FvH4_1g11200

Pre-rRNA-processing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
6116329 .. 6120280
3952 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g11200.t2

Sequence Viewer

Length: 2100 bp
ATGGGGTCGAAGAAGAACAAGAAGAACAAGAACGGAGAGAAGAACCTCATCACCGATCCCCGATTCGCCTCCGTCCACTGGGACCCGCGGTTCAAAAATGCTCCGAAGCACAAGGCCAAGGTCCAGATCGACGACCGCTTCAAGGCCATGTTCACCGATCCCCAATTCGCTTCGTCATCGGCTCCGTCGGACAAGCGCGGCAAGCCCAAGAAGAAGGCCGACCCCGGCGAGATGATGCGGCAGTACTACCAGACCAACGAGGAGGAGGAGGAGGAGGTCAAGTACGATAAGATCAAAGAGGACGAGGAAGAAGAAGAAGACGAATTGAGCGAGGAAGAGAGTGAGAGTGAGGAGGAGGAAGAAGAGAAGGTGAAATTGGGAGTGGAGGAGAGCGAGAGTGAGGAATTGGAGGAGGATGACGTGGCCGGAAGCGAATCGGAGACGACGACGGGGACTGATACAGATGATGATGAGGATGATGAGGTGGTACTGGAGGACGGTATGCCAGCAATGCAGAATGAAAATATACCGCAAATCGAGAAGGAAACTCACAGGCTTGCTGTTGTTAACTTGGATTGGAGGTATGTTAAGGCTGTTGACTTGTTTGTGGTGTTGAGGTCATTTCTTCCGAAAGGTGGAGAAATTAAGTCTGTTGCTGTGTATCCATCGGACTTTGGAATCGAGCGTATGAAACAGGAAGAAATTCATGGTCCTGTTGGGCTTTTTGATGATAAAGATAAGGAAAGTGATGAAGAAAGTGACGACGACGAAGATGAAGAGCTTATTAATCAGAAAATGCGTGCTTATGAGAAAAGCCGGCTGAGGTACTACTATGCTGTAGTGGAATGTGACTCAGTTGCCACAGCAGATTACCTTTATAGAAATTGTGATGGAGTTGAGTTTGAAAGGTCATCAAATACTCTTGATTTAAGATTCATCCCTGATTCATTGGAAATTAAGCATCCACCCCGTGATACTGCAACTGAGGTACCTTCAAACTATGTTGGTTTGGACTTCCAAACTAGAGCACTGCAGCAAAGTAAAATTGATATTTCATGGGATGAGGATGAACCAGGGCGAAGGACCTTGAAACGAAAATTCACTGCTGATCAGCTTGATGAACTGGAAATGAAAGAGTTTTTGGCTTCTGATGAGAGTGAAAGTGATGAGGCCGAGGATGAAGCTGAAGATGAGGCAGAGGATAAGCCTGATAAAAAGAGTAAGAAAAGAGATATGTACCGTGCTTTAATCCAGTCTGGAGATGGGAATGGTTCAGATGAGAATGGTGAAGAGGATGGCCAGGATATGGAGGTCACATTTAATACTGGCTTGGAGGATTTAAGCAAGCGCATTCTTGAAAAGAAGGACAAGGGATCAGAAACAGTTTGGGATGCCTATCTCAGAAAAAGACGTGAGAAAAAGAAGCTTAAGAGAAATAGGTCTAATGATTCGTCAGATGATGAGAGTAGTGATTCTGATCAAGAAGCAAAAGAAGAGCCAGATGATTTCTTCATTGAAGAACCTTCCGTTAAAAAGAGTAAAAAGGAGTCTCGGGGTAAAAGTAACAGAGAAGAAAAGCAGCGACAAGATACGGATAAGGAAGCAGAAGCAAGTAGACATGAGCTTGAGTTATTACTTGCTGATGACAAGGGAGTAGATAAAGGTGCAAAGGGATACAATTTGAAACGTAAAAAGGCGAAAGGAAAGAAAGGTAAAGAAGATCCAGAGGAGAACAAAATACCACTTGCTGATTTGGAAGATCCACGCTTTGCACCCCTGTTCACCTCATCCCTCTTTGCTCTGGATCCGACAGATCCACAATTCAAAAGGAGTGCAACATATATCCGGCAGGCAGCACTCAAACAGCGTAAGAGTGACCCAGAAGAGGTGCTGGAAAGGGAAGTGAAAGTACAACCCGAGGGTCCCTCATCAAAGATGGAAAAATCTTCATTAATCAAGTCAATCAAAATGAAAGCCAAGCCCTTTGAAAAGAAAGAGGAAATTGTGCAATTCCCAGGTAGAAAGGAAACAAAAGTGGAGCAGAATCCTCCAACCTCAGTACAACCAGTTAAAAAGAAGTCCAAAGTTGGACGAAAATGA

