FvH4_1g12400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0011838
Physical Location & Seq
Forward (+)
6797896 .. 6803480
5585 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g12400.t1

Sequence Viewer

Length: 2085 bp
ATGAGGAAGCGAGATTTGGCGATTCTCATGCTCTCTGCTTTCGCTATCTTCTTCTCTCTTCAGCACGAAGGCGACTTCTCCTTCCGTGAGGCATGGATGCACCTCTCCGACGACTACCCCATCAAGTACGAAGCCGAGCGCCTCCCGCCGCCGATCGTCGCCGATCTTAACGGCGACGGCAAGAAGGAAGTCCTCGTCGCCACTCACGACGCCAAAATCCAGATTTTGGAGCCTCATAGTCGGCGCGTGGATGAAGGATTCAGTAGCGCGCGTGTTCTGGCTGAGGTCAGCCTTTTGCCGGATAAAATCCGAATCTCCTCCGGCAGACGCGCGGTGGCGATGGCTACCGGAGTTATAGAGAAAGTGAGGCCCGGGCAGAGAGCCAGGCAGGTTTTGGTGGTTGTTACGTCCGGCTGGTCTGTAATGTGCTTTGATTCCAATCTCAAGAGGCTGTGGGATGTTAATTTGCAGGAGGATTTTCCGCATAATGCTCACCATAGGGAGATTGCGATTTCGATAACCAATTACACTCTGAAGCATGGGGATTCTGGGTTGGTGATTGTTGGCGGAAGGATGGAAATGCAGCCTCATATTACCTTGGATCCTTTTGAAGAAATTGGGATGGCAGAGAGAAGTGCTGAGCAGCATAGAAGAAATCTAACTGAAAAGGAGGCATCTGAAAATTCTGAAACTGTGGATTTACGCCATTTTGCACTATATGCATTTGCCGGTGGTTCTGGAAAAATTAGATGGACTAGAAAAAATGAGAATATTGAAGCACATGCTTCAGATGCATCACAGTTGATTCCCCAGCACAATTACAAACTTGATGTTCAGGCTTTGAACAGTCGTCAACCAGGAGAATTTGCATGTAGGGAATTCAGAGAATCAATCCTTGGAGTTATGCCGCATCATTGGGATAGAAGAGAAGATACTATGTTGAAACTTGCACACTTCAGGAGGCACAAAAGGAAAACATTGAAGAAAACAGCAGGAAAGAATACAAACTACCCTTTCCATAAGCCTGAAGAAAATAATCCTCCTGGAAAGGACTCGTCAAAAAAGATTTCCAACTTAATTGGAAAAGCTGCCCAATATGCTGGTTCAGTGAAATCCAAGAAGCCATATCAATATATCCCGACCATCACAAATCACACTCAACTTTGGTGGGTCCCTAACGTGGTTGTCGCTCATCAAAAAGAAGGGATAGAAGCTGTTCACATAGCGTCTGGTCGCACTCTTTGTAAGCTTAATCTTCAAGAGGCTGGTCTTCATGCAGATGTAAATGGTGATGGTGTCCTAGATCATGTCCAGGCTGTTGGCGGAAATGGCGCTGAACAGACTGTTGTTAGTGGATCCATGGAAGTGCTCCGTCCTTGTTGGGCCGTTGCAACCTCCGGTGTACCTGTACGAGAGCAACTATTTAATGCTTCTATATGTCATCATTCAGTTTTTAACTTATTCCAACATGGAGATTATTCTAGAAGCTATGGTCGAGCTCCTGATTTGGCTTCATTGGAAGTAGCAACACCTATTCTCATCCCAAGGAATGATGGCCACAGGCACCGAAAGGGAAGCCATGGTGATGTTGTCTTTTTGACAAATCGTGGTGAGGTAACATCCTACTCACCCGGCTTGCACGGTCACGGTGCTGTTTGGAATTGGCATCTGTTAACGGGTGCTACATGGTCAAATCTTCCATCTCCAGCGGGGATGATGGAAGCTGCTGTAGTGGTCCCTACACTGAAGGCATTCTCCTTGCGTGTCCATGACAATCAGGAAGTGATCCTTGCGGCTGGAGACCAAGAGGCTATCGTGATATCGCCTGGGGGAAGTATTTTAACCTCCCTTGAGCTTCCAGCATCACCTACCCATGCCTTGATTGCTGAGGACTTCTCAAATGACGGGCTCACCGACCTCATTCTTGTGACCTCAACTGGGGTGTATGGGTTTGTCCAAACCAGGCAACCAGGAGCCCTCTTCTTCAGCATACTAGTTGGTGTCCTCATACTTGTGATGGGAGTCATATTTGTCACCCAACACCTGAACTCCATAAAGGGCAAACCTCGTCCATCTGGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

