Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007915

Physical Location & Seq

Genomic Coordinates Reverse (-)

18248137 .. 18255538

Gene Structure 7402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1224400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGCGGCAAGCAAGCCGAGCGTTCCGAAATCTGGAGCCATTTCCAAGGGCTACAACTTCGCATCTCACTGGGAACAGAATACTCCGTTAACGGAGCAGCAGCAAGCAGCCATTTCAACGCTCTCGCATTCCGTCGCGGAGCGGCCATTCCCTCCCAATTTGGCACAGGACCGTACCACAGGGCACCAGATTGGCCTGACTGTCTCCACCAAGGACAGCTCTTTTGGCTCGGAACACTCAGCCGCCATTGAAGCTGTTCTTGTCAATACGAATCAGTTTTACAAATGGTTTACAGATCTCGAAGCAGCCTTGAAGTCAGAGACAGAGGAGAAGTATCGACACTATCTAGACACTTTGACAGAACGCATTCAGACATGTGATGGTATACTCGGTCAGGTCGATGACACCCTGGAGTTGTTTAATGAACTACAAGATCAGCATCAGGCAGTAGCAACAAAGACTAGAACTCTTCATGATGCATGCGACCGATTGTTGATAGAGAAGCAACGGCTGATTGAATTTACGGAAGCACTCCGCAGTAAGCTCAACTACTTTGATGAATTGGAGAATATTACGACCAATTTTTATTCTCCAAACATGAATGTTCTACACGAGAACTTTCTCCCTCTTCTCAAACGCCTTGATGAGTGCATATCGTATGTTGAAAGCAATCCACAATATGCAGAATCCAGTGTTTACCTGCTCAAATTTCGACAATTGCAGTCTCGAGCCTTGGGAATGATTCGTTCTCATGTACTTTCAGTTCTCAAAGGTGCTTCTTCTCAGGTACTGGCAGCTATCCGGGGCAGTGGTGGCAATAAAGCATCTGTTTCTGAGGGTGTAGAAGCATCCGTTATATATGTCCGTTTCAAGGCAGCAGCGAGTGAGCTTAAGCCAGTGCTGGAGGAAATTGAAGGCAGAGCATCAAGGAAAGAATATACTCAGATCCTTACAGAATGCCACAAACTATATTGTGAACAGAGACTTTCCTTGGTGAGAGGTATAGTACATCAACGAATATCTGAATTCGCCAAGAAAGAGGCCTTGCCATCATTGACTAGATCTGGATGTGCATATCTAATGCAGGTCTGCCAGCTAGAGCACCAACTTTTTGATCATTTTTTCCCATCTTCTGCAGAGGACGTTTCAAGTTTGGCTCCATTGATAGATCCTCTGTCCACATATTTATATGATACACTGCGGCCAAAACTTATTCATGAAACAAATGTTGATTTTCTTTGTGAACTTGTTGACATATTGAAAGTTGAAGTCCTAGGTGAACAGTTAAGTCGGAGGAGTGAATCATTAGCTGGTCTACGTCCTACATTAGAGAGAATTCTTGCCGATGTTCATGAGCGGTTAACTTTCCGTGCTCGAACACATATTCGTGATGAGATAGCAAATTATTTTCCTCTGGATGAAGACTTGGATTACCCTGCTAAGCTGGAAAGATCTGCAGCAGATCAACTTGAAAATACTTCTGCTGATGAAAACCTAGTTTTTAAAACATGGTATCCACCTCTAGAGAAAACGATATCTTGCCTTTCAAAGTTGTATCGCTGTTTAGAACCAGAAGTTTTTACTGGTTTAGCACAGGAAGTAGTTGAAGTTTGTTCAGTATCTATCCAGAAAGCTGGCAAACTCATCACAAAGAGATCATCTCCAATGGATGGTCAGCTTTTCCTCTTAAAGCATCTTCTTATCTTAAGGGAGCAGATTGCACCTTTCGATATTGAGTTTTCTGTCACACATAAGGAACTTGATTTCTCGCACTTGCTGGAGCATCTAAGACGAATTCTTAGAGGTCAAGCCTCTCTATCTGATTGGTCCAGGTCAACTTCACTAGCAAGAACCCTATCTCCCCGAGTTTTGGAAAGTCAAATAGATGCCAAAAAGGACTTGGAGAAAAGCCTGAAAACCACTGGTGAGGAGTTCATTATGTCAGTGACGAAGCTGGTTGTGGATCCTATGCTTTCATTTATTACCAAGGTCACAGCTGTGAAAGGTAGCCAGAATCAAAAGGTAGACTCTGTTATGGCCAAACCAATTAAAGATCATGCTTTTGCAACCCCAGATAAGGTGGCTGAACTTGTTCAAAAGGTAGCTGCTGCAATTCAGCAAGAGTTGCCAATGGTAATGACAAAAATGAAGCTTTATTTGCAGAACCCGTCAACACGAACTATACTATTCAAAGCTATAAAGACAAATATTGTCGAAGCACATGTTCGAGTACAGACGCTGCTGAAGGACGAGTATTCAGCGGAAGAGGTACAAGGCATCATAAACATGCCTTCCATACAAGAACTACATGCACAACTTGATAAACTCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006464 GO:0006486 GO:0006807 GO:0006810 GO:0006888 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008152 GO:0008565 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0017119 GO:0019538 GO:0031090 GO:0031647 GO:0031984 GO:0032588 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0034645 GO:0036211 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0050821 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0065007 GO:0065008 GO:0070085 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098588 GO:0098791 GO:0099023 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec34

Protein Analysis

778

Amino Acids

87.77

Weight (kDa)

6.02

Isoelectric Point (pI)

44.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG3_N	PF04136	115 - 257	4e-45	Conserved oligomeric Golgi complex subunit 3, N-terminal
COG3_C	PF20671	284 - 592	1e-104	Conserved oligomeric Golgi complex subunit 3, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73430 AT1G73430
fragaria_vesca	FvH4_1g09540 FvH4_1g09540 FvH4_1g09540 FvH4_1g09540 FvH4_1g09540
malus_domestica	MD02G1104000.v1.1 MD15G1224400.v1.1
prunus_persica	Prupe.7G190900_v2.0.a1
pyrus_communis	pycom02g08190 pycom15g19960
rosa_chinensis	RchiOBHm_Chr2g0096121 RchiOBHm_Chr2g0096281
rosa_laevigata	RLG00000016627
rosa_multiflora	Rmu_sc0005996.1_g000008
rosa_roxburghii	Rroxscaffold_2G00145730
rosa_rugosa	Rorug02G0057400
rosa_samantha	Rh2AG104200 Rh2BG106300 Rh2CG108200 Rh2DG106900 Rh2DG107000
rosa_wichuraiana	Rw2G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	708, 1075
AccB1I	GGYRCC	1 cut(s)	183
AccB7I	CCANNNNNTGG	1 cut(s)	1670
AccBSI	CCGCTC	2 cut(s)	142, 1357
AccI	GTMKAC	3 cut(s)	385, 1315, 2025
AccII	CGCG	1 cut(s)	137
AciI	CCGC	8 cut(s)	5, 137, 142, 243, 535, 1201, 1357, 2261
AclWI	GGATC	4 cut(s)	940, 1163, 1958, 1971
AcoI	YGGCCR	3 cut(s)	143, 1202, 2037
