MD02G1137100.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0011838
Physical Location & Seq
Reverse (-)
11461523 .. 11467268
5746 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1137100.v1.1.491

Sequence Viewer

Length: 2088 bp
ATGAGGAAGCGAGATTTGGCCATTCTCATGCTCTCCGCCTTCGCCATCTTCTTCTCTCTTCAGCACGAGGGTGATTTCTCCTTCAGAGAGGCGTGGATGCTCCTCTCCGACGACTACCCAATCAAGTTCGAAGGCGACCGCCTTCCTCCGCCGATCGTGGCCGATCTCAACGGAGACGGCAAGAAGGAAGTCCTCGTCGCCACCCACGATGCCAAAATCCAGGTTTTGGAGCCTCATAGTAGGCGTGTGGACGAAGGATTCAGCAACGCGCGCGTGCTTGCGGAGGTCAGCCTTTTGCCTGACAAAATCCGCATCTCCTCCGGCAGACAGCCTGTGGCAATGGCTACCGGGGTTATTGACAAGCTTCGGCCGGGGCAAAGACCCAGGCAAGTTTTGGTGGTTGTTACGTCGGGTTGGTCTGTTGTGTGCTTTGATTCCAACCTCAAAAGGCTGTGGGACGTCAATTTACAGGAGGATTTTCCACATAACGCCCACCATAGGGAGATTGCCATCTCAATAACTAACTACACCTTGAAGCATGGGGATACAGGATTGGTGATTGTTGGTGGAAGGATGGAAATGCAGCCTCATATTTCCATGGATCCTTTTGAAGAAATTGGGATGGCGGATAGAAGTGCTGAGCAGCATAGAAGAAATCTAACTGAAAAGGAGGCTTCTGAGAGTTCAGGAACTGTGGATTTGCGCCATTTTGCATTTTATGCATTTGCTGGTAACTCTGGAACTATTAGATGGACTAGAAAGAATGAGAATATTGAAGAGAATTCTTCAGATGCTTCACGGTTAATTCCACAGCATAACTACAAGCTTGATGTTCAGGCTATGAATAGTCATCGTCCAGGAGAGTATGAATGTAGGGAATTCAGAGAATCTATCCTTGGAGTTATGCCACATCATTGGGATAGAAGAGAAGATACTTTGTTGGAACTTGCACATTTCAGGCGGCACAAAAGGAAAACAGTGAAGAGAACATCTGGAAAGACTATTAACTTCCCTTTCCACAAGCCAGAAGAAAACCATCCTCCTGGAAAGGACTCAACAAAAAAAATTTCAAACTTGATTGGAAAAGCTACACAGTATGCTGGTTCAGCAAAATCTAAGAAGCCATATCAATATATACCTACCATAACAAACCACACTCAGCTTTGGTGGGTCCCTAATGTCGTTGTAGCTCATCAAAAAGAAGGAATAGAAGTTATTCACTTAGCATCTGGTCGCACTTTCTGTAAGCTTCATCTTCAAGAGGGTGGCCTTCATGCTGATGTAAATGGCGATGGAGTCCTAGATCATGTCCAGGCTGTAGGGGGAAATGGCGCTGAGCAGACTGTTGCTAGTGGATCCATGGAAGTGCTCCGTCCCTGTTGGGCTGTTGCGACCTCTGGTGTACCCGTTCGAGAACAACTATTTAATGCTTCGATATGTCATCATTCCCTTTTTAACTTATTCCAACATGGAGAATATTCTAGAGGCTTTGGTCGAACTCATGATTTAGCATCGTTGGAGGTAGCAACTCCCATTCTCATTCCAAGAAGAGATGGCCATAGGCATCGTAAGGGAAGCCATGGTGATGTTGTCTTCTTGACAAATCGTGGTGAGGTAACATCATACTCCCCTGGATTGCATGGCCATGATGCCATTTGGCAGTGGCAGCTGACGACGGGTGCTATATGGTCAAATCTTCCATCTCCGTCAGGGATGATGGAGGCTGGTAACGTGGTCCCTACACTGAAGTCATTCTCGTTGCGAGTTCGTGATATCCAAGAGGTGGTCCTTGCTGCCGGAGAACAAGAGGCTGTAGTGATTTCTCCTGGAGGAAGTATCGTAACATCAGTTGTCCTTCCAGCACCGCCTACACACGCCCTGATCACCGAGGACTTCTCAAACGACGGGCTCACTGATCTTATTGTTGTGACGAATACCGGGGTGTACGGGTTTGTCCAGACAAGGCAACCAGGTGCCCTCTTCTTCAGTACCCTGGTTGGTTGCCTCATACTTGTAATGGGCATCATCTTCGTGGCCCAACACCTCAACTCCATCAAAGGCAAACCCCGTGCTCCATCTTCTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

