Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0007915

Physical Location & Seq

Genomic Coordinates Reverse (-)

5112263 .. 5120699

Gene Structure 8437 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g09540.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGCGACCAAGCCCGGCGTTCCGAGATCCGGAGCTATTTCCAAGGGCTACAACTTCTCCACTCACTGGGAACAGAACACGCCGTTAACGGAGCAGCAGCAAGCGGCGATTTCAAATCTCGCTCACGCCGTCGCGGAGCGACCGTTGCCGCCAAATTTGGCGCAAGATCGAATCTCGGAGCAGCAGAATGGCTTGACAGTCTCCACCAAGGACAGCTCGTTCGGCTTGGAACACTCTGCTGCTATGGAAGCCGTCCTTGTCAATACGAATGAGTTTTACAAATGGTTTACGGATCTTGAATCGGCCTTGAAGTCTGAGACAGAGGAGAAGTATCGCCACTATGTAGACACGTTGATGGAGCGCATACAGATATGTGATGGTATACTCCAGCAGGTGGATGATACTCTAGACTTGTTTAATGAACTACAACTGCAGCACCAAGCAGTAGCAACGAAGACTAAAACTCTTCATGATGCGTGCGATCGACTGTTGATAGAAAAGCAACGACTGATTGAGTTTTCAGAGGCTCTCCGCAGTAAGCTCAACTACTTTGATGAATTGGAGAATATATCTACAAATTTTTACTCTCCAAACATGAATGTTCTAAATGAGAACTTCCTCCCTCTGCTCAAACGACTTGATGATTGCATAACGTATGTTGAAAGCAATCCGCAATATGCAGAATCCAGTGTATACCTACTCAAATTTCGCCAACTGCAGTCTCGAGCCTTGGGCATGATTCGTTCACATGTACTTGCAATTCTTAAAAGTGCTTCTTCTCAGGTACAGGCAGCTATTGGAAGCAGTGGTGGCAGCAAAGCTTCTGTTTCTGAGGGTGTAGAAGCATCTGTTATTTATGTCCGTTTCAAGGCTGCAGCAAGTGAGCTTAAGCCAGTGCTGGAGGAAATTGAAAGTAGAGCATCGAGGAAAGAGTATACTCAGATCCTTGCAGAATGTCACAAGCTGTACTGCGAACAGCGCCTTTCCTTGGTAAGAGGTATAGTACATCAAAGAATATCTGAATTCGCCAAGAAAGAGGCATTGCCATCATTGACAAGATCTGGATGTGCATATCTAATGCAGGTCTGTCAGCTTGAGCACCAACTTTTTGACCACTTTTTCCCATCTTCCGCAGAGGACGTTTCAAGCTTGGCTCCATTGATAGATCCTCTGTCTACATATTTATACGATACACTACGGCCAAAGCTTATTCACGAAACAAATATTGATTCTCTTTGCGAACTTGTTGATATATTGAAAGTTGAAGTGCTAGGTGAACAGTTGAGTCGGCGGAGTGAATCATTAGCCGGTCTACGGCCTACACTGGAGAGAATTCTTGCTGATGTTCATGAGCGGTTGACTTTCCGTGCTCGAACACATATTCGTGATGAAATATCAAACTATTTACCTTTGGATGAAGATTTGGATTACCCTGCAAAGCTGGAAAAGGCCGCGACAGATGAACTTGAAACTACATCTGATGATGAAAACCTTGTTTTCAAGACCTGGTATCCACCTCTAGAGAAAACACTATCGTGTCTTTCAAAGCTGTATCGCTGCTTAGAACCAGAAGTTTTCACTGGTTTAGCACAGGAAGTTGTCGAAGTTTGTTCAATATCAATTCAGAAAGCGAGTAAGCTGATTTCAAAGAGATCATCACCAATGGATGGTCAGCTCTTCCTCATAAAGCATCTTCTTATCTTGAGGGAGAAGATTGCACCTTTCGATATTGAGTTTTCTGTTACACACAAGGAACTTGACTTCTCACACTTGCTGGAGCATCTACGGCGGATTCTTAGAGGTCAAGCCTCTCTATTTGACTGGTCCCGGACAACTTCACTGGCAAGAACCTTGTCTCCCCGTGTTTTGGAAAGTCAGATAGATGCCAAGAAGGAACTGGAGAAAAGCCTAAAAGCCACCTGTGAGGAATTCATAATGTCGGTCACGAAGCTAGTTGTGGATCCCATGCTTTCATTTGTTACTAAGGTCACAGCTGTGAAAGTTGCAATGTCAGGCAGCCAGAATCAAAAGGGAGAGTTGGTTATGGCTAAACCACTCAAAGATCAAGCTTTTGCAACTCCGGATAAAGTAGCTGAACTTGTTCAAAAGTTGATCTGTACCATATATCTGGAACAGGTAACCACTGCTATTCAACAAGAGTTGCCAATGGTAATGAGGAAAATGAAGCTTTATCTGCAGAACTCAGAAACGCGGAAAATTCTATTCAAACCAATACAGACAAATATTGTTGAAGCCCATGTACAAGTACTGTCCCTCCTCAAGGCCGAATATTCACCTGAAGAGATACAAGGAATGATAAAGATGCCTTCTATTCAAGACCTGCAGGCACAACTCGATACTCTACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006464 GO:0006486 GO:0006807 GO:0006810 GO:0006888 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008152 GO:0008565 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0017119 GO:0019538 GO:0031090 GO:0031647 GO:0031984 GO:0032588 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0034645 GO:0036211 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0050821 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0065007 GO:0065008 GO:0070085 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098588 GO:0098791 GO:0099023 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec34

Protein Analysis

790

Amino Acids

89.41

Weight (kDa)

5.7

Isoelectric Point (pI)

47.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG3_N	PF04136	114 - 256	4.9e-43	Conserved oligomeric Golgi complex subunit 3, N-terminal
COG3_C	PF20671	283 - 591	9.9e-106	Conserved oligomeric Golgi complex subunit 3, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73430 AT1G73430
fragaria_vesca	FvH4_1g09540 FvH4_1g09540 FvH4_1g09540 FvH4_1g09540 FvH4_1g09540
malus_domestica	MD02G1104000.v1.1 MD15G1224400.v1.1
prunus_persica	Prupe.7G190900_v2.0.a1
pyrus_communis	pycom02g08190 pycom15g19960
rosa_chinensis	RchiOBHm_Chr2g0096121 RchiOBHm_Chr2g0096281
rosa_laevigata	RLG00000016627
rosa_multiflora	Rmu_sc0005996.1_g000008
rosa_roxburghii	Rroxscaffold_2G00145730
rosa_rugosa	Rorug02G0057400
rosa_samantha	Rh2AG104200 Rh2BG106300 Rh2CG108200 Rh2DG106900 Rh2DG107000
rosa_wichuraiana	Rw2G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	382
Acc36I	ACCTGC	3 cut(s)	382, 1072, 2349
AccB7I	CCANNNNNTGG	3 cut(s)	66, 394, 1667
AccBSI	CCGCTC	1 cut(s)	1354
AccI	GTMKAC	6 cut(s)	345, 382, 693, 935, 1175, 1312
AccII	CGCG	3 cut(s)	134, 1454, 2212
AccIII	TCCGGA	2 cut(s)	29, 2080
AclWI	GGATC	6 cut(s)	21, 300, 937, 1160, 1955, 1968
AcoI	YGGCCR	1 cut(s)	1199
AcsI	RAATTY	7 cut(s)	154, 577, 704, 1022, 1332, 1928, 2217
AcuI	CTGAAG	1 cut(s)	2319
