Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0007915

Physical Location & Seq

Genomic Coordinates Reverse (-)

7847496 .. 7855543

Gene Structure 8048 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G008010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGGCGAGTAAGCCCGGCGTTCCGAGATCGGGAGCTATTTCCAAGGGCTACAATTTCGCATCTCACTGGGAACAGCAGCAACAAGCGGCCATTGCAAACCTCTCCCACGCCGTCGCAGAGCGACCGTTGCCGCCCAATTTGGCGCAAGATCGAATCTCGGAGCAGCAGAATGGCCTGTCAGTCTCCACCAAGGGCAGCTCTTTTGGCTTGGAACACTCTGCTGCTATGGAAGCCGTTCTTGTCAATACGAATCAGTTCTACAAATGGTTTACGGATCTTGAATCGGCCTTGAAGTCTGAGACAGAGGAGAAGTATCGCCACTATGTAGACACATTGATGGAGCGCATACAGATATGTGATGGTATCCTTCAGCAGGTGGATGATACTCTAGACTTGTTTAATGAACTACAACTGCAGCACCAGGCAGTAGCAACAAAGACTAAAACTCTTCATGATGCGTGCGACCGACTGTTGATAGAAAAGCAACGACTGATTGAATTTTCAGAAGCACTCCGCAGTAAGCTCAACTACTTTGATGAATTGGAGAATATTGCTACAAATTTTTATTCTCCAAACATGAATGTTCTAAATGAGAACTTTCTCCCTCTGCTCAAACGACTTGATGATTGCATATCGTATGTTGAAAGCAATCCGCAATATGCCGAATCCAGTGTTTACCTACTCAAATTTCGCCAACTGCAGTCTCGAGCCTTGGGCATGATTCGTTCACATGTACTTGCAATTCTTAAAGGTGCTTCTTCTCAGGTACAGGCAGCTATCGGAAGCAGTGGTGGCAGCAAAGCTTCTGTTTCTGAGGGTGTAGAAGCATCTGTTATATATGTCCGTTTCAAGGCGGCAGCAAGTGAGCTTAAACCAGTGCTGGAGGAAATTGAAAGCAGAGCATCAAGGAAAGAATATACTCAGATCCTTGCAGAATGTCACAAGCTATACTGCGAACAACGCCTTTCCTTGGTAAGAGGTATAGTACATCAAAGAATATCTGAATTCGCCAAGAAAGAGGCATTGCCATCATTGACTAGATCTGGATGTGCATATCTAATGCAGGTCTGTCAGCTTGAGCACCAACTTTTTGACCACTTTTTCCCATCTTCCGCAGAGGACGTTTCAAGTTTGGCTTCATTGATAGATCCTCTGTCTACATATTTATACGACACACTACGGCCAAAGCTTATTCATGAAACAAATATTGATTCTCTTTGTGAACTTGTTGATATATTGAAAGTTGAAGTCCTAGGTGAACAGTTAAGTCGGCGGAGTGAATCATTAGCTGGCCTACGTCCTACACTGGAGAGAATTCTTGCTGATGTTCATGAGAGGTTGACTTTCCGTGCTCGAACCCATATTCGTGATGAGATAGCAAATTATTTACCTTTGGACGAAGATTTGGATTACCCTGCAAAGCTGGAAAAAGCTGCGACAGATGAACTTGAAACTACTTCTGATGATGAAAACCTCGTTTTTAAGACCTGGTATCCACCTCTAGAGAAAACACTATCTTGTCTGTCAAAGCTGTATCGCTGCTTAGAACCTGAAGTTTTCACTGGTTTAGCACAGGAAGTTGTCGAAGTTTGTTCAATATCTATTCAGAAAGCTAGTAAACTCATTGCAAAGAGATCATCGCCAATGGATGGTCAGCTCTTCCTCATAAAGCATCTTCTTATCTTAAGGGAGAAGATTGCACCTTTCGATATTGAGTTTTCTGTTACACACAAGGAGCTTGATTTCTCGCACTTGCTGGAGCATCTACGGCGGATTCTTAGAGGTCAAGCCTCTCTATTTGACTGGTCCAGGACAACTTCGCTGGCAAGAACCTTATCTCCCCGTGTTTTGGAAAGTCAAATAGATGCCAAGAAGGAACTGGAGAAAAGCCTAAAAGCCACTTGTGAGGAGTTCATTATGTCGGTCACTAAGCTAGTTGTGGATCCTATGCTTTCATTTGTTACCAAGGTCACAGCTGTGAAAGTTGCAATGTCAGGCAGCCAGAATCAAAAGGTAGAGTTGGTTATGGCTAAACCACTCAAAGATCAAGCTTTTGCAACTCCAGATAAAGTAGCTGAACTTGTTCAAAAGGTAACCACTGCTATTCACCAAGAGTTGCCAATGGTAACGAGGAAAATGAAGCTTTATCTGCAGAACTCATCAACACGGACAATTCTATTCAAACCAATACAGACAAATATTGTGGAAGCCCATGTACAAGTACAGTCCCTGCTAAAGGCTGAGTATTCACCTGACGAACTACAAGGAATGATAAAGATGCCGTCTATTCAAGACCTACAAGCACAACTTGATACTCTACTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006464 GO:0006486 GO:0006807 GO:0006810 GO:0006888 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008152 GO:0008565 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0017119 GO:0019538 GO:0031090 GO:0031647 GO:0031984 GO:0032588 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0034645 GO:0036211 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0050821 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0065007 GO:0065008 GO:0070085 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0098588 GO:0098791 GO:0099023 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec34

Protein Analysis

774

Amino Acids

87.41

Weight (kDa)

5.93

Isoelectric Point (pI)

46.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG3_N	PF04136	108 - 250	2.9e-43	Conserved oligomeric Golgi complex subunit 3, N-terminal
COG3_C	PF20671	277 - 585	6.3e-106	Conserved oligomeric Golgi complex subunit 3, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73430 AT1G73430
fragaria_vesca	FvH4_1g09540 FvH4_1g09540 FvH4_1g09540 FvH4_1g09540 FvH4_1g09540
malus_domestica	MD02G1104000.v1.1 MD15G1224400.v1.1
prunus_persica	Prupe.7G190900_v2.0.a1
pyrus_communis	pycom02g08190 pycom15g19960
rosa_chinensis	RchiOBHm_Chr2g0096121 RchiOBHm_Chr2g0096281
rosa_laevigata	RLG00000016627
rosa_multiflora	Rmu_sc0005996.1_g000008
rosa_roxburghii	Rroxscaffold_2G00145730
rosa_rugosa	Rorug02G0057400
rosa_samantha	Rh2AG104200 Rh2BG106300 Rh2CG108200 Rh2DG106900 Rh2DG107000
rosa_wichuraiana	Rw2G008010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	364
Acc36I	ACCTGC	2 cut(s)	364, 1054
AccB7I	CCANNNNNTGG	1 cut(s)	1649
AccI	GTMKAC	2 cut(s)	327, 1157
AciI	CCGC	8 cut(s)	86, 131, 514, 653, 854, 1113, 1273, 1771
AclWI	GGATC	5 cut(s)	282, 919, 1142, 1937, 1950
AcoI	YGGCCR	2 cut(s)	87, 1181
AcsI	RAATTY	5 cut(s)	497, 559, 686, 1004, 1314
AcuI	CTGAAG	2 cut(s)	353, 1572
AfaI	GTAC	5 cut(s)	735, 768, 987, 2217, 2223