696

Amino Acids

77.23

Weight (kDa)

7.5

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011838)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51050
fragaria_vesca FvH4_1g12400 FvH4_1g12400
malus_domestica MD02G1137100.v1.1 MD15G1250800.v1.1
prunus_persica Prupe.7G163500_v2.0.a1 Prupe.7G163500_v2.0.a1
pyrus_communis pycom02g10850 pycom15g22120
rosa_chinensis RchiOBHm_Chr2g0100261
rosa_laevigata RLG00000016950
rosa_multiflora Rmu_sc0002547.1_g000015
rosa_roxburghii Rroxscaffold_2G00142440
rosa_rugosa Rorug02G0086900
rosa_samantha Rh2AG135900 Rh2BG139400 Rh2CG141200 Rh2DG141400
rosa_wichuraiana Rw2G010630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 462
AccB1I GGYRCC 1 cut(s) 1973
AccB7I CCANNNNNTGG 2 cut(s) 226, 1783
AccII CGCG 3 cut(s) 269, 271, 273
AciI CCGC 8 cut(s) 36, 139, 149, 281, 310, 626, 961, 1865
AclWI GGATC 4 cut(s) 596, 609, 1350, 1363
AcoI YGGCCR 5 cut(s) 18, 159, 368, 1555, 1642
AcsI RAATTY 3 cut(s) 781, 878, 1065
AcuI CTGAAG 5 cut(s) 44, 67, 771, 1766, 1969
AcyI GRCGYC 1 cut(s) 459
AfaI GTAC 3 cut(s) 1404, 1946, 1990
AfiI CCNNNNNNNGG 4 cut(s) 226, 498, 499, 1783
AgsI TTSAA 5 cut(s) 535, 611, 776, 1071, 1259
AjnI CCWGG 9 cut(s) 219, 383, 856, 1042, 1311, 1630, 1825, 1969, 1992
AjuI GAANNNNNNNTTGG 3 cut(s) 31, 879, 911
AleI CACNNNNGTG 1 cut(s) 69
AluBI AGCT 7 cut(s) 364, 826, 1088, 1162, 1190, 1249, 1669
AluI AGCT 7 cut(s) 364, 826, 1088, 1162, 1190, 1249, 1669
Alw21I GWGCWC 2 cut(s) 1371, 2074
Alw26I GTCTC 1 cut(s) 168
AlwI GGATC 4 cut(s) 596, 609, 1350, 1363
AlwNI CAGNNNCTG 1 cut(s) 692
AoxI GGCC 7 cut(s) 18, 159, 368, 1267, 1555, 1642, 2034
ApeKI GCWGC 4 cut(s) 583, 643, 1666, 1793
ApoI RAATTY 3 cut(s) 781, 878, 1065
Asp700I GAANNNNTTC 2 cut(s) 1215, 1751
AspLEI GCGC 4 cut(s) 271, 273, 705, 1334
AspS9I GGNCC 4 cut(s) 1171, 1735, 1786, 2035
AsuC2I CCSGG 3 cut(s) 349, 372, 1939
AsuHPI GGTGA 5 cut(s) 83, 568, 1595, 1622, 1876
AsuII TTCGAA 1 cut(s) 129
AvaII GGWCC 3 cut(s) 1171, 1735, 1786
BaeGI GKGCMC 1 cut(s) 1978
BalI TGGCCA 3 cut(s) 20, 1557, 1644
BamHI GGATCC 2 cut(s) 601, 1355
BanI GGYRCC 1 cut(s) 1973
BanII GRGCYC 1 cut(s) 1911
BarI GAAGNNNNNNTAC 2 cut(s) 916, 948