AfaI	GTAC	7 cut(s)	753, 786, 968, 1005, 2119, 2262, 2268
AfiI	CCNNNNNNNGG	9 cut(s)	29, 66, 394, 868, 988, 1314, 1667, 1867, 2281
AflII	CTTAAG	1 cut(s)	887
AflIII	ACRYGT	2 cut(s)	348, 748
AjnI	CCWGG	1 cut(s)	1505
AleI	CACNNNNGTG	2 cut(s)	1534, 1994
AloI	GAACNNNNNNTCC	4 cut(s)	203, 235, 1840, 1872
Alw21I	GWGCWC	2 cut(s)	1101, 1372
Alw26I	GTCTC	4 cut(s)	205, 311, 726, 1860
AlwI	GGATC	6 cut(s)	21, 300, 937, 1160, 1955, 1968
Ama87I	CYCGRG	1 cut(s)	723
Aor13HI	TCCGGA	2 cut(s)	29, 2080
AoxI	GGCC	5 cut(s)	303, 1199, 1316, 1449, 2283
ApoI	RAATTY	7 cut(s)	154, 577, 704, 1022, 1332, 1928, 2217
ArsI	GACNNNNNNTTYG	2 cut(s)	203, 235
Asp700I	GAANNNNTTC	1 cut(s)	2100
AspLEI	GCGC	3 cut(s)	163, 363, 981
AspS9I	GGNCC	1 cut(s)	1824
AsuC2I	CCSGG	2 cut(s)	15, 1828
AsuHPI	GGTGA	3 cut(s)	1286, 1650, 2286
AvaI	CYCGRG	1 cut(s)	723
AvaII	GGWCC	1 cut(s)	1824
BamHI	GGATCC	1 cut(s)	1960
BarI	GAAGNNNNNNTAC	2 cut(s)	2244, 2276
BbsI	GAAGAC	1 cut(s)	461
Bbv12I	GWGCWC	2 cut(s)	1101, 1372
BccI	CCATC	5 cut(s)	349, 371, 1054, 1132, 1661
BceAI	ACGGC	6 cut(s)	67, 113, 236, 1214, 1331, 1802
BciT130I	CCWGG	1 cut(s)	1507
BciVI	GTATCC	1 cut(s)	1521
BcnI	CCSGG	2 cut(s)	15, 1828
BcoDI	GTCTC	4 cut(s)	205, 311, 726, 1860
BfaI	CTAG	5 cut(s)	407, 1271, 1520, 1952, 2368
BfmI	CTRYAG	5 cut(s)	431, 716, 873, 2195, 2342
BfoI	RGCGCY	1 cut(s)	982
BfrI	CTTAAG	1 cut(s)	887
BfuAI	ACCTGC	3 cut(s)	382, 1072, 2349
BfuI	GTATCC	1 cut(s)	1521
BglII	AGATCT	1 cut(s)	1058
BmcAI	AGTACT	1 cut(s)	2268
Bme1390I	CCNGG	3 cut(s)	15, 1507, 1828
Bme18I	GGWCC	1 cut(s)	1824
BmeT110I	CYCGRG	1 cut(s)	723
BmgT120I	GGNCC	1 cut(s)	1824
BmiI	GGNNCC	3 cut(s)	1155, 1826, 1962
BmrFI	CCNGG	3 cut(s)	15, 1507, 1828
BmrI	ACTGGG	1 cut(s)	76
BmsI	GCATC	7 cut(s)	463, 854, 929, 1699, 1789, 1873, 2313
BmuI	ACTGGG	1 cut(s)	76
BpiI	GAAGAC	1 cut(s)	461
BpmI	CTGGAG	5 cut(s)	371, 920, 1346, 1796, 1919
BpuEI	CTTGAG	3 cut(s)	1115, 1723, 2264
BpuMI	CCSGG	2 cut(s)	15, 1828
BsaJI	CCNNGG	4 cut(s)	42, 207, 729, 987
BsaWI	WCCGGW	2 cut(s)	29, 2080
Bsc4I	CCNNNNNNNGG	9 cut(s)	29, 66, 394, 868, 988, 1314, 1667, 1867, 2281
Bse118I	RCCGGY	1 cut(s)	1307
Bse1I	ACTGG	8 cut(s)	71, 687, 893, 1329, 1585, 1826, 1845, 1902
Bse3DI	GCAATG	2 cut(s)	1040, 2013
BseAI	TCCGGA	2 cut(s)	29, 2080
BseBI	CCWGG	1 cut(s)	1507
BseDI	CCNNGG	4 cut(s)	42, 207, 729, 987
BseGI	GGATG	4 cut(s)	403, 1070, 1420, 1672
