Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002776.1

Orthogroup ID

OG0010044

Physical Location & Seq

Genomic Coordinates Reverse (-)

37761 .. 40833

Gene Structure 3073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002776.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

atggggtcgaagaagaagaacaggaagaacaagaaggaagataacaacatcatcaccgatccgcgattcgcctccgtccactgggacccgcggttcaaaaatgctccgaagcacaaggccaaggtcgagatcgacgaccgcttcaaggccatgttcaccgatccccgcttcgcttcgtcctcggctccgtcagataagcgcggcaagctcaagaagaaggccgacccgggcgaggcgctgcgccactactatcagaccaacgaggaccaagaggaggtcaagtacgataaggtgaataccaaagaggatgaggaagaagacgaattgagcgacgaagaggttgagagtgagaaagaagtagagaaggtgaaattggaagaggaggagagtgagagtgaggaggaagaagagaaggcgaatctggaagaggaggagagcgagagtgaggaattggaggaggatgatgtggccagaagcgaatcggagacgacgacgacggatacggggacggatgatgatgaagaagaagatgaggtggtttttgaggacggtatgccggcaatgcagaacgaaaatatacctgaaattgagaaggaaactcacaggcttgctgttgttaacctggattggaggtatgttaaggctgttgacttgtttgtggtgttgaggtcatttcttccgaaaggtggagaaatgaagtctgttgctgtgtatccatcggactttggaattcagcgtatgaaagaggaagaaattcatggtcctgttgggctatttgataagaaagatgaggaaggtgatgaagaaagtgatgatgacgatgacgatgacgagcttattaatcagaaaatgcgtgcttatgagaaaagccggctgaggtactactatgctgtagtggaatgtgactcaattgccacagcagattacctttacagaaattgtgatggagttgagtttgaaaggtcatcaaatactcttgatctaagattcatccctgattcattggaaattaagcatccaccccgtgatattgcaacggaggtaccttcaaactatgttggtttggacttccaaactagagctctgcagcaaagtaaaattgatatttcttgggatgaggatgaaccagggcgaaggaccttgaaacgaaaattcactgctgatcagcttgatgaaatggaaatgaaggagtttttggcttctgatgagagtgaaagtgatgaggccgaggatgaggctgcagatgatgcagaggataagcctgataaaaagagtaagaaaagagatatgtaccgtgctttaatccagtctggagatggggatggttcagatgaggatggtgaagaggatggccaggatatggaggtcaccttcaatactggcttggaggatttaagcaagcgcattcttgaaaagaaggatagggaatcagaaacagtttgggatgcctatctcagaaaaagacgtgagaaaaagaaggcgaagagaaacaggtctaatgattcatcagaggatgagagtagtgattctgatcaagaagcaaaagaagagccagatgatttcttcattgaagaaccttcagttaaaaagagtaaaaaggagtctcggagtaaaagtaacaaagaagaaaagcagcgccaagatatggaaaaggaagcagaagcaagtagaaatgagcttgagttattacttgctgatgacaagggagcagataaaggtgtaaagggatacaatttgaaacgtaaaaaggcaaagggaaagaagggtaaggaagttccggaggagaacaatataccaactgctgatttggaagatccacgctttgctgtcatgttcacctcacccctctttgctctggatccaacagatccgcaattcaaaaggagtgcaacatatgcccggcaggcagcactgagacaacagaagggtgacccagaggaagtgcaagaaagggaagtaaaagtacaatccgagggtttctcgtcaaagatagagaaatcttcattaatcaaatcaattaaagatgaaagccaagcccttcgaaaggaaggaggaaattttgctattccaaggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC153

Protein Analysis

691

Amino Acids

79.61

Weight (kDa)

4.6

Isoelectric Point (pI)

