Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0010044

Physical Location & Seq

Genomic Coordinates Reverse (-)

10650221 .. 10655272

Gene Structure 5052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG127000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGGGGTCGAAGAAGAAGAACAGGAAGAACAAGAAGGAAGATAACAACATCATCACCGATCCGCGATTCGCCTCCGTCCACTGGGACCCGCGGTTCAAAAATGCTCCGAAGCACAAGGCCAAGGTCGAGATCGACGACCGCTTCAAGGCCATGTTCACCGATCCCCGCTTCGCTTCGTCCTCGGCTCCGTCGGACAAGCGCGGCAAGCTCAAGAAGAAGGCCGACCCGGGCGAGGCGCTGCGCCACTACTATCAGACCAACGAGGACCAAGAGGAGGTCAAGTACGATAAGGTGAATACCAAAGAGGATGAGGAAGAAGACGAATTGAGCGACGAAGAGGTTGAGAGTGAGAAAGAAGCCGAGAAGGTGAATTTGGAAGAGGAGGAGAGTGAGAGTGAGGAGGAAGAAGAGAAGGCGAATCTGGAAGAGGAGGAGAGCGAGAGTGAGGAATTGGAGGAGGATGATGTGGCCGGAAGCGAATCGGAGACGACGACGGATACGGGGACGGATGATGAAGAAGAAGATGAGGTGGTTTTTGAGGACGGTATGCCGGCAATGCAGAACGAAAATATACCTGAAATTGAGAAGGAAACTCACAGGCTTGCTGTTGTTAACCTGGATTGGAGGTATGTTAAGGCTGTTGACTTGTTTGTGGTGTTGAGGTCATTTCTTCCGAAAGGTGGAGAAATGAAGTCTGTTGCTGTGTATCCATCGGACTTTGGAATTCAGCGTATGAAAGAGGAAGAAATTCATGGTCCTGTTGGGCTATTTGATAAGAAAGATGAGGAAGGTGATGAAGAAAGTGATGATGACGATGACAATGACGAGCTTATTAATCAGAAAATGCGTGCTTATGAGAAAAGCCGGCTGAGGTACTACTATGCTGTAGTGGAATGTGACTCAAGTGCCACAGCAGATTACCTTTACAGAAATTGTGATGGAGTTGAGTTTGAAAGGTCATCAAATACTCTTGATCTAAGATTCATCCCTGATTCATTGGAAATTAAGCATCCACCCCGTGATATTGCAACGGAGGTACCTTCAAACTATGTTGGTTTGGACTTCCAAACTAGAGCTCTGCAGCAAAGTAAAATTGATATTTCTTGGGATGAGGATGAACCAGGGCGAAGGACCTTGAAACGAAAATTCACTGCTGATCAGCTTGATGAAATGGAGATGAATGAGTTTTTGGCTTCTGATGAGAGTGAAAGTGATGAGGCCGAGGATGAGGCCGCAGATGATGCAGAGGATAAGCCTGATAAAAAGAGTAAGAAAAGAGATATGTACCGTGCCTTAATCCAGTCTGGAGATGGGGATGGTTCAGATGAGGATGGTGAAGAGGATGGCCAGGATATGGAGGTCACCTTCAATACTGGCTTGGAGGATTTAAGCAAGCGCATTCTTGAAAAGAAGGATAGGGAATCAGAAACAGTTTGGGATGCCTATCTCAGAAAAAGACGTGAGAAAAAGAAGGCTAAGAGAAACAGGTCTAATGATTCATCAGAGGATGAGAGTAGTGATTCTGATCAAGAAGCAAAAGAAGAGCCAGATGATTTCTTCATTGAGGAACCTTCAGTTAAAAAGAGTAAAAAGGAGTCTCGGAGTAAAAGTAACAAAGAAGAAAAGCAGCGCCAAGATATGGAAAAGGAAGCAGAAGCAAGTAGAAATGAGCTTGAGTTATTACTTGCTGATGACAAGGGAGCAGATAAAGGTGTAAAGGGCTACAATTTGAAACGTAAAAAGGCAAAGGGAAAGAAGGGTAAGGAAGTTCCGGAGGAGAACAATATACCAACTGCTGATTTGGAAGATCCACGCTTTGCTGTCATGTTCACCTCACCCCTCTTTGCTCTGGATCCAACAGATCCGCAATTCAAAAGGAGTGCAACATATGCCCGGCAGGCAGCACTGAGACAACGGAATGGTGGCCCAGAGGAAGTGCCAGAAAGGGAAGTAAAAGTACAATCCGAGGGTTTCTCGTCAAAGATAGGGAAATCTTCATTAATCAAATCAATTAAGATGAAAGCCAAGCCCTTCGAAAGGAAAGAGGAAATTTTGCAATTCCAAGGTAAAAAGGAAACAAAAGTTGAGCAGGATCCCCGAACCTTAGTACAACCAGTTAAGAAGAAGGCCAAAGTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC153

Protein Analysis

713

Amino Acids

81.98

Weight (kDa)

4.68

Isoelectric Point (pI)

61.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_ESF1	PF25121	198 - 344	9.6e-62	ESF1 RRM domain
NUC153	PF08159	603 - 626	2.6e-09	NUC153 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01160
fragaria_vesca	FvH4_1g11200 FvH4_1g11200 FvH4_1g11200 FvH4_1g11200 FvH4_1g11200
malus_domestica	MD02G1124600.v1.1 MD15G1238700.v1.1
prunus_persica	Prupe.7G173800_v2.0.a1
pyrus_communis	pycom02g09730 pycom15g21210
rosa_chinensis	RchiOBHm_Chr2g0098611
rosa_laevigata	RLG00000016812
rosa_multiflora	Rmu_sc0002776.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143850
rosa_rugosa	Rorug02G0073700
rosa_samantha	Rh2AG121300 Rh2BG124900 Rh2CG125900 Rh2DG127000
rosa_wichuraiana	Rw0G004120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1036
AccB1I	GGYRCC	1 cut(s)	1036
AccB7I	CCANNNNNTGG	2 cut(s)	1354, 1639
AccII	CGCG	3 cut(s)	64, 91, 201
AccIII	TCCGGA	1 cut(s)	1771
AciI	CCGC	8 cut(s)	62, 89, 91, 139, 166, 201, 1233, 1865
AclWI	GGATC	8 cut(s)	53, 155, 1802, 1847, 1856, 1860, 2087, 2100
AcoI	YGGCCR	2 cut(s)	468, 1345
AcsI	RAATTY	5 cut(s)	370, 723, 747, 1145, 2049
AcuI	CTGAAG	1 cut(s)	1557
AdeI	CACNNNGTG	1 cut(s)	1019
AfaI	GTAC	6 cut(s)	284, 875, 1038, 1286, 1959, 2109
AfiI	CCNNNNNNNGG	8 cut(s)	81, 145, 232, 274, 680, 1354, 1639, 2037
AgsI	TTSAA	9 cut(s)	97, 145, 953, 1044, 1138, 1369, 1406, 1732, 1873
AjiI	CACGTC	1 cut(s)	1460
AjnI	CCWGG	3 cut(s)	615, 1120, 1347
AjuI	GAANNNNNNNTTGG	4 cut(s)	356, 388, 1172, 1204
AloI	GAACNNNNNNTCC	2 cut(s)	77, 109
AluBI	AGCT	5 cut(s)	208, 829, 1076, 1162, 1672
AluI	AGCT	5 cut(s)	208, 829, 1076, 1162, 1672
