Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0010044

Physical Location & Seq

Genomic Coordinates Reverse (-)

10142721 .. 10146197

Gene Structure 3477 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1124600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGGGGAAGAACAAGAAAAACAAGATAAAGAACAAGCTCAAAGAATCCAAGGGCGACGATGAGAACATCATCGCCGATCCTCGGTTTTCGTCCGTGCACTGGGACCCAAGGTTCCAGAACGTTCCCAAGCACAAGGCGAAGGTCGAGATCGACTCGCGGTTCGACCGGATGTTCACGGACAAGCGATTCAGCTCGTCGTCGGCGCCGCTGGACAAGCGAGGCAAGCCGAAGAAGCTCGAGGAGGGCAACTCACTGCGGCAGTACTACAGGATGGAGGAGGAGGACGACGGAGATAAGGCCAAGTCCAAAGCGGAAGACGAAGATAAGACCAAATCGAAAGAGGAAAAGGAAAAGGAAGAGGAGGAGGAAGAGAGTGAGGAGGTGGAGGAATCGGAAGATGACGTGGCCAGTGGTGGCTCGGAGACGGCGACGGATACAGATACCGACACCGATGACGGATATGAAGATGAGGAGGTTGTTTTGGAGGACGGCGCGCCTGGAATTGAGGCGGAAGATATACCGGAAATTGAGAAGGAGACTCACAGACTTGCAATTGTTAATCTGGATTGGAGGCATGTGAAGGCTGTTGACTTGTATGCAGTGTTGAGGTCATTTCTTCCGAAAGGTGGAGAAATGAAGTCTGTAACTGTCTATCCGTCTGAGTTTGGACTCCAGCGTATGAAAGAGGAAGAACTTCATGGTCCTGTTGGCTTATTTGATGACGAAAATGAGAAAAGTGATGAAGATGATGACACCGACGATGAGGATGAGGAGCTTATTGCGCAGAAAATGCGGGCTTATGAGAAAAGCAGGCTAAGGTGGTATTATTTTGCTGTTGTTGAATGTGACTCAATTGCCACAGCGGATTACCTGTACAAAAATTGTGATGGAGTTGAGTTTGAAAGATCATCGAATAAACTTGATTTAAGGTTCATCCCTGACTCGATGGAGTTTAAACACCCACCCCGTGATGTTGCAACAGAGGTACCTGCAAGCTACGGGGGTTTGGATTTCCAGACTCAAGCTCTGCAACATAGTAAAATTGATATTTCTTGGGATGAGGATGAGCCTGGACGCAAGACCTTGAAACGGAAATTCACTGATGATCAGCTTTCTGAATTGGAACTGAAGGAGTATTTGGCTTCTGATGAGAGTGAAAGTGATGAGGAGGAGAATGATGATGCTGCAGAGGACAAGACTGATAAAAAGAGTAAAAAACGAGATATGTACCGTGCTTTACTCCTGTCTGGAGATGGAGATGGAGAAGGAGGAGAAGGAGATGAAGATGCATCAGAAGGAGACGGTGAAGACAACGACCAGGATATGGAGATCACTTTTAATACTGGCTTAGAGGATATAAGCAAGCGCATCCTAGAAAAGAAAGATAAGGGATCAGAAACAGTTTGGGAGTCCTATCTCAGAAAAAGAAGTGAGAAAAGGAAGAATAGGAAAAATAAATCGAAGGACTCATCAGAGGATGAGAGTAGTGACAGTGATCATGAGGCAGCAGATGGACCAGATGATTTCTTTATGGAAGAGCCTTCAGTCGAAAAAACTAAAAAAGGATCTCAAGGTAAAAGTAAAAAGGATAAAAAGCAACAGCAAGATGATAAGGAAGCTGAAGCAAGCAGAAATGAGCTCGAGCTATTACTTGCTGATGACAACGGAGCAGATGCAGGGCCTAAGGGCTACAATTTGAAACGTAAAAAGACCAAGGGAAAGAAGGGTAAAGAGGCTCTAGAAGAGGAGAAAATACCAACCGCTGATTTCGAAGATCCACGGTTTTCGGCACTCTTCACCTCATCTCGCTTTGCTCTGGATCCGACAGATCCGCAGTTCAAAAGGAGTGCCGCTTATGCTCGGCAGGTAGCACTGAGACAGTCAAAGGCAGACCGAGAAGTGCCAGAAAAGGAAGTGAAATCTGATGTTTCACCGTCAAAGATGGAGAAATCATCGTTAATAAAATCGATCAAGATGAAAGCCCAGCCCTTACAAGGTAAGATGCCAAACAAAGAAGAAAATTTGCAGTCCAAAGGGAAGAAGGAAAAGAAAGATAAGCAGGAGGACCCAAGCTTGGCTCATCCGGCGAAGAAACAGAAAAGGACCAAAGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC153

Protein Analysis

705

Amino Acids

80.22

Weight (kDa)

4.81

Isoelectric Point (pI)

55.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_ESF1	PF25121	180 - 327	8.2e-63	ESF1 RRM domain
NUC153	PF08159	592 - 617	2.2e-09	NUC153 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01160
fragaria_vesca	FvH4_1g11200 FvH4_1g11200 FvH4_1g11200 FvH4_1g11200 FvH4_1g11200
malus_domestica	MD02G1124600.v1.1 MD15G1238700.v1.1
prunus_persica	Prupe.7G173800_v2.0.a1
pyrus_communis	pycom02g09730 pycom15g21210
rosa_chinensis	RchiOBHm_Chr2g0098611
rosa_laevigata	RLG00000016812
rosa_multiflora	Rmu_sc0002776.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143850
rosa_rugosa	Rorug02G0073700
rosa_samantha	Rh2AG121300 Rh2BG124900 Rh2CG125900 Rh2DG127000
rosa_wichuraiana	Rw0G004120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	783
Acc36I	ACCTGC	2 cut(s)	997, 1855
Acc65I	GGTACC	1 cut(s)	985
AccB1I	GGYRCC	2 cut(s)	202, 985
AccB7I	CCANNNNNTGG	1 cut(s)	1324
AccII	CGCG	2 cut(s)	157, 494
AclI	AACGTT	1 cut(s)	120
AclWI	GGATC	7 cut(s)	71, 1399, 1573, 1769, 1814, 1823, 1827
AcoI	YGGCCR	1 cut(s)	405
AcsI	RAATTY	2 cut(s)	1094, 2020
AcuI	CTGAAG	3 cut(s)	1148, 1527, 1641
AcyI	GRCGYC	1 cut(s)	203
AdeI	CACNNNGTG	1 cut(s)	968
AfaI	GTAC	4 cut(s)	263, 875, 987, 1229
AfiI	CCNNNNNNNGG	7 cut(s)	81, 99, 626, 1089, 1324, 1994, 2074
AgsI	TTSAA	5 cut(s)	842, 902, 1087, 1699, 1840
AjiI	CACGTC	1 cut(s)	403
AjnI	CCWGG	3 cut(s)	496, 1069, 1317
AjuI	GAANNNNNNNTTGG	2 cut(s)	1121, 1153
AloI	GAACNNNNNNTCC	2 cut(s)	95, 127
Alw21I	GWGCWC	2 cut(s)	99, 1641
Alw26I	GTCTC	4 cut(s)	416, 530, 1293, 1870
Alw44I	GTGCAC	1 cut(s)	95
AlwI	GGATC	7 cut(s)	71, 1399, 1573, 1769, 1814, 1823, 1827
Ama87I	CYCGRG	2 cut(s)	236, 1640
AoxI	GGCC	3 cut(s)	297, 405, 1679