62.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01160
fragaria_vesca	FvH4_1g11200 FvH4_1g11200 FvH4_1g11200 FvH4_1g11200 FvH4_1g11200
malus_domestica	MD02G1124600.v1.1 MD15G1238700.v1.1
prunus_persica	Prupe.7G173800_v2.0.a1
pyrus_communis	pycom02g09730 pycom15g21210
rosa_chinensis	RchiOBHm_Chr2g0098611
rosa_laevigata	RLG00000016812
rosa_multiflora	Rmu_sc0002776.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143850
rosa_rugosa	Rorug02G0073700
rosa_samantha	Rh2AG121300 Rh2BG124900 Rh2CG125900 Rh2DG127000
rosa_wichuraiana	Rw0G004120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1042
AccB1I	GGYRCC	1 cut(s)	1042
AccB7I	CCANNNNNTGG	2 cut(s)	1360, 1645
AccII	CGCG	3 cut(s)	64, 91, 201
AccIII	TCCGGA	1 cut(s)	1777
AciI	CCGC	7 cut(s)	62, 89, 91, 139, 166, 201, 1871
AclWI	GGATC	6 cut(s)	53, 155, 1808, 1853, 1862, 1866
AcoI	YGGCCR	2 cut(s)	468, 1351
AcsI	RAATTY	4 cut(s)	729, 753, 1151, 2056
AcuI	CTGAAG	1 cut(s)	1563
AdeI	CACNNNGTG	1 cut(s)	1025
AfaI	GTAC	5 cut(s)	284, 881, 1044, 1292, 1965
AfiI	CCNNNNNNNGG	8 cut(s)	81, 145, 232, 274, 686, 1360, 1645, 2044
AjiI	CACGTC	1 cut(s)	1466
AjnI	CCWGG	3 cut(s)	621, 1126, 1353
AjuI	GAANNNNNNNTTGG	4 cut(s)	356, 388, 1178, 1210
AloI	GAACNNNNNNTCC	2 cut(s)	77, 109
AluBI	AGCT	5 cut(s)	208, 835, 1082, 1168, 1678
AluI	AGCT	5 cut(s)	208, 835, 1082, 1168, 1678
Alw21I	GWGCWC	1 cut(s)	1084
Alw26I	GTCTC	3 cut(s)	479, 1608, 1909
AlwI	GGATC	6 cut(s)	53, 155, 1808, 1853, 1862, 1866
Ama87I	CYCGRG	1 cut(s)	226
Aor13HI	TCCGGA	1 cut(s)	1777
AoxI	GGCC	6 cut(s)	117, 147, 219, 468, 1224, 1351
ApeKI	GCWGC	5 cut(s)	238, 1087, 1238, 1633, 1907
ApoI	RAATTY	4 cut(s)	729, 753, 1151, 2056
AseI	ATTAAT	2 cut(s)	840, 2006
Asp700I	GAANNNNTTC	1 cut(s)	753
Asp718I	GGTACC	1 cut(s)	1042
AspLEI	GCGC	5 cut(s)	201, 238, 243, 1404, 1638
AspS9I	GGNCC	4 cut(s)	85, 265, 761, 1137
AsuC2I	CCSGG	3 cut(s)	227, 228, 1900
AsuII	TTCGAA	1 cut(s)	2041
AvaI	CYCGRG	1 cut(s)	226
AvaII	GGWCC	4 cut(s)	85, 265, 761, 1137
BaeI	ACNNNNGTAYC	2 cut(s)	1026, 1059
BalI	TGGCCA	2 cut(s)	470, 1353
BamHI	GGATCC	1 cut(s)	1858
