3 cut(s)	101, 146, 150
BstDEI	CTNAG	7 cut(s)	434, 453, 1077, 1386, 1413, 1705, 1714
BstDSI	CCRYGG	2 cut(s)	909, 1863
BstEII	GGTNACC	1 cut(s)	1126
BstF5I	GGATG	5 cut(s)	240, 481, 901, 1583, 1759
BstFNI	CGCG	1 cut(s)	32
BstH2I	RGCGCY	1 cut(s)	1727
BstHHI	GCGC	2 cut(s)	949, 1726
BstKTI	GATC	9 cut(s)	159, 383, 603, 676, 1419, 1442, 1530, 1704, 1860
BstMAI	GTCTC	5 cut(s)	130, 1308, 1357, 1436, 1764
BstMBI	GATC	9 cut(s)	156, 380, 600, 673, 1416, 1439, 1527, 1701, 1857
BstMCI	CGRYCG	2 cut(s)	178, 1109
BstMWI	GCNNNNNNNGC	6 cut(s)	32, 70, 141, 353, 650, 1214
BstNI	CCWGG	2 cut(s)	257, 1377
BstNSI	RCATGY	2 cut(s)	152, 1912
BstPAI	GACNNNNGTC	1 cut(s)	1428
BstPI	GGTNACC	1 cut(s)	1126
BstSCI	CCNGG	3 cut(s)	255, 1375, 1691
BstSFI	CTRYAG	1 cut(s)	1621
BstUI	CGCG	1 cut(s)	32
BstV1I	GCAGC	3 cut(s)	178, 331, 1797
BstV2I	GAAGAC	1 cut(s)	470
BstX2I	RGATCY	2 cut(s)	673, 1701
BstYI	RGATCY	2 cut(s)	673, 1701
BsuI	GTATCC	1 cut(s)	1333
BsuRI	GGCC	4 cut(s)	460, 508, 570, 967
BtgI	CCRYGG	2 cut(s)	909, 1863
BtgZI	GCGATG	3 cut(s)	13, 50, 1854
BtrI	CACGTC	2 cut(s)	52, 304
BtsCI	GGATG	5 cut(s)	240, 481, 901, 1583, 1759
BtsI	GCAGTG	2 cut(s)	376, 1547
BtsIMutI	CAGTG	6 cut(s)	376, 1243, 1461, 1547, 1579, 1656
BveI	ACCTGC	3 cut(s)	64, 770, 853
Cac8I	GCNNGC	3 cut(s)	101, 146, 150
CciI	TCATGA	2 cut(s)	576, 1053
CfoI	GCGC	2 cut(s)	949, 1726
Cfr10I	RCCGGY	2 cut(s)	4, 1104
Cfr13I	GGNCC	5 cut(s)	329, 506, 569, 913, 1102
CseI	GACGC	2 cut(s)	25, 454
Csp6I	GTAC	6 cut(s)	112, 229, 425, 1305, 1729, 1741
CspAI	ACCGGT	1 cut(s)	1104
CviAII	CATG	7 cut(s)	121, 149, 277, 566, 577, 1054, 1909
CviQI	GTAC	6 cut(s)	112, 229, 425, 1305, 1729, 1741
DdeI	CTNAG	7 cut(s)	434, 453, 1077, 1386, 1413, 1705, 1714
DpnI	GATC	9 cut(s)	158, 382, 602, 675, 1418, 1441, 1529, 1703, 1859
DpnII	GATC	9 cut(s)	156, 380, 600, 673, 1416, 1439, 1527, 1701, 1857
Eam1104I	CTCTTC	4 cut(s)	166, 1167, 1692, 1740
EarI	CTCTTC	4 cut(s)	166, 1167, 1692, 1740
Eco31I	GGTCTC	2 cut(s)	130, 1436
Eco32I	GATATC	2 cut(s)	1029, 1628