BauI CACGAG 1 cut(s) 65
BbsI GAAGAC 1 cut(s) 1585
Bbv12I GWGCWC 2 cut(s) 1371, 2074
BbvI GCAGC 4 cut(s) 595, 655, 1678, 1780
BceAI ACGGC 1 cut(s) 193
BcgI CGANNNNNNTGC 2 cut(s) 2011, 2045
BciT130I CCWGG 9 cut(s) 221, 385, 858, 1044, 1313, 1632, 1827, 1971, 1994
BciVI GTATCC 1 cut(s) 538
BclI TGATCA 1 cut(s) 1881
BcnI CCSGG 3 cut(s) 349, 372, 1939
BcoDI GTCTC 1 cut(s) 168
BfaI CTAG 4 cut(s) 756, 1301, 1350, 1482
BfmI CTRYAG 2 cut(s) 1317, 1812
BfoI RGCGCY 1 cut(s) 1335
BfuI GTATCC 1 cut(s) 538
BisI GCNGC 5 cut(s) 584, 644, 962, 1667, 1794
BlpI GCTNAGC 2 cut(s) 639, 1335
BlsI GCNGC 5 cut(s) 585, 645, 963, 1668, 1795
Bme18I GGWCC 3 cut(s) 1171, 1735, 1786
BmgT120I GGNCC 4 cut(s) 1171, 1735, 1786, 2035
BmiI GGNNCC 7 cut(s) 231, 603, 1172, 1173, 1357, 1737, 1975
BmsI GCATC 9 cut(s) 87, 199, 321, 781, 1235, 1520, 1573, 1639, 2031
BpiI GAAGAC 1 cut(s) 1585
BplI GAGNNNNNCTC 2 cut(s) 1880, 1912
BpmI CTGGAG 1 cut(s) 1848
Bpu1102I GCTNAGC 2 cut(s) 639, 1335
Bpu14I TTCGAA 1 cut(s) 129
BpuMI CCSGG 3 cut(s) 349, 372, 1939
BsaBI GATNNNNATC 1 cut(s) 509
BsaHI GRCGYC 1 cut(s) 459
BsaXI ACNNNNNCTCC 2 cut(s) 2033, 2063
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 498, 499, 1783
Bse3DI GCAATG 1 cut(s) 345
Bse8I GATNNNNATC 1 cut(s) 509
BseBI CCWGG 9 cut(s) 221, 385, 858, 1044, 1313, 1632, 1827, 1971, 1994
BseGI GGATG 5 cut(s) 102, 579, 627, 1036, 1719
BseJI GATNNNNATC 1 cut(s) 509
BseLI CCNNNNNNNGG 4 cut(s) 226, 498, 499, 1783
BseMI GCAATG 1 cut(s) 345
BseMII CTCAG 4 cut(s) 630, 669, 1172, 1326
BsePI GCGCGC 1 cut(s) 269
BseRI GAGGAG 2 cut(s) 92, 307
BseSI GKGCMC 1 cut(s) 1978
BseX3I CGGCCG 1 cut(s) 368
BseXI GCAGC 4 cut(s) 595, 655, 1678, 1780
Bsh1236I CGCG 3 cut(s) 269, 271, 273
Bsh1285I CGRYCG 3 cut(s) 139, 156, 371
BshFI GGCC 7 cut(s) 20, 161, 370, 1269, 1557, 1644, 2036
BshNI GGYRCC 1 cut(s) 1973
BsiEI CGRYCG 3 cut(s) 139, 156, 371
BsiHKAI GWGCWC 2 cut(s) 1371, 2074
BsiSI CCGG 5 cut(s) 321, 348, 371, 1797, 1938
BslFI GGGAC 4 cut(s) 470, 1157, 1359, 1721
BslI CCNNNNNNNGG 4 cut(s) 226, 498, 499, 1783
BsmAI GTCTC 1 cut(s) 168
BsmBI CGTCTC 1 cut(s) 168
BsmFI GGGAC 4 cut(s) 470, 1157, 1359, 1721
BsnI GGCC 7 cut(s) 20, 161, 370, 1269, 1557, 1644, 2036
Bsp119I TTCGAA 1 cut(s) 129
Bsp1286I GDGCHC 4 cut(s) 1371, 1911, 1978, 2074