BanI	GGYRCC	1 cut(s)	1042
BanII	GRGCYC	1 cut(s)	1084
BarI	GAAGNNNNNNTAC	2 cut(s)	1947, 1979
BbsI	GAAGAC	1 cut(s)	324
Bbv12I	GWGCWC	1 cut(s)	1084
BbvCI	CCTCAGC	1 cut(s)	875
BbvI	GCAGC	5 cut(s)	225, 1099, 1225, 1645, 1919
BccI	CCATC	6 cut(s)	724, 938, 1310, 1316, 1331, 1343
BciT130I	CCWGG	3 cut(s)	623, 1128, 1355
BciVI	GTATCC	3 cut(s)	493, 723, 1721
BclI	TGATCA	2 cut(s)	1162, 1531
BcnI	CCSGG	3 cut(s)	227, 228, 1900
BcoDI	GTCTC	3 cut(s)	479, 1608, 1909
BfaI	CTAG	1 cut(s)	1077
BfmI	CTRYAG	3 cut(s)	891, 1085, 1239
BfoI	RGCGCY	2 cut(s)	239, 1639
BfuI	GTATCC	3 cut(s)	493, 723, 1721
BglI	GCCNNNNNGGC	1 cut(s)	1904
BisI	GCNGC	6 cut(s)	202, 239, 1088, 1239, 1634, 1908
BlsI	GCNGC	6 cut(s)	203, 240, 1089, 1240, 1635, 1909
Bme1390I	CCNGG	6 cut(s)	227, 228, 623, 1128, 1355, 1900
Bme18I	GGWCC	4 cut(s)	85, 265, 761, 1137
BmeT110I	CYCGRG	1 cut(s)	226
BmgBI	CACGTC	1 cut(s)	1466
BmgT120I	GGNCC	4 cut(s)	85, 265, 761, 1137
BmiI	GGNNCC	5 cut(s)	86, 87, 186, 1044, 1860
BmrFI	CCNGG	6 cut(s)	227, 228, 623, 1128, 1355, 1900
BmrI	ACTGGG	1 cut(s)	91
BmsI	GCATC	3 cut(s)	1024, 1237, 1435
BmuI	ACTGGG	1 cut(s)	91
BpiI	GAAGAC	1 cut(s)	324
BplI	GAGNNNNNCTC	2 cut(s)	1964, 1996
BpmI	CTGGAG	1 cut(s)	1332
Bpu10I	CCTNAGC	1 cut(s)	875
Bpu14I	TTCGAA	1 cut(s)	2041
BpuEI	CTTGAG	2 cut(s)	194, 1700
BpuMI	CCSGG	3 cut(s)	227, 228, 1900
BsaBI	GATNNNNATC	2 cut(s)	1449, 1530
BsaJI	CCNNGG	8 cut(s)	89, 120, 180, 226, 1127, 1227, 1971, 2069
BsaWI	WCCGGW	1 cut(s)	1777
BsaXI	ACNNNNNCTCC	4 cut(s)	266, 296, 1600, 1630
Bsc4I	CCNNNNNNNGG	8 cut(s)	81, 145, 232, 274, 686, 1360, 1645, 2044
Bse118I	RCCGGY	2 cut(s)	556, 870
Bse1I	ACTGG	3 cut(s)	86, 1306, 1384
Bse3DI	GCAATG	1 cut(s)	567
Bse8I	GATNNNNATC	2 cut(s)	1449, 1530
BseAI	TCCGGA	1 cut(s)	1777
BseBI	CCWGG	3 cut(s)	623, 1128, 1355
BseDI	CCNNGG	8 cut(s)	89, 120, 180, 226, 1127, 1227, 1971, 2069
BseJI	GATNNNNATC	2 cut(s)	1449, 1530
BseLI	CCNNNNNNNGG	8 cut(s)	81, 145, 232, 274, 686, 1360, 1645, 2044
BseMI	GCAATG	1 cut(s)	567
BseMII	CTCAG	3 cut(s)	866, 1468, 1904
BseNI	ACTGG	3 cut(s)	86, 1306, 1384