695

Amino Acids

76.8

Weight (kDa)

8.41

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011838)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51050
fragaria_vesca FvH4_1g12400 FvH4_1g12400
malus_domestica MD02G1137100.v1.1 MD15G1250800.v1.1
prunus_persica Prupe.7G163500_v2.0.a1 Prupe.7G163500_v2.0.a1
pyrus_communis pycom02g10850 pycom15g22120
rosa_chinensis RchiOBHm_Chr2g0100261
rosa_laevigata RLG00000016950
rosa_multiflora Rmu_sc0002547.1_g000015
rosa_roxburghii Rroxscaffold_2G00142440
rosa_rugosa Rorug02G0086900
rosa_samantha Rh2AG135900 Rh2BG139400 Rh2CG141200 Rh2DG141400
rosa_wichuraiana Rw2G010630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 379
AccB1I GGYRCC 1 cut(s) 1563
AccB7I CCANNNNNTGG 1 cut(s) 226
AccII CGCG 5 cut(s) 246, 269, 271, 330, 332
AciI CCGC 9 cut(s) 146, 149, 332, 482, 567, 908, 1323, 1709, 1793
AclWI GGATC 5 cut(s) 596, 609, 1350, 1363, 1780
AcoI YGGCCR 1 cut(s) 1555
AcsI RAATTY 3 cut(s) 682, 863, 878
AcuI CTGAAG 7 cut(s) 44, 554, 771, 940, 1047, 1766, 1969
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 3 cut(s) 128, 1404, 1410
AfiI CCNNNNNNNGG 4 cut(s) 226, 298, 1180, 1938
AgsI TTSAA 6 cut(s) 611, 776, 844, 943, 982, 1259
AhlI ACTAGT 1 cut(s) 1993
AjnI CCWGG 7 cut(s) 383, 856, 1042, 1311, 1825, 1961, 1969
AjuI GAANNNNNNNTTGG 3 cut(s) 31, 879, 911
AluBI AGCT 7 cut(s) 1088, 1214, 1249, 1488, 1499, 1724, 1855
AluI AGCT 7 cut(s) 1088, 1214, 1249, 1488, 1499, 1724, 1855
Alw21I GWGCWC 2 cut(s) 1371, 1501
Alw26I GTCTC 1 cut(s) 1794
AlwI GGATC 5 cut(s) 596, 609, 1350, 1363, 1780
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 3 cut(s) 368, 1383, 1555
ApeKI GCWGC 4 cut(s) 583, 643, 1088, 1724
ApoI RAATTY 3 cut(s) 682, 863, 878
Asp700I GAANNNNTTC 2 cut(s) 1215, 1751
AspLEI GCGC 6 cut(s) 141, 246, 269, 271, 332, 1334
AspS9I GGNCC 4 cut(s) 369, 1171, 1383, 1735
AsuC2I CCSGG 3 cut(s) 372, 373, 1632
AsuHPI GGTGA 9 cut(s) 485, 568, 1301, 1595, 1620, 1622, 1857, 1903, 2026
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 2 cut(s) 1171, 1735
BalI TGGCCA 1 cut(s) 1557
BamHI GGATCC 2 cut(s) 601, 1355
BanI GGYRCC 1 cut(s) 1563
BanII GRGCYC 3 cut(s) 1501, 1911, 1978
BarI GAAGNNNNNNTAC 2 cut(s) 916, 948
BbsI GAAGAC 1 cut(s) 1262
Bbv12I GWGCWC 2 cut(s) 1371, 1501
BbvCI CCTCAGC 2 cut(s) 282, 1887
BbvI GCAGC 4 cut(s) 595, 655, 1075, 1711
BceAI ACGGC 3 cut(s) 187, 193, 1370
