MD15G1250800.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0011838
Physical Location & Seq
Reverse (-)
21099034 .. 21104290
5257 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1250800.v1.1.491

Sequence Viewer

Length: 2088 bp
ATGAGGAAGCGAGATTTGGCAATTCTCATGCTCTGCGCCTTCGCCATCTTCTTCTCTCTTCAGCACGAGGGTGATTTCTCCTTCAGAGAGGCGTGGATGCACCTCTCCGACGACTACCCAATCAAGTTCGAAGGCGACCGCCTTCCTCCGCCGATCGTCGCCGATCTCAACGGCGACGGCAAGAAGGAAGTCCTCATCGCCACTCACGATGCCAAAATCCAGGTTTTGGAGCCTCATAGTAGGCGTGTGGACGAAGGATTCAGCAACGCGCGTGTGCTTGCGGAGGTGAGCCTTTTGCCTGACAAAATCCGCATCTCATCCGGCAGACGGGCCGTGGCAATGGCTACCGGGGTTATTGACAAGCTTAGGCCGGGGCAAAGACCTAGGCAAGTTTTGGTCGTTGTTACGTCGGGTTGGTCTGTTATGTGCTTTGATTCCAACCTCCAAAGGCTGTGGAAAGTCGATTTACAGGAGGATTTTCCACATAATGCTCACCATAGGGAGATTGCCATCTCAATAAGTAATTACACCTTGAAGCATGGGGATACAGGATTGGTGATTGTTGGTGGGAGGATGGAAATGCAGGCTCATATTTCCATGGACCCTTTTGAAGAAATTGGGATGGCAGAGAGAAGTGCTGAGCAGCATAGAAGAAATTTAACTGAAAAGGAGGCTTCTGGGAGTTCAGGAACTGTGGATTTACGCCATTTTGCTTTTTATGCATTTGCTGGCAACTCTGGAACTGTGAGATGGACTAGAAAGAATGAGAATATTGAAGAGAATTCTTCAGATGCTTCACGGTTAATTCCACAGCATAACTACAAACTTGATGTTCAGGCTATGAACAGTCGTCGCCCAGGAGAGTATGAATGTAGGGAATTCAGAGAATCTATCCTTGGAGTTATGCCACATCATTGGGATAGAAGAGAAGATACTTTGTTGGAACTTGCACATTTCAGGCGGCACAAAAGGAAAACATTGAAGAGAACATCCGGAAAGACTATTAACTTACCTTTCCACAAGCCAGAAGAAAACCATCTTCCTGGAAAGGACTCAACAAAAAAAATTTCAAACTTGATTGGAAAAGCTACACAGTATGCTGGTTCAGCAAAACCTAAGAAGCCATATCAATATATTCCTACCATAACAAACCACACTCAGCTTTGGTGGGTCCCTAATGTCGTTGTAGCTCATCAAAAAGAAGGAATAGAAGTTATTCACTTGGCGACTGGCCGCACCTTCTGTAAGCTTCATCTTCAAGAGGGCGGCCTTCATGCTGATGTAAATGGTGATGGAGTCCTAGATCATGTCCAGGCTGTAGGGGGAAATGGCGCTGAGCAGACTGTTGCTAGTGGATCCATGGAAGTGCTTCGTCCCTGTTGGGCTGTTGCGACCTCTGGTGTACCCGTACGAGAGCAACTATTTAATGCTTCTATATGTCATCATTCCCTTTTTAACGTATTCCAACATGGAGAATATTCTAGAGGCTTTGGCCGAACTCATGATTTAGCTTCGTTGGAGGTAGCAACTCCCATTCTCATTCCAAGAAGGGATGGCCATAGGCATCGTAAGGGAAGTCATGGTGATGTTGTCTTCCTGACAAATCGTGGTGAGGTAACTTCATACTCCCCTGGATTGCATGGTCATGACGCCGTTTGGCAGTGGCATTTGACGACGGGTGCTATATGGTCAAATCTTCCATCTCCATCAGGGATGACGGAAGCTGGTAACGTGGTCCCTACACTGAAGTCATTCTCGTTGCGAGTTCATGATATTCAAGAAGTGGTCCTTGCTGGTGGAGAACAACAGGCTGTGGTGATTTCTCCTGGAGGAAGTATTGTAACATCCATTGACCTTCCAGCACCGCCTACATACGCGCTGATCACCGAGGACTTCTCAAACGATGGGCTTACTGATCTTATTGTTGTGACCAATACCGGGGTGTACGGGTTCGTCCAGACCAGGCAACCAGGTGCTTTCTTTTTCAGCACCCTGGTTGGTTGCCTCATACTTGTAATGGGAATCATATTCGTGACCCAACACCTCAACTCCATCAAGGGTAAGCCCCGTGCTTCATCTTCTCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

