Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0007915

Physical Location & Seq

Genomic Coordinates Reverse (-)

8306771 .. 8319753

Gene Structure 12983 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1104000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGCGGCAACCAAACCCGGCGTTCCGAAATCTGGAGCCATTTCCAAGGGCTACAACTTCGCATCTCACTGGGAACAGAAAACTCCGTTATCAGAGCAGCAGCAAGCGGCCATTACAACGCTCTCGCATTGCGTTGCAGAGCGGCCGTTCCCACCCAATTTGGCTCAGGACGGCACCACAGGCCACCAGAATGGCCTAACTGTCTCCACCAAGGACAGCACTTTCGGCTTGGAACACTCCGCTGCCATTGAAGCTGTTCTTGTCAATACGAATCAGTTTTACAAATGGTTTACAGATCTTGAAGCAGCATTGAAGTCGGAGACAGAGGAGAAGTATCGACACTATGTAGACACTTTGACAGAACGCATTCAGACATGTGATGGCATACTCGGTCAGGTGGCTGACACCCTAGAGTTGTTTAATGAACTACAGAACCAGCATCAAGCAGTAGCAACAAAGACTAGAACTCTTCACGATGCTTGCGATAGACTGTTAATAGAGAAACAACGGCTGATTGAGTTTTCAGAAGCACTCCGTAGTAAGCTCAACTACTTTGATGAATTGGAGAATATTACTACCAATTTTTATTCTCCAAACATGAATGTTCTGCACGAGAACTTTCTCCCTCTTCTCAAACGCCTTGATGAGTGCATATCGTACGTCGAAAGCAATCCACAGTATGCAGAATCCAGTGTTTACCTGCTCAAATTTCGACAATTGCAGTCTCGAGCCTTGGGAATGATTCGTTCTCATGTACTTTCAGTTCTCAAAGGTGCTTCTTCTCAGGTACAAGCAGCTATCCGGAGCAGTGGTGGCAATAACACATCTGTTTCTGAGGGTGTAGAAGCATCGGTTATATATGTCCGTTTCAAGGCAGCAGCAAGTGAGCTTAAGCCAGTGCTGGAGGAAATTGAAAGCAGAGCATCAAGGAAAGAATATACTCAGATCCTTACAGAATGCCACAAACTATACTGTGAACAGAGACTTTCGTTGGTAAGAGGTATAGTACATCAACGAATATCCGAATTCGCGAAGAAAGAGGCCTTGCCATCACTGACTAGATCTGGATGTGCATATCTAATGCAGGTCTGCCAGCTAGAGCACCAACTTTTTGTTCATTTTTTTCCATCTTCTGCAGAGGACGTTTCAAGTTTGGCTCCATTGATAGATCCTATGTCTACATATTTATATGATACACTGCGGCCAAAACTTATTCATGAAACAAATGTTGATTTTCTTTGTGAACTTGTTGATATATTGAAAGCTGAAGTCCTAGGTGAACAGTTAAGTCGGAGGACTGAATCATTAGCTGGTCTACGTCCTACATTAGAGAGAATTCTTGCCGATGTTCATGAGCGGTTAACTTTCCGTGCTCGAACACATATTCGTGATGAGATAGCAAATTATTTTCCTCTGGATGAAGACTTGGATTACCCTGCAAAGCTGGAAGGATCTGCGGCACATCAACTTGAAACTACTTCTGCTGATGAAAACCTTGTTTTTAAAACATGGTATCCACCTCTAGAGAAAACGATATCTTGCCTTTCAAAGTTGTATCGCTGTTTAGAACCAGAAGTTTTTACTGGTTTAGCACAGGAAGTAGTTGAAGTTTGTTCAGAATCTATCCAGAAAGCGGGCAAACTCATCACAAAGAGATCATCCCCAATGGACGGTCAGCTTTTCCTCTTAAAGCATCTTCTTATCTTAAGGGAGCAGATTGCGCCTTTTGATATTGAGTTTTCTGTCACACATAAGGAACTTGATTTCTCGCACTTGCTGGAGCATCTAAGACGAATTCTTAGAGGTCAAGCCTCTCTATCTGATTGGTCCAGGTCAACTTCACTAGCAAGAACACTATCTCCCCGAGTTTTAGAAAGTCAAATAGATGCCAAAAAGGAATTGGAGAAAAGCCTGAAAACCACTGGTGAGGAGTTCATTATGTCTGTGACGAAGCTAGTTGTGGATCCTATGCTTTCATTTATTACCAAGGTCACAGCTGTGAAAGCTAGTCAGAATCCAAAGGTAGAGTCGGTTATGTCCAAACCAATAAAAGATCAAGCTTTTGCAACCCCGGATAAGGTGGCAGAACTTGTTCAAAAGGTAGCTGCTGCAATTCAGCAAGAGTTGCCAATGGTAATGACGAAAATGAAGCTTTATTTGCAGAACCCATATACACGAACTATACTGTTCAAAGCTATAAAGACAAATATTGTCGAAGCACATGTTCGAGTACAGACCCTGCTGAAGGACGAGTATTCAGCGGAAGAGGTACAAGGCATCATACACATGCCTTCCATACAAGAACTACATGCACAACTTGATAATCTCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006464 GO:0006486 GO:0006807 GO:0006810 GO:0006888 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008152 GO:0008565 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0017119 GO:0019538 GO:0031090 GO:0031647 GO:0031984 GO:0032588 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0034645 GO:0036211 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0050821 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0065007 GO:0065008 GO:0070085 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098588 GO:0098791 GO:0099023 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec34

Protein Analysis

778

Amino Acids

87.77

Weight (kDa)

6.05

Isoelectric Point (pI)

44.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG3_N	PF04136	115 - 257	1.3e-44	Conserved oligomeric Golgi complex subunit 3, N-terminal
COG3_C	PF20671	284 - 592	3.7e-105	Conserved oligomeric Golgi complex subunit 3, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73430 AT1G73430
fragaria_vesca	FvH4_1g09540 FvH4_1g09540 FvH4_1g09540 FvH4_1g09540 FvH4_1g09540
malus_domestica	MD02G1104000.v1.1 MD15G1224400.v1.1
prunus_persica	Prupe.7G190900_v2.0.a1
pyrus_communis	pycom02g08190 pycom15g19960
rosa_chinensis	RchiOBHm_Chr2g0096121 RchiOBHm_Chr2g0096281
rosa_laevigata	RLG00000016627
rosa_multiflora	Rmu_sc0005996.1_g000008
rosa_roxburghii	Rroxscaffold_2G00145730
rosa_rugosa	Rorug02G0057400
rosa_samantha	Rh2AG104200 Rh2BG106300 Rh2CG108200 Rh2DG106900 Rh2DG107000
rosa_wichuraiana	Rw2G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	708, 1075
AccB1I	GGYRCC	1 cut(s)	173
AccBSI	CCGCTC	2 cut(s)	142, 1357
AccI	GTMKAC	3 cut(s)	348, 1178, 1315
AccII	CGCG	1 cut(s)	1031
AccIII	TCCGGA	1 cut(s)	801