BcgI CGANNNNNNTGC 2 cut(s) 10, 44
BciT130I CCWGG 7 cut(s) 385, 858, 1044, 1313, 1827, 1963, 1971
BcnI CCSGG 3 cut(s) 372, 373, 1632
BcoDI GTCTC 1 cut(s) 1794
BcuI ACTAGT 1 cut(s) 1993
BfaI CTAG 4 cut(s) 756, 1301, 1482, 1994
BfmI CTRYAG 1 cut(s) 1728
BfoI RGCGCY 2 cut(s) 142, 1335
BfuAI ACCTGC 1 cut(s) 379
BisI GCNGC 7 cut(s) 149, 584, 644, 908, 1089, 1725, 1794
BlpI GCTNAGC 1 cut(s) 639
BlsI GCNGC 7 cut(s) 150, 585, 645, 909, 1090, 1726, 1795
Bme18I GGWCC 2 cut(s) 1171, 1735
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 4 cut(s) 369, 1171, 1383, 1735
BmiI GGNNCC 8 cut(s) 231, 603, 1172, 1173, 1357, 1565, 1737, 1975
BmrI ACTGGG 1 cut(s) 1947
BmsI GCATC 7 cut(s) 87, 683, 781, 803, 919, 1675, 1871
BmuI ACTGGG 1 cut(s) 1947
BpiI GAAGAC 1 cut(s) 1262
BplI GAGNNNNNCTC 2 cut(s) 1880, 1912
BpmI CTGGAG 2 cut(s) 1689, 1818
Bpu10I CCTNAGC 2 cut(s) 282, 1887
Bpu1102I GCTNAGC 1 cut(s) 639
BpuEI CTTGAG 2 cut(s) 428, 1871
BpuMI CCSGG 3 cut(s) 372, 373, 1632
BsaBI GATNNNNATC 1 cut(s) 438
BsaHI GRCGYC 1 cut(s) 210
BsaI GGTCTC 1 cut(s) 1794
BsaJI CCNNGG 7 cut(s) 371, 597, 895, 1359, 1544, 1579, 1826
BsaWI WCCGGW 2 cut(s) 347, 1397
BsaXI ACNNNNNCTCC 2 cut(s) 2033, 2063
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 298, 1180, 1938
Bse118I RCCGGY 1 cut(s) 728
Bse1I ACTGG 1 cut(s) 1942
Bse8I GATNNNNATC 1 cut(s) 438
BseBI CCWGG 7 cut(s) 385, 858, 1044, 1313, 1827, 1963, 1971
BseDI CCNNGG 7 cut(s) 371, 597, 895, 1359, 1544, 1579, 1826
BseGI GGATG 8 cut(s) 102, 256, 463, 579, 627, 1539, 1619, 1719
BseJI GATNNNNATC 1 cut(s) 438
BseLI CCNNNNNNNGG 4 cut(s) 226, 298, 1180, 1938
BseMII CTCAG 3 cut(s) 273, 630, 1878
BseNI ACTGG 1 cut(s) 1942
BsePI GCGCGC 1 cut(s) 267
BseRI GAGGAG 1 cut(s) 307
BseXI GCAGC 4 cut(s) 595, 655, 1075, 1711
BseYI CCCAGC 1 cut(s) 810
Bsh1236I CGCG 5 cut(s) 246, 269, 271, 330, 332
Bsh1285I CGRYCG 1 cut(s) 156
BshFI GGCC 3 cut(s) 370, 1385, 1557
BshNI GGYRCC 1 cut(s) 1563
BsiEI CGRYCG 1 cut(s) 156
BsiHKAI GWGCWC 2 cut(s) 1371, 1501
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 8 cut(s) 299, 321, 348, 372, 411, 729, 1398, 1632
BslFI GGGAC 2 cut(s) 1157, 1721
BslI CCNNNNNNNGG 4 cut(s) 226, 298, 1180, 1938
BsmAI GTCTC 1 cut(s) 1794
BsmFI GGGAC 2 cut(s) 1157, 1721
BsmI GAATGC 1 cut(s) 1751
BsnI GGCC 3 cut(s) 370, 1385, 1557
Bso31I GGTCTC 1 cut(s) 1794
BsoBI CYCGRG 1 cut(s) 371