Bsp143I GATC 7 cut(s) 153, 163, 601, 1303, 1355, 1881, 1915
Bsp1720I GCTNAGC 2 cut(s) 639, 1335
Bsp19I CCATGG 3 cut(s) 597, 1359, 1579
BspACI CCGC 8 cut(s) 36, 139, 149, 281, 310, 626, 961, 1865
BspANI GGCC 7 cut(s) 20, 161, 370, 1269, 1557, 1644, 2036
BspCNI CTCAG 4 cut(s) 631, 670, 1171, 1327
BspFNI CGCG 3 cut(s) 269, 271, 273
BspHI TCATGA 1 cut(s) 1501
BspLI GGNNCC 7 cut(s) 231, 603, 1172, 1173, 1357, 1737, 1975
BspPI GGATC 4 cut(s) 596, 609, 1350, 1363
BspT104I TTCGAA 1 cut(s) 129
BspT107I GGYRCC 1 cut(s) 1973
BsrDI GCAATG 1 cut(s) 345
BssHII GCGCGC 1 cut(s) 269
BssMI GATC 7 cut(s) 153, 163, 601, 1303, 1355, 1881, 1915
BssNI GRCGYC 1 cut(s) 459
BssSI CACGAG 1 cut(s) 65
BssT1I CCWWGG 4 cut(s) 597, 895, 1359, 1579
Bst2BI CACGAG 1 cut(s) 65
Bst2UI CCWGG 9 cut(s) 221, 385, 858, 1044, 1313, 1632, 1827, 1971, 1994
Bst4CI ACNGT 5 cut(s) 694, 801, 979, 1095, 1345
Bst6I CTCTTC 6 cut(s) 63, 771, 919, 977, 1543, 1985
BstACI GRCGYC 1 cut(s) 459
BstAPI GCANNNNNTGC 1 cut(s) 719
BstBI TTCGAA 1 cut(s) 129
BstC8I GCNNGC 3 cut(s) 271, 275, 279
BstDEI CTNAG 7 cut(s) 639, 678, 1116, 1158, 1222, 1335, 2082
BstDSI CCRYGG 3 cut(s) 597, 1359, 1579
BstF5I GGATG 5 cut(s) 102, 579, 627, 1036, 1719
BstFNI CGCG 3 cut(s) 269, 271, 273
BstH2I RGCGCY 1 cut(s) 1335
BstHHI GCGC 4 cut(s) 271, 273, 705, 1334
BstKTI GATC 7 cut(s) 156, 166, 604, 1306, 1358, 1884, 1918
BstMAI GTCTC 1 cut(s) 168
BstMBI GATC 7 cut(s) 153, 163, 601, 1303, 1355, 1881, 1915
BstMCI CGRYCG 3 cut(s) 139, 156, 371
BstMWI GCNNNNNNNGC 4 cut(s) 270, 719, 1106, 1666
BstNI CCWGG 9 cut(s) 221, 385, 858, 1044, 1313, 1632, 1827, 1971, 1994
BstSFI CTRYAG 2 cut(s) 1317, 1812
BstSLI GKGCMC 1 cut(s) 1978
BstUI CGCG 3 cut(s) 269, 271, 273
BstV1I GCAGC 4 cut(s) 595, 655, 1678, 1780
BstV2I GAAGAC 1 cut(s) 1585
BstX2I RGATCY 2 cut(s) 601, 1355
BstXI CCANNNNNNTGG 2 cut(s) 915, 1043
BstYI RGATCY 2 cut(s) 601, 1355
BstZI CGGCCG 1 cut(s) 368
BsuI GTATCC 1 cut(s) 538
BsuRI GGCC 7 cut(s) 20, 161, 370, 1269, 1557, 1644, 2036
BtgI CCRYGG 3 cut(s) 597, 1359, 1579
BtgZI GCGATG 1 cut(s) 1305
BtsCI GGATG 5 cut(s) 102, 579, 627, 1036, 1719
BtsI GCAGTG 1 cut(s) 1667
BtsIMutI CAGTG 4 cut(s) 984, 1667, 1742, 1911
Cac8I GCNNGC 3 cut(s) 271, 275, 279
CaiI CAGNNNCTG 1 cut(s) 692
CciI TCATGA 1 cut(s) 1501
CfoI GCGC 4 cut(s) 271, 273, 705, 1334