Alw21I	GWGCWC	1 cut(s)	1078
Alw26I	GTCTC	3 cut(s)	479, 1602, 1903
AlwI	GGATC	8 cut(s)	53, 155, 1802, 1847, 1856, 1860, 2087, 2100
Ama87I	CYCGRG	1 cut(s)	226
Aor13HI	TCCGGA	1 cut(s)	1771
AoxI	GGCC	9 cut(s)	117, 147, 219, 468, 1218, 1230, 1345, 1924, 2127
ApeKI	GCWGC	4 cut(s)	238, 1081, 1627, 1901
ApoI	RAATTY	5 cut(s)	370, 723, 747, 1145, 2049
AseI	ATTAAT	2 cut(s)	834, 2000
Asp700I	GAANNNNTTC	1 cut(s)	747
Asp718I	GGTACC	1 cut(s)	1036
AspLEI	GCGC	5 cut(s)	201, 238, 243, 1398, 1632
AspS9I	GGNCC	5 cut(s)	85, 265, 755, 1131, 1925
AsuC2I	CCSGG	3 cut(s)	227, 228, 1894
AsuHPI	GGTGA	9 cut(s)	46, 148, 304, 379, 803, 1346, 1354, 1822, 1827
AsuII	TTCGAA	1 cut(s)	2034
AvaI	CYCGRG	1 cut(s)	226
AvaII	GGWCC	4 cut(s)	85, 265, 755, 1131
BaeI	ACNNNNGTAYC	2 cut(s)	1020, 1053
BalI	TGGCCA	1 cut(s)	1347
BamHI	GGATCC	2 cut(s)	1852, 2092
BanI	GGYRCC	1 cut(s)	1036
BanII	GRGCYC	1 cut(s)	1078
BarI	GAAGNNNNNNTAC	2 cut(s)	1941, 1973
BbsI	GAAGAC	1 cut(s)	324
Bbv12I	GWGCWC	1 cut(s)	1078
BbvCI	CCTCAGC	1 cut(s)	869
BbvI	GCAGC	4 cut(s)	225, 1093, 1639, 1913
BccI	CCATC	6 cut(s)	718, 932, 1304, 1310, 1325, 1337
BciT130I	CCWGG	3 cut(s)	617, 1122, 1349
BciVI	GTATCC	2 cut(s)	490, 717
BclI	TGATCA	2 cut(s)	1156, 1525
BcnI	CCSGG	3 cut(s)	227, 228, 1894
BcoDI	GTCTC	3 cut(s)	479, 1602, 1903
BfaI	CTAG	1 cut(s)	1071
BfmI	CTRYAG	2 cut(s)	885, 1079
BfoI	RGCGCY	2 cut(s)	239, 1633
BfuI	GTATCC	2 cut(s)	490, 717
BglI	GCCNNNNNGGC	1 cut(s)	1898
BisI	GCNGC	6 cut(s)	202, 239, 1082, 1233, 1628, 1902
BlsI	GCNGC	6 cut(s)	203, 240, 1083, 1234, 1629, 1903
Bme1390I	CCNGG	6 cut(s)	227, 228, 617, 1122, 1349, 1894
Bme18I	GGWCC	4 cut(s)	85, 265, 755, 1131
BmeT110I	CYCGRG	1 cut(s)	226
BmgBI	CACGTC	1 cut(s)	1460
BmgT120I	GGNCC	5 cut(s)	85, 265, 755, 1131, 1925
BmiI	GGNNCC	7 cut(s)	86, 87, 186, 1038, 1569, 1854, 2094
BmrFI	CCNGG	6 cut(s)	227, 228, 617, 1122, 1349, 1894
BmrI	ACTGGG	1 cut(s)	91
BmsI	GCATC	3 cut(s)	1018, 1231, 1429
BmuI	ACTGGG	1 cut(s)	91
BpiI	GAAGAC	1 cut(s)	324
BplI	GAGNNNNNCTC	2 cut(s)	1958, 1990
BpmI	CTGGAG	1 cut(s)	1326
Bpu10I	CCTNAGC	1 cut(s)	869