Bsp1286I GDGCHC 4 cut(s) 1371, 1501, 1911, 1978
Bsp143I GATC 6 cut(s) 153, 163, 601, 1303, 1355, 1785
Bsp1720I GCTNAGC 1 cut(s) 639
Bsp19I CCATGG 2 cut(s) 1359, 1579
BspACI CCGC 9 cut(s) 146, 149, 332, 482, 567, 908, 1323, 1709, 1793
BspANI GGCC 3 cut(s) 370, 1385, 1557
BspCNI CTCAG 3 cut(s) 274, 631, 1879
BspFNI CGCG 5 cut(s) 246, 269, 271, 330, 332
BspLI GGNNCC 8 cut(s) 231, 603, 1172, 1173, 1357, 1565, 1737, 1975
BspMI ACCTGC 1 cut(s) 379
BspPI GGATC 5 cut(s) 596, 609, 1350, 1363, 1780
BspT107I GGYRCC 1 cut(s) 1563
BspTNI GGTCTC 1 cut(s) 1794
BsrFI RCCGGY 1 cut(s) 728
BsrI ACTGG 1 cut(s) 1942
BssAI RCCGGY 1 cut(s) 728
BssECI CCNNGG 7 cut(s) 371, 597, 895, 1359, 1544, 1579, 1826
BssHII GCGCGC 1 cut(s) 267
BssMI GATC 6 cut(s) 153, 163, 601, 1303, 1355, 1785
BssNI GRCGYC 1 cut(s) 210
BssT1I CCWWGG 5 cut(s) 597, 895, 1359, 1544, 1579
Bst2UI CCWGG 7 cut(s) 385, 858, 1044, 1313, 1827, 1963, 1971
Bst4CI ACNGT 6 cut(s) 694, 801, 848, 1345, 1643, 1649
Bst6I CTCTTC 3 cut(s) 63, 919, 1985
BstACI GRCGYC 1 cut(s) 210
BstAPI GCANNNNNTGC 1 cut(s) 719
BstC8I GCNNGC 2 cut(s) 269, 1637
BstDEI CTNAG 3 cut(s) 282, 639, 1887
BstDSI CCRYGG 2 cut(s) 1359, 1579
BstF5I GGATG 8 cut(s) 102, 256, 463, 579, 627, 1539, 1619, 1719
BstFNI CGCG 5 cut(s) 246, 269, 271, 330, 332
BstH2I RGCGCY 2 cut(s) 142, 1335
BstHHI GCGC 6 cut(s) 141, 246, 269, 271, 332, 1334
BstKTI GATC 6 cut(s) 156, 166, 604, 1306, 1358, 1788
BstMAI GTCTC 1 cut(s) 1794
BstMBI GATC 6 cut(s) 153, 163, 601, 1303, 1355, 1785
BstMCI CGRYCG 1 cut(s) 156
BstMWI GCNNNNNNNGC 6 cut(s) 145, 719, 791, 1097, 1329, 1883
BstNI CCWGG 7 cut(s) 385, 858, 1044, 1313, 1827, 1963, 1971
BstNSI RCATGY 2 cut(s) 785, 873
BstSFI CTRYAG 1 cut(s) 1728
BstUI CGCG 5 cut(s) 246, 269, 271, 330, 332
BstV1I GCAGC 4 cut(s) 595, 655, 1075, 1711
BstV2I GAAGAC 1 cut(s) 1262
BstX2I RGATCY 2 cut(s) 601, 1355
BstXI CCANNNNNNTGG 2 cut(s) 1100, 1319
BstYI RGATCY 2 cut(s) 601, 1355
BsuRI GGCC 3 cut(s) 370, 1385, 1557
BtgI CCRYGG 2 cut(s) 1359, 1579
BtgZI GCGATG 1 cut(s) 353
BtsCI GGATG 8 cut(s) 102, 256, 463, 579, 627, 1539, 1619, 1719
BtsIMutI CAGTG 2 cut(s) 1113, 1742
BveI ACCTGC 1 cut(s) 379
Cac8I GCNNGC 2 cut(s) 269, 1637
CfoI GCGC 6 cut(s) 141, 246, 269, 271, 332, 1334
Cfr10I RCCGGY 1 cut(s) 728
Cfr13I GGNCC 4 cut(s) 369, 1171, 1383, 1735
Cfr9I CCCGGG 1 cut(s) 371
CseI GACGC 3 cut(s) 218, 336, 1215
Csp6I GTAC 3 cut(s) 127, 1403, 1409