BseLI	CCNNNNNNNGG	9 cut(s)	29, 66, 394, 868, 988, 1314, 1667, 1867, 2281
BseMI	GCAATG	2 cut(s)	1040, 2013
BseMII	CTCAG	5 cut(s)	306, 794, 822, 953, 2217
BseNI	ACTGG	8 cut(s)	71, 687, 893, 1329, 1585, 1826, 1845, 1902
BseRI	GAGGAG	2 cut(s)	338, 2267
Bsh1236I	CGCG	3 cut(s)	134, 1454, 2212
Bsh1285I	CGRYCG	2 cut(s)	143, 484
BshFI	GGCC	5 cut(s)	305, 1201, 1318, 1451, 2285
BsiEI	CGRYCG	2 cut(s)	143, 484
BsiHKAI	GWGCWC	2 cut(s)	1101, 1372
BsiHKCI	CYCGRG	1 cut(s)	723
BsiSI	CCGG	5 cut(s)	15, 30, 1308, 1828, 2081
BslFI	GGGAC	2 cut(s)	1810, 2257
BslI	CCNNNNNNNGG	9 cut(s)	29, 66, 394, 868, 988, 1314, 1667, 1867, 2281
BsmAI	GTCTC	4 cut(s)	205, 311, 726, 1860
BsmFI	GGGAC	2 cut(s)	1810, 2257
BsnI	GGCC	5 cut(s)	305, 1201, 1318, 1451, 2285
BsoBI	CYCGRG	1 cut(s)	723
Bsp1286I	GDGCHC	2 cut(s)	1101, 1372
Bsp13I	TCCGGA	2 cut(s)	29, 2080
Bsp1407I	TGTACA	1 cut(s)	2260
BspANI	GGCC	5 cut(s)	305, 1201, 1318, 1451, 2285
BspCNI	CTCAG	5 cut(s)	307, 793, 823, 952, 2216
BspEI	TCCGGA	2 cut(s)	29, 2080
BspFNI	CGCG	3 cut(s)	134, 1454, 2212
BspHI	TCATGA	2 cut(s)	469, 1348
BspLI	GGNNCC	3 cut(s)	1155, 1826, 1962
BspMAI	CTGCAG	5 cut(s)	435, 720, 877, 2199, 2346
BspMI	ACCTGC	3 cut(s)	382, 1072, 2349
BspPI	GGATC	6 cut(s)	21, 300, 937, 1160, 1955, 1968
BspQI	GCTCTTC	1 cut(s)	1682
BspTI	CTTAAG	1 cut(s)	887
BsrBI	CCGCTC	1 cut(s)	1354
BsrDI	GCAATG	2 cut(s)	1040, 2013
BsrFI	RCCGGY	1 cut(s)	1307
BsrGI	TGTACA	1 cut(s)	2260
BsrI	ACTGG	8 cut(s)	71, 687, 893, 1329, 1585, 1826, 1845, 1902
BssAI	RCCGGY	1 cut(s)	1307
BssECI	CCNNGG	4 cut(s)	42, 207, 729, 987
BssNAI	GTATAC	3 cut(s)	383, 694, 936
BssT1I	CCWWGG	4 cut(s)	42, 207, 729, 987
Bst1107I	GTATAC	3 cut(s)	383, 694, 936
Bst2UI	CCWGG	1 cut(s)	1507
Bst4CI	ACNGT	5 cut(s)	144, 199, 489, 1281, 2271
Bst6I	CTCTTC	3 cut(s)	471, 1682, 2295
BstAFI	CTTAAG	1 cut(s)	887
BstAUI	TGTACA	1 cut(s)	2260
BstC8I	GCNNGC	3 cut(s)	102, 478, 2346
BstDEI	CTNAG	8 cut(s)	315, 780, 831, 939, 1561, 1796, 1983, 2203
BstEII	GGTNACC	1 cut(s)	2137
BstENI	CCTNNNNNAGG	1 cut(s)	2279
BstF5I	GGATG	4 cut(s)	403, 1070, 1420, 1672
BstFNI	CGCG	3 cut(s)	134, 1454, 2212
BstH2I	RGCGCY	1 cut(s)	982
BstHHI	GCGC	3 cut(s)	163, 363, 981
BstMAI	GTCTC	4 cut(s)	205, 311, 726, 1860
BstMCI	CGRYCG	2 cut(s)	143, 484
BstMWI	GCNNNNNNNGC	7 cut(s)	145, 222, 248, 810, 978, 1786, 2194
BstNI	CCWGG	1 cut(s)	1507
BstNSI	RCATGY	1 cut(s)	752
BstPI	GGTNACC	1 cut(s)	2137