Protein Analysis

700

Amino Acids

80.38

Weight (kDa)

4.76

Isoelectric Point (pI)

56.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_ESF1 PF25121 1 - 99 7.8e-36 ESF1 RRM domain
NUC153 PF08159 358 - 381 7e-08 NUC153 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010044)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 988
AccB1I GGYRCC 1 cut(s) 988
AccB7I CCANNNNNTGG 1 cut(s) 1306
AccI GTMKAC 1 cut(s) 1615
AccII CGCG 2 cut(s) 88, 198
AciI CCGC 6 cut(s) 86, 88, 136, 198, 238, 530
AclWI GGATC 8 cut(s) 50, 152, 1381, 1715, 1754, 1799, 1808, 1812
AcoI YGGCCR 2 cut(s) 423, 1297
AcsI RAATTY 2 cut(s) 702, 1097
AcuI CTGAAG 1 cut(s) 1206
AdeI CACNNNGTG 1 cut(s) 971
AfaI GTAC 8 cut(s) 245, 284, 489, 827, 990, 1238, 1911, 2061
AfiI CCNNNNNNNGG 5 cut(s) 78, 142, 635, 1306, 1885
AflII CTTAAG 1 cut(s) 1427
AjiI CACGTC 2 cut(s) 421, 1412
AjnI CCWGG 3 cut(s) 1072, 1299, 2014
AjuI GAANNNNNNNTTGG 4 cut(s) 359, 391, 1124, 1156
AloI GAACNNNNNNTCC 2 cut(s) 74, 106
AluBI AGCT 5 cut(s) 781, 1114, 1184, 1426, 1624
AluI AGCT 5 cut(s) 781, 1114, 1184, 1426, 1624
Alw21I GWGCWC 1 cut(s) 1030
Alw26I GTCTC 2 cut(s) 434, 1554
AlwI GGATC 8 cut(s) 50, 152, 1381, 1715, 1754, 1799, 1808, 1812
Ama87I CYCGRG 2 cut(s) 1551, 1916
AoxI GGCC 6 cut(s) 114, 144, 216, 423, 1170, 1297
ApeKI GCWGC 3 cut(s) 1033, 1579, 1853
ApoI RAATTY 2 cut(s) 702, 1097
AseI ATTAAT 2 cut(s) 786, 1952
Asp700I GAANNNNTTC 1 cut(s) 702
Asp718I GGTACC 1 cut(s) 988
AspLEI GCGC 2 cut(s) 198, 1350
AspS9I GGNCC 5 cut(s) 82, 121, 710, 1083, 1922
AsuC2I CCSGG 1 cut(s) 225
AsuHPI GGTGA 5 cut(s) 43, 145, 382, 1298, 1774
AvaI CYCGRG 2 cut(s) 1551, 1916
AvaII GGWCC 5 cut(s) 82, 121, 710, 1083, 1922
BaeI ACNNNNGTAYC 2 cut(s) 972, 1005
BalI TGGCCA 1 cut(s) 1299
BamHI GGATCC 1 cut(s) 1804
BanI GGYRCC 1 cut(s) 988
BarI GAAGNNNNNNTAC 2 cut(s) 1893, 1925
BbsI GAAGAC 1 cut(s) 324
Bbv12I GWGCWC 1 cut(s) 1030
BbvCI CCTCAGC 1 cut(s) 821
BbvI GCAGC 3 cut(s) 1045, 1591, 1865
BccI CCATC 5 cut(s) 673, 884, 1256, 1289, 1930
BciT130I CCWGG 3 cut(s) 1074, 1301, 2016
BciVI GTATCC 2 cut(s) 672, 1667
BclI TGATCA 2 cut(s) 1108, 1477
BcnI CCSGG 1 cut(s) 225
BcoDI GTCTC 2 cut(s) 434, 1554
BfaI CTAG 1 cut(s) 1023
BfmI CTRYAG 2 cut(s) 837, 1031
BfrI CTTAAG 1 cut(s) 1427
BfuI GTATCC 2 cut(s) 672, 1667
BisI GCNGC 5 cut(s) 199, 239, 1034, 1580, 1854
BlsI GCNGC 5 cut(s) 200, 240, 1035, 1581, 1855