BseRI	GAGGAG	8 cut(s)	287, 395, 398, 413, 443, 446, 470, 1796
BseXI	GCAGC	5 cut(s)	225, 1099, 1225, 1645, 1919
Bsh1236I	CGCG	3 cut(s)	64, 91, 201
Bsh1285I	CGRYCG	1 cut(s)	139
BshFI	GGCC	6 cut(s)	119, 149, 221, 470, 1226, 1353
BshNI	GGYRCC	1 cut(s)	1042
BsiEI	CGRYCG	1 cut(s)	139
BsiHKAI	GWGCWC	1 cut(s)	1084
BsiHKCI	CYCGRG	1 cut(s)	226
BsiSI	CCGG	5 cut(s)	227, 557, 871, 1778, 1900
BslFI	GGGAC	2 cut(s)	98, 520
BslI	CCNNNNNNNGG	8 cut(s)	81, 145, 232, 274, 686, 1360, 1645, 2044
BsmAI	GTCTC	3 cut(s)	479, 1608, 1909
BsmBI	CGTCTC	1 cut(s)	479
BsmFI	GGGAC	2 cut(s)	98, 520
BsmI	GAATGC	1 cut(s)	1404
BsnI	GGCC	6 cut(s)	119, 149, 221, 470, 1226, 1353
BsoBI	CYCGRG	1 cut(s)	226
Bsp119I	TTCGAA	1 cut(s)	2041
Bsp1286I	GDGCHC	1 cut(s)	1084
Bsp13I	TCCGGA	1 cut(s)	1777
Bsp143I	GATC	9 cut(s)	58, 129, 160, 979, 1162, 1531, 1813, 1858, 1867
BspACI	CCGC	7 cut(s)	62, 89, 91, 139, 166, 201, 1871
BspANI	GGCC	6 cut(s)	119, 149, 221, 470, 1226, 1353
BspCNI	CTCAG	3 cut(s)	867, 1467, 1905
BspEI	TCCGGA	1 cut(s)	1777
BspFNI	CGCG	3 cut(s)	64, 91, 201
BspLI	GGNNCC	5 cut(s)	86, 87, 186, 1044, 1860
BspMAI	CTGCAG	2 cut(s)	1089, 1243
BspPI	GGATC	6 cut(s)	53, 155, 1808, 1853, 1862, 1866
BspQI	GCTCTTC	1 cut(s)	1542
BspT104I	TTCGAA	1 cut(s)	2041
BspT107I	GGYRCC	1 cut(s)	1042
BsrDI	GCAATG	1 cut(s)	567
BsrFI	RCCGGY	2 cut(s)	556, 870
BsrI	ACTGG	3 cut(s)	86, 1306, 1384
BssAI	RCCGGY	2 cut(s)	556, 870
BssECI	CCNNGG	8 cut(s)	89, 120, 180, 226, 1127, 1227, 1971, 2069
BssMI	GATC	9 cut(s)	58, 129, 160, 979, 1162, 1531, 1813, 1858, 1867
BssT1I	CCWWGG	2 cut(s)	120, 2069
Bst2UI	CCWGG	3 cut(s)	623, 1128, 1355
Bst4CI	ACNGT	3 cut(s)	551, 1295, 1438
Bst6I	CTCTTC	7 cut(s)	330, 372, 402, 420, 1338, 1478, 1542
BstAPI	GCANNNNNTGC	2 cut(s)	1247, 1895
BstBI	TTCGAA	1 cut(s)	2041
BstC8I	GCNNGC	7 cut(s)	206, 558, 609, 855, 872, 1400, 1905
BstDEI	CTNAG	4 cut(s)	875, 983, 1454, 1913
BstDSI	CCRYGG	1 cut(s)	89
BstEII	GGTNACC	2 cut(s)	1366, 1928
BstENI	CCTNNNNNAGG	1 cut(s)	2042
BstFNI	CGCG	3 cut(s)	64, 91, 201
BstH2I	RGCGCY	2 cut(s)	239, 1639
BstHHI	GCGC	5 cut(s)	201, 238, 243, 1404, 1638