BstSCI	CCNGG	3 cut(s)	13, 1505, 1826
BstSFI	CTRYAG	5 cut(s)	431, 716, 873, 2195, 2342
BstUI	CGCG	3 cut(s)	134, 1454, 2212
BstV2I	GAAGAC	1 cut(s)	461
BstX2I	RGATCY	6 cut(s)	26, 292, 942, 1058, 1165, 1960
BstXI	CCANNNNNNTGG	1 cut(s)	2128
BstYI	RGATCY	6 cut(s)	26, 292, 942, 1058, 1165, 1960
BstZ17I	GTATAC	3 cut(s)	383, 694, 936
BsuI	GTATCC	1 cut(s)	1521
BsuRI	GGCC	5 cut(s)	305, 1201, 1318, 1451, 2285
BtsCI	GGATG	4 cut(s)	403, 1070, 1420, 1672
BtsI	GCAGTG	2 cut(s)	811, 2142
BtsIMutI	CAGTG	8 cut(s)	64, 694, 811, 900, 1322, 1578, 1838, 2142
BveI	ACCTGC	3 cut(s)	382, 1072, 2349
Cac8I	GCNNGC	3 cut(s)	102, 478, 2346
CciI	TCATGA	2 cut(s)	469, 1348
CfoI	GCGC	3 cut(s)	163, 363, 981
Cfr10I	RCCGGY	1 cut(s)	1307
Cfr13I	GGNCC	1 cut(s)	1824
CsiI	ACCWGGT	1 cut(s)	1505
Csp6I	GTAC	7 cut(s)	752, 785, 967, 1004, 2118, 2261, 2267
CviAII	CATG	7 cut(s)	470, 595, 736, 749, 1349, 1966, 2258
CviQI	GTAC	7 cut(s)	752, 785, 967, 1004, 2118, 2261, 2267
DdeI	CTNAG	8 cut(s)	315, 780, 831, 939, 1561, 1796, 1983, 2203
EaeI	YGGCCR	1 cut(s)	1199
Eam1104I	CTCTTC	3 cut(s)	471, 1682, 2295
EarI	CTCTTC	3 cut(s)	471, 1682, 2295
EciI	GGCGGA	2 cut(s)	1306, 1804
Eco130I	CCWWGG	4 cut(s)	42, 207, 729, 987
Eco47I	GGWCC	1 cut(s)	1824
Eco57I	CTGAAG	1 cut(s)	2319
Eco88I	CYCGRG	1 cut(s)	723
Eco91I	GGTNACC	1 cut(s)	2137
EcoNI	CCTNNNNNAGG	1 cut(s)	2279
EcoO65I	GGTNACC	1 cut(s)	2137
EcoRI	GAATTC	3 cut(s)	1022, 1332, 1928
EcoRII	CCWGG	1 cut(s)	1505
EcoT14I	CCWWGG	4 cut(s)	42, 207, 729, 987
ErhI	CCWWGG	4 cut(s)	42, 207, 729, 987
FaeI	CATG	7 cut(s)	473, 598, 739, 752, 1352, 1969, 2261
FalI	AAGNNNNNCTT	4 cut(s)	240, 272, 760, 792
FaqI	GGGAC	2 cut(s)	1810, 2257
FatI	CATG	7 cut(s)	469, 594, 735, 748, 1348, 1965, 2257
FblI	GTMKAC	6 cut(s)	345, 382, 693, 935, 1175, 1312
FokI	GGATG	4 cut(s)	410, 1077, 1427, 1679
FspBI	CTAG	5 cut(s)	407, 1271, 1520, 1952, 2368
GlaI	GCGC	3 cut(s)	162, 362, 980
GsuI	CTGGAG	5 cut(s)	371, 920, 1346, 1796, 1919
HaeII	RGCGCY	1 cut(s)	982
HaeIII	GGCC	5 cut(s)	305, 1201, 1318, 1451, 2285
HapII	CCGG	5 cut(s)	15, 30, 1308, 1828, 2081
HhaI	GCGC	3 cut(s)	163, 363, 981
Hin1II	CATG	7 cut(s)	473, 598, 739, 752, 1352, 1969, 2261
Hin6I	GCGC	3 cut(s)	161, 361, 979
HinP1I	GCGC	3 cut(s)	161, 361, 979
HincII	GTYRAC	2 cut(s)	87, 1359
HindII	GTYRAC	2 cut(s)	87, 1359
HindIII	AAGCTT	5 cut(s)	819, 1147, 1205, 2067, 2186