BmcAI AGTACT 1 cut(s) 245
Bme1390I CCNGG 4 cut(s) 225, 1074, 1301, 2016
Bme18I GGWCC 5 cut(s) 82, 121, 710, 1083, 1922
BmeT110I CYCGRG 2 cut(s) 1551, 1916
BmgBI CACGTC 2 cut(s) 421, 1412
BmgT120I GGNCC 5 cut(s) 82, 121, 710, 1083, 1922
BmiI GGNNCC 7 cut(s) 83, 84, 183, 990, 1806, 1923, 1924
BmrFI CCNGG 4 cut(s) 225, 1074, 1301, 2016
BmrI ACTGGG 1 cut(s) 88
BmsI GCATC 3 cut(s) 225, 970, 1381
BmuI ACTGGG 1 cut(s) 88
BpiI GAAGAC 1 cut(s) 324
BplI GAGNNNNNCTC 2 cut(s) 1910, 1942
BpmI CTGGAG 2 cut(s) 512, 1278
Bpu10I CCTNAGC 1 cut(s) 821
BpuEI CTTGAG 1 cut(s) 1646
BpuMI CCSGG 1 cut(s) 225
BsaBI GATNNNNATC 2 cut(s) 1395, 1476
BsaJI CCNNGG 7 cut(s) 86, 117, 223, 1073, 1173, 1917, 2014
BsaXI ACNNNNNCTCC 2 cut(s) 266, 296
Bsc4I CCNNNNNNNGG 5 cut(s) 78, 142, 635, 1306, 1885
Bse118I RCCGGY 1 cut(s) 816
Bse1I ACTGG 6 cut(s) 83, 495, 1128, 1252, 1330, 2066
Bse3DI GCAATG 1 cut(s) 516
Bse8I GATNNNNATC 2 cut(s) 1395, 1476
BseBI CCWGG 3 cut(s) 1074, 1301, 2016
BseDI CCNNGG 7 cut(s) 86, 117, 223, 1073, 1173, 1917, 2014
BseJI GATNNNNATC 2 cut(s) 1395, 1476
BseLI CCNNNNNNNGG 5 cut(s) 78, 142, 635, 1306, 1885
BseMI GCAATG 1 cut(s) 516
BseMII CTCAG 5 cut(s) 812, 867, 975, 1414, 2070
BseNI ACTGG 6 cut(s) 83, 495, 1128, 1252, 1330, 2066
BseXI GCAGC 3 cut(s) 1045, 1591, 1865
Bsh1236I CGCG 2 cut(s) 88, 198
Bsh1285I CGRYCG 1 cut(s) 136
BshFI GGCC 6 cut(s) 116, 146, 218, 425, 1172, 1299
BshNI GGYRCC 1 cut(s) 988
BsiEI CGRYCG 1 cut(s) 136
BsiHKAI GWGCWC 1 cut(s) 1030
BsiHKCI CYCGRG 2 cut(s) 1551, 1916
BsiSI CCGG 4 cut(s) 225, 426, 817, 1846
BslFI GGGAC 3 cut(s) 95, 466, 1908
BslI CCNNNNNNNGG 5 cut(s) 78, 142, 635, 1306, 1885
BsmAI GTCTC 2 cut(s) 434, 1554
BsmBI CGTCTC 1 cut(s) 434
BsmFI GGGAC 3 cut(s) 95, 466, 1908
BsmI GAATGC 1 cut(s) 1350
BsnI GGCC 6 cut(s) 116, 146, 218, 425, 1172, 1299
BsoBI CYCGRG 2 cut(s) 1551, 1916
Bsp1286I GDGCHC 1 cut(s) 1030
BspACI CCGC 6 cut(s) 86, 88, 136, 198, 238, 530
BspANI GGCC 6 cut(s) 116, 146, 218, 425, 1172, 1299
BspCNI CTCAG 5 cut(s) 813, 866, 976, 1413, 2069
BspFNI CGCG 2 cut(s) 88, 198
BspLI GGNNCC 7 cut(s) 83, 84, 183, 990, 1806, 1923, 1924
BspMAI CTGCAG 1 cut(s) 1035
BspPI GGATC 8 cut(s) 50, 152, 1381, 1715, 1754, 1799, 1808, 1812
BspQI GCTCTTC 2 cut(s) 771, 1488
BspT107I GGYRCC 1 cut(s) 988
BspTI CTTAAG 1 cut(s) 1427
BsrDI GCAATG 1 cut(s) 516
BsrFI RCCGGY 1 cut(s) 816
BsrI ACTGG 6 cut(s) 83, 495, 1128, 1252, 1330, 2066