AcsI	RAATTY	5 cut(s)	518, 707, 1025, 1335, 1794
AcuI	CTGAAG	1 cut(s)	2264
AfaI	GTAC	6 cut(s)	175, 756, 789, 1008, 2232, 2271
AfiI	CCNNNNNNNGG	5 cut(s)	32, 871, 1670, 1870, 2077
AflII	CTTAAG	2 cut(s)	890, 1705
AflIII	ACRYGT	2 cut(s)	374, 2221
AjnI	CCWGG	2 cut(s)	408, 1829
AleI	CACNNNNGTG	1 cut(s)	1997
AloI	GAACNNNNNNTCC	2 cut(s)	1843, 1875
Alw21I	GWGCWC	2 cut(s)	1104, 1375
Alw26I	GTCTC	4 cut(s)	208, 314, 729, 976
AlwI	GGATC	4 cut(s)	940, 1163, 1958, 1971
AlwNI	CAGNNNCTG	2 cut(s)	790, 2239
Ama87I	CYCGRG	2 cut(s)	726, 1863
AoxI	GGCC	5 cut(s)	143, 193, 1041, 1202, 2037
ApoI	RAATTY	5 cut(s)	518, 707, 1025, 1335, 1794
ArsI	GACNNNNNNTTYG	2 cut(s)	206, 238
Asp700I	GAANNNNTTC	3 cut(s)	255, 366, 2091
AspA2I	CCTAGG	1 cut(s)	1273
AspS9I	GGNCC	2 cut(s)	169, 1827
AsuC2I	CCSGG	1 cut(s)	803
AsuHPI	GGTGA	3 cut(s)	1006, 1289, 1937
AvaI	CYCGRG	2 cut(s)	726, 1863
AvaII	GGWCC	2 cut(s)	169, 1827
AvrII	CCTAGG	1 cut(s)	1273
BaeGI	GKGCMC	1 cut(s)	186
BalI	TGGCCA	1 cut(s)	2039
BamHI	GGATCC	1 cut(s)	1963
BanI	GGYRCC	1 cut(s)	183
BauI	CACGAG	1 cut(s)	611
BbsI	GAAGAC	1 cut(s)	1428
Bbv12I	GWGCWC	2 cut(s)	1104, 1375
BccI	CCATC	4 cut(s)	374, 1057, 1135, 1664
BceAI	ACGGC	1 cut(s)	524
BciT130I	CCWGG	2 cut(s)	410, 1831
BciVI	GTATCC	1 cut(s)	1524
BclI	TGATCA	1 cut(s)	1114
BcnI	CCSGG	1 cut(s)	803
BcoDI	GTCTC	4 cut(s)	208, 314, 729, 976
BfaI	CTAG	8 cut(s)	347, 462, 1059, 1097, 1274, 1496, 1523, 1844
BfmI	CTRYAG	2 cut(s)	1134, 1455
BfrI	CTTAAG	2 cut(s)	890, 1705
BfuAI	ACCTGC	2 cut(s)	708, 1075
BfuI	GTATCC	1 cut(s)	1524
BglII	AGATCT	3 cut(s)	295, 1061, 1451
BlnI	CCTAGG	1 cut(s)	1273
BlpI	GCTNAGC	1 cut(s)	1440
Bme1390I	CCNGG	3 cut(s)	410, 803, 1831
Bme18I	GGWCC	2 cut(s)	169, 1827
BmeT110I	CYCGRG	2 cut(s)	726, 1863
BmgT120I	GGNCC	2 cut(s)	169, 1827
BmiI	GGNNCC	4 cut(s)	37, 185, 1158, 1965
BmrFI	CCNGG	3 cut(s)	410, 803, 1831
BmrI	ACTGGG	1 cut(s)	79
BmuI	ACTGGG	1 cut(s)	79
BpiI	GAAGAC	1 cut(s)	1428
BplI	GAGNNNNNCTC	2 cut(s)	1645, 1677
BpmI	CTGGAG	4 cut(s)	54, 431, 923, 1799
Bpu1102I	GCTNAGC	1 cut(s)	1440
BpuMI	CCSGG	1 cut(s)	803
BsaBI	GATNNNNATC	1 cut(s)	438
BsaJI	CCNNGG	8 cut(s)	45, 210, 408, 732, 802, 990, 1273, 1986
BsaXI	ACNNNNNCTCC	2 cut(s)	1843, 1873
Bsc4I	CCNNNNNNNGG	5 cut(s)	32, 871, 1670, 1870, 2077