ApaLI	GTGCAC	1 cut(s)	95
ApeKI	GCWGC	2 cut(s)	1184, 1505
ApoI	RAATTY	2 cut(s)	1094, 2020
ArsI	GACNNNNNNTTYG	2 cut(s)	143, 175
AscI	GGCGCGCC	1 cut(s)	492
Asp700I	GAANNNNTTC	1 cut(s)	693
Asp718I	GGTACC	1 cut(s)	985
AspLEI	GCGC	5 cut(s)	205, 494, 496, 784, 1368
AspS9I	GGNCC	6 cut(s)	103, 701, 1514, 1679, 2065, 2103
AsuHPI	GGTGA	3 cut(s)	1316, 1789, 1923
AsuII	TTCGAA	1 cut(s)	1770
AvaI	CYCGRG	2 cut(s)	236, 1640
AvaII	GGWCC	5 cut(s)	103, 701, 1514, 2065, 2103
AxyI	CCTNAGG	1 cut(s)	1683
BaeGI	GKGCMC	1 cut(s)	99
BaeI	ACNNNNGTAYC	2 cut(s)	969, 1002
BalI	TGGCCA	1 cut(s)	407
BamHI	GGATCC	1 cut(s)	1819
BanI	GGYRCC	2 cut(s)	202, 985
BanII	GRGCYC	1 cut(s)	1641
BbsI	GAAGAC	2 cut(s)	321, 1314
Bbv12I	GWGCWC	2 cut(s)	99, 1641
BbvI	GCAGC	2 cut(s)	1171, 1517
BccI	CCATC	7 cut(s)	265, 881, 940, 1247, 1253, 1505, 1936
BceAI	ACGGC	2 cut(s)	441, 505
BciT130I	CCWGG	3 cut(s)	498, 1071, 1319
BciVI	GTATCC	1 cut(s)	427
BclI	TGATCA	2 cut(s)	1105, 1495
BcoDI	GTCTC	4 cut(s)	416, 530, 1293, 1870
BfaI	CTAG	2 cut(s)	1373, 1739
BfmI	CTRYAG	2 cut(s)	265, 1185
BfoI	RGCGCY	1 cut(s)	206
BfuAI	ACCTGC	2 cut(s)	997, 1855
BfuI	GTATCC	1 cut(s)	427
BisI	GCNGC	5 cut(s)	206, 257, 1185, 1506, 1851
BlsI	GCNGC	5 cut(s)	207, 258, 1186, 1507, 1852
BmcAI	AGTACT	1 cut(s)	263
Bme1390I	CCNGG	3 cut(s)	498, 1071, 1319
Bme18I	GGWCC	5 cut(s)	103, 701, 1514, 2065, 2103
BmeT110I	CYCGRG	2 cut(s)	236, 1640
BmgBI	CACGTC	1 cut(s)	403
BmgT120I	GGNCC	6 cut(s)	103, 701, 1514, 1679, 2065, 2103
BmiI	GGNNCC	7 cut(s)	104, 105, 113, 204, 987, 1821, 2067
BmrFI	CCNGG	3 cut(s)	498, 1071, 1319
BmrI	ACTGGG	1 cut(s)	109
BmsI	GCATC	6 cut(s)	1171, 1276, 1298, 1377, 1663, 1992
BmuI	ACTGGG	1 cut(s)	109
BpiI	GAAGAC	2 cut(s)	321, 1314
BplI	GAGNNNNNCTC	4 cut(s)	137, 169, 233, 265
BpmI	CTGGAG	2 cut(s)	656, 1269
Bpu10I	CCTNAGC	1 cut(s)	815
Bpu14I	TTCGAA	1 cut(s)	1770
BpuEI	CTTGAG	2 cut(s)	1005, 1554
Bsa29I	ATCGAT	1 cut(s)	1967
BsaHI	GRCGYC	1 cut(s)	203
BsaJI	CCNNGG	5 cut(s)	48, 80, 107, 1713, 1778
BsaWI	WCCGGW	2 cut(s)	165, 520
Bsc4I	CCNNNNNNNGG	7 cut(s)	81, 99, 626, 1089, 1324, 1994, 2074
Bse1I	ACTGG	3 cut(s)	104, 408, 1348