BssAI RCCGGY 1 cut(s) 816
BssECI CCNNGG 7 cut(s) 86, 117, 223, 1073, 1173, 1917, 2014
BssT1I CCWWGG 1 cut(s) 117
Bst2UI CCWGG 3 cut(s) 1074, 1301, 2016
Bst4CI ACNGT 3 cut(s) 500, 1241, 1384
Bst6I CTCTTC 6 cut(s) 330, 357, 771, 1284, 1488, 1878
BstAFI CTTAAG 1 cut(s) 1427
BstC8I GCNNGC 7 cut(s) 203, 507, 558, 801, 818, 1346, 1851
BstDEI CTNAG 5 cut(s) 821, 853, 984, 1400, 2056
BstDSI CCRYGG 1 cut(s) 86
BstFNI CGCG 2 cut(s) 88, 198
BstHHI GCGC 2 cut(s) 198, 1350
BstMAI GTCTC 2 cut(s) 434, 1554
BstMCI CGRYCG 1 cut(s) 136
BstMWI GCNNNNNNNGC 2 cut(s) 202, 511
BstNI CCWGG 3 cut(s) 1074, 1301, 2016
BstSCI CCNGG 4 cut(s) 223, 1072, 1299, 2014
BstSFI CTRYAG 2 cut(s) 837, 1031
BstUI CGCG 2 cut(s) 88, 198
BstV1I GCAGC 3 cut(s) 1045, 1591, 1865
BstV2I GAAGAC 1 cut(s) 324
BstX2I RGATCY 4 cut(s) 1720, 1759, 1804, 1813
BstYI RGATCY 4 cut(s) 1720, 1759, 1804, 1813
BsuI GTATCC 2 cut(s) 672, 1667
BsuRI GGCC 6 cut(s) 116, 146, 218, 425, 1172, 1299
BtgI CCRYGG 1 cut(s) 86
BtrI CACGTC 2 cut(s) 421, 1412
BtsI GCAGTG 2 cut(s) 1028, 1101
BtsIMutI CAGTG 3 cut(s) 76, 1028, 1101
Cac8I GCNNGC 7 cut(s) 203, 507, 558, 801, 818, 1346, 1851
CfoI GCGC 2 cut(s) 198, 1350
Cfr10I RCCGGY 1 cut(s) 816
Cfr13I GGNCC 5 cut(s) 82, 121, 710, 1083, 1922
Cfr42I CCGCGG 1 cut(s) 89
Csp6I GTAC 8 cut(s) 244, 283, 488, 826, 989, 1237, 1910, 2060
CviAII CATG 4 cut(s) 148, 707, 1056, 1619
CviQI GTAC 8 cut(s) 244, 283, 488, 826, 989, 1237, 1910, 2060
DdeI CTNAG 5 cut(s) 821, 853, 984, 1400, 2056
DraIII CACNNNGTG 1 cut(s) 971
EaeI YGGCCR 2 cut(s) 423, 1297
Eam1104I CTCTTC 6 cut(s) 330, 357, 771, 1284, 1488, 1878
EarI CTCTTC 6 cut(s) 330, 357, 771, 1284, 1488, 1878
Eco130I CCWWGG 1 cut(s) 117
Eco47I GGWCC 5 cut(s) 82, 121, 710, 1083, 1922
Eco57I CTGAAG 1 cut(s) 1206
Eco88I CYCGRG 2 cut(s) 1551, 1916
EcoO109I RGGNCCY 3 cut(s) 82, 1083, 1922
EcoRII CCWGG 3 cut(s) 1072, 1299, 2014
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
Esp3I CGTCTC 1 cut(s) 434
FaeI CATG 4 cut(s) 151, 710, 1059, 1622
FaqI GGGAC 3 cut(s) 95, 466, 1908
FatI CATG 4 cut(s) 147, 706, 1055, 1618
FauI CCCGC 1 cut(s) 93
FbaI TGATCA 2 cut(s) 1108, 1477
FblI GTMKAC 1 cut(s) 1615
Fnu4HI GCNGC 5 cut(s) 199, 239, 1034, 1580, 1854
Fsp4HI GCNGC 5 cut(s) 199, 239, 1034, 1580, 1854
FspBI CTAG 1 cut(s) 1023
GlaI GCGC 2 cut(s) 197, 1349
GluI GCNGC 5 cut(s) 199, 239, 1034, 1580, 1854
GsuI CTGGAG 2 cut(s) 512, 1278