AfiI	CCNNNNNNNGG	7 cut(s)	29, 373, 850, 970, 1649, 1849, 2236
AflII	CTTAAG	1 cut(s)	1684
AflIII	ACRYGT	1 cut(s)	730
AjnI	CCWGG	3 cut(s)	420, 1487, 1808
AleI	CACNNNNGTG	1 cut(s)	1976
AloI	GAACNNNNNNTCC	2 cut(s)	1822, 1854
Alw21I	GWGCWC	2 cut(s)	1083, 1354
Alw26I	GTCTC	3 cut(s)	187, 293, 708
AlwI	GGATC	5 cut(s)	282, 919, 1142, 1937, 1950
AlwNI	CAGNNNCTG	1 cut(s)	2230
Ama87I	CYCGRG	1 cut(s)	705
AoxI	GGCC	5 cut(s)	87, 172, 285, 1181, 1291
ApoI	RAATTY	5 cut(s)	497, 559, 686, 1004, 1314
Asp700I	GAANNNNTTC	3 cut(s)	234, 254, 2082
AspA2I	CCTAGG	1 cut(s)	1252
AspLEI	GCGC	2 cut(s)	145, 345
AspS9I	GGNCC	1 cut(s)	1806
AsuC2I	CCSGG	1 cut(s)	15
AsuHPI	GGTGA	3 cut(s)	1268, 2099, 2241
AvaI	CYCGRG	1 cut(s)	705
AvaII	GGWCC	1 cut(s)	1806
AvrII	CCTAGG	1 cut(s)	1252
BamHI	GGATCC	1 cut(s)	1942
BarI	GAAGNNNNNNTAC	2 cut(s)	2199, 2231
Bbv12I	GWGCWC	2 cut(s)	1083, 1354
BccI	CCATC	5 cut(s)	331, 353, 1036, 1114, 1643
BceAI	ACGGC	5 cut(s)	95, 218, 1196, 1784, 2266
BciT130I	CCWGG	3 cut(s)	422, 1489, 1810
BciVI	GTATCC	2 cut(s)	374, 1503
BcnI	CCSGG	1 cut(s)	15
BcoDI	GTCTC	3 cut(s)	187, 293, 708
BfaI	CTAG	6 cut(s)	389, 1038, 1253, 1502, 1614, 1934
BfmI	CTRYAG	4 cut(s)	413, 698, 2150, 2321
BfrI	CTTAAG	1 cut(s)	1684
BfuAI	ACCTGC	2 cut(s)	364, 1054
BfuI	GTATCC	2 cut(s)	374, 1503
BglII	AGATCT	1 cut(s)	1040
BlnI	CCTAGG	1 cut(s)	1252
Bme1390I	CCNGG	4 cut(s)	15, 422, 1489, 1810
Bme18I	GGWCC	1 cut(s)	1806
BmeT110I	CYCGRG	1 cut(s)	705
BmgT120I	GGNCC	1 cut(s)	1806
BmiI	GGNNCC	1 cut(s)	1944
BmrFI	CCNGG	4 cut(s)	15, 422, 1489, 1810
BmrI	ACTGGG	1 cut(s)	76
BmsI	GCATC	8 cut(s)	68, 445, 836, 911, 1681, 1771, 1855, 2268
BmuI	ACTGGG	1 cut(s)	76
BpmI	CTGGAG	5 cut(s)	902, 1328, 1778, 1901, 2046
BpuEI	CTTGAG	1 cut(s)	1097
BpuMI	CCSGG	1 cut(s)	15
BsaJI	CCNNGG	6 cut(s)	42, 189, 711, 969, 1252, 1965
BsaXI	ACNNNNNCTCC	2 cut(s)	1822, 1852
Bsc4I	CCNNNNNNNGG	7 cut(s)	29, 373, 850, 970, 1649, 1849, 2236
Bse1I	ACTGG	7 cut(s)	71, 669, 875, 1311, 1567, 1808, 1884
Bse3DI	GCAATG	4 cut(s)	90, 1022, 1623, 1995
BseBI	CCWGG	3 cut(s)	422, 1489, 1810
BseDI	CCNNGG	6 cut(s)	42, 189, 711, 969, 1252, 1965
BseGI	GGATG	3 cut(s)	385, 1052, 1654
BseLI	CCNNNNNNNGG	7 cut(s)	29, 373, 850, 970, 1649, 1849, 2236
BseMI	GCAATG	4 cut(s)	90, 1022, 1623, 1995
BseMII	CTCAG	5 cut(s)	288, 776, 804, 935, 2232