696

Amino Acids

77.3

Weight (kDa)

8.11

Isoelectric Point (pI)

40.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011838)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51050
fragaria_vesca FvH4_1g12400 FvH4_1g12400
malus_domestica MD02G1137100.v1.1 MD15G1250800.v1.1
prunus_persica Prupe.7G163500_v2.0.a1 Prupe.7G163500_v2.0.a1
pyrus_communis pycom02g10850 pycom15g22120
rosa_chinensis RchiOBHm_Chr2g0100261
rosa_laevigata RLG00000016950
rosa_multiflora Rmu_sc0002547.1_g000015
rosa_roxburghii Rroxscaffold_2G00142440
rosa_rugosa Rorug02G0086900
rosa_samantha Rh2AG135900 Rh2BG139400 Rh2CG141200 Rh2DG141400
rosa_wichuraiana Rw2G010630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 226
AccII CGCG 3 cut(s) 269, 271, 1877
AccIII TCCGGA 1 cut(s) 992
AciI CCGC 8 cut(s) 139, 149, 281, 310, 961, 1234, 1266, 1865
AclWI GGATC 2 cut(s) 1350, 1363
AcoI YGGCCR 3 cut(s) 1231, 1492, 1555
AcsI RAATTY 4 cut(s) 655, 781, 878, 1065
AcuI CTGAAG 4 cut(s) 44, 67, 771, 1766
AcyI GRCGYC 1 cut(s) 1650
AfaI GTAC 3 cut(s) 1404, 1410, 1946
AfiI CCNNNNNNNGG 3 cut(s) 226, 327, 1938
AgsI TTSAA 7 cut(s) 535, 611, 776, 982, 1071, 1259, 1778
AjnI CCWGG 9 cut(s) 219, 856, 1042, 1311, 1630, 1825, 1961, 1969, 1992
AjuI GAANNNNNNNTTGG 3 cut(s) 31, 879, 911
AleI CACNNNNGTG 1 cut(s) 69
AluBI AGCT 7 cut(s) 364, 1088, 1162, 1190, 1249, 1511, 1724
AluI AGCT 7 cut(s) 364, 1088, 1162, 1190, 1249, 1511, 1724
AlwI GGATC 2 cut(s) 1350, 1363
AlwNI CAGNNNCTG 1 cut(s) 692
Aor13HI TCCGGA 1 cut(s) 992
AoxI GGCC 6 cut(s) 330, 368, 1231, 1267, 1492, 1555
ApeKI GCWGC 1 cut(s) 643
ApoI RAATTY 4 cut(s) 655, 781, 878, 1065
Asp700I GAANNNNTTC 3 cut(s) 1215, 1368, 1751
AspA2I CCTAGG 1 cut(s) 383
AspLEI GCGC 4 cut(s) 38, 271, 1334, 1879
AspS9I GGNCC 5 cut(s) 330, 601, 1171, 1735, 1786
AsuC2I CCSGG 3 cut(s) 349, 372, 1939
AsuHPI GGTGA 9 cut(s) 83, 298, 485, 568, 1301, 1595, 1622, 1828, 1876
AsuII TTCGAA 1 cut(s) 129
AvaII GGWCC 4 cut(s) 601, 1171, 1735, 1786
AvrII CCTAGG 1 cut(s) 383
BalI TGGCCA 1 cut(s) 1557
BamHI GGATCC 1 cut(s) 1355
BarI GAAGNNNNNNTAC 2 cut(s) 916, 948
BauI CACGAG 1 cut(s) 65
BbsI GAAGAC 1 cut(s) 1585
BbvI GCAGC 1 cut(s) 655
BceAI ACGGC 4 cut(s) 187, 193, 317, 1637
BciT130I CCWGG 9 cut(s) 