HinfI	GANTC	9 cut(s)	171, 299, 683, 739, 1229, 1285, 1298, 1792, 2023
HpaI	GTTAAC	1 cut(s)	87
HpaII	CCGG	5 cut(s)	15, 30, 1308, 1828, 2081
HphI	GGTGA	3 cut(s)	1286, 1650, 2286
Hpy99I	CGWCG	1 cut(s)	134
HpyAV	CCTTC	2 cut(s)	1885, 2337
HpyCH4III	ACNGT	5 cut(s)	144, 199, 489, 1281, 2271
HpyCH4IV	ACGT	3 cut(s)	350, 653, 1140
HpyF10VI	GCNNNNNNNGC	7 cut(s)	145, 222, 248, 810, 978, 1786, 2194
HpyF3I	CTNAG	8 cut(s)	315, 780, 831, 939, 1561, 1796, 1983, 2203
HpySE526I	ACGT	3 cut(s)	350, 653, 1140
Hsp92II	CATG	7 cut(s)	473, 598, 739, 752, 1352, 1969, 2261
HspAI	GCGC	3 cut(s)	161, 361, 979
Kpn2I	TCCGGA	2 cut(s)	29, 2080
KspAI	GTTAAC	1 cut(s)	87
LguI	GCTCTTC	1 cut(s)	1682
LmnI	GCTCC	7 cut(s)	32, 91, 136, 178, 358, 1159, 1777
LweI	GCATC	7 cut(s)	463, 854, 929, 1699, 1789, 1873, 2313
MabI	ACCWGGT	1 cut(s)	1505
MaeI	CTAG	5 cut(s)	407, 1271, 1520, 1952, 2368
MaeII	ACGT	3 cut(s)	350, 653, 1140
MaeIII	GTNAC	6 cut(s)	956, 1741, 1942, 1978, 1987, 2137
MbiI	CCGCTC	1 cut(s)	1354
MboII	GAAGA	9 cut(s)	458, 466, 768, 1119, 1430, 1669, 1685, 1723, 2312
MflI	RGATCY	6 cut(s)	26, 292, 942, 1058, 1165, 1960
MhlI	GDGCHC	2 cut(s)	1101, 1372
MlyI	GAGTC	1 cut(s)	1294
MroI	TCCGGA	2 cut(s)	29, 2080
MroXI	GAANNNNTTC	1 cut(s)	2100
MseI	TTAA	4 cut(s)	86, 417, 765, 888
MslI	CAYNNNNRTG	4 cut(s)	353, 1383, 1534, 1994
MspA1I	CMGCKG	1 cut(s)	1994
MspCI	CTTAAG	1 cut(s)	887
MspI	CCGG	5 cut(s)	15, 30, 1308, 1828, 2081
MspR9I	CCNGG	3 cut(s)	15, 1507, 1828
MvaI	CCWGG	1 cut(s)	1507
MvnI	CGCG	3 cut(s)	134, 1454, 2212
MwoI	GCNNNNNNNGC	7 cut(s)	145, 222, 248, 810, 978, 1786, 2194
NciI	CCSGG	2 cut(s)	15, 1828
NlaIII	CATG	7 cut(s)	473, 598, 739, 752, 1352, 1969, 2261
NlaIV	GGNNCC	3 cut(s)	1155, 1826, 1962
NmuCI	GTSAC	3 cut(s)	956, 1942, 1987
NspI	RCATGY	1 cut(s)	752
OliI	CACNNNNGTG	2 cut(s)	1534, 1994
PaeR7I	CTCGAG	1 cut(s)	723
PagI	TCATGA	2 cut(s)	469, 1348
PaqCI	CACCTGC	1 cut(s)	382
PciI	ACATGT	1 cut(s)	748
PciSI	GCTCTTC	1 cut(s)	1682
PcsI	WCGNNNNNNNCGW	1 cut(s)	126
PdmI	GAANNNNTTC	1 cut(s)	2100
PfeI	GAWTC	8 cut(s)	171, 299, 683, 739, 1229, 1298, 1792, 2023
PflMI	CCANNNNNTGG	3 cut(s)	66, 394, 1667
PfoI	TCCNGGA	1 cut(s)	1826
Ple19I	CGATCG	1 cut(s)	484
PleI	GAGTC	1 cut(s)	1293
PpsI	GAGTC	1 cut(s)	1293
PscI	ACATGT	1 cut(s)	748
Psp6I	CCWGG	1 cut(s)	1505
PspEI	GGTNACC	1 cut(s)	2137
PspGI	CCWGG	1 cut(s)	1505
PspN4I	GGNNCC	3 cut(s)	1155, 1826, 1962