Bpu14I	TTCGAA	1 cut(s)	2034
BpuEI	CTTGAG	3 cut(s)	194, 886, 1694
BpuMI	CCSGG	3 cut(s)	227, 228, 1894
BsaBI	GATNNNNATC	2 cut(s)	1443, 1524
BsaJI	CCNNGG	8 cut(s)	89, 120, 180, 226, 1121, 1221, 1965, 2062
BsaWI	WCCGGW	1 cut(s)	1771
BsaXI	ACNNNNNCTCC	4 cut(s)	266, 296, 1594, 1624
Bsc4I	CCNNNNNNNGG	8 cut(s)	81, 145, 232, 274, 680, 1354, 1639, 2037
Bse118I	RCCGGY	2 cut(s)	550, 864
Bse1I	ACTGG	4 cut(s)	86, 1300, 1378, 2114
Bse3DI	GCAATG	1 cut(s)	561
Bse8I	GATNNNNATC	2 cut(s)	1443, 1524
BseAI	TCCGGA	1 cut(s)	1771
BseBI	CCWGG	3 cut(s)	617, 1122, 1349
BseDI	CCNNGG	8 cut(s)	89, 120, 180, 226, 1121, 1221, 1965, 2062
BseJI	GATNNNNATC	2 cut(s)	1443, 1524
BseLI	CCNNNNNNNGG	8 cut(s)	81, 145, 232, 274, 680, 1354, 1639, 2037
BseMI	GCAATG	1 cut(s)	561
BseMII	CTCAG	3 cut(s)	860, 1462, 1898
BseNI	ACTGG	4 cut(s)	86, 1300, 1378, 2114
BseRI	GAGGAG	8 cut(s)	287, 395, 398, 413, 443, 446, 470, 1790
BseXI	GCAGC	4 cut(s)	225, 1093, 1639, 1913
Bsh1236I	CGCG	3 cut(s)	64, 91, 201
Bsh1285I	CGRYCG	1 cut(s)	139
BshFI	GGCC	9 cut(s)	119, 149, 221, 470, 1220, 1232, 1347, 1926, 2129
BshNI	GGYRCC	1 cut(s)	1036
BsiEI	CGRYCG	1 cut(s)	139
BsiHKAI	GWGCWC	1 cut(s)	1078
BsiHKCI	CYCGRG	1 cut(s)	226
BsiSI	CCGG	6 cut(s)	227, 471, 551, 865, 1772, 1894
BslFI	GGGAC	2 cut(s)	98, 517
BslI	CCNNNNNNNGG	8 cut(s)	81, 145, 232, 274, 680, 1354, 1639, 2037
BsmAI	GTCTC	3 cut(s)	479, 1602, 1903
BsmBI	CGTCTC	1 cut(s)	479
BsmFI	GGGAC	2 cut(s)	98, 517
BsmI	GAATGC	1 cut(s)	1398
BsnI	GGCC	9 cut(s)	119, 149, 221, 470, 1220, 1232, 1347, 1926, 2129
BsoBI	CYCGRG	1 cut(s)	226
Bsp119I	TTCGAA	1 cut(s)	2034
Bsp1286I	GDGCHC	1 cut(s)	1078
Bsp13I	TCCGGA	1 cut(s)	1771
BspACI	CCGC	8 cut(s)	62, 89, 91, 139, 166, 201, 1233, 1865
BspANI	GGCC	9 cut(s)	119, 149, 221, 470, 1220, 1232, 1347, 1926, 2129
BspCNI	CTCAG	3 cut(s)	861, 1461, 1899
BspEI	TCCGGA	1 cut(s)	1771
BspFNI	CGCG	3 cut(s)	64, 91, 201
BspLI	GGNNCC	7 cut(s)	86, 87, 186, 1038, 1569, 1854, 2094
BspMAI	CTGCAG	1 cut(s)	1083
BspPI	GGATC	8 cut(s)	53, 155, 1802, 1847, 1856, 1860, 2087, 2100
BspQI	GCTCTTC	1 cut(s)	1536
BspT104I	TTCGAA	1 cut(s)	2034