AciI	CCGC	9 cut(s)	5, 107, 142, 240, 1201, 1357, 1457, 1634, 2261
AclWI	GGATC	5 cut(s)	940, 1163, 1459, 1958, 1971
AcoI	YGGCCR	3 cut(s)	108, 143, 1202
AcsI	RAATTY	4 cut(s)	707, 1025, 1335, 1794
AcuI	CTGAAG	2 cut(s)	1287, 2264
AfaI	GTAC	6 cut(s)	659, 756, 789, 1008, 2232, 2271
AfiI	CCNNNNNNNGG	6 cut(s)	32, 871, 1633, 1670, 2077, 2245
AflII	CTTAAG	2 cut(s)	890, 1705
AflIII	ACRYGT	2 cut(s)	374, 2221
AjnI	CCWGG	1 cut(s)	1829
AjuI	GAANNNNNNNTTGG	2 cut(s)	1098, 1130
AleI	CACNNNNGTG	1 cut(s)	1997
AloI	GAACNNNNNNTCC	2 cut(s)	1843, 1875
Alw21I	GWGCWC	2 cut(s)	1104, 1375
Alw26I	GTCTC	4 cut(s)	208, 314, 729, 976
AlwI	GGATC	5 cut(s)	940, 1163, 1459, 1958, 1971
AlwNI	CAGNNNCTG	1 cut(s)	2239
Ama87I	CYCGRG	2 cut(s)	726, 1863
Aor13HI	TCCGGA	1 cut(s)	801
AoxI	GGCC	6 cut(s)	108, 143, 181, 193, 1041, 1202
ApeKI	GCWGC	9 cut(s)	97, 100, 242, 305, 794, 875, 878, 2105, 2108
ApoI	RAATTY	4 cut(s)	707, 1025, 1335, 1794
ArsI	GACNNNNNNTTYG	4 cut(s)	206, 238, 2012, 2044
Asp700I	GAANNNNTTC	3 cut(s)	255, 366, 2091
AspA2I	CCTAGG	1 cut(s)	1273
AspLEI	GCGC	1 cut(s)	1723
AspS9I	GGNCC	1 cut(s)	1827
AsuC2I	CCSGG	2 cut(s)	18, 2072
AsuHPI	GGTGA	2 cut(s)	1289, 1937
AvaI	CYCGRG	2 cut(s)	726, 1863
AvaII	GGWCC	1 cut(s)	1827
AvrII	CCTAGG	1 cut(s)	1273
BamHI	GGATCC	1 cut(s)	1963
BanI	GGYRCC	1 cut(s)	173
BauI	CACGAG	1 cut(s)	611
BbsI	GAAGAC	1 cut(s)	1428
Bbv12I	GWGCWC	2 cut(s)	1104, 1375
BbvI	GCAGC	9 cut(s)	109, 112, 229, 317, 806, 887, 890, 2092, 2095
BccI	CCATC	3 cut(s)	374, 1057, 1135
BceAI	ACGGC	3 cut(s)	130, 187, 524
BcgI	CGANNNNNNTGC	2 cut(s)	297, 331
BciT130I	CCWGG	1 cut(s)	1831
BciVI	GTATCC	1 cut(s)	1524
BcnI	CCSGG	2 cut(s)	18, 2072
BcoDI	GTCTC	4 cut(s)	208, 314, 729, 976
BfaI	CTAG	9 cut(s)	410, 462, 1059, 1097, 1274, 1523, 1844, 1955, 2007
BfmI	CTRYAG	2 cut(s)	428, 1134
BfrI	CTTAAG	2 cut(s)	890, 1705
BfuAI	ACCTGC	2 cut(s)	708, 1075
BfuI	GTATCC	1 cut(s)	1524
BglII	AGATCT	2 cut(s)	295, 1061
BlnI	CCTAGG	1 cut(s)	1273
Bme1390I	CCNGG	3 cut(s)	18, 1831, 2072
Bme18I	GGWCC	1 cut(s)	1827
BmeT110I	CYCGRG	2 cut(s)	726, 1863
BmgT120I	GGNCC	1 cut(s)	1827
BmiI	GGNNCC	4 cut(s)	37, 175, 1158, 1965
BmrFI	CCNGG	3 cut(s)	18, 1831, 2072
BmrI	ACTGGG	1 cut(s)	79