CspCI CAANNNNNGTGG 2 cut(s) 1148, 1183
CviQI GTAC 3 cut(s) 127, 1403, 1409
DdeI CTNAG 3 cut(s) 282, 639, 1887
DpnI GATC 6 cut(s) 155, 165, 603, 1305, 1357, 1787
DpnII GATC 6 cut(s) 153, 163, 601, 1303, 1355, 1785
EaeI YGGCCR 1 cut(s) 1555
Eam1104I CTCTTC 3 cut(s) 63, 919, 1985
EarI CTCTTC 3 cut(s) 63, 919, 1985
EciI GGCGGA 2 cut(s) 582, 1338
Ecl136II GAGCTC 1 cut(s) 1499
Eco130I CCWWGG 5 cut(s) 597, 895, 1359, 1544, 1579
Eco24I GRGCYC 3 cut(s) 1501, 1911, 1978
Eco31I GGTCTC 1 cut(s) 1794
Eco32I GATATC 1 cut(s) 1821
Eco47I GGWCC 2 cut(s) 1171, 1735
Eco53kI GAGCTC 1 cut(s) 1499
Eco57I CTGAAG 7 cut(s) 44, 554, 771, 940, 1047, 1766, 1969
Eco88I CYCGRG 1 cut(s) 371
EcoICRI GAGCTC 1 cut(s) 1499
EcoO109I RGGNCCY 1 cut(s) 1171
EcoRI GAATTC 1 cut(s) 878
EcoRII CCWGG 7 cut(s) 383, 856, 1042, 1311, 1825, 1961, 1969
EcoRV GATATC 1 cut(s) 1821
EcoT14I CCWWGG 5 cut(s) 597, 895, 1359, 1544, 1579
EcoT22I ATGCAT 2 cut(s) 724, 796
EcoT38I GRGCYC 3 cut(s) 1501, 1911, 1978
ErhI CCWWGG 5 cut(s) 597, 895, 1359, 1544, 1579
FalI AAGNNNNNCTT 2 cut(s) 1773, 1805
FaqI GGGAC 2 cut(s) 1157, 1721
FauI CCCGC 2 cut(s) 153, 1702
Fnu4HI GCNGC 7 cut(s) 149, 584, 644, 908, 1089, 1725, 1794
FokI GGATG 8 cut(s) 109, 263, 470, 586, 634, 1526, 1606, 1726
FriOI GRGCYC 3 cut(s) 1501, 1911, 1978
Fsp4HI GCNGC 7 cut(s) 149, 584, 644, 908, 1089, 1725, 1794
FspBI CTAG 4 cut(s) 756, 1301, 1482, 1994
GlaI GCGC 6 cut(s) 140, 245, 268, 270, 331, 1333
GluI GCNGC 7 cut(s) 149, 584, 644, 908, 1089, 1725, 1794
GsaI CCCAGC 1 cut(s) 814
GsuI CTGGAG 2 cut(s) 1689, 1818
HaeII RGCGCY 2 cut(s) 142, 1335
HaeIII GGCC 3 cut(s) 370, 1385, 1557
HapII CCGG 8 cut(s) 299, 321, 348, 372, 411, 729, 1398, 1632
HgaI GACGC 3 cut(s) 218, 336, 1215
HhaI GCGC 6 cut(s) 141, 246, 269, 271, 332, 1334
Hin1I GRCGYC 1 cut(s) 210
Hin6I GCGC 6 cut(s) 139, 244, 267, 269, 330, 1332
HinP1I GCGC 6 cut(s) 139, 244, 267, 269, 330, 1332
HincII GTYRAC 2 cut(s) 854, 1674
HindII GTYRAC 2 cut(s) 854, 1674
HindIII AAGCTT 1 cut(s) 1247
HinfI GANTC 9 cut(s) 22, 258, 312, 434, 545, 805, 887, 1052, 2022
HpaI GTTAAC 1 cut(s) 1674
HpaII CCGG 8 cut(s) 299, 321, 348, 372, 411, 729, 1398, 1632
HphI GGTGA 9 cut(s) 485, 568, 1301, 1595, 1620, 1622, 1857, 1903, 2026
Hpy166II GTNNAC 4 cut(s) 854, 1219, 1403, 1674
Hpy188I TCNGA 7 cut(s) 109, 311, 534, 679, 688, 790, 884
Hpy8I GTNNAC 4 cut(s) 854, 1219, 1403, 1674