BseNI	ACTGG	7 cut(s)	71, 669, 875, 1311, 1567, 1808, 1884
BseRI	GAGGAG	2 cut(s)	320, 1922
Bsh1285I	CGRYCG	2 cut(s)	125, 466
BshFI	GGCC	5 cut(s)	89, 174, 287, 1183, 1293
BsiEI	CGRYCG	2 cut(s)	125, 466
BsiHKAI	GWGCWC	2 cut(s)	1083, 1354
BsiHKCI	CYCGRG	1 cut(s)	705
BsiSI	CCGG	1 cut(s)	15
BslFI	GGGAC	1 cut(s)	2212
BslI	CCNNNNNNNGG	7 cut(s)	29, 373, 850, 970, 1649, 1849, 2236
BsmAI	GTCTC	3 cut(s)	187, 293, 708
BsmFI	GGGAC	1 cut(s)	2212
BsnI	GGCC	5 cut(s)	89, 174, 287, 1183, 1293
BsoBI	CYCGRG	1 cut(s)	705
Bsp1286I	GDGCHC	2 cut(s)	1083, 1354
Bsp1407I	TGTACA	1 cut(s)	2215
Bsp143I	GATC	9 cut(s)	26, 148, 274, 924, 1040, 1147, 1634, 1942, 2044
BspACI	CCGC	8 cut(s)	86, 131, 514, 653, 854, 1113, 1273, 1771
BspANI	GGCC	5 cut(s)	89, 174, 287, 1183, 1293
BspCNI	CTCAG	5 cut(s)	289, 775, 805, 934, 2233
BspHI	TCATGA	3 cut(s)	451, 1195, 1330
BspLI	GGNNCC	1 cut(s)	1944
BspMAI	CTGCAG	3 cut(s)	417, 702, 2154
BspMI	ACCTGC	2 cut(s)	364, 1054
BspPI	GGATC	5 cut(s)	282, 919, 1142, 1937, 1950
BspQI	GCTCTTC	1 cut(s)	1664
BspTI	CTTAAG	1 cut(s)	1684
BsrDI	GCAATG	4 cut(s)	90, 1022, 1623, 1995
BsrGI	TGTACA	1 cut(s)	2215
BsrI	ACTGG	7 cut(s)	71, 669, 875, 1311, 1567, 1808, 1884
BssECI	CCNNGG	6 cut(s)	42, 189, 711, 969, 1252, 1965
BssMI	GATC	9 cut(s)	26, 148, 274, 924, 1040, 1147, 1634, 1942, 2044
BssT1I	CCWWGG	6 cut(s)	42, 189, 711, 969, 1252, 1965
Bst2UI	CCWGG	3 cut(s)	422, 1489, 1810
Bst4CI	ACNGT	5 cut(s)	126, 471, 1263, 2226, 2322
Bst6I	CTCTTC	2 cut(s)	453, 1664
BstAFI	CTTAAG	1 cut(s)	1684
BstAUI	TGTACA	1 cut(s)	2215
BstC8I	GCNNGC	3 cut(s)	460, 1291, 1824
BstDEI	CTNAG	8 cut(s)	297, 762, 813, 921, 1543, 1778, 1929, 2241
BstEII	GGTNACC	1 cut(s)	2092
BstENI	CCTNNNNNAGG	2 cut(s)	371, 2234
BstF5I	GGATG	3 cut(s)	385, 1052, 1654
BstHHI	GCGC	2 cut(s)	145, 345
BstKTI	GATC	9 cut(s)	29, 151, 277, 927, 1043, 1150, 1637, 1945, 2047
BstMAI	GTCTC	3 cut(s)	187, 293, 708
BstMBI	GATC	9 cut(s)	26, 148, 274, 924, 1040, 1147, 1634, 1942, 2044
BstMCI	CGRYCG	2 cut(s)	125, 466
BstMWI	GCNNNNNNNGC	8 cut(s)	92, 127, 204, 230, 792, 960, 1768, 2149
BstNI	CCWGG	3 cut(s)	422, 1489, 1810
BstNSI	RCATGY	1 cut(s)	734
BstPI	GGTNACC	1 cut(s)	2092
BstSCI	CCNGG	4 cut(s)	13, 420, 1487, 1808
BstSFI	CTRYAG	4 cut(s)	413, 698, 2150, 2321
BstX2I	RGATCY	5 cut(s)	274, 924, 1040, 1147, 1942