Cfr13I GGNCC 4 cut(s) 1171, 1735, 1786, 2035
CsiI ACCWGGT 1 cut(s) 1969
Csp6I GTAC 3 cut(s) 1403, 1945, 1989
CviQI GTAC 3 cut(s) 1403, 1945, 1989
DdeI CTNAG 7 cut(s) 639, 678, 1116, 1158, 1222, 1335, 2082
DpnI GATC 7 cut(s) 155, 165, 603, 1305, 1357, 1883, 1917
DpnII GATC 7 cut(s) 153, 163, 601, 1303, 1355, 1881, 1915
EaeI YGGCCR 5 cut(s) 18, 159, 368, 1555, 1642
EagI CGGCCG 1 cut(s) 368
Eam1104I CTCTTC 6 cut(s) 63, 771, 919, 977, 1543, 1985
EarI CTCTTC 6 cut(s) 63, 771, 919, 977, 1543, 1985
EciI GGCGGA 3 cut(s) 25, 138, 641
EclXI CGGCCG 1 cut(s) 368
Eco130I CCWWGG 4 cut(s) 597, 895, 1359, 1579
Eco24I GRGCYC 1 cut(s) 1911
Eco32I GATATC 1 cut(s) 1774
Eco47I GGWCC 3 cut(s) 1171, 1735, 1786
Eco52I CGGCCG 1 cut(s) 368
Eco57I CTGAAG 5 cut(s) 44, 67, 771, 1766, 1969
EcoO109I RGGNCCY 1 cut(s) 1171
EcoRI GAATTC 2 cut(s) 781, 878
EcoRII CCWGG 9 cut(s) 219, 383, 856, 1042, 1311, 1630, 1825, 1969, 1992
EcoRV GATATC 1 cut(s) 1774
EcoT14I CCWWGG 4 cut(s) 597, 895, 1359, 1579
EcoT22I ATGCAT 1 cut(s) 724
EcoT38I GRGCYC 1 cut(s) 1911
ErhI CCWWGG 4 cut(s) 597, 895, 1359, 1579
Esp3I CGTCTC 1 cut(s) 168
FaqI GGGAC 4 cut(s) 470, 1157, 1359, 1721
FbaI TGATCA 1 cut(s) 1881
Fnu4HI GCNGC 5 cut(s) 584, 644, 962, 1667, 1794
FokI GGATG 5 cut(s) 109, 586, 634, 1023, 1726
FriOI GRGCYC 1 cut(s) 1911
Fsp4HI GCNGC 5 cut(s) 584, 644, 962, 1667, 1794
FspBI CTAG 4 cut(s) 756, 1301, 1350, 1482
GlaI GCGC 4 cut(s) 270, 272, 704, 1333
GluI GCNGC 5 cut(s) 584, 644, 962, 1667, 1794
GsuI CTGGAG 1 cut(s) 1848
HaeII RGCGCY 1 cut(s) 1335
HaeIII GGCC 7 cut(s) 20, 161, 370, 1269, 1557, 1644, 2036
HapII CCGG 5 cut(s) 321, 348, 371, 1797, 1938
HhaI GCGC 4 cut(s) 271, 273, 705, 1334
Hin1I GRCGYC 1 cut(s) 459
Hin6I GCGC 4 cut(s) 269, 271, 703, 1332
HinP1I GCGC 4 cut(s) 269, 271, 703, 1332
HindIII AAGCTT 3 cut(s) 362, 824, 1247
HinfI GANTC 5 cut(s) 258, 434, 887, 1052, 1296
HpaII CCGG 5 cut(s) 321, 348, 371, 1797, 1938
HphI GGTGA 5 cut(s) 83, 568, 1595, 1622, 1876
Hpy166II GTNNAC 3 cut(s) 250, 1403, 1945
Hpy188I TCNGA 5 cut(s) 86, 109, 679, 790, 884
Hpy8I GTNNAC 3 cut(s) 250, 1403, 1945
Hpy99I CGWCG 5 cut(s) 113, 200, 412, 1678, 1907
HpyCH4III ACNGT 5 cut(s) 694, 801, 979, 1095, 1345
HpyCH4IV ACGT 3 cut(s) 407, 459, 1731
HpyCH4V TGCA 5 cut(s) 583, 713, 722, 950, 1639