Bse21I	CCTNAGG	1 cut(s)	1683
BseBI	CCWGG	3 cut(s)	498, 1071, 1319
BseCI	ATCGAT	1 cut(s)	1967
BseDI	CCNNGG	5 cut(s)	48, 80, 107, 1713, 1778
BseGI	GGATG	9 cut(s)	174, 276, 772, 933, 1063, 1069, 1368, 1483, 2080
BseLI	CCNNNNNNNGG	7 cut(s)	81, 99, 626, 1089, 1324, 1994, 2074
BseMII	CTCAG	3 cut(s)	651, 1432, 1865
BseNI	ACTGG	3 cut(s)	104, 408, 1348
BsePI	GCGCGC	1 cut(s)	492
BseSI	GKGCMC	1 cut(s)	99
BseXI	GCAGC	2 cut(s)	1171, 1517
BseYI	CCCAGC	1 cut(s)	1983
Bsh1236I	CGCG	2 cut(s)	157, 494
Bsh1285I	CGRYCG	1 cut(s)	166
BshFI	GGCC	3 cut(s)	299, 407, 1681
BshNI	GGYRCC	2 cut(s)	202, 985
BshVI	ATCGAT	1 cut(s)	1967
BsiEI	CGRYCG	1 cut(s)	166
BsiHKAI	GWGCWC	2 cut(s)	99, 1641
BsiHKCI	CYCGRG	2 cut(s)	236, 1640
BsiSI	CCGG	3 cut(s)	166, 521, 2084
BslFI	GGGAC	1 cut(s)	116
BslI	CCNNNNNNNGG	7 cut(s)	81, 99, 626, 1089, 1324, 1994, 2074
BsmAI	GTCTC	4 cut(s)	416, 530, 1293, 1870
BsmBI	CGTCTC	2 cut(s)	416, 1293
BsmFI	GGGAC	1 cut(s)	116
BsnI	GGCC	3 cut(s)	299, 407, 1681
BsoBI	CYCGRG	2 cut(s)	236, 1640
Bsp119I	TTCGAA	1 cut(s)	1770
Bsp1286I	GDGCHC	2 cut(s)	99, 1641
Bsp1407I	TGTACA	1 cut(s)	873
BspANI	GGCC	3 cut(s)	299, 407, 1681
BspCNI	CTCAG	3 cut(s)	652, 1431, 1866
BspDI	ATCGAT	1 cut(s)	1967
BspFNI	CGCG	2 cut(s)	157, 494
BspHI	TCATGA	1 cut(s)	1498
BspLI	GGNNCC	7 cut(s)	104, 105, 113, 204, 987, 1821, 2067
BspMAI	CTGCAG	1 cut(s)	1189
BspMI	ACCTGC	2 cut(s)	997, 1855
BspPI	GGATC	7 cut(s)	71, 1399, 1573, 1769, 1814, 1823, 1827
BspQI	GCTCTTC	1 cut(s)	1530
BspT104I	TTCGAA	1 cut(s)	1770
BspT107I	GGYRCC	2 cut(s)	202, 985
BsrGI	TGTACA	1 cut(s)	873
BsrI	ACTGG	3 cut(s)	104, 408, 1348
BssECI	CCNNGG	5 cut(s)	48, 80, 107, 1713, 1778
BssHII	GCGCGC	1 cut(s)	492
BssNI	GRCGYC	1 cut(s)	203
BssT1I	CCWWGG	3 cut(s)	48, 107, 1713
Bst2UI	CCWGG	3 cut(s)	498, 1071, 1319
Bst4CI	ACNGT	8 cut(s)	649, 1232, 1304, 1402, 1493, 1782, 1881, 1935
Bst6I	CTCTTC	5 cut(s)	351, 363, 1530, 1737, 1799
BstACI	GRCGYC	1 cut(s)	203
BstAPI	GCANNNNNTGC	1 cut(s)	790
BstAUI	TGTACA	1 cut(s)	873
BstBI	TTCGAA	1 cut(s)	1770
BstC8I	GCNNGC	7 cut(s)	224, 494, 795, 812, 994, 1364, 1627
BstDEI	CTNAG	6 cut(s)	660, 815, 1348, 1418, 1683, 1874