Eco47I	GGWCC	3 cut(s)	329, 913, 1102
Eco57I	CTGAAG	6 cut(s)	759, 890, 946, 1026, 1332, 1878
Eco91I	GGTNACC	1 cut(s)	1126
EcoO65I	GGTNACC	1 cut(s)	1126
EcoRI	GAATTC	2 cut(s)	1086, 1604
EcoRII	CCWGG	2 cut(s)	255, 1375
EcoRV	GATATC	2 cut(s)	1029, 1628
FaeI	CATG	7 cut(s)	124, 152, 280, 569, 580, 1057, 1912
FalI	AAGNNNNNCTT	2 cut(s)	821, 853
FaqI	GGGAC	2 cut(s)	1436, 1486
FatI	CATG	7 cut(s)	120, 148, 276, 565, 576, 1053, 1908
FauNDI	CATATG	2 cut(s)	325, 396
Fnu4HI	GCNGC	5 cut(s)	33, 46, 167, 345, 1786
FokI	GGATG	5 cut(s)	227, 468, 908, 1590, 1766
Fsp4HI	GCNGC	5 cut(s)	33, 46, 167, 345, 1786
FspBI	CTAG	1 cut(s)	1935
GlaI	GCGC	2 cut(s)	948, 1725
GluI	GCNGC	5 cut(s)	33, 46, 167, 345, 1786
GsaI	CCCAGC	1 cut(s)	1221
GsuI	CTGGAG	1 cut(s)	230
HaeII	RGCGCY	1 cut(s)	1727
HaeIII	GGCC	4 cut(s)	460, 508, 570, 967
HapII	CCGG	4 cut(s)	5, 1105, 1692, 1780
HgaI	GACGC	2 cut(s)	25, 454
HhaI	GCGC	2 cut(s)	949, 1726
Hin1I	GRCGYC	1 cut(s)	17
Hin1II	CATG	7 cut(s)	124, 152, 280, 569, 580, 1057, 1912
Hin6I	GCGC	2 cut(s)	947, 1724
HinP1I	GCGC	2 cut(s)	947, 1724
HindIII	AAGCTT	3 cut(s)	835, 1166, 1811
HpaII	CCGG	4 cut(s)	5, 1105, 1692, 1780
HphI	GGTGA	6 cut(s)	19, 214, 1852, 1864, 1879, 1894
Hpy166II	GTNNAC	6 cut(s)	10, 332, 418, 817, 913, 1885
Hpy8I	GTNNAC	6 cut(s)	10, 332, 418, 817, 913, 1885
Hpy99I	CGWCG	4 cut(s)	53, 134, 215, 684
HpyAV	CCTTC	7 cut(s)	734, 1050, 1151, 1421, 1462, 1643, 1864
HpyCH4III	ACNGT	8 cut(s)	116, 526, 910, 1067, 1408, 1465, 1574, 1864
HpyCH4IV	ACGT	2 cut(s)	51, 303
HpyCH4V	TGCA	6 cut(s)	73, 152, 899, 1149, 1545, 1596
HpyF10VI	GCNNNNNNNGC	6 cut(s)	32, 70, 141, 353, 650, 1214
HpyF3I	CTNAG	7 cut(s)	434, 453, 1077, 1386, 1413, 1705, 1714
HpySE526I	ACGT	2 cut(s)	51, 303
Hsp92I	GRCGYC	1 cut(s)	17
Hsp92II	CATG	7 cut(s)	124, 152, 280, 569, 580, 1057, 1912
HspAI	GCGC	2 cut(s)	947, 1724
Kpn2I	TCCGGA	1 cut(s)	1779
KpnI	GGTACC	1 cut(s)	115
Kzo9I	GATC	9 cut(s)	156, 380, 600, 673, 1416, 1439, 1527, 1701, 1857
LguI	GCTCTTC	1 cut(s)	1740
LmnI	GCTCC	2 cut(s)	212, 1782
Lsp1109I	GCAGC	3 cut(s)	178, 331, 1797