BstYI	RGATCY	5 cut(s)	274, 924, 1040, 1147, 1942
BsuI	GTATCC	2 cut(s)	374, 1503
BsuRI	GGCC	5 cut(s)	89, 174, 287, 1183, 1293
BtgZI	GCGATG	1 cut(s)	1623
BtsCI	GGATG	3 cut(s)	385, 1052, 1654
BtsI	GCAGTG	2 cut(s)	793, 2097
BtsIMutI	CAGTG	7 cut(s)	64, 676, 793, 882, 1304, 1560, 2097
BveI	ACCTGC	2 cut(s)	364, 1054
Cac8I	GCNNGC	3 cut(s)	460, 1291, 1824
CaiI	CAGNNNCTG	1 cut(s)	2230
CciI	TCATGA	3 cut(s)	451, 1195, 1330
CfoI	GCGC	2 cut(s)	145, 345
Cfr13I	GGNCC	1 cut(s)	1806
CsiI	ACCWGGT	1 cut(s)	1487
Csp6I	GTAC	5 cut(s)	734, 767, 986, 2216, 2222
CspCI	CAANNNNNGTGG	2 cut(s)	2184, 2219
CviAII	CATG	7 cut(s)	452, 577, 718, 731, 1196, 1331, 2213
CviQI	GTAC	5 cut(s)	734, 767, 986, 2216, 2222
DdeI	CTNAG	8 cut(s)	297, 762, 813, 921, 1543, 1778, 1929, 2241
DpnI	GATC	9 cut(s)	28, 150, 276, 926, 1042, 1149, 1636, 1944, 2046
DpnII	GATC	9 cut(s)	26, 148, 274, 924, 1040, 1147, 1634, 1942, 2044
EaeI	YGGCCR	2 cut(s)	87, 1181
Eam1104I	CTCTTC	2 cut(s)	453, 1664
EarI	CTCTTC	2 cut(s)	453, 1664
EciI	GGCGGA	2 cut(s)	1288, 1786
Eco130I	CCWWGG	6 cut(s)	42, 189, 711, 969, 1252, 1965
Eco47I	GGWCC	1 cut(s)	1806
Eco57I	CTGAAG	2 cut(s)	353, 1572
Eco88I	CYCGRG	1 cut(s)	705
Eco91I	GGTNACC	1 cut(s)	2092
EcoNI	CCTNNNNNAGG	2 cut(s)	371, 2234
EcoO65I	GGTNACC	1 cut(s)	2092
EcoRI	GAATTC	2 cut(s)	1004, 1314
EcoRII	CCWGG	3 cut(s)	420, 1487, 1808
EcoT14I	CCWWGG	6 cut(s)	42, 189, 711, 969, 1252, 1965
ErhI	CCWWGG	6 cut(s)	42, 189, 711, 969, 1252, 1965
FaeI	CATG	7 cut(s)	455, 580, 721, 734, 1199, 1334, 2216
FalI	AAGNNNNNCTT	6 cut(s)	222, 254, 1120, 1152, 2292, 2324
FaqI	GGGAC	1 cut(s)	2212
FatI	CATG	7 cut(s)	451, 576, 717, 730, 1195, 1330, 2212
FblI	GTMKAC	2 cut(s)	327, 1157
FokI	GGATG	3 cut(s)	392, 1059, 1661
FspBI	CTAG	6 cut(s)	389, 1038, 1253, 1502, 1614, 1934
GlaI	GCGC	2 cut(s)	144, 344
GsuI	CTGGAG	5 cut(s)	902, 1328, 1778, 1901, 2046
HaeIII	GGCC	5 cut(s)	89, 174, 287, 1183, 1293
HapII	CCGG	1 cut(s)	15
HhaI	GCGC	2 cut(s)	145, 345
Hin1II	CATG	7 cut(s)	455, 580, 721, 734, 1199, 1334, 2216
Hin6I	GCGC	2 cut(s)	143, 343
HinP1I	GCGC	2 cut(s)	143, 343
HincII	GTYRAC	1 cut(s)	1341
HindII	GTYRAC	1 cut(s)	1341
HindIII	AAGCTT	4 cut(s)	801, 1187, 2049, 2141
HinfI	GANTC	9 cut(s)	153, 250, 281, 665, 721, 1211, 1280, 1774, 2005
HpaII	CCGG	1 cut(s)	15
HphI	GGTGA	3 cut(s)	1268, 2099, 2241