BstDSI	CCRYGG	1 cut(s)	1778
BstF5I	GGATG	9 cut(s)	174, 276, 772, 933, 1063, 1069, 1368, 1483, 2080
BstFNI	CGCG	2 cut(s)	157, 494
BstH2I	RGCGCY	1 cut(s)	206
BstHHI	GCGC	5 cut(s)	205, 494, 496, 784, 1368
BstMAI	GTCTC	4 cut(s)	416, 530, 1293, 1870
BstMCI	CGRYCG	1 cut(s)	166
BstMWI	GCNNNNNNNGC	7 cut(s)	214, 223, 232, 781, 790, 1856, 2084
BstNI	CCWGG	3 cut(s)	498, 1071, 1319
BstNSI	RCATGY	1 cut(s)	578
BstSCI	CCNGG	3 cut(s)	496, 1069, 1317
BstSFI	CTRYAG	2 cut(s)	265, 1185
BstSLI	GKGCMC	1 cut(s)	99
BstUI	CGCG	2 cut(s)	157, 494
BstV1I	GCAGC	2 cut(s)	1171, 1517
BstV2I	GAAGAC	2 cut(s)	321, 1314
BstX2I	RGATCY	4 cut(s)	1565, 1774, 1819, 1828
BstYI	RGATCY	4 cut(s)	1565, 1774, 1819, 1828
Bsu15I	ATCGAT	1 cut(s)	1967
Bsu36I	CCTNAGG	1 cut(s)	1683
BsuI	GTATCC	1 cut(s)	427
BsuRI	GGCC	3 cut(s)	299, 407, 1681
BsuTUI	ATCGAT	1 cut(s)	1967
BtgI	CCRYGG	1 cut(s)	1778
BtgZI	GCGATG	1 cut(s)	55
BtrI	CACGTC	1 cut(s)	403
BtsCI	GGATG	9 cut(s)	174, 276, 772, 933, 1063, 1069, 1368, 1483, 2080
BtsI	GCAGTG	2 cut(s)	251, 606
BtsIMutI	CAGTG	7 cut(s)	97, 251, 415, 606, 1098, 1498, 1871
BveI	ACCTGC	2 cut(s)	997, 1855
Cac8I	GCNNGC	7 cut(s)	224, 494, 795, 812, 994, 1364, 1627
CciI	TCATGA	1 cut(s)	1498
CfoI	GCGC	5 cut(s)	205, 494, 496, 784, 1368
Cfr13I	GGNCC	6 cut(s)	103, 701, 1514, 1679, 2065, 2103
ClaI	ATCGAT	1 cut(s)	1967
CseI	GACGC	1 cut(s)	1083
Csp6I	GTAC	4 cut(s)	262, 874, 986, 1228
CviAII	CATG	3 cut(s)	575, 698, 1499
CviQI	GTAC	4 cut(s)	262, 874, 986, 1228
DdeI	CTNAG	6 cut(s)	660, 815, 1348, 1418, 1683, 1874
DinI	GGCGCC	1 cut(s)	204
DraI	TTTAAA	1 cut(s)	955
DraIII	CACNNNGTG	1 cut(s)	968
EaeI	YGGCCR	1 cut(s)	405
Eam1104I	CTCTTC	5 cut(s)	351, 363, 1530, 1737, 1799
EarI	CTCTTC	5 cut(s)	351, 363, 1530, 1737, 1799
EciI	GGCGGA	1 cut(s)	524
Ecl136II	GAGCTC	1 cut(s)	1639
Eco130I	CCWWGG	3 cut(s)	48, 107, 1713
Eco24I	GRGCYC	1 cut(s)	1641
Eco47I	GGWCC	5 cut(s)	103, 701, 1514, 2065, 2103
Eco53kI	GAGCTC	1 cut(s)	1639
Eco57I	CTGAAG	3 cut(s)	1148, 1527, 1641
Eco81I	CCTNAGG	1 cut(s)	1683
Eco88I	CYCGRG	2 cut(s)	236, 1640
EcoICRI	GAGCTC	1 cut(s)	1639
EcoO109I	RGGNCCY	3 cut(s)	103, 1679, 2065