Bse1I	ACTGG	6 cut(s)	74, 690, 795, 896, 1588, 1927
Bse8I	GATNNNNATC	1 cut(s)	438
BseBI	CCWGG	2 cut(s)	410, 1831
BseDI	CCNNGG	8 cut(s)	45, 210, 408, 732, 802, 990, 1273, 1986
BseGI	GGATG	4 cut(s)	848, 1073, 1423, 1675
BseJI	GATNNNNATC	1 cut(s)	438
BseLI	CCNNNNNNNGG	5 cut(s)	32, 871, 1670, 1870, 2077
BseMII	CTCAG	4 cut(s)	252, 797, 825, 956
BseNI	ACTGG	6 cut(s)	74, 690, 795, 896, 1588, 1927
BseRI	GAGGAG	3 cut(s)	341, 1309, 1943
BseSI	GKGCMC	1 cut(s)	186
Bsh1236I	CGCG	1 cut(s)	137
Bsh1285I	CGRYCG	1 cut(s)	487
BshFI	GGCC	5 cut(s)	145, 195, 1043, 1204, 2039
BshNI	GGYRCC	1 cut(s)	183
BsiEI	CGRYCG	1 cut(s)	487
BsiHKAI	GWGCWC	2 cut(s)	1104, 1375
BsiHKCI	CYCGRG	2 cut(s)	726, 1863
BsiSI	CCGG	1 cut(s)	802
BslI	CCNNNNNNNGG	5 cut(s)	32, 871, 1670, 1870, 2077
BsmAI	GTCTC	4 cut(s)	208, 314, 729, 976
BsmI	GAATGC	3 cut(s)	127, 366, 962
BsnI	GGCC	5 cut(s)	145, 195, 1043, 1204, 2039
BsoBI	CYCGRG	2 cut(s)	726, 1863
Bsp1286I	GDGCHC	3 cut(s)	186, 1104, 1375
Bsp1720I	GCTNAGC	1 cut(s)	1440
BspACI	CCGC	8 cut(s)	5, 137, 142, 243, 535, 1201, 1357, 2261
BspANI	GGCC	5 cut(s)	145, 195, 1043, 1204, 2039
BspCNI	CTCAG	4 cut(s)	251, 796, 826, 955
BspFNI	CGCG	1 cut(s)	137
BspHI	TCATGA	3 cut(s)	472, 1216, 1351
BspLI	GGNNCC	4 cut(s)	37, 185, 1158, 1965
BspMAI	CTGCAG	2 cut(s)	1138, 1459
BspMI	ACCTGC	2 cut(s)	708, 1075
BspPI	GGATC	4 cut(s)	940, 1163, 1958, 1971
BspT107I	GGYRCC	1 cut(s)	183
BspTI	CTTAAG	2 cut(s)	890, 1705
BsrBI	CCGCTC	2 cut(s)	142, 1357
BsrI	ACTGG	6 cut(s)	74, 690, 795, 896, 1588, 1927
BssECI	CCNNGG	8 cut(s)	45, 210, 408, 732, 802, 990, 1273, 1986
BssNAI	GTATAC	1 cut(s)	386
BssSI	CACGAG	1 cut(s)	611
BssT1I	CCWWGG	6 cut(s)	45, 210, 732, 990, 1273, 1986
Bst1107I	GTATAC	1 cut(s)	386
Bst2BI	CACGAG	1 cut(s)	611
Bst2UI	CCWGG	2 cut(s)	410, 1831
Bst4CI	ACNGT	3 cut(s)	173, 202, 1284
Bst6I	CTCTTC	3 cut(s)	474, 633, 2259
BstAFI	CTTAAG	2 cut(s)	890, 1705
BstAPI	GCANNNNNTGC	1 cut(s)	2125
BstC8I	GCNNGC	6 cut(s)	10, 14, 105, 481, 1094, 1636
BstDEI	CTNAG	7 cut(s)	238, 783, 834, 942, 1440, 1787, 1799
BstF5I	GGATG	4 cut(s)	848, 1073, 1423, 1675
BstFNI	CGCG	1 cut(s)	137
BstMAI	GTCTC	4 cut(s)	208, 314, 729, 976
BstMCI	CGRYCG	1 cut(s)	487
BstMWI	GCNNNNNNNGC	6 cut(s)	18, 225, 251, 813, 2125, 2158
BstNI	CCWGG	2 cut(s)	410, 1831