Hpy166II	GTNNAC	9 cut(s)	270, 328, 676, 728, 1158, 1223, 1259, 1341, 1619
Hpy8I	GTNNAC	9 cut(s)	270, 328, 676, 728, 1158, 1223, 1259, 1341, 1619
Hpy99I	CGWCG	1 cut(s)	116
HpyAV	CCTTC	2 cut(s)	377, 1867
HpyCH4III	ACNGT	5 cut(s)	126, 471, 1263, 2226, 2322
HpyCH4IV	ACGT	2 cut(s)	1122, 1297
HpyF10VI	GCNNNNNNNGC	8 cut(s)	92, 127, 204, 230, 792, 960, 1768, 2149
HpyF3I	CTNAG	8 cut(s)	297, 762, 813, 921, 1543, 1778, 1929, 2241
HpySE526I	ACGT	2 cut(s)	1122, 1297
Hsp92II	CATG	7 cut(s)	455, 580, 721, 734, 1199, 1334, 2216
HspAI	GCGC	2 cut(s)	143, 343
Kzo9I	GATC	9 cut(s)	26, 148, 274, 924, 1040, 1147, 1634, 1942, 2044
LguI	GCTCTTC	1 cut(s)	1664
LmnI	GCTCC	5 cut(s)	32, 160, 340, 1735, 1759
LweI	GCATC	8 cut(s)	68, 445, 836, 911, 1681, 1771, 1855, 2268
MabI	ACCWGGT	1 cut(s)	1487
MaeI	CTAG	6 cut(s)	389, 1038, 1253, 1502, 1614, 1934
MaeII	ACGT	2 cut(s)	1122, 1297
MaeIII	GTNAC	7 cut(s)	938, 1723, 1924, 1960, 1969, 2092, 2125
MalI	GATC	9 cut(s)	28, 150, 276, 926, 1042, 1149, 1636, 1944, 2046
MboI	GATC	9 cut(s)	26, 148, 274, 924, 1040, 1147, 1634, 1942, 2044
MboII	GAAGA	7 cut(s)	440, 750, 1101, 1412, 1651, 1667, 1705
MflI	RGATCY	5 cut(s)	274, 924, 1040, 1147, 1942
MhlI	GDGCHC	2 cut(s)	1083, 1354
MroXI	GAANNNNTTC	3 cut(s)	234, 254, 2082
MseI	TTAA	6 cut(s)	399, 747, 870, 1265, 1482, 1685
MslI	CAYNNNNRTG	3 cut(s)	335, 1365, 1976
MspA1I	CMGCKG	1 cut(s)	1976
MspCI	CTTAAG	1 cut(s)	1684
MspI	CCGG	1 cut(s)	15
MspR9I	CCNGG	4 cut(s)	15, 422, 1489, 1810
MvaI	CCWGG	3 cut(s)	422, 1489, 1810
MwoI	GCNNNNNNNGC	8 cut(s)	92, 127, 204, 230, 792, 960, 1768, 2149
NciI	CCSGG	1 cut(s)	15
NdeII	GATC	9 cut(s)	26, 148, 274, 924, 1040, 1147, 1634, 1942, 2044
NlaIII	CATG	7 cut(s)	455, 580, 721, 734, 1199, 1334, 2216
NlaIV	GGNNCC	1 cut(s)	1944
NmuCI	GTSAC	3 cut(s)	938, 1924, 1969
NspI	RCATGY	1 cut(s)	734
OliI	CACNNNNGTG	1 cut(s)	1976
PaeR7I	CTCGAG	1 cut(s)	705
PagI	TCATGA	3 cut(s)	451, 1195, 1330
PaqCI	CACCTGC	1 cut(s)	364
PciI	ACATGT	1 cut(s)	730
PciSI	GCTCTTC	1 cut(s)	1664
PdmI	GAANNNNTTC	3 cut(s)	234, 254, 2082
PfeI	GAWTC	9 cut(s)	153, 250, 281, 665, 721, 1211, 1280, 1774, 2005
PflMI	CCANNNNNTGG	1 cut(s)	1649
PfoI	TCCNGGA	1 cut(s)	1808
PscI	ACATGT	1 cut(s)	730
Psp6I	CCWGG	3 cut(s)	420, 1487, 1808
PspEI	GGTNACC	1 cut(s)	2092
PspGI	CCWGG	3 cut(s)	420, 1487, 1808
PspN4I	GGNNCC	1 cut(s)	1944