EcoRII	CCWGG	3 cut(s)	496, 1069, 1317
EcoT14I	CCWWGG	3 cut(s)	48, 107, 1713
EcoT22I	ATGCAT	1 cut(s)	1291
EcoT38I	GRGCYC	1 cut(s)	1641
EgeI	GGCGCC	1 cut(s)	204
EheI	GGCGCC	1 cut(s)	204
ErhI	CCWWGG	3 cut(s)	48, 107, 1713
Esp3I	CGTCTC	2 cut(s)	416, 1293
FaeI	CATG	3 cut(s)	578, 701, 1502
FaqI	GGGAC	1 cut(s)	116
FatI	CATG	3 cut(s)	574, 697, 1498
FauI	CCCGC	1 cut(s)	786
FbaI	TGATCA	2 cut(s)	1105, 1495
Fnu4HI	GCNGC	5 cut(s)	206, 257, 1185, 1506, 1851
FokI	GGATG	9 cut(s)	181, 283, 779, 920, 1070, 1076, 1355, 1490, 2067
FriOI	GRGCYC	1 cut(s)	1641
Fsp4HI	GCNGC	5 cut(s)	206, 257, 1185, 1506, 1851
FspBI	CTAG	2 cut(s)	1373, 1739
FspI	TGCGCA	1 cut(s)	783
GlaI	GCGC	5 cut(s)	204, 493, 495, 783, 1367
GluI	GCNGC	5 cut(s)	206, 257, 1185, 1506, 1851
GsaI	CCCAGC	1 cut(s)	1987
GsuI	CTGGAG	2 cut(s)	656, 1269
HaeII	RGCGCY	1 cut(s)	206
HaeIII	GGCC	3 cut(s)	299, 407, 1681
HapII	CCGG	3 cut(s)	166, 521, 2084
HgaI	GACGC	1 cut(s)	1083
HhaI	GCGC	5 cut(s)	205, 494, 496, 784, 1368
Hin1I	GRCGYC	1 cut(s)	203
Hin1II	CATG	3 cut(s)	578, 701, 1502
Hin6I	GCGC	5 cut(s)	203, 492, 494, 782, 1366
HinP1I	GCGC	5 cut(s)	203, 492, 494, 782, 1366
HincII	GTYRAC	1 cut(s)	589
HindII	GTYRAC	1 cut(s)	589
HindIII	AAGCTT	1 cut(s)	2071
HpaII	CCGG	3 cut(s)	166, 521, 2084
HphI	GGTGA	3 cut(s)	1316, 1789, 1923
Hpy166II	GTNNAC	3 cut(s)	97, 174, 589
Hpy188III	TCNNGA	9 cut(s)	115, 145, 563, 1015, 1248, 1499, 1739, 1817, 1972
Hpy8I	GTNNAC	3 cut(s)	97, 174, 589
Hpy99I	CGWCG	6 cut(s)	59, 199, 202, 290, 433, 761
HpyCH4III	ACNGT	8 cut(s)	649, 1232, 1304, 1402, 1493, 1782, 1881, 1935
HpyCH4IV	ACGT	3 cut(s)	120, 402, 1702
HpyF10VI	GCNNNNNNNGC	7 cut(s)	214, 223, 232, 781, 790, 1856, 2084
HpyF3I	CTNAG	6 cut(s)	660, 815, 1348, 1418, 1683, 1874
HpySE526I	ACGT	3 cut(s)	120, 402, 1702
Hsp92I	GRCGYC	1 cut(s)	203
Hsp92II	CATG	3 cut(s)	578, 701, 1502
HspAI	GCGC	5 cut(s)	203, 492, 494, 782, 1366
KasI	GGCGCC	1 cut(s)	202
KflI	GGGWCCC	1 cut(s)	103
KpnI	GGTACC	1 cut(s)	989
Ksp22I	TGATCA	2 cut(s)	1105, 1495
LguI	GCTCTTC	1 cut(s)	1530
LmnI	GCTCC	2 cut(s)	772, 1667
Lsp1109I	GCAGC	2 cut(s)	1171, 1517
LweI	GCATC	6 cut(s)	1171, 1276, 1298, 1377, 1663, 1992