BstKTI	GATC	9 cut(s)	61, 132, 163, 982, 1165, 1534, 1816, 1861, 1870
BstMAI	GTCTC	3 cut(s)	479, 1608, 1909
BstMBI	GATC	9 cut(s)	58, 129, 160, 979, 1162, 1531, 1813, 1858, 1867
BstMCI	CGRYCG	1 cut(s)	139
BstMWI	GCNNNNNNNGC	5 cut(s)	205, 562, 1247, 1895, 1904
BstNI	CCWGG	3 cut(s)	623, 1128, 1355
BstPI	GGTNACC	2 cut(s)	1366, 1928
BstSCI	CCNGG	6 cut(s)	225, 226, 621, 1126, 1353, 1898
BstSFI	CTRYAG	3 cut(s)	891, 1085, 1239
BstUI	CGCG	3 cut(s)	64, 91, 201
BstV1I	GCAGC	5 cut(s)	225, 1099, 1225, 1645, 1919
BstV2I	GAAGAC	1 cut(s)	324
BstX2I	RGATCY	3 cut(s)	1813, 1858, 1867
BstYI	RGATCY	3 cut(s)	1813, 1858, 1867
BsuI	GTATCC	3 cut(s)	493, 723, 1721
BsuRI	GGCC	6 cut(s)	119, 149, 221, 470, 1226, 1353
BtgI	CCRYGG	1 cut(s)	89
BtrI	CACGTC	1 cut(s)	1466
BtsI	GCAGTG	1 cut(s)	1155
BtsIMutI	CAGTG	3 cut(s)	79, 1155, 1910
Cac8I	GCNNGC	7 cut(s)	206, 558, 609, 855, 872, 1400, 1905
CfoI	GCGC	5 cut(s)	201, 238, 243, 1404, 1638
Cfr10I	RCCGGY	2 cut(s)	556, 870
Cfr13I	GGNCC	4 cut(s)	85, 265, 761, 1137
Cfr42I	CCGCGG	1 cut(s)	92
Cfr9I	CCCGGG	1 cut(s)	226
Csp6I	GTAC	5 cut(s)	283, 880, 1043, 1291, 1964
CviAII	CATG	3 cut(s)	151, 758, 1831
CviQI	GTAC	5 cut(s)	283, 880, 1043, 1291, 1964
DdeI	CTNAG	4 cut(s)	875, 983, 1454, 1913
DpnI	GATC	9 cut(s)	60, 131, 162, 981, 1164, 1533, 1815, 1860, 1869
DpnII	GATC	9 cut(s)	58, 129, 160, 979, 1162, 1531, 1813, 1858, 1867
DraIII	CACNNNGTG	1 cut(s)	1025
EaeI	YGGCCR	2 cut(s)	468, 1351
Eam1104I	CTCTTC	7 cut(s)	330, 372, 402, 420, 1338, 1478, 1542
EarI	CTCTTC	7 cut(s)	330, 372, 402, 420, 1338, 1478, 1542
Ecl136II	GAGCTC	1 cut(s)	1082
Eco130I	CCWWGG	2 cut(s)	120, 2069
Eco24I	GRGCYC	1 cut(s)	1084
Eco47I	GGWCC	4 cut(s)	85, 265, 761, 1137
Eco53kI	GAGCTC	1 cut(s)	1082
Eco57I	CTGAAG	1 cut(s)	1563
Eco88I	CYCGRG	1 cut(s)	226
Eco91I	GGTNACC	2 cut(s)	1366, 1928
EcoICRI	GAGCTC	1 cut(s)	1082
EcoNI	CCTNNNNNAGG	1 cut(s)	2042
EcoO109I	RGGNCCY	2 cut(s)	85, 1137
EcoO65I	GGTNACC	2 cut(s)	1366, 1928
EcoRI	GAATTC	1 cut(s)	729
EcoRII	CCWGG	3 cut(s)	621, 1126, 1353
EcoT14I	CCWWGG	2 cut(s)	120, 2069
EcoT38I	GRGCYC	1 cut(s)	1084
ErhI	CCWWGG	2 cut(s)	120, 2069