BmsI	GCATC	9 cut(s)	71, 448, 466, 857, 932, 1702, 1792, 1876, 2286
BmuI	ACTGGG	1 cut(s)	79
BpiI	GAAGAC	1 cut(s)	1428
BpmI	CTGGAG	3 cut(s)	54, 923, 1799
Bpu10I	CCTNAGC	1 cut(s)	165
BpuMI	CCSGG	2 cut(s)	18, 2072
BsaJI	CCNNGG	6 cut(s)	45, 210, 732, 1273, 1986, 2070
BsaWI	WCCGGW	1 cut(s)	801
BsaXI	ACNNNNNCTCC	4 cut(s)	796, 826, 1843, 1873
Bsc4I	CCNNNNNNNGG	6 cut(s)	32, 871, 1633, 1670, 2077, 2245
Bse1I	ACTGG	5 cut(s)	74, 690, 896, 1588, 1927
Bse3DI	GCAATG	1 cut(s)	127
BseAI	TCCGGA	1 cut(s)	801
BseBI	CCWGG	1 cut(s)	1831
BseDI	CCNNGG	6 cut(s)	45, 210, 732, 1273, 1986, 2070
BseGI	GGATG	3 cut(s)	1073, 1423, 1658
BseLI	CCNNNNNNNGG	6 cut(s)	32, 871, 1633, 1670, 2077, 2245
BseMI	GCAATG	1 cut(s)	127
BseMII	CTCAG	4 cut(s)	179, 797, 825, 956
BseNI	ACTGG	5 cut(s)	74, 690, 896, 1588, 1927
BseRI	GAGGAG	2 cut(s)	341, 1943
BseX3I	CGGCCG	1 cut(s)	143
BseXI	GCAGC	9 cut(s)	109, 112, 229, 317, 806, 887, 890, 2092, 2095
BsgI	GTGCAG	1 cut(s)	593
Bsh1236I	CGCG	1 cut(s)	1031
Bsh1285I	CGRYCG	1 cut(s)	146
BshFI	GGCC	6 cut(s)	110, 145, 183, 195, 1043, 1204
BshNI	GGYRCC	1 cut(s)	173
BsiEI	CGRYCG	1 cut(s)	146
BsiHKAI	GWGCWC	2 cut(s)	1104, 1375
BsiHKCI	CYCGRG	2 cut(s)	726, 1863
BsiSI	CCGG	3 cut(s)	18, 802, 2072
BsiWI	CGTACG	1 cut(s)	657
BslI	CCNNNNNNNGG	6 cut(s)	32, 871, 1633, 1670, 2077, 2245
BsmAI	GTCTC	4 cut(s)	208, 314, 729, 976
BsmI	GAATGC	2 cut(s)	366, 962
BsnI	GGCC	6 cut(s)	110, 145, 183, 195, 1043, 1204
BsoBI	CYCGRG	2 cut(s)	726, 1863
Bsp1286I	GDGCHC	2 cut(s)	1104, 1375
Bsp13I	TCCGGA	1 cut(s)	801
Bsp143I	GATC	8 cut(s)	295, 945, 1061, 1168, 1451, 1655, 1963, 2053
Bsp68I	TCGCGA	1 cut(s)	1031
BspACI	CCGC	9 cut(s)	5, 107, 142, 240, 1201, 1357, 1457, 1634, 2261
BspANI	GGCC	6 cut(s)	110, 145, 183, 195, 1043, 1204
BspCNI	CTCAG	4 cut(s)	178, 796, 826, 955
BspEI	TCCGGA	1 cut(s)	801
BspFNI	CGCG	1 cut(s)	1031
BspHI	TCATGA	2 cut(s)	1216, 1351
BspLI	GGNNCC	4 cut(s)	37, 175, 1158, 1965
BspMAI	CTGCAG	1 cut(s)	1138
BspMI	ACCTGC	2 cut(s)	708, 1075
BspPI	GGATC	5 cut(s)	940, 1163, 1459, 1958, 1971
BspT107I	GGYRCC	1 cut(s)	173
BspTI	CTTAAG	2 cut(s)	890, 1705
BsrBI	CCGCTC	2 cut(s)	142, 1357
BsrDI	GCAATG	1 cut(s)	127
BsrI	ACTGG	5 cut(s)	74, 690, 896, 1588, 1927
BssECI	CCNNGG	6 cut(s)	45, 210, 732, 1273, 1986, 2070