MaeI	CTAG	2 cut(s)	1373, 1739
MaeII	ACGT	3 cut(s)	120, 402, 1702
MaeIII	GTNAC	3 cut(s)	643, 845, 1487
MfeI	CAATTG	2 cut(s)	552, 852
MflI	RGATCY	4 cut(s)	1565, 1774, 1819, 1828
MhlI	GDGCHC	2 cut(s)	99, 1641
MlsI	TGGCCA	1 cut(s)	407
MluNI	TGGCCA	1 cut(s)	407
Mly113I	GGCGCC	1 cut(s)	203
MlyI	GAGTC	8 cut(s)	146, 532, 663, 842, 935, 1012, 1418, 1460
MmeI	TCCRAC	1 cut(s)	1847
Mox20I	TGGCCA	1 cut(s)	407
Mph1103I	ATGCAT	1 cut(s)	1291
MroXI	GAANNNNTTC	1 cut(s)	693
MscI	TGGCCA	1 cut(s)	407
MseI	TTAA	6 cut(s)	558, 926, 954, 1338, 1958, 2113
Msp20I	TGGCCA	1 cut(s)	407
MspA1I	CMGCKG	3 cut(s)	208, 863, 1763
MspI	CCGG	3 cut(s)	166, 521, 2084
MspR9I	CCNGG	3 cut(s)	498, 1071, 1319
MssI	GTTTAAAC	1 cut(s)	955
MunI	CAATTG	2 cut(s)	552, 852
MvaI	CCWGG	3 cut(s)	498, 1071, 1319
MvnI	CGCG	2 cut(s)	157, 494
MwoI	GCNNNNNNNGC	7 cut(s)	214, 223, 232, 781, 790, 1856, 2084
NarI	GGCGCC	1 cut(s)	203
NlaIII	CATG	3 cut(s)	578, 701, 1502
NlaIV	GGNNCC	7 cut(s)	104, 105, 113, 204, 987, 1821, 2067
NmeAIII	GCCGAG	1 cut(s)	1840
NmuCI	GTSAC	2 cut(s)	845, 1487
NsbI	TGCGCA	1 cut(s)	783
NsiI	ATGCAT	1 cut(s)	1291
NspI	RCATGY	1 cut(s)	578
NspV	TTCGAA	1 cut(s)	1770
PaeR7I	CTCGAG	2 cut(s)	236, 1640
PagI	TCATGA	1 cut(s)	1498
PalAI	GGCGCGCC	1 cut(s)	492
PauI	GCGCGC	1 cut(s)	492
PciSI	GCTCTTC	1 cut(s)	1530
PcsI	WCGNNNNNNNCGW	1 cut(s)	425
PdmI	GAANNNNTTC	1 cut(s)	693
PfeI	GAWTC	3 cut(s)	44, 186, 389
PflMI	CCANNNNNTGG	1 cut(s)	1324
PkrI	GCNGC	5 cut(s)	207, 258, 1186, 1507, 1852
PleI	GAGTC	8 cut(s)	146, 532, 663, 842, 935, 1012, 1417, 1460
PluTI	GGCGCC	1 cut(s)	206
PmeI	GTTTAAAC	1 cut(s)	955
PpsI	GAGTC	8 cut(s)	146, 532, 663, 842, 935, 1012, 1417, 1460
PpuMI	RGGWCCY	2 cut(s)	103, 2065
Psp124BI	GAGCTC	1 cut(s)	1641
Psp1406I	AACGTT	1 cut(s)	120
Psp5II	RGGWCCY	2 cut(s)	103, 2065
Psp6I	CCWGG	3 cut(s)	496, 1069, 1317
PspFI	CCCAGC	1 cut(s)	1983
PspGI	CCWGG	3 cut(s)	496, 1069, 1317
PspN4I	GGNNCC	7 cut(s)	104, 105, 113, 204, 987, 1821, 2067
PspPI	GGNCC	6 cut(s)	103, 701, 1514, 1679, 2065, 2103
PspPPI	RGGWCCY	2 cut(s)	103, 2065
PspXI	VCTCGAGB	2 cut(s)	236, 1640
PstI	CTGCAG	1 cut(s)	1189