Hpy99I CGWCG 5 cut(s) 113, 161, 179, 200, 212
HpyAV CCTTC 7 cut(s) 62, 91, 178, 248, 564, 1196, 1741
HpyCH4III ACNGT 6 cut(s) 694, 801, 848, 1345, 1643, 1649
HpyCH4IV ACGT 2 cut(s) 407, 1179
HpyF10VI GCNNNNNNNGC 6 cut(s) 145, 719, 791, 1097, 1329, 1883
HpyF3I CTNAG 3 cut(s) 282, 639, 1887
HpySE526I ACGT 2 cut(s) 407, 1179
Hsp92I GRCGYC 1 cut(s) 210
HspAI GCGC 6 cut(s) 139, 244, 267, 269, 330, 1332
KflI GGGWCCC 1 cut(s) 1171
KspAI GTTAAC 1 cut(s) 1674
Kzo9I GATC 6 cut(s) 153, 163, 601, 1303, 1355, 1785
LmnI GCTCC 4 cut(s) 229, 1374, 1504, 1973
Lsp1109I GCAGC 4 cut(s) 595, 655, 1075, 1711
LweI GCATC 7 cut(s) 87, 683, 781, 803, 919, 1675, 1871
MaeI CTAG 4 cut(s) 756, 1301, 1482, 1994
MaeII ACGT 2 cut(s) 407, 1179
MaeIII GTNAC 5 cut(s) 403, 1615, 1643, 1927, 2032
MalI GATC 6 cut(s) 155, 165, 603, 1305, 1357, 1787
MboI GATC 6 cut(s) 153, 163, 601, 1303, 1355, 1785
MflI RGATCY 2 cut(s) 601, 1355
MhlI GDGCHC 4 cut(s) 1371, 1501, 1911, 1978
MlsI TGGCCA 1 cut(s) 1557
MluNI TGGCCA 1 cut(s) 1557
MlyI GAGTC 2 cut(s) 1046, 2031
MmeI TCCRAC 3 cut(s) 132, 1095, 1489
Mox20I TGGCCA 1 cut(s) 1557
Mph1103I ATGCAT 2 cut(s) 724, 796
MroXI GAANNNNTTC 2 cut(s) 1215, 1751
MscI TGGCCA 1 cut(s) 1557
MseI TTAA 8 cut(s) 168, 462, 1076, 1251, 1425, 1455, 1673, 1841
MslI CAYNNNNRTG 5 cut(s) 1278, 1364, 1584, 1925, 2012
Msp20I TGGCCA 1 cut(s) 1557
MspA1I CMGCKG 1 cut(s) 1709
MspI CCGG 8 cut(s) 299, 321, 348, 372, 411, 729, 1398, 1632
Mva1269I GAATGC 1 cut(s) 1751
MvaI CCWGG 7 cut(s) 385, 858, 1044, 1313, 1827, 1963, 1971
MvnI CGCG 5 cut(s) 246, 269, 271, 330, 332
MwoI GCNNNNNNNGC 6 cut(s) 145, 719, 791, 1097, 1329, 1883
NciI CCSGG 3 cut(s) 372, 373, 1632
NcoI CCATGG 2 cut(s) 1359, 1579
NdeII GATC 6 cut(s) 153, 163, 601, 1303, 1355, 1785
NlaIV GGNNCC 8 cut(s) 231, 603, 1172, 1173, 1357, 1565, 1737, 1975
NmeAIII GCCGAG 1 cut(s) 160
NmuCI GTSAC 3 cut(s) 1643, 1927, 2032
NsiI ATGCAT 2 cut(s) 724, 796
NspI RCATGY 2 cut(s) 785, 873
PauI GCGCGC 1 cut(s) 267
PcsI WCGNNNNNNNCGW 2 cut(s) 204, 1911
PctI GAATGC 1 cut(s) 1751
PdmI GAANNNNTTC 2 cut(s) 1215, 1751
PfeI GAWTC 7 cut(s) 22, 258, 312, 434, 545, 805, 887
PflMI CCANNNNNTGG 1 cut(s) 226
PfoI TCCNGGA 1 cut(s) 1042
PkrI GCNGC 7 cut(s) 150, 585, 645, 909, 1090, 1726, 1795
Ple19I CGATCG 1 cut(s) 156
PleI GAGTC 2 cut(s) 1046, 2030
PpsI GAGTC 2 cut(s) 1046, 2030
PpuMI RGGWCCY 1 cut(s) 1171