Esp3I	CGTCTC	1 cut(s)	479
FaeI	CATG	3 cut(s)	154, 761, 1834
FaqI	GGGAC	2 cut(s)	98, 520
FatI	CATG	3 cut(s)	150, 757, 1830
FauI	CCCGC	2 cut(s)	96, 173
FauNDI	CATATG	1 cut(s)	1894
FbaI	TGATCA	2 cut(s)	1162, 1531
Fnu4HI	GCNGC	6 cut(s)	202, 239, 1088, 1239, 1634, 1908
FriOI	GRGCYC	1 cut(s)	1084
Fsp4HI	GCNGC	6 cut(s)	202, 239, 1088, 1239, 1634, 1908
FspBI	CTAG	1 cut(s)	1077
GlaI	GCGC	5 cut(s)	200, 237, 242, 1403, 1637
GluI	GCNGC	6 cut(s)	202, 239, 1088, 1239, 1634, 1908
GsuI	CTGGAG	1 cut(s)	1332
HaeII	RGCGCY	2 cut(s)	239, 1639
HaeIII	GGCC	6 cut(s)	119, 149, 221, 470, 1226, 1353
HapII	CCGG	5 cut(s)	227, 557, 871, 1778, 1900
HhaI	GCGC	5 cut(s)	201, 238, 243, 1404, 1638
Hin1II	CATG	3 cut(s)	154, 761, 1834
Hin6I	GCGC	5 cut(s)	199, 236, 241, 1402, 1636
HinP1I	GCGC	5 cut(s)	199, 236, 241, 1402, 1636
HincII	GTYRAC	2 cut(s)	619, 649
HindII	GTYRAC	2 cut(s)	619, 649
HpaI	GTTAAC	1 cut(s)	619
HpaII	CCGG	5 cut(s)	227, 557, 871, 1778, 1900
Hpy166II	GTNNAC	5 cut(s)	79, 156, 619, 649, 1836
Hpy188III	TCNNGA	9 cut(s)	127, 211, 422, 977, 1311, 1409, 1535, 1778, 1856
Hpy8I	GTNNAC	5 cut(s)	79, 156, 619, 649, 1836
Hpy99I	CGWCG	5 cut(s)	137, 335, 493, 496, 499
HpyCH4III	ACNGT	3 cut(s)	551, 1295, 1438
HpyCH4IV	ACGT	2 cut(s)	1465, 1741
HpyCH4V	TGCA	7 cut(s)	565, 1034, 1087, 1241, 1250, 1889, 1945
HpyF10VI	GCNNNNNNNGC	5 cut(s)	205, 562, 1247, 1895, 1904
HpyF3I	CTNAG	4 cut(s)	875, 983, 1454, 1913
HpySE526I	ACGT	2 cut(s)	1465, 1741
Hsp92II	CATG	3 cut(s)	154, 761, 1834
HspAI	GCGC	5 cut(s)	199, 236, 241, 1402, 1636
KflI	GGGWCCC	1 cut(s)	85
Kpn2I	TCCGGA	1 cut(s)	1777
KpnI	GGTACC	1 cut(s)	1046
KroI	GCCGGC	2 cut(s)	556, 870
KroNI	GCCGGC	2 cut(s)	558, 872
Ksp22I	TGATCA	2 cut(s)	1162, 1531
KspAI	GTTAAC	1 cut(s)	619
KspI	CCGCGG	1 cut(s)	92
Kzo9I	GATC	9 cut(s)	58, 129, 160, 979, 1162, 1531, 1813, 1858, 1867
LguI	GCTCTTC	1 cut(s)	1542
LmnI	GCTCC	3 cut(s)	109, 190, 1706
Lsp1109I	GCAGC	5 cut(s)	225, 1099, 1225, 1645, 1919
LweI	GCATC	3 cut(s)	1024, 1237, 1435
MaeI	CTAG	1 cut(s)	1077
MaeII	ACGT	2 cut(s)	1465, 1741
MaeIII	GTNAC	4 cut(s)	902, 1366, 1616, 1928