PsuI	RGATCY	4 cut(s)	1565, 1774, 1819, 1828
PteI	GCGCGC	1 cut(s)	492
RsaI	GTAC	4 cut(s)	263, 875, 987, 1229
RsaNI	GTAC	4 cut(s)	262, 874, 986, 1228
SacI	GAGCTC	1 cut(s)	1641
SapI	GCTCTTC	1 cut(s)	1530
SaqAI	TTAA	6 cut(s)	558, 926, 954, 1338, 1958, 2113
SatI	GCNGC	5 cut(s)	206, 257, 1185, 1506, 1851
Sau96I	GGNCC	6 cut(s)	103, 701, 1514, 1679, 2065, 2103
ScaI	AGTACT	1 cut(s)	263
SchI	GAGTC	8 cut(s)	146, 532, 663, 842, 935, 1012, 1418, 1460
ScrFI	CCNGG	3 cut(s)	498, 1071, 1319
SduI	GDGCHC	2 cut(s)	99, 1641
SfaNI	GCATC	6 cut(s)	1171, 1276, 1298, 1377, 1663, 1992
SfcI	CTRYAG	2 cut(s)	265, 1185
SfoI	GGCGCC	1 cut(s)	204
Sfr274I	CTCGAG	2 cut(s)	236, 1640
SfuI	TTCGAA	1 cut(s)	1770
SgsI	GGCGCGCC	1 cut(s)	492
SinI	GGWCC	5 cut(s)	103, 701, 1514, 2065, 2103
SlaI	CTCGAG	2 cut(s)	236, 1640
SmlI	CTYRAG	4 cut(s)	236, 1020, 1569, 1640
SmoI	CTYRAG	4 cut(s)	236, 1020, 1569, 1640
SspDI	GGCGCC	1 cut(s)	202
SspMI	CTAG	2 cut(s)	1373, 1739
SstI	GAGCTC	1 cut(s)	1641
StyD4I	CCNGG	3 cut(s)	496, 1069, 1317
StyI	CCWWGG	3 cut(s)	48, 107, 1713
TaaI	ACNGT	8 cut(s)	649, 1232, 1304, 1402, 1493, 1782, 1881, 1935
TaiI	ACGT	3 cut(s)	123, 405, 1705
TaqII	GACCGA	1 cut(s)	1908
TatI	WGTACW	2 cut(s)	261, 873
TauI	GCSGC	3 cut(s)	208, 259, 1853
TfiI	GAWTC	3 cut(s)	44, 186, 389
Tru1I	TTAA	6 cut(s)	558, 926, 954, 1338, 1958, 2113
Tru9I	TTAA	6 cut(s)	558, 926, 954, 1338, 1958, 2113
TscAI	CASTG	7 cut(s)	104, 258, 415, 606, 1105, 1498, 1878
TseFI	GTSAC	2 cut(s)	845, 1487
TseI	GCWGC	2 cut(s)	1184, 1505
Tsp45I	GTSAC	2 cut(s)	845, 1487
TspDTI	ATGAA	8 cut(s)	477, 650, 686, 695, 756, 922, 1296, 1991
TspGWI	ACGGA	8 cut(s)	82, 191, 303, 446, 471, 645, 1105, 1680
TspRI	CASTG	7 cut(s)	104, 258, 415, 606, 1105, 1498, 1878
Van91I	CCANNNNNTGG	1 cut(s)	1324
VneI	GTGCAC	1 cut(s)	95
VpaK11BI	GGWCC	5 cut(s)	103, 701, 1514, 2065, 2103
XapI	RAATTY	2 cut(s)	1094, 2020
XbaI	TCTAGA	1 cut(s)	1738
XceI	RCATGY	1 cut(s)	578
XhoI	CTCGAG	2 cut(s)	236, 1640
XmnI	GAANNNNTTC	1 cut(s)	693
XspI	CTAG	2 cut(s)	1373, 1739
ZrmI	AGTACT	1 cut(s)	263
Zsp2I	ATGCAT	1 cut(s)	1291

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.