LweI	GCATC	4 cut(s)	886, 1288, 1583, 1797
MaeI	CTAG	1 cut(s)	1935
MaeII	ACGT	2 cut(s)	51, 303
MaeIII	GTNAC	6 cut(s)	658, 757, 1126, 1459, 1505, 1586
MalI	GATC	9 cut(s)	158, 382, 602, 675, 1418, 1441, 1529, 1703, 1859
MboI	GATC	9 cut(s)	156, 380, 600, 673, 1416, 1439, 1527, 1701, 1857
MflI	RGATCY	2 cut(s)	673, 1701
MluCI	AATT	9 cut(s)	55, 511, 856, 978, 997, 1086, 1257, 1604, 1644
MlyI	GAGTC	2 cut(s)	204, 728
MmeI	TCCRAC	3 cut(s)	153, 1089, 1231
MroI	TCCGGA	1 cut(s)	1779
MroXI	GAANNNNTTC	1 cut(s)	857
MseI	TTAA	6 cut(s)	87, 612, 1212, 1227, 1794, 1815
MslI	CAYNNNNRTG	1 cut(s)	1865
MspA1I	CMGCKG	2 cut(s)	344, 386
MspI	CCGG	4 cut(s)	5, 1105, 1692, 1780
MspR9I	CCNGG	3 cut(s)	257, 1377, 1693
MvaI	CCWGG	2 cut(s)	257, 1377
MvnI	CGCG	1 cut(s)	32
MwoI	GCNNNNNNNGC	6 cut(s)	32, 70, 141, 353, 650, 1214
NciI	CCSGG	1 cut(s)	1693
NdeI	CATATG	2 cut(s)	325, 396
NdeII	GATC	9 cut(s)	156, 380, 600, 673, 1416, 1439, 1527, 1701, 1857
NlaIII	CATG	7 cut(s)	124, 152, 280, 569, 580, 1057, 1912
NlaIV	GGNNCC	5 cut(s)	113, 208, 591, 675, 937
NmuCI	GTSAC	2 cut(s)	1459, 1586
NspI	RCATGY	2 cut(s)	152, 1912
NspV	TTCGAA	1 cut(s)	1925
OliI	CACNNNNGTG	1 cut(s)	1865
PaeI	GCATGC	1 cut(s)	152
PagI	TCATGA	2 cut(s)	576, 1053
PaqCI	CACCTGC	1 cut(s)	64
PciSI	GCTCTTC	1 cut(s)	1740
PcsI	WCGNNNNNNNCGW	1 cut(s)	1614
PdmI	GAANNNNTTC	1 cut(s)	857
PfeI	GAWTC	8 cut(s)	180, 313, 338, 430, 622, 1093, 1496, 1757
PflFI	GACNNNGTC	3 cut(s)	474, 1457, 1775
PflMI	CCANNNNNTGG	1 cut(s)	503
PfoI	TCCNGGA	1 cut(s)	1375
PinAI	ACCGGT	1 cut(s)	1104
PkrI	GCNGC	5 cut(s)	34, 47, 168, 346, 1787
PleI	GAGTC	2 cut(s)	203, 728
PpsI	GAGTC	2 cut(s)	203, 728
PshAI	GACNNNNGTC	1 cut(s)	1428
PshBI	ATTAAT	2 cut(s)	612, 1227
PsiI	TTATAA	1 cut(s)	1280
Psp6I	CCWGG	2 cut(s)	255, 1375
PspEI	GGTNACC	1 cut(s)	1126
PspFI	CCCAGC	1 cut(s)	1217
PspGI	CCWGG	2 cut(s)	255, 1375
PspN4I	GGNNCC	5 cut(s)	113, 208, 591, 675, 937
PspPI	GGNCC	5 cut(s)	329, 506, 569, 913, 1102
PsuI	RGATCY	2 cut(s)	673, 1701
PsyI	GACNNNGTC	3 cut(s)	474, 1457, 1775