HpyF10VI GCNNNNNNNGC 4 cut(s) 270, 719, 1106, 1666
HpyF3I CTNAG 7 cut(s) 639, 678, 1116, 1158, 1222, 1335, 2082
HpySE526I ACGT 3 cut(s) 407, 459, 1731
Hsp92I GRCGYC 1 cut(s) 459
HspAI GCGC 4 cut(s) 269, 271, 703, 1332
KflI GGGWCCC 1 cut(s) 1171
Ksp22I TGATCA 1 cut(s) 1881
Kzo9I GATC 7 cut(s) 153, 163, 601, 1303, 1355, 1881, 1915
LmnI GCTCC 4 cut(s) 105, 229, 1374, 2077
Lsp1109I GCAGC 4 cut(s) 595, 655, 1678, 1780
LweI GCATC 9 cut(s) 87, 199, 321, 781, 1235, 1520, 1573, 1639, 2031
MabI ACCWGGT 1 cut(s) 1969
MaeI CTAG 4 cut(s) 756, 1301, 1350, 1482
MaeII ACGT 3 cut(s) 407, 459, 1731
MaeIII GTNAC 6 cut(s) 403, 731, 1615, 1727, 1840, 1927
MalI GATC 7 cut(s) 155, 165, 603, 1305, 1357, 1883, 1917
MauBI CGCGCGCG 1 cut(s) 269
MboI GATC 7 cut(s) 153, 163, 601, 1303, 1355, 1881, 1915
MflI RGATCY 2 cut(s) 601, 1355
MhlI GDGCHC 4 cut(s) 1371, 1911, 1978, 2074
MlsI TGGCCA 3 cut(s) 20, 1557, 1644
MluCI AATT 6 cut(s) 463, 615, 781, 804, 878, 1065
MluNI TGGCCA 3 cut(s) 20, 1557, 1644
MlyI GAGTC 2 cut(s) 1046, 1305
MmeI TCCRAC 5 cut(s) 132, 462, 921, 1489, 1497
Mox20I TGGCCA 3 cut(s) 20, 1557, 1644
Mph1103I ATGCAT 1 cut(s) 724
MroXI GAANNNNTTC 2 cut(s) 1215, 1751
MscI TGGCCA 3 cut(s) 20, 1557, 1644
MseI TTAA 4 cut(s) 803, 1005, 1425, 1455
MslI CAYNNNNRTG 7 cut(s) 26, 69, 1278, 1364, 1584, 1644, 2030
Msp20I TGGCCA 3 cut(s) 20, 1557, 1644
MspA1I CMGCKG 1 cut(s) 1669
MspI CCGG 5 cut(s) 321, 348, 371, 1797, 1938
MvaI CCWGG 9 cut(s) 221, 385, 858, 1044, 1313, 1632, 1827, 1971, 1994
MvnI CGCG 3 cut(s) 269, 271, 273
MwoI GCNNNNNNNGC 4 cut(s) 270, 719, 1106, 1666
NciI CCSGG 3 cut(s) 349, 372, 1939
NcoI CCATGG 3 cut(s) 597, 1359, 1579
NdeII GATC 7 cut(s) 153, 163, 601, 1303, 1355, 1881, 1915
NlaIV GGNNCC 7 cut(s) 231, 603, 1172, 1173, 1357, 1737, 1975
NmuCI GTSAC 1 cut(s) 1927
NsiI ATGCAT 1 cut(s) 724
NspV TTCGAA 1 cut(s) 129
OliI CACNNNNGTG 1 cut(s) 69
PagI TCATGA 1 cut(s) 1501
PauI GCGCGC 1 cut(s) 269
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PdmI GAANNNNTTC 2 cut(s) 1215, 1751
PfeI GAWTC 3 cut(s) 258, 434, 887
PflMI CCANNNNNTGG 2 cut(s) 226, 1783
PfoI TCCNGGA 3 cut(s) 856, 1042, 1825
PkrI GCNGC 5 cut(s) 585, 645, 963, 1668, 1795
Ple19I CGATCG 1 cut(s) 156
PleI GAGTC 2 cut(s) 1046, 1304
PpsI GAGTC 2 cut(s) 1046, 1304