BspT107I	GGYRCC	1 cut(s)	1036
BsrDI	GCAATG	1 cut(s)	561
BsrFI	RCCGGY	2 cut(s)	550, 864
BsrI	ACTGG	4 cut(s)	86, 1300, 1378, 2114
BssAI	RCCGGY	2 cut(s)	550, 864
BssECI	CCNNGG	8 cut(s)	89, 120, 180, 226, 1121, 1221, 1965, 2062
BssT1I	CCWWGG	2 cut(s)	120, 2062
Bst2UI	CCWGG	3 cut(s)	617, 1122, 1349
Bst4CI	ACNGT	3 cut(s)	545, 1289, 1432
Bst6I	CTCTTC	6 cut(s)	330, 372, 402, 420, 1332, 1536
BstAPI	GCANNNNNTGC	2 cut(s)	1241, 1889
BstBI	TTCGAA	1 cut(s)	2034
BstC8I	GCNNGC	7 cut(s)	206, 552, 603, 849, 866, 1394, 1899
BstDEI	CTNAG	6 cut(s)	869, 977, 1448, 1476, 1907, 2104
BstDSI	CCRYGG	1 cut(s)	89
BstEII	GGTNACC	1 cut(s)	1360
BstENI	CCTNNNNNAGG	1 cut(s)	2035
BstFNI	CGCG	3 cut(s)	64, 91, 201
BstH2I	RGCGCY	2 cut(s)	239, 1633
BstHHI	GCGC	5 cut(s)	201, 238, 243, 1398, 1632
BstMAI	GTCTC	3 cut(s)	479, 1602, 1903
BstMCI	CGRYCG	1 cut(s)	139
BstMWI	GCNNNNNNNGC	5 cut(s)	205, 556, 1241, 1889, 1898
BstNI	CCWGG	3 cut(s)	617, 1122, 1349
BstPI	GGTNACC	1 cut(s)	1360
BstSCI	CCNGG	6 cut(s)	225, 226, 615, 1120, 1347, 1892
BstSFI	CTRYAG	2 cut(s)	885, 1079
BstUI	CGCG	3 cut(s)	64, 91, 201
BstV1I	GCAGC	4 cut(s)	225, 1093, 1639, 1913
BstV2I	GAAGAC	1 cut(s)	324
BstX2I	RGATCY	4 cut(s)	1807, 1852, 1861, 2092
BstYI	RGATCY	4 cut(s)	1807, 1852, 1861, 2092
BsuI	GTATCC	2 cut(s)	490, 717
BsuRI	GGCC	9 cut(s)	119, 149, 221, 470, 1220, 1232, 1347, 1926, 2129
BtgI	CCRYGG	1 cut(s)	89
BtrI	CACGTC	1 cut(s)	1460
BtsI	GCAGTG	1 cut(s)	1149
BtsIMutI	CAGTG	3 cut(s)	79, 1149, 1904
Cac8I	GCNNGC	7 cut(s)	206, 552, 603, 849, 866, 1394, 1899
CfoI	GCGC	5 cut(s)	201, 238, 243, 1398, 1632
Cfr10I	RCCGGY	2 cut(s)	550, 864
Cfr13I	GGNCC	5 cut(s)	85, 265, 755, 1131, 1925
Cfr42I	CCGCGG	1 cut(s)	92
Cfr9I	CCCGGG	1 cut(s)	226
Csp6I	GTAC	6 cut(s)	283, 874, 1037, 1285, 1958, 2108
CviAII	CATG	3 cut(s)	151, 752, 1825
CviQI	GTAC	6 cut(s)	283, 874, 1037, 1285, 1958, 2108
DdeI	CTNAG	6 cut(s)	869, 977, 1448, 1476, 1907, 2104
DraIII	CACNNNGTG	1 cut(s)	1019
EaeI	YGGCCR	2 cut(s)	468, 1345
Eam1104I	CTCTTC	6 cut(s)	330, 372, 402, 420, 1332, 1536
EarI	CTCTTC	6 cut(s)	330, 372, 402, 420, 1332, 1536