BstNSI	RCATGY	5 cut(s)	378, 483, 2225, 2290, 2312
BstSCI	CCNGG	3 cut(s)	408, 801, 1829
BstSFI	CTRYAG	2 cut(s)	1134, 1455
BstSLI	GKGCMC	1 cut(s)	186
BstUI	CGCG	1 cut(s)	137
BstV2I	GAAGAC	1 cut(s)	1428
BstX2I	RGATCY	6 cut(s)	295, 945, 1061, 1168, 1451, 1963
BstXI	CCANNNNNNTGG	1 cut(s)	1634
BstYI	RGATCY	6 cut(s)	295, 945, 1061, 1168, 1451, 1963
BstZ17I	GTATAC	1 cut(s)	386
BsuI	GTATCC	1 cut(s)	1524
BsuRI	GGCC	5 cut(s)	145, 195, 1043, 1204, 2039
BtsCI	GGATG	4 cut(s)	848, 1073, 1423, 1675
BtsI	GCAGTG	2 cut(s)	814, 1196
BtsIMutI	CAGTG	7 cut(s)	67, 697, 814, 903, 1196, 1920, 1950
BveI	ACCTGC	2 cut(s)	708, 1075
Cac8I	GCNNGC	6 cut(s)	10, 14, 105, 481, 1094, 1636
CaiI	CAGNNNCTG	2 cut(s)	790, 2239
CciI	TCATGA	3 cut(s)	472, 1216, 1351
Cfr13I	GGNCC	2 cut(s)	169, 1827
CseI	GACGC	1 cut(s)	2245
Csp6I	GTAC	6 cut(s)	174, 755, 788, 1007, 2231, 2270
CviQI	GTAC	6 cut(s)	174, 755, 788, 1007, 2231, 2270
DdeI	CTNAG	7 cut(s)	238, 783, 834, 942, 1440, 1787, 1799
DraI	TTTAAA	1 cut(s)	1504
EaeI	YGGCCR	3 cut(s)	143, 1202, 2037
Eam1104I	CTCTTC	3 cut(s)	474, 633, 2259
EarI	CTCTTC	3 cut(s)	474, 633, 2259
Eco130I	CCWWGG	6 cut(s)	45, 210, 732, 990, 1273, 1986
Eco147I	AGGCCT	1 cut(s)	1043
Eco32I	GATATC	1 cut(s)	1536
Eco47I	GGWCC	2 cut(s)	169, 1827
Eco57I	CTGAAG	1 cut(s)	2264
Eco88I	CYCGRG	2 cut(s)	726, 1863
EcoRI	GAATTC	3 cut(s)	1025, 1335, 1794
EcoRII	CCWGG	2 cut(s)	408, 1829
EcoRV	GATATC	1 cut(s)	1536
EcoT14I	CCWWGG	6 cut(s)	45, 210, 732, 990, 1273, 1986
EcoT22I	ATGCAT	1 cut(s)	481
ErhI	CCWWGG	6 cut(s)	45, 210, 732, 990, 1273, 1986
FalI	AAGNNNNNCTT	2 cut(s)	243, 275
FbaI	TGATCA	1 cut(s)	1114
FblI	GTMKAC	3 cut(s)	385, 1315, 2025
FokI	GGATG	4 cut(s)	835, 1080, 1430, 1682
FspBI	CTAG	8 cut(s)	347, 462, 1059, 1097, 1274, 1496, 1523, 1844
GsuI	CTGGAG	4 cut(s)	54, 431, 923, 1799
HaeIII	GGCC	5 cut(s)	145, 195, 1043, 1204, 2039
HapII	CCGG	1 cut(s)	802
HgaI	GACGC	1 cut(s)	2245
HincII	GTYRAC	5 cut(s)	90, 1252, 1362, 1836, 2172
HindII	GTYRAC	5 cut(s)	90, 1252, 1362, 1836, 2172
HindIII	AAGCTT	1 cut(s)	2150
HinfI	GANTC	6 cut(s)	271, 686, 742, 1301, 2014, 2027
HpaI	GTTAAC	2 cut(s)	90, 1362
HpaII	CCGG	1 cut(s)	802
HphI	GGTGA	3 cut(s)	1006, 1289, 1937
Hpy188I	TCNGA	9 cut(s)	27, 232, 319, 372, 835, 945, 1024, 1293, 1822
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	3 cut(s)	908, 2239, 2301