HaeIII GGCC 6 cut(s) 116, 146, 218, 425, 1172, 1299
HapII CCGG 4 cut(s) 225, 426, 817, 1846
HhaI GCGC 2 cut(s) 198, 1350
Hin1II CATG 4 cut(s) 151, 710, 1059, 1622
Hin6I GCGC 2 cut(s) 196, 1348
HinP1I GCGC 2 cut(s) 196, 1348
HincII GTYRAC 2 cut(s) 568, 598
HindII GTYRAC 2 cut(s) 568, 598
HindIII AAGCTT 1 cut(s) 1424
HpaI GTTAAC 1 cut(s) 568
HpaII CCGG 4 cut(s) 225, 426, 817, 1846
HphI GGTGA 5 cut(s) 43, 145, 382, 1298, 1774
Hpy166II GTNNAC 6 cut(s) 76, 153, 568, 598, 1616, 1782
Hpy188III TCNNGA 8 cut(s) 124, 538, 923, 1257, 1355, 1481, 1724, 1802
Hpy8I GTNNAC 6 cut(s) 76, 153, 568, 598, 1616, 1782
Hpy99I CGWCG 6 cut(s) 134, 190, 448, 451, 767, 770
HpyAV CCTTC 7 cut(s) 208, 361, 535, 1002, 1074, 1357, 1533
HpyCH4III ACNGT 3 cut(s) 500, 1241, 1384
HpyCH4IV ACGT 3 cut(s) 420, 1411, 1687
HpyCH4V TGCA 7 cut(s) 514, 980, 1033, 1667, 1772, 1835, 2008
HpyF10VI GCNNNNNNNGC 2 cut(s) 202, 511
HpyF3I CTNAG 5 cut(s) 821, 853, 984, 1400, 2056
HpySE526I ACGT 3 cut(s) 420, 1411, 1687
Hsp92II CATG 4 cut(s) 151, 710, 1059, 1622
HspAI GCGC 2 cut(s) 196, 1348
KflI GGGWCCC 2 cut(s) 82, 1922
KpnI GGTACC 1 cut(s) 992
KroI GCCGGC 1 cut(s) 816
KroNI GCCGGC 1 cut(s) 818
Ksp22I TGATCA 2 cut(s) 1108, 1477
KspAI GTTAAC 1 cut(s) 568
KspI CCGCGG 1 cut(s) 89
LguI GCTCTTC 2 cut(s) 771, 1488
LmnI GCTCC 3 cut(s) 106, 187, 2038
Lsp1109I GCAGC 3 cut(s) 1045, 1591, 1865
LweI GCATC 3 cut(s) 225, 970, 1381
MaeI CTAG 1 cut(s) 1023
MaeII ACGT 3 cut(s) 420, 1411, 1687
MaeIII GTNAC 5 cut(s) 758, 848, 1312, 1562, 1874
MflI RGATCY 4 cut(s) 1720, 1759, 1804, 1813
MhlI GDGCHC 1 cut(s) 1030
MlsI TGGCCA 1 cut(s) 1299
MluNI TGGCCA 1 cut(s) 1299
MlyI GAGTC 2 cut(s) 845, 1556
MmeI TCCRAC 4 cut(s) 168, 1832, 2068, 2075
Mox20I TGGCCA 1 cut(s) 1299
MroNI GCCGGC 1 cut(s) 816
MroXI GAANNNNTTC 1 cut(s) 702
MscI TGGCCA 1 cut(s) 1299
Msp20I TGGCCA 1 cut(s) 1299
MspA1I CMGCKG 1 cut(s) 88
MspCI CTTAAG 1 cut(s) 1427
MspI CCGG 4 cut(s) 225, 426, 817, 1846
MspR9I CCNGG 4 cut(s) 225, 1074, 1301, 2016
Mva1269I GAATGC 1 cut(s) 1350
MvaI CCWGG 3 cut(s) 1074, 1301, 2016
MvnI CGCG 2 cut(s) 88, 198
MwoI GCNNNNNNNGC 2 cut(s) 202, 511
NaeI GCCGGC 1 cut(s) 818
NciI CCSGG 1 cut(s) 225
NgoMIV GCCGGC 1 cut(s) 816
NlaIII CATG 4 cut(s) 151, 710, 1059, 1622
NlaIV GGNNCC 7 cut(s) 83, 84, 183, 990, 1806, 1923, 1924
NmeAIII GCCGAG 1 cut(s) 1198
NmuCI GTSAC 4 cut(s) 758, 848, 1312, 1874