BssMI	GATC	8 cut(s)	295, 945, 1061, 1168, 1451, 1655, 1963, 2053
BssSI	CACGAG	1 cut(s)	611
BssT1I	CCWWGG	5 cut(s)	45, 210, 732, 1273, 1986
Bst2BI	CACGAG	1 cut(s)	611
Bst2UI	CCWGG	1 cut(s)	1831
Bst4CI	ACNGT	7 cut(s)	202, 492, 678, 974, 1284, 1673, 2187
Bst6I	CTCTTC	3 cut(s)	474, 633, 2259
BstAFI	CTTAAG	2 cut(s)	890, 1705
BstAPI	GCANNNNNTGC	1 cut(s)	2125
BstC8I	GCNNGC	4 cut(s)	105, 481, 1094, 1636
BstDEI	CTNAG	6 cut(s)	165, 783, 834, 942, 1787, 1799
BstENI	CCTNNNNNAGG	1 cut(s)	2243
BstF5I	GGATG	3 cut(s)	1073, 1423, 1658
BstFNI	CGCG	1 cut(s)	1031
BstHHI	GCGC	1 cut(s)	1723
BstKTI	GATC	8 cut(s)	298, 948, 1064, 1171, 1454, 1658, 1966, 2056
BstMAI	GTCTC	4 cut(s)	208, 314, 729, 976
BstMBI	GATC	8 cut(s)	295, 945, 1061, 1168, 1451, 1655, 1963, 2053
BstMCI	CGRYCG	1 cut(s)	146
BstMWI	GCNNNNNNNGC	8 cut(s)	180, 225, 251, 813, 1720, 2003, 2125, 2158
BstNI	CCWGG	1 cut(s)	1831
BstNSI	RCATGY	4 cut(s)	378, 2225, 2290, 2312
BstSCI	CCNGG	3 cut(s)	16, 1829, 2070
BstSFI	CTRYAG	2 cut(s)	428, 1134
BstUI	CGCG	1 cut(s)	1031
BstV1I	GCAGC	9 cut(s)	109, 112, 229, 317, 806, 887, 890, 2092, 2095
BstV2I	GAAGAC	1 cut(s)	1428
BstX2I	RGATCY	6 cut(s)	295, 945, 1061, 1168, 1451, 1963
BstXI	CCANNNNNNTGG	1 cut(s)	191
BstYI	RGATCY	6 cut(s)	295, 945, 1061, 1168, 1451, 1963
BstZI	CGGCCG	1 cut(s)	143
BsuI	GTATCC	1 cut(s)	1524
BsuRI	GGCC	6 cut(s)	110, 145, 183, 195, 1043, 1204
BtsCI	GGATG	3 cut(s)	1073, 1423, 1658
BtsI	GCAGTG	2 cut(s)	814, 1196
BtsIMutI	CAGTG	7 cut(s)	67, 697, 814, 903, 1052, 1196, 1920
BtuMI	TCGCGA	1 cut(s)	1031
BveI	ACCTGC	2 cut(s)	708, 1075
Cac8I	GCNNGC	4 cut(s)	105, 481, 1094, 1636
CaiI	CAGNNNCTG	1 cut(s)	2239
CciI	TCATGA	2 cut(s)	1216, 1351
CfoI	GCGC	1 cut(s)	1723
Cfr13I	GGNCC	1 cut(s)	1827
Csp6I	GTAC	6 cut(s)	658, 755, 788, 1007, 2231, 2270
CspCI	CAANNNNNGTGG	2 cut(s)	141, 176
CviAII	CATG	9 cut(s)	375, 598, 752, 1217, 1352, 1509, 2222, 2287, 2309
CviQI	GTAC	6 cut(s)	658, 755, 788, 1007, 2231, 2270
DdeI	CTNAG	6 cut(s)	165, 783, 834, 942, 1787, 1799
DpnI	GATC	8 cut(s)	297, 947, 1063, 1170, 1453, 1657, 1965, 2055
DpnII	GATC	8 cut(s)	295, 945, 1061, 1168, 1451, 1655, 1963, 2053
DraI	TTTAAA	1 cut(s)	1504
EaeI	YGGCCR	3 cut(s)	108, 143, 1202
EagI	CGGCCG	1 cut(s)	143