HpyCH4III	ACNGT	3 cut(s)	173, 202, 1284
HpyCH4IV	ACGT	2 cut(s)	1143, 1318
HpyF10VI	GCNNNNNNNGC	6 cut(s)	18, 225, 251, 813, 2125, 2158
HpyF3I	CTNAG	7 cut(s)	238, 783, 834, 942, 1440, 1787, 1799
HpySE526I	ACGT	2 cut(s)	1143, 1318
Ksp22I	TGATCA	1 cut(s)	1114
KspAI	GTTAAC	2 cut(s)	90, 1362
LmnI	GCTCC	6 cut(s)	35, 94, 139, 1162, 1711, 1780
MaeI	CTAG	8 cut(s)	347, 462, 1059, 1097, 1274, 1496, 1523, 1844
MaeII	ACGT	2 cut(s)	1143, 1318
MaeIII	GTNAC	3 cut(s)	1744, 1945, 1990
MbiI	CCGCTC	2 cut(s)	142, 1357
MboII	GAAGA	7 cut(s)	461, 620, 771, 1122, 1433, 1688, 2276
MfeI	CAATTG	1 cut(s)	716
MflI	RGATCY	6 cut(s)	295, 945, 1061, 1168, 1451, 1963
MhlI	GDGCHC	3 cut(s)	186, 1104, 1375
MlsI	TGGCCA	1 cut(s)	2039
MluNI	TGGCCA	1 cut(s)	2039
MlyI	GAGTC	1 cut(s)	2021
MmeI	TCCRAC	1 cut(s)	1271
Mox20I	TGGCCA	1 cut(s)	2039
Mph1103I	ATGCAT	1 cut(s)	481
MroXI	GAANNNNTTC	3 cut(s)	255, 366, 2091
MscI	TGGCCA	1 cut(s)	2039
MseI	TTAA	9 cut(s)	89, 420, 891, 1286, 1361, 1503, 1688, 1706, 2049
MslI	CAYNNNNRTG	3 cut(s)	1386, 1997, 2285
Msp20I	TGGCCA	1 cut(s)	2039
MspA1I	CMGCKG	2 cut(s)	1997, 2261
MspCI	CTTAAG	2 cut(s)	890, 1705
MspI	CCGG	1 cut(s)	802
MspR9I	CCNGG	3 cut(s)	410, 803, 1831
MunI	CAATTG	1 cut(s)	716
Mva1269I	GAATGC	3 cut(s)	127, 366, 962
MvaI	CCWGG	2 cut(s)	410, 1831
MvnI	CGCG	1 cut(s)	137
MwoI	GCNNNNNNNGC	6 cut(s)	18, 225, 251, 813, 2125, 2158
NciI	CCSGG	1 cut(s)	803
NlaIV	GGNNCC	4 cut(s)	37, 185, 1158, 1965
NmeAIII	GCCGAG	1 cut(s)	42
NmuCI	GTSAC	3 cut(s)	1744, 1945, 1990
NsiI	ATGCAT	1 cut(s)	481
NspI	RCATGY	5 cut(s)	378, 483, 2225, 2290, 2312
OliI	CACNNNNGTG	1 cut(s)	1997
PaeI	GCATGC	1 cut(s)	483
PaeR7I	CTCGAG	1 cut(s)	726
PagI	TCATGA	3 cut(s)	472, 1216, 1351
PceI	AGGCCT	1 cut(s)	1043
PciI	ACATGT	2 cut(s)	374, 2221
PcsI	WCGNNNNNNNCGW	1 cut(s)	396
PctI	GAATGC	3 cut(s)	127, 366, 962
PdmI	GAANNNNTTC	3 cut(s)	255, 366, 2091
PfeI	GAWTC	5 cut(s)	271, 686, 742, 1301, 2014
PflMI	CCANNNNNTGG	1 cut(s)	1670
PleI	GAGTC	1 cut(s)	2021
PpsI	GAGTC	1 cut(s)	2021
PscI	ACATGT	2 cut(s)	374, 2221
Psp6I	CCWGG	2 cut(s)	408, 1829
PspGI	CCWGG	2 cut(s)	408, 1829
PspN4I	GGNNCC	4 cut(s)	37, 185, 1158, 1965
PspPI	GGNCC	2 cut(s)	169, 1827
PsrI	GAACNNNNNNTAC	2 cut(s)	747, 779
PstI	CTGCAG	2 cut(s)	1138, 1459