PspPI	GGNCC	1 cut(s)	1806
PstI	CTGCAG	3 cut(s)	417, 702, 2154
PstNI	CAGNNNCTG	1 cut(s)	2230
PsuI	RGATCY	5 cut(s)	274, 924, 1040, 1147, 1942
PvuII	CAGCTG	1 cut(s)	1976
RsaI	GTAC	5 cut(s)	735, 768, 987, 2217, 2223
RsaNI	GTAC	5 cut(s)	734, 767, 986, 2216, 2222
RseI	CAYNNNNRTG	3 cut(s)	335, 1365, 1976
SapI	GCTCTTC	1 cut(s)	1664
SaqAI	TTAA	6 cut(s)	399, 747, 870, 1265, 1482, 1685
Sau3AI	GATC	9 cut(s)	26, 148, 274, 924, 1040, 1147, 1634, 1942, 2044
Sau96I	GGNCC	1 cut(s)	1806
ScrFI	CCNGG	4 cut(s)	15, 422, 1489, 1810
SduI	GDGCHC	2 cut(s)	1083, 1354
SexAI	ACCWGGT	1 cut(s)	1487
SfaNI	GCATC	8 cut(s)	68, 445, 836, 911, 1681, 1771, 1855, 2268
SfcI	CTRYAG	4 cut(s)	413, 698, 2150, 2321
Sfr274I	CTCGAG	1 cut(s)	705
SinI	GGWCC	1 cut(s)	1806
SlaI	CTCGAG	1 cut(s)	705
SmiMI	CAYNNNNRTG	3 cut(s)	335, 1365, 1976
SmlI	CTYRAG	3 cut(s)	705, 1076, 1684
SmoI	CTYRAG	3 cut(s)	705, 1076, 1684
SsiI	CCGC	8 cut(s)	86, 131, 514, 653, 854, 1113, 1273, 1771
SspI	AATATT	3 cut(s)	550, 1207, 2200
SspMI	CTAG	6 cut(s)	389, 1038, 1253, 1502, 1614, 1934
StyD4I	CCNGG	4 cut(s)	13, 420, 1487, 1808
StyI	CCWWGG	6 cut(s)	42, 189, 711, 969, 1252, 1965
TaaI	ACNGT	5 cut(s)	126, 471, 1263, 2226, 2322
TaiI	ACGT	2 cut(s)	1125, 1300
TaqI	TCGA	5 cut(s)	151, 706, 1354, 1584, 1707
TaqII	GACCGA	2 cut(s)	480, 1912
TatI	WGTACW	4 cut(s)	733, 985, 2215, 2221
TauI	GCSGC	3 cut(s)	89, 133, 857
TfiI	GAWTC	9 cut(s)	153, 250, 281, 665, 721, 1211, 1280, 1774, 2005
Tru1I	TTAA	6 cut(s)	399, 747, 870, 1265, 1482, 1685
Tru9I	TTAA	6 cut(s)	399, 747, 870, 1265, 1482, 1685
TscAI	CASTG	7 cut(s)	71, 676, 793, 882, 1311, 1567, 2104
TseFI	GTSAC	3 cut(s)	938, 1924, 1969
Tsp45I	GTSAC	3 cut(s)	938, 1924, 1969
TspGWI	ACGGA	4 cut(s)	287, 833, 1337, 2182
TspRI	CASTG	7 cut(s)	71, 676, 793, 882, 1311, 1567, 2104
Van91I	CCANNNNNTGG	1 cut(s)	1649
Vha464I	CTTAAG	1 cut(s)	1684
VpaK11BI	GGWCC	1 cut(s)	1806
XagI	CCTNNNNNAGG	2 cut(s)	371, 2234
XapI	RAATTY	5 cut(s)	497, 559, 686, 1004, 1314
XbaI	TCTAGA	2 cut(s)	388, 1501
XceI	RCATGY	1 cut(s)	734
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1876
XhoI	CTCGAG	1 cut(s)	705
XmaJI	CCTAGG	1 cut(s)	1252
XmiI	GTMKAC	2 cut(s)	327, 1157
XmnI	GAANNNNTTC	3 cut(s)	234, 254, 2082
XspI	CTAG	6 cut(s)	389, 1038, 1253, 1502, 1614, 1934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.