Eam1104I	CTCTTC	3 cut(s)	474, 633, 2259
EarI	CTCTTC	3 cut(s)	474, 633, 2259
EclXI	CGGCCG	1 cut(s)	143
Eco130I	CCWWGG	5 cut(s)	45, 210, 732, 1273, 1986
Eco147I	AGGCCT	1 cut(s)	1043
Eco32I	GATATC	1 cut(s)	1536
Eco47I	GGWCC	1 cut(s)	1827
Eco52I	CGGCCG	1 cut(s)	143
Eco57I	CTGAAG	2 cut(s)	1287, 2264
Eco88I	CYCGRG	2 cut(s)	726, 1863
EcoNI	CCTNNNNNAGG	1 cut(s)	2243
EcoRI	GAATTC	3 cut(s)	1025, 1335, 1794
EcoRII	CCWGG	1 cut(s)	1829
EcoRV	GATATC	1 cut(s)	1536
EcoT14I	CCWWGG	5 cut(s)	45, 210, 732, 1273, 1986
ErhI	CCWWGG	5 cut(s)	45, 210, 732, 1273, 1986
FaeI	CATG	9 cut(s)	378, 601, 755, 1220, 1355, 1512, 2225, 2290, 2312
FalI	AAGNNNNNCTT	2 cut(s)	243, 275
FatI	CATG	9 cut(s)	374, 597, 751, 1216, 1351, 1508, 2221, 2286, 2308
FauI	CCCGC	1 cut(s)	1627
FblI	GTMKAC	3 cut(s)	348, 1178, 1315
FokI	GGATG	3 cut(s)	1080, 1430, 1645
FspBI	CTAG	9 cut(s)	410, 462, 1059, 1097, 1274, 1523, 1844, 1955, 2007
GlaI	GCGC	1 cut(s)	1722
GsuI	CTGGAG	3 cut(s)	54, 923, 1799
HaeIII	GGCC	6 cut(s)	110, 145, 183, 195, 1043, 1204
HapII	CCGG	3 cut(s)	18, 802, 2072
HhaI	GCGC	1 cut(s)	1723
Hin1II	CATG	9 cut(s)	378, 601, 755, 1220, 1355, 1512, 2225, 2290, 2312
Hin6I	GCGC	1 cut(s)	1721
HinP1I	GCGC	1 cut(s)	1721
HincII	GTYRAC	2 cut(s)	1362, 1836
HindII	GTYRAC	2 cut(s)	1362, 1836
HindIII	AAGCTT	2 cut(s)	2058, 2150
HinfI	GANTC	7 cut(s)	271, 686, 742, 1301, 1619, 2014, 2027
HpaI	GTTAAC	1 cut(s)	1362
HpaII	CCGG	3 cut(s)	18, 802, 2072
HphI	GGTGA	2 cut(s)	1289, 1937
Hpy99I	CGWCG	1 cut(s)	665
HpyAV	CCTTC	3 cut(s)	1442, 2239, 2301
HpyCH4III	ACNGT	7 cut(s)	202, 492, 678, 974, 1284, 1673, 2187
HpyCH4IV	ACGT	3 cut(s)	660, 1143, 1318
HpyF10VI	GCNNNNNNNGC	8 cut(s)	180, 225, 251, 813, 1720, 2003, 2125, 2158
HpyF3I	CTNAG	6 cut(s)	165, 783, 834, 942, 1787, 1799
HpySE526I	ACGT	3 cut(s)	660, 1143, 1318
Hsp92II	CATG	9 cut(s)	378, 601, 755, 1220, 1355, 1512, 2225, 2290, 2312
HspAI	GCGC	1 cut(s)	1721
Kpn2I	TCCGGA	1 cut(s)	801
KspAI	GTTAAC	1 cut(s)	1362
Kzo9I	GATC	8 cut(s)	295, 945, 1061, 1168, 1451, 1655, 1963, 2053
LmnI	GCTCC	5 cut(s)	35, 804, 1162, 1711, 1780
Lsp1109I	GCAGC	9 cut(s)	109, 112, 229, 317, 806, 887, 890, 2092, 2095
LweI	GCATC	9 cut(s)	71, 448, 466, 857, 932, 1702, 1792, 1876, 2286