PstNI	CAGNNNCTG	2 cut(s)	790, 2239
PsuI	RGATCY	6 cut(s)	295, 945, 1061, 1168, 1451, 1963
PvuII	CAGCTG	1 cut(s)	1997
RsaI	GTAC	6 cut(s)	175, 756, 789, 1008, 2232, 2271
RsaNI	GTAC	6 cut(s)	174, 755, 788, 1007, 2231, 2270
RseI	CAYNNNNRTG	3 cut(s)	1386, 1997, 2285
SaqAI	TTAA	9 cut(s)	89, 420, 891, 1286, 1361, 1503, 1688, 1706, 2049
Sau96I	GGNCC	2 cut(s)	169, 1827
SchI	GAGTC	1 cut(s)	2021
ScrFI	CCNGG	3 cut(s)	410, 803, 1831
SduI	GDGCHC	3 cut(s)	186, 1104, 1375
SfcI	CTRYAG	2 cut(s)	1134, 1455
Sfr274I	CTCGAG	1 cut(s)	726
SinI	GGWCC	2 cut(s)	169, 1827
SlaI	CTCGAG	1 cut(s)	726
SmiMI	CAYNNNNRTG	3 cut(s)	1386, 1997, 2285
SmlI	CTYRAG	3 cut(s)	726, 890, 1705
SmoI	CTYRAG	3 cut(s)	726, 890, 1705
SphI	GCATGC	1 cut(s)	483
SseBI	AGGCCT	1 cut(s)	1043
SsiI	CCGC	8 cut(s)	5, 137, 142, 243, 535, 1201, 1357, 2261
SspI	AATATT	2 cut(s)	571, 2209
SspMI	CTAG	8 cut(s)	347, 462, 1059, 1097, 1274, 1496, 1523, 1844
StuI	AGGCCT	1 cut(s)	1043
StyD4I	CCNGG	3 cut(s)	408, 801, 1829
StyI	CCWWGG	6 cut(s)	45, 210, 732, 990, 1273, 1986
TaaI	ACNGT	3 cut(s)	173, 202, 1284
TaiI	ACGT	2 cut(s)	1146, 1321
TaqI	TCGA	9 cut(s)	300, 337, 399, 712, 727, 1375, 1728, 2214, 2227
TaqII	GACCGA	2 cut(s)	380, 501
TatI	WGTACW	3 cut(s)	754, 1006, 2230
TauI	GCSGC	4 cut(s)	8, 145, 245, 1204
TfiI	GAWTC	5 cut(s)	271, 686, 742, 1301, 2014
Tru1I	TTAA	9 cut(s)	89, 420, 891, 1286, 1361, 1503, 1688, 1706, 2049
Tru9I	TTAA	9 cut(s)	89, 420, 891, 1286, 1361, 1503, 1688, 1706, 2049
TscAI	CASTG	7 cut(s)	74, 697, 814, 903, 1203, 1927, 1950
TseFI	GTSAC	3 cut(s)	1744, 1945, 1990
Tsp45I	GTSAC	3 cut(s)	1744, 1945, 1990
TspGWI	ACGGA	7 cut(s)	75, 107, 121, 539, 841, 854, 1358
TspRI	CASTG	7 cut(s)	74, 697, 814, 903, 1203, 1927, 1950
Van91I	CCANNNNNTGG	1 cut(s)	1670
Vha464I	CTTAAG	2 cut(s)	890, 1705
VpaK11BI	GGWCC	2 cut(s)	169, 1827
XapI	RAATTY	5 cut(s)	518, 707, 1025, 1335, 1794
XbaI	TCTAGA	2 cut(s)	346, 1522
XceI	RCATGY	5 cut(s)	378, 483, 2225, 2290, 2312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1897
XhoI	CTCGAG	1 cut(s)	726
XmaJI	CCTAGG	1 cut(s)	1273
XmiI	GTMKAC	3 cut(s)	385, 1315, 2025
XmnI	GAANNNNTTC	3 cut(s)	255, 366, 2091
XspI	CTAG	8 cut(s)	347, 462, 1059, 1097, 1274, 1496, 1523, 1844
Zsp2I	ATGCAT	1 cut(s)	481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.