MalI	GATC	9 cut(s)	60, 131, 162, 981, 1164, 1533, 1815, 1860, 1869
MboI	GATC	9 cut(s)	58, 129, 160, 979, 1162, 1531, 1813, 1858, 1867
MfeI	CAATTG	1 cut(s)	909
MflI	RGATCY	3 cut(s)	1813, 1858, 1867
MhlI	GDGCHC	1 cut(s)	1084
MlsI	TGGCCA	2 cut(s)	470, 1353
MluNI	TGGCCA	2 cut(s)	470, 1353
MlyI	GAGTC	2 cut(s)	899, 1610
MmeI	TCCRAC	1 cut(s)	1886
Mox20I	TGGCCA	2 cut(s)	470, 1353
MroI	TCCGGA	1 cut(s)	1777
MroNI	GCCGGC	2 cut(s)	556, 870
MroXI	GAANNNNTTC	1 cut(s)	753
MscI	TGGCCA	2 cut(s)	470, 1353
MseI	TTAA	9 cut(s)	618, 639, 840, 1011, 1301, 1394, 1584, 2006, 2019
Msp20I	TGGCCA	2 cut(s)	470, 1353
MspA1I	CMGCKG	1 cut(s)	91
MspI	CCGG	5 cut(s)	227, 557, 871, 1778, 1900
MspR9I	CCNGG	6 cut(s)	227, 228, 623, 1128, 1355, 1900
MteI	GCGCNGCGC	1 cut(s)	239
MunI	CAATTG	1 cut(s)	909
Mva1269I	GAATGC	1 cut(s)	1404
MvaI	CCWGG	3 cut(s)	623, 1128, 1355
MvnI	CGCG	3 cut(s)	64, 91, 201
MwoI	GCNNNNNNNGC	5 cut(s)	205, 562, 1247, 1895, 1904
NaeI	GCCGGC	2 cut(s)	558, 872
NciI	CCSGG	3 cut(s)	227, 228, 1900
NdeI	CATATG	1 cut(s)	1894
NdeII	GATC	9 cut(s)	58, 129, 160, 979, 1162, 1531, 1813, 1858, 1867
NgoMIV	GCCGGC	2 cut(s)	556, 870
NlaIII	CATG	3 cut(s)	154, 761, 1834
NlaIV	GGNNCC	5 cut(s)	86, 87, 186, 1044, 1860
NmeAIII	GCCGAG	2 cut(s)	161, 1252
NmuCI	GTSAC	3 cut(s)	902, 1366, 1928
NspV	TTCGAA	1 cut(s)	2041
PciSI	GCTCTTC	1 cut(s)	1542
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 327, 488
PctI	GAATGC	1 cut(s)	1404
PdiI	GCCGGC	2 cut(s)	558, 872
PdmI	GAANNNNTTC	1 cut(s)	753
PfeI	GAWTC	8 cut(s)	66, 418, 479, 987, 998, 1427, 1502, 1526
PflMI	CCANNNNNTGG	2 cut(s)	1360, 1645
PkrI	GCNGC	6 cut(s)	203, 240, 1089, 1240, 1635, 1909
PleI	GAGTC	2 cut(s)	899, 1609
PpsI	GAGTC	2 cut(s)	899, 1609
PpuMI	RGGWCCY	2 cut(s)	85, 1137
PshBI	ATTAAT	2 cut(s)	840, 2006
Psp124BI	GAGCTC	1 cut(s)	1084
Psp5II	RGGWCCY	2 cut(s)	85, 1137
Psp6I	CCWGG	3 cut(s)	621, 1126, 1353
PspEI	GGTNACC	2 cut(s)	1366, 1928
PspGI	CCWGG	3 cut(s)	621, 1126, 1353
PspN4I	GGNNCC	5 cut(s)	86, 87, 186, 1044, 1860
PspPI	GGNCC	4 cut(s)	85, 265, 761, 1137
PspPPI	RGGWCCY	2 cut(s)	85, 1137