MaeI	CTAG	9 cut(s)	410, 462, 1059, 1097, 1274, 1523, 1844, 1955, 2007
MaeII	ACGT	3 cut(s)	660, 1143, 1318
MaeIII	GTNAC	3 cut(s)	1744, 1945, 1990
MalI	GATC	8 cut(s)	297, 947, 1063, 1170, 1453, 1657, 1965, 2055
MbiI	CCGCTC	2 cut(s)	142, 1357
MboI	GATC	8 cut(s)	295, 945, 1061, 1168, 1451, 1655, 1963, 2053
MboII	GAAGA	8 cut(s)	461, 620, 771, 1045, 1122, 1433, 1688, 2276
MfeI	CAATTG	1 cut(s)	716
MflI	RGATCY	6 cut(s)	295, 945, 1061, 1168, 1451, 1963
MhlI	GDGCHC	2 cut(s)	1104, 1375
MlyI	GAGTC	1 cut(s)	2036
MmeI	TCCRAC	2 cut(s)	297, 1271
MroI	TCCGGA	1 cut(s)	801
MroXI	GAANNNNTTC	3 cut(s)	255, 366, 2091
MseI	TTAA	8 cut(s)	420, 494, 891, 1286, 1361, 1503, 1688, 1706
MslI	CAYNNNNRTG	4 cut(s)	189, 1386, 1997, 2285
MspA1I	CMGCKG	3 cut(s)	242, 1997, 2261
MspCI	CTTAAG	2 cut(s)	890, 1705
MspI	CCGG	3 cut(s)	18, 802, 2072
MspR9I	CCNGG	3 cut(s)	18, 1831, 2072
MunI	CAATTG	1 cut(s)	716
Mva1269I	GAATGC	2 cut(s)	366, 962
MvaI	CCWGG	1 cut(s)	1831
MvnI	CGCG	1 cut(s)	1031
MwoI	GCNNNNNNNGC	8 cut(s)	180, 225, 251, 813, 1720, 2003, 2125, 2158
NciI	CCSGG	2 cut(s)	18, 2072
NdeII	GATC	8 cut(s)	295, 945, 1061, 1168, 1451, 1655, 1963, 2053
NlaIII	CATG	9 cut(s)	378, 601, 755, 1220, 1355, 1512, 2225, 2290, 2312
NlaIV	GGNNCC	4 cut(s)	37, 175, 1158, 1965
NmuCI	GTSAC	3 cut(s)	1744, 1945, 1990
NruI	TCGCGA	1 cut(s)	1031
NspI	RCATGY	4 cut(s)	378, 2225, 2290, 2312
OliI	CACNNNNGTG	1 cut(s)	1997
PaeR7I	CTCGAG	1 cut(s)	726
PagI	TCATGA	2 cut(s)	1216, 1351
PceI	AGGCCT	1 cut(s)	1043
PciI	ACATGT	2 cut(s)	374, 2221
PcsI	WCGNNNNNNNCGW	1 cut(s)	480
PctI	GAATGC	2 cut(s)	366, 962
PdmI	GAANNNNTTC	3 cut(s)	255, 366, 2091
PfeI	GAWTC	6 cut(s)	271, 686, 742, 1301, 1619, 2014
Pfl23II	CGTACG	1 cut(s)	657
PleI	GAGTC	1 cut(s)	2035
PpsI	GAGTC	1 cut(s)	2035
PscI	ACATGT	2 cut(s)	374, 2221
Psp6I	CCWGG	1 cut(s)	1829
PspGI	CCWGG	1 cut(s)	1829
PspLI	CGTACG	1 cut(s)	657
PspN4I	GGNNCC	4 cut(s)	37, 175, 1158, 1965
PspPI	GGNCC	1 cut(s)	1827
PsrI	GAACNNNNNNTAC	2 cut(s)	747, 779
PstI	CTGCAG	1 cut(s)	1138
PstNI	CAGNNNCTG	1 cut(s)	2239
PsuI	RGATCY	6 cut(s)	295, 945, 1061, 1168, 1451, 1963
PvuII	CAGCTG	1 cut(s)	1997
RruI	TCGCGA	1 cut(s)	1031
RsaI	GTAC	6 cut(s)	659, 756, 789, 1008, 2232, 2271