Ecl136II	GAGCTC	1 cut(s)	1076
Eco130I	CCWWGG	2 cut(s)	120, 2062
Eco24I	GRGCYC	1 cut(s)	1078
Eco47I	GGWCC	4 cut(s)	85, 265, 755, 1131
Eco53kI	GAGCTC	1 cut(s)	1076
Eco57I	CTGAAG	1 cut(s)	1557
Eco88I	CYCGRG	1 cut(s)	226
Eco91I	GGTNACC	1 cut(s)	1360
EcoICRI	GAGCTC	1 cut(s)	1076
EcoNI	CCTNNNNNAGG	1 cut(s)	2035
EcoO109I	RGGNCCY	2 cut(s)	85, 1131
EcoO65I	GGTNACC	1 cut(s)	1360
EcoRI	GAATTC	1 cut(s)	723
EcoRII	CCWGG	3 cut(s)	615, 1120, 1347
EcoT14I	CCWWGG	2 cut(s)	120, 2062
EcoT38I	GRGCYC	1 cut(s)	1078
ErhI	CCWWGG	2 cut(s)	120, 2062
Esp3I	CGTCTC	1 cut(s)	479
FaeI	CATG	3 cut(s)	154, 755, 1828
FaqI	GGGAC	2 cut(s)	98, 517
FatI	CATG	3 cut(s)	150, 751, 1824
FauI	CCCGC	2 cut(s)	96, 173
FauNDI	CATATG	1 cut(s)	1888
FbaI	TGATCA	2 cut(s)	1156, 1525
Fnu4HI	GCNGC	6 cut(s)	202, 239, 1082, 1233, 1628, 1902
FriOI	GRGCYC	1 cut(s)	1078
Fsp4HI	GCNGC	6 cut(s)	202, 239, 1082, 1233, 1628, 1902
FspBI	CTAG	1 cut(s)	1071
GlaI	GCGC	5 cut(s)	200, 237, 242, 1397, 1631
GluI	GCNGC	6 cut(s)	202, 239, 1082, 1233, 1628, 1902
GsuI	CTGGAG	1 cut(s)	1326
HaeII	RGCGCY	2 cut(s)	239, 1633
HaeIII	GGCC	9 cut(s)	119, 149, 221, 470, 1220, 1232, 1347, 1926, 2129
HapII	CCGG	6 cut(s)	227, 471, 551, 865, 1772, 1894
HhaI	GCGC	5 cut(s)	201, 238, 243, 1398, 1632
Hin1II	CATG	3 cut(s)	154, 755, 1828
Hin6I	GCGC	5 cut(s)	199, 236, 241, 1396, 1630
HinP1I	GCGC	5 cut(s)	199, 236, 241, 1396, 1630
HincII	GTYRAC	2 cut(s)	613, 643
HindII	GTYRAC	2 cut(s)	613, 643
HpaI	GTTAAC	1 cut(s)	613
HpaII	CCGG	6 cut(s)	227, 471, 551, 865, 1772, 1894
HphI	GGTGA	9 cut(s)	46, 148, 304, 379, 803, 1346, 1354, 1822, 1827
Hpy166II	GTNNAC	5 cut(s)	79, 156, 613, 643, 1830
Hpy188III	TCNNGA	9 cut(s)	127, 211, 422, 971, 1305, 1403, 1529, 1772, 1850
Hpy8I	GTNNAC	5 cut(s)	79, 156, 613, 643, 1830
Hpy99I	CGWCG	5 cut(s)	137, 193, 335, 493, 496
HpyCH4III	ACNGT	3 cut(s)	545, 1289, 1432
HpyCH4IV	ACGT	2 cut(s)	1459, 1735
HpyCH4V	TGCA	6 cut(s)	559, 1028, 1081, 1244, 1883, 2056
HpyF10VI	GCNNNNNNNGC	5 cut(s)	205, 556, 1241, 1889, 1898
HpyF3I	CTNAG	6 cut(s)	869, 977, 1448, 1476, 1907, 2104
HpySE526I	ACGT	2 cut(s)	1459, 1735