PpuMI RGGWCCY 1 cut(s) 1171
Psp5II RGGWCCY 1 cut(s) 1171
Psp6I CCWGG 9 cut(s) 219, 383, 856, 1042, 1311, 1630, 1825, 1969, 1992
PspGI CCWGG 9 cut(s) 219, 383, 856, 1042, 1311, 1630, 1825, 1969, 1992
PspN4I GGNNCC 7 cut(s) 231, 603, 1172, 1173, 1357, 1737, 1975
PspPI GGNCC 4 cut(s) 1171, 1735, 1786, 2035
PspPPI RGGWCCY 1 cut(s) 1171
PstNI CAGNNNCTG 1 cut(s) 692
PsuI RGATCY 2 cut(s) 601, 1355
PteI GCGCGC 1 cut(s) 269
PvuI CGATCG 1 cut(s) 156
PvuII CAGCTG 1 cut(s) 1669
RsaI GTAC 3 cut(s) 1404, 1946, 1990
RsaNI GTAC 3 cut(s) 1403, 1945, 1989
RseI CAYNNNNRTG 7 cut(s) 26, 69, 1278, 1364, 1584, 1644, 2030
SaqAI TTAA 4 cut(s) 803, 1005, 1425, 1455
SatI GCNGC 5 cut(s) 584, 644, 962, 1667, 1794
Sau3AI GATC 7 cut(s) 153, 163, 601, 1303, 1355, 1881, 1915
Sau96I GGNCC 4 cut(s) 1171, 1735, 1786, 2035
SchI GAGTC 2 cut(s) 1046, 1305
SduI GDGCHC 4 cut(s) 1371, 1911, 1978, 2074
SexAI ACCWGGT 1 cut(s) 1969
SfaNI GCATC 9 cut(s) 87, 199, 321, 781, 1235, 1520, 1573, 1639, 2031
SfcI CTRYAG 2 cut(s) 1317, 1812
SfuI TTCGAA 1 cut(s) 129
SinI GGWCC 3 cut(s) 1171, 1735, 1786
SmiMI CAYNNNNRTG 7 cut(s) 26, 69, 1278, 1364, 1584, 1644, 2030
Sse9I AATT 6 cut(s) 463, 615, 781, 804, 878, 1065
SsiI CCGC 8 cut(s) 36, 139, 149, 281, 310, 626, 961, 1865
SspI AATATT 2 cut(s) 772, 1478
SspMI CTAG 4 cut(s) 756, 1301, 1350, 1482
StyI CCWWGG 4 cut(s) 597, 895, 1359, 1579
TaaI ACNGT 5 cut(s) 694, 801, 979, 1095, 1345
TaiI ACGT 3 cut(s) 410, 462, 1734
TaqI TCGA 4 cut(s) 129, 1411, 1433, 1495
TasI AATT 6 cut(s) 463, 615, 781, 804, 878, 1065
TauI GCSGC 1 cut(s) 964
TfiI GAWTC 3 cut(s) 258, 434, 887
Tru1I TTAA 4 cut(s) 803, 1005, 1425, 1455
Tru9I TTAA 4 cut(s) 803, 1005, 1425, 1455
TscAI CASTG 4 cut(s) 984, 1667, 1749, 1918
TseFI GTSAC 1 cut(s) 1927
TseI GCWGC 4 cut(s) 583, 643, 1666, 1793
Tsp45I GTSAC 1 cut(s) 1927
TspDTI ATGAA 4 cut(s) 857, 882, 1241, 1262
TspGWI ACGGA 3 cut(s) 186, 1361, 1695
TspRI CASTG 4 cut(s) 984, 1667, 1749, 1918
Van91I CCANNNNNTGG 2 cut(s) 226, 1783
VpaK11BI GGWCC 3 cut(s) 1171, 1735, 1786
XapI RAATTY 3 cut(s) 781, 878, 1065
XbaI TCTAGA 1 cut(s) 1481
XcmI CCANNNNNNNNNTGG 1 cut(s) 391
XmnI GAANNNNTTC 2 cut(s) 1215, 1751
XspI CTAG 4 cut(s) 756, 1301, 1350, 1482
ZraI GACGTC 1 cut(s) 460
Zsp2I ATGCAT 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.