RsaNI	GTAC	6 cut(s)	658, 755, 788, 1007, 2231, 2270
RseI	CAYNNNNRTG	4 cut(s)	189, 1386, 1997, 2285
SaqAI	TTAA	8 cut(s)	420, 494, 891, 1286, 1361, 1503, 1688, 1706
Sau3AI	GATC	8 cut(s)	295, 945, 1061, 1168, 1451, 1655, 1963, 2053
Sau96I	GGNCC	1 cut(s)	1827
SchI	GAGTC	1 cut(s)	2036
ScrFI	CCNGG	3 cut(s)	18, 1831, 2072
SduI	GDGCHC	2 cut(s)	1104, 1375
SfaNI	GCATC	9 cut(s)	71, 448, 466, 857, 932, 1702, 1792, 1876, 2286
SfcI	CTRYAG	2 cut(s)	428, 1134
Sfr274I	CTCGAG	1 cut(s)	726
SinI	GGWCC	1 cut(s)	1827
SlaI	CTCGAG	1 cut(s)	726
SmiMI	CAYNNNNRTG	4 cut(s)	189, 1386, 1997, 2285
SmlI	CTYRAG	3 cut(s)	726, 890, 1705
SmoI	CTYRAG	3 cut(s)	726, 890, 1705
SseBI	AGGCCT	1 cut(s)	1043
SsiI	CCGC	9 cut(s)	5, 107, 142, 240, 1201, 1357, 1457, 1634, 2261
SspI	AATATT	2 cut(s)	571, 2209
SspMI	CTAG	9 cut(s)	410, 462, 1059, 1097, 1274, 1523, 1844, 1955, 2007
StuI	AGGCCT	1 cut(s)	1043
StyD4I	CCNGG	3 cut(s)	16, 1829, 2070
StyI	CCWWGG	5 cut(s)	45, 210, 732, 1273, 1986
TaaI	ACNGT	7 cut(s)	202, 492, 678, 974, 1284, 1673, 2187
TaiI	ACGT	3 cut(s)	663, 1146, 1321
TaqI	TCGA	7 cut(s)	337, 663, 712, 727, 1375, 2214, 2227
TaqII	GACCGA	1 cut(s)	380
TatI	WGTACW	3 cut(s)	754, 1006, 2230
TauI	GCSGC	5 cut(s)	8, 110, 145, 1204, 1460
TfiI	GAWTC	6 cut(s)	271, 686, 742, 1301, 1619, 2014
Tru1I	TTAA	8 cut(s)	420, 494, 891, 1286, 1361, 1503, 1688, 1706
Tru9I	TTAA	8 cut(s)	420, 494, 891, 1286, 1361, 1503, 1688, 1706
TscAI	CASTG	7 cut(s)	74, 697, 814, 903, 1059, 1203, 1927
TseFI	GTSAC	3 cut(s)	1744, 1945, 1990
TseI	GCWGC	9 cut(s)	97, 100, 242, 305, 794, 875, 878, 2105, 2108
Tsp45I	GTSAC	3 cut(s)	1744, 1945, 1990
TspGWI	ACGGA	4 cut(s)	75, 524, 854, 1358
TspRI	CASTG	7 cut(s)	74, 697, 814, 903, 1059, 1203, 1927
Vha464I	CTTAAG	2 cut(s)	890, 1705
VpaK11BI	GGWCC	1 cut(s)	1827
XagI	CCTNNNNNAGG	1 cut(s)	2243
XapI	RAATTY	4 cut(s)	707, 1025, 1335, 1794
XbaI	TCTAGA	1 cut(s)	1522
XceI	RCATGY	4 cut(s)	378, 2225, 2290, 2312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1897
XhoI	CTCGAG	1 cut(s)	726
XmaJI	CCTAGG	1 cut(s)	1273
XmiI	GTMKAC	3 cut(s)	348, 1178, 1315
XmnI	GAANNNNTTC	3 cut(s)	255, 366, 2091
XspI	CTAG	9 cut(s)	410, 462, 1059, 1097, 1274, 1523, 1844, 1955, 2007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.