Hsp92II	CATG	3 cut(s)	154, 755, 1828
HspAI	GCGC	5 cut(s)	199, 236, 241, 1396, 1630
KflI	GGGWCCC	1 cut(s)	85
Kpn2I	TCCGGA	1 cut(s)	1771
KpnI	GGTACC	1 cut(s)	1040
KroI	GCCGGC	2 cut(s)	550, 864
KroNI	GCCGGC	2 cut(s)	552, 866
Ksp22I	TGATCA	2 cut(s)	1156, 1525
KspAI	GTTAAC	1 cut(s)	613
KspI	CCGCGG	1 cut(s)	92
LguI	GCTCTTC	1 cut(s)	1536
LmnI	GCTCC	3 cut(s)	109, 190, 1700
Lsp1109I	GCAGC	4 cut(s)	225, 1093, 1639, 1913
LweI	GCATC	3 cut(s)	1018, 1231, 1429
MaeI	CTAG	1 cut(s)	1071
MaeII	ACGT	2 cut(s)	1459, 1735
MaeIII	GTNAC	3 cut(s)	896, 1360, 1610
MflI	RGATCY	4 cut(s)	1807, 1852, 1861, 2092
MhlI	GDGCHC	1 cut(s)	1078
MlsI	TGGCCA	1 cut(s)	1347
MluNI	TGGCCA	1 cut(s)	1347
MlyI	GAGTC	2 cut(s)	893, 1604
MmeI	TCCRAC	3 cut(s)	171, 1880, 2116
Mox20I	TGGCCA	1 cut(s)	1347
MroI	TCCGGA	1 cut(s)	1771
MroNI	GCCGGC	2 cut(s)	550, 864
MroXI	GAANNNNTTC	1 cut(s)	747
MscI	TGGCCA	1 cut(s)	1347
Msp20I	TGGCCA	1 cut(s)	1347
MspA1I	CMGCKG	1 cut(s)	91
MspI	CCGG	6 cut(s)	227, 471, 551, 865, 1772, 1894
MspR9I	CCNGG	6 cut(s)	227, 228, 617, 1122, 1349, 1894
MteI	GCGCNGCGC	1 cut(s)	239
Mva1269I	GAATGC	1 cut(s)	1398
MvaI	CCWGG	3 cut(s)	617, 1122, 1349
MvnI	CGCG	3 cut(s)	64, 91, 201
MwoI	GCNNNNNNNGC	5 cut(s)	205, 556, 1241, 1889, 1898
NaeI	GCCGGC	2 cut(s)	552, 866
NciI	CCSGG	3 cut(s)	227, 228, 1894
NdeI	CATATG	1 cut(s)	1888
NgoMIV	GCCGGC	2 cut(s)	550, 864
NlaIII	CATG	3 cut(s)	154, 755, 1828
NlaIV	GGNNCC	7 cut(s)	86, 87, 186, 1038, 1569, 1854, 2094
NmeAIII	GCCGAG	3 cut(s)	161, 385, 1246
NmuCI	GTSAC	2 cut(s)	896, 1360
NspV	TTCGAA	1 cut(s)	2034
PciSI	GCTCTTC	1 cut(s)	1536
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 327, 488
PctI	GAATGC	1 cut(s)	1398
PdiI	GCCGGC	2 cut(s)	552, 866
PdmI	GAANNNNTTC	1 cut(s)	747
PfeI	GAWTC	8 cut(s)	66, 418, 479, 981, 992, 1421, 1496, 1520
PflMI	CCANNNNNTGG	2 cut(s)	1354, 1639
PkrI	GCNGC	6 cut(s)	203, 240, 1083, 1234, 1629, 1903
PleI	GAGTC	2 cut(s)	893, 1603
PpsI	GAGTC	2 cut(s)	893, 1603
PpuMI	RGGWCCY	2 cut(s)	85, 1131
PshBI	ATTAAT	2 cut(s)	834, 2000
Psp124BI	GAGCTC	1 cut(s)	1078
Psp5II	RGGWCCY	2 cut(s)	85, 1131