PvuII	CAGCTG	2 cut(s)	344, 386
RsaI	GTAC	6 cut(s)	113, 230, 426, 1306, 1730, 1742
RsaNI	GTAC	6 cut(s)	112, 229, 425, 1305, 1729, 1741
RseI	CAYNNNNRTG	1 cut(s)	1865
SapI	GCTCTTC	1 cut(s)	1740
SaqAI	TTAA	6 cut(s)	87, 612, 1212, 1227, 1794, 1815
SatI	GCNGC	5 cut(s)	33, 46, 167, 345, 1786
Sau3AI	GATC	9 cut(s)	156, 380, 600, 673, 1416, 1439, 1527, 1701, 1857
Sau96I	GGNCC	5 cut(s)	329, 506, 569, 913, 1102
SchI	GAGTC	2 cut(s)	204, 728
ScrFI	CCNGG	3 cut(s)	257, 1377, 1693
SfaNI	GCATC	4 cut(s)	886, 1288, 1583, 1797
SfcI	CTRYAG	1 cut(s)	1621
SfuI	TTCGAA	1 cut(s)	1925
SinI	GGWCC	3 cut(s)	329, 913, 1102
SmiMI	CAYNNNNRTG	1 cut(s)	1865
SmlI	CTYRAG	1 cut(s)	1309
SmoI	CTYRAG	1 cut(s)	1309
SphI	GCATGC	1 cut(s)	152
Sse9I	AATT	9 cut(s)	55, 511, 856, 978, 997, 1086, 1257, 1604, 1644
SsiI	CCGC	4 cut(s)	32, 45, 253, 784
SspMI	CTAG	1 cut(s)	1935
StyD4I	CCNGG	3 cut(s)	255, 1375, 1691
TaaI	ACNGT	8 cut(s)	116, 526, 910, 1067, 1408, 1465, 1574, 1864
TaiI	ACGT	2 cut(s)	54, 306
TaqI	TCGA	7 cut(s)	81, 517, 723, 1559, 1608, 1914, 1925
TaqII	GACCGA	2 cut(s)	192, 1341
TasI	AATT	9 cut(s)	55, 511, 856, 978, 997, 1086, 1257, 1604, 1644
TatI	WGTACW	3 cut(s)	228, 424, 1728
TauI	GCSGC	2 cut(s)	35, 48
TfiI	GAWTC	8 cut(s)	180, 313, 338, 430, 622, 1093, 1496, 1757
Tru1I	TTAA	6 cut(s)	87, 612, 1212, 1227, 1794, 1815
Tru9I	TTAA	6 cut(s)	87, 612, 1212, 1227, 1794, 1815
TscAI	CASTG	6 cut(s)	376, 1243, 1468, 1547, 1579, 1663
TseFI	GTSAC	2 cut(s)	1459, 1586
TseI	GCWGC	3 cut(s)	166, 344, 1785
Tsp45I	GTSAC	2 cut(s)	1459, 1586
TspDTI	ATGAA	6 cut(s)	109, 470, 593, 942, 1250, 1770
TspGWI	ACGGA	3 cut(s)	199, 613, 1509
TspRI	CASTG	6 cut(s)	376, 1243, 1468, 1547, 1579, 1663
Tth111I	GACNNNGTC	3 cut(s)	474, 1457, 1775
Van91I	CCANNNNNTGG	1 cut(s)	503
VpaK11BI	GGWCC	3 cut(s)	329, 913, 1102
VspI	ATTAAT	2 cut(s)	612, 1227
XapI	RAATTY	6 cut(s)	55, 511, 856, 1086, 1604, 1644
XceI	RCATGY	2 cut(s)	152, 1912
XmnI	GAANNNNTTC	1 cut(s)	857
XspI	CTAG	1 cut(s)	1935

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.