PspPI	GGNCC	1 cut(s)	1824
PstI	CTGCAG	5 cut(s)	435, 720, 877, 2199, 2346
PsuI	RGATCY	6 cut(s)	26, 292, 942, 1058, 1165, 1960
PvuI	CGATCG	1 cut(s)	484
PvuII	CAGCTG	1 cut(s)	1994
RsaI	GTAC	7 cut(s)	753, 786, 968, 1005, 2119, 2262, 2268
RsaNI	GTAC	7 cut(s)	752, 785, 967, 1004, 2118, 2261, 2267
RseI	CAYNNNNRTG	4 cut(s)	353, 1383, 1534, 1994
SapI	GCTCTTC	1 cut(s)	1682
SaqAI	TTAA	4 cut(s)	86, 417, 765, 888
Sau96I	GGNCC	1 cut(s)	1824
SbfI	CCTGCAGG	1 cut(s)	2346
ScaI	AGTACT	1 cut(s)	2268
SchI	GAGTC	1 cut(s)	1294
ScrFI	CCNGG	3 cut(s)	15, 1507, 1828
SdaI	CCTGCAGG	1 cut(s)	2346
SduI	GDGCHC	2 cut(s)	1101, 1372
SexAI	ACCWGGT	1 cut(s)	1505
SfaNI	GCATC	7 cut(s)	463, 854, 929, 1699, 1789, 1873, 2313
SfcI	CTRYAG	5 cut(s)	431, 716, 873, 2195, 2342
Sfr274I	CTCGAG	1 cut(s)	723
SinI	GGWCC	1 cut(s)	1824
SlaI	CTCGAG	1 cut(s)	723
SmiMI	CAYNNNNRTG	4 cut(s)	353, 1383, 1534, 1994
SmlI	CTYRAG	5 cut(s)	723, 887, 1094, 1702, 2279
SmoI	CTYRAG	5 cut(s)	723, 887, 1094, 1702, 2279
Sse8387I	CCTGCAGG	1 cut(s)	2346
SspI	AATATT	3 cut(s)	1225, 2245, 2291
SspMI	CTAG	5 cut(s)	407, 1271, 1520, 1952, 2368
StyD4I	CCNGG	3 cut(s)	13, 1505, 1826
StyI	CCWWGG	4 cut(s)	42, 207, 729, 987
TaaI	ACNGT	5 cut(s)	144, 199, 489, 1281, 2271
TaiI	ACGT	3 cut(s)	353, 656, 1143
TaqI	TCGA	8 cut(s)	169, 484, 724, 923, 1372, 1602, 1725, 2355
TaqII	GACCGA	1 cut(s)	1930
TatI	WGTACW	5 cut(s)	751, 966, 1003, 2260, 2266
TauI	GCSGC	3 cut(s)	107, 151, 1454
TfiI	GAWTC	8 cut(s)	171, 299, 683, 739, 1229, 1298, 1792, 2023
Tru1I	TTAA	4 cut(s)	86, 417, 765, 888
Tru9I	TTAA	4 cut(s)	86, 417, 765, 888
TscAI	CASTG	8 cut(s)	71, 694, 811, 900, 1329, 1585, 1845, 2149
TseFI	GTSAC	3 cut(s)	956, 1942, 1987
Tsp45I	GTSAC	3 cut(s)	956, 1942, 1987
TspGWI	ACGGA	4 cut(s)	104, 305, 851, 1355
TspRI	CASTG	8 cut(s)	71, 694, 811, 900, 1329, 1585, 1845, 2149
Van91I	CCANNNNNTGG	3 cut(s)	66, 394, 1667
Vha464I	CTTAAG	1 cut(s)	887
VpaK11BI	GGWCC	1 cut(s)	1824
XagI	CCTNNNNNAGG	1 cut(s)	2279
XapI	RAATTY	7 cut(s)	154, 577, 704, 1022, 1332, 1928, 2217
XbaI	TCTAGA	2 cut(s)	406, 1519
XceI	RCATGY	1 cut(s)	752
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1894
XhoI	CTCGAG	1 cut(s)	723
XmiI	GTMKAC	6 cut(s)	345, 382, 693, 935, 1175, 1312
XmnI	GAANNNNTTC	1 cut(s)	2100
XspI	CTAG	5 cut(s)	407, 1271, 1520, 1952, 2368
ZrmI	AGTACT	1 cut(s)	2268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.