PstI	CTGCAG	2 cut(s)	1089, 1243
PsuI	RGATCY	3 cut(s)	1813, 1858, 1867
RsaI	GTAC	5 cut(s)	284, 881, 1044, 1292, 1965
RsaNI	GTAC	5 cut(s)	283, 880, 1043, 1291, 1964
SacI	GAGCTC	1 cut(s)	1084
SacII	CCGCGG	1 cut(s)	92
SapI	GCTCTTC	1 cut(s)	1542
SaqAI	TTAA	9 cut(s)	618, 639, 840, 1011, 1301, 1394, 1584, 2006, 2019
SatI	GCNGC	6 cut(s)	202, 239, 1088, 1239, 1634, 1908
Sau3AI	GATC	9 cut(s)	58, 129, 160, 979, 1162, 1531, 1813, 1858, 1867
Sau96I	GGNCC	4 cut(s)	85, 265, 761, 1137
SchI	GAGTC	2 cut(s)	899, 1610
ScrFI	CCNGG	6 cut(s)	227, 228, 623, 1128, 1355, 1900
SduI	GDGCHC	1 cut(s)	1084
SfaNI	GCATC	3 cut(s)	1024, 1237, 1435
SfcI	CTRYAG	3 cut(s)	891, 1085, 1239
Sfr303I	CCGCGG	1 cut(s)	92
SfuI	TTCGAA	1 cut(s)	2041
SgrBI	CCGCGG	1 cut(s)	92
SinI	GGWCC	4 cut(s)	85, 265, 761, 1137
SmaI	CCCGGG	1 cut(s)	228
SmlI	CTYRAG	2 cut(s)	209, 1679
SmoI	CTYRAG	2 cut(s)	209, 1679
SsiI	CCGC	7 cut(s)	62, 89, 91, 139, 166, 201, 1871
SspMI	CTAG	1 cut(s)	1077
SstI	GAGCTC	1 cut(s)	1084
StyD4I	CCNGG	6 cut(s)	225, 226, 621, 1126, 1353, 1898
StyI	CCWWGG	2 cut(s)	120, 2069
TaaI	ACNGT	3 cut(s)	551, 1295, 1438
TaiI	ACGT	2 cut(s)	1468, 1744
TaqI	TCGA	4 cut(s)	8, 126, 132, 2041
TatI	WGTACW	1 cut(s)	1963
TauI	GCSGC	1 cut(s)	204
TfiI	GAWTC	8 cut(s)	66, 418, 479, 987, 998, 1427, 1502, 1526
Tru1I	TTAA	9 cut(s)	618, 639, 840, 1011, 1301, 1394, 1584, 2006, 2019
Tru9I	TTAA	9 cut(s)	618, 639, 840, 1011, 1301, 1394, 1584, 2006, 2019
TscAI	CASTG	3 cut(s)	86, 1162, 1917
TseFI	GTSAC	3 cut(s)	902, 1366, 1928
TseI	GCWGC	5 cut(s)	238, 1087, 1238, 1633, 1907
Tsp45I	GTSAC	3 cut(s)	902, 1366, 1928
TspGWI	ACGGA	5 cut(s)	64, 177, 512, 524, 1052
TspMI	CCCGGG	1 cut(s)	226
TspRI	CASTG	3 cut(s)	86, 1162, 1917
Van91I	CCANNNNNTGG	2 cut(s)	1360, 1645
VpaK11BI	GGWCC	4 cut(s)	85, 265, 761, 1137
VspI	ATTAAT	2 cut(s)	840, 2006
XagI	CCTNNNNNAGG	1 cut(s)	2042
XapI	RAATTY	4 cut(s)	729, 753, 1151, 2056
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1313
XmaI	CCCGGG	1 cut(s)	226
XmnI	GAANNNNTTC	1 cut(s)	753
XspI	CTAG	1 cut(s)	1077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.