Psp124BI GAGCTC 1 cut(s) 1501
Psp5II RGGWCCY 1 cut(s) 1171
Psp6I CCWGG 7 cut(s) 383, 856, 1042, 1311, 1825, 1961, 1969
PspFI CCCAGC 1 cut(s) 810
PspGI CCWGG 7 cut(s) 383, 856, 1042, 1311, 1825, 1961, 1969
PspN4I GGNNCC 8 cut(s) 231, 603, 1172, 1173, 1357, 1565, 1737, 1975
PspPI GGNCC 4 cut(s) 369, 1171, 1383, 1735
PspPPI RGGWCCY 1 cut(s) 1171
PsuI RGATCY 2 cut(s) 601, 1355
PteI GCGCGC 1 cut(s) 267
PvuI CGATCG 1 cut(s) 156
RsaI GTAC 3 cut(s) 128, 1404, 1410
RsaNI GTAC 3 cut(s) 127, 1403, 1409
RseI CAYNNNNRTG 5 cut(s) 1278, 1364, 1584, 1925, 2012
SacI GAGCTC 1 cut(s) 1501
SaqAI TTAA 8 cut(s) 168, 462, 1076, 1251, 1425, 1455, 1673, 1841
SatI GCNGC 7 cut(s) 149, 584, 644, 908, 1089, 1725, 1794
Sau3AI GATC 6 cut(s) 153, 163, 601, 1303, 1355, 1785
Sau96I GGNCC 4 cut(s) 369, 1171, 1383, 1735
SchI GAGTC 2 cut(s) 1046, 2031
SduI GDGCHC 4 cut(s) 1371, 1501, 1911, 1978
SfaNI GCATC 7 cut(s) 87, 683, 781, 803, 919, 1675, 1871
SfcI CTRYAG 1 cut(s) 1728
SinI GGWCC 2 cut(s) 1171, 1735
SmaI CCCGGG 1 cut(s) 373
SmiMI CAYNNNNRTG 5 cut(s) 1278, 1364, 1584, 1925, 2012
SmlI CTYRAG 2 cut(s) 443, 1850
SmoI CTYRAG 2 cut(s) 443, 1850
SpeI ACTAGT 1 cut(s) 1993
SrfI GCCCGGGC 1 cut(s) 373
SsiI CCGC 9 cut(s) 146, 149, 332, 482, 567, 908, 1323, 1709, 1793
SspI AATATT 1 cut(s) 772
SspMI CTAG 4 cut(s) 756, 1301, 1482, 1994
SstI GAGCTC 1 cut(s) 1501
StyI CCWWGG 5 cut(s) 597, 895, 1359, 1544, 1579
TaaI ACNGT 6 cut(s) 694, 801, 848, 1345, 1643, 1649
TaiI ACGT 2 cut(s) 410, 1182
TaqI TCGA 2 cut(s) 515, 1495
TauI GCSGC 3 cut(s) 151, 910, 1796
TfiI GAWTC 7 cut(s) 22, 258, 312, 434, 545, 805, 887
Tru1I TTAA 8 cut(s) 168, 462, 1076, 1251, 1425, 1455, 1673, 1841
Tru9I TTAA 8 cut(s) 168, 462, 1076, 1251, 1425, 1455, 1673, 1841
TscAI CASTG 2 cut(s) 1113, 1749
TseFI GTSAC 3 cut(s) 1643, 1927, 2032
TseI GCWGC 4 cut(s) 583, 643, 1088, 1724
Tsp45I GTSAC 3 cut(s) 1643, 1927, 2032
TspDTI ATGAA 3 cut(s) 267, 1262, 1503
TspGWI ACGGA 2 cut(s) 74, 1361
TspMI CCCGGG 1 cut(s) 371
TspRI CASTG 2 cut(s) 1113, 1749
Van91I CCANNNNNTGG 1 cut(s) 226
VpaK11BI GGWCC 2 cut(s) 1171, 1735
XapI RAATTY 3 cut(s) 682, 863, 878
XbaI TCTAGA 1 cut(s) 1481
XceI RCATGY 2 cut(s) 785, 873
XcmI CCANNNNNNNNNTGG 1 cut(s) 391
XmaI CCCGGG 1 cut(s) 371
XmnI GAANNNNTTC 2 cut(s) 1215, 1751
XspI CTAG 4 cut(s) 756, 1301, 1482, 1994
Zsp2I ATGCAT 2 cut(s) 724, 796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.