PciSI GCTCTTC 2 cut(s) 771, 1488
PcsI WCGNNNNNNNCGW 2 cut(s) 327, 443
PctI GAATGC 1 cut(s) 1350
PdiI GCCGGC 1 cut(s) 818
PdmI GAANNNNTTC 1 cut(s) 702
PfeI GAWTC 8 cut(s) 63, 434, 678, 933, 944, 1448, 1472, 2044
PflMI CCANNNNNTGG 1 cut(s) 1306
PkrI GCNGC 5 cut(s) 200, 240, 1035, 1581, 1855
PleI GAGTC 2 cut(s) 845, 1555
PpsI GAGTC 2 cut(s) 845, 1555
PpuMI RGGWCCY 3 cut(s) 82, 1083, 1922
PshBI ATTAAT 2 cut(s) 786, 1952
Psp5II RGGWCCY 3 cut(s) 82, 1083, 1922
Psp6I CCWGG 3 cut(s) 1072, 1299, 2014
PspGI CCWGG 3 cut(s) 1072, 1299, 2014
PspN4I GGNNCC 7 cut(s) 83, 84, 183, 990, 1806, 1923, 1924
PspPI GGNCC 5 cut(s) 82, 121, 710, 1083, 1922
PspPPI RGGWCCY 3 cut(s) 82, 1083, 1922
PstI CTGCAG 1 cut(s) 1035
PsuI RGATCY 4 cut(s) 1720, 1759, 1804, 1813
RsaI GTAC 8 cut(s) 245, 284, 489, 827, 990, 1238, 1911, 2061
RsaNI GTAC 8 cut(s) 244, 283, 488, 826, 989, 1237, 1910, 2060
SacII CCGCGG 1 cut(s) 89
SapI GCTCTTC 2 cut(s) 771, 1488
SatI GCNGC 5 cut(s) 199, 239, 1034, 1580, 1854
Sau96I GGNCC 5 cut(s) 82, 121, 710, 1083, 1922
ScaI AGTACT 1 cut(s) 245
SchI GAGTC 2 cut(s) 845, 1556
ScrFI CCNGG 4 cut(s) 225, 1074, 1301, 2016
SduI GDGCHC 1 cut(s) 1030
SfaNI GCATC 3 cut(s) 225, 970, 1381
SfcI CTRYAG 2 cut(s) 837, 1031
Sfr303I CCGCGG 1 cut(s) 89
SgrBI CCGCGG 1 cut(s) 89
SinI GGWCC 5 cut(s) 82, 121, 710, 1083, 1922
SmlI CTYRAG 2 cut(s) 1427, 1625
SmoI CTYRAG 2 cut(s) 1427, 1625
SsiI CCGC 6 cut(s) 86, 88, 136, 198, 238, 530
SspMI CTAG 1 cut(s) 1023
StyD4I CCNGG 4 cut(s) 223, 1072, 1299, 2014
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 3 cut(s) 500, 1241, 1384
TaiI ACGT 3 cut(s) 423, 1414, 1690
TaqI TCGA 4 cut(s) 8, 129, 537, 681
TatI WGTACW 3 cut(s) 243, 1909, 2059
TauI GCSGC 2 cut(s) 201, 241
TfiI GAWTC 8 cut(s) 63, 434, 678, 933, 944, 1448, 1472, 2044
TscAI CASTG 3 cut(s) 83, 1035, 1108
TseFI GTSAC 4 cut(s) 758, 848, 1312, 1874
TseI GCWGC 3 cut(s) 1033, 1579, 1853
Tsp45I GTSAC 4 cut(s) 758, 848, 1312, 1874
TspGWI ACGGA 5 cut(s) 48, 61, 174, 1516, 1607
TspRI CASTG 3 cut(s) 83, 1035, 1108
Van91I CCANNNNNTGG 1 cut(s) 1306
Vha464I CTTAAG 1 cut(s) 1427
VpaK11BI GGWCC 5 cut(s) 82, 121, 710, 1083, 1922
VspI ATTAAT 2 cut(s) 786, 1952
XapI RAATTY 2 cut(s) 702, 1097
XcmI CCANNNNNNNNNTGG 1 cut(s) 1259
XmiI GTMKAC 1 cut(s) 1615
XmnI GAANNNNTTC 1 cut(s) 702
XspI CTAG 1 cut(s) 1023
ZrmI AGTACT 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.