Psp6I	CCWGG	3 cut(s)	615, 1120, 1347
PspEI	GGTNACC	1 cut(s)	1360
PspGI	CCWGG	3 cut(s)	615, 1120, 1347
PspN4I	GGNNCC	7 cut(s)	86, 87, 186, 1038, 1569, 1854, 2094
PspPI	GGNCC	5 cut(s)	85, 265, 755, 1131, 1925
PspPPI	RGGWCCY	2 cut(s)	85, 1131
PstI	CTGCAG	1 cut(s)	1083
PsuI	RGATCY	4 cut(s)	1807, 1852, 1861, 2092
RsaI	GTAC	6 cut(s)	284, 875, 1038, 1286, 1959, 2109
RsaNI	GTAC	6 cut(s)	283, 874, 1037, 1285, 1958, 2108
SacI	GAGCTC	1 cut(s)	1078
SacII	CCGCGG	1 cut(s)	92
SapI	GCTCTTC	1 cut(s)	1536
SatI	GCNGC	6 cut(s)	202, 239, 1082, 1233, 1628, 1902
Sau96I	GGNCC	5 cut(s)	85, 265, 755, 1131, 1925
SchI	GAGTC	2 cut(s)	893, 1604
ScrFI	CCNGG	6 cut(s)	227, 228, 617, 1122, 1349, 1894
SduI	GDGCHC	1 cut(s)	1078
SfaNI	GCATC	3 cut(s)	1018, 1231, 1429
SfcI	CTRYAG	2 cut(s)	885, 1079
Sfr303I	CCGCGG	1 cut(s)	92
SfuI	TTCGAA	1 cut(s)	2034
SgrBI	CCGCGG	1 cut(s)	92
SinI	GGWCC	4 cut(s)	85, 265, 755, 1131
SmaI	CCCGGG	1 cut(s)	228
SmlI	CTYRAG	3 cut(s)	209, 901, 1673
SmoI	CTYRAG	3 cut(s)	209, 901, 1673
SsiI	CCGC	8 cut(s)	62, 89, 91, 139, 166, 201, 1233, 1865
SspMI	CTAG	1 cut(s)	1071
SstI	GAGCTC	1 cut(s)	1078
StyD4I	CCNGG	6 cut(s)	225, 226, 615, 1120, 1347, 1892
StyI	CCWWGG	2 cut(s)	120, 2062
TaaI	ACNGT	3 cut(s)	545, 1289, 1432
TaiI	ACGT	2 cut(s)	1462, 1738
TaqI	TCGA	4 cut(s)	8, 126, 132, 2034
TatI	WGTACW	2 cut(s)	1957, 2107
TauI	GCSGC	2 cut(s)	204, 1235
TfiI	GAWTC	8 cut(s)	66, 418, 479, 981, 992, 1421, 1496, 1520
TscAI	CASTG	3 cut(s)	86, 1156, 1911
TseFI	GTSAC	2 cut(s)	896, 1360
TseI	GCWGC	4 cut(s)	238, 1081, 1627, 1901
Tsp45I	GTSAC	2 cut(s)	896, 1360
TspGWI	ACGGA	6 cut(s)	64, 177, 509, 521, 1046, 1930
TspMI	CCCGGG	1 cut(s)	226
TspRI	CASTG	3 cut(s)	86, 1156, 1911
Van91I	CCANNNNNTGG	2 cut(s)	1354, 1639
VpaK11BI	GGWCC	4 cut(s)	85, 265, 755, 1131
VspI	ATTAAT	2 cut(s)	834, 2000
XagI	CCTNNNNNAGG	1 cut(s)	2035
XapI	RAATTY	5 cut(s)	370, 723, 747, 1145, 2049
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1307
XmaI	CCCGGG	1 cut(s)	226
XmnI	GAANNNNTTC	1 cut(s)	747
XspI	CTAG	1 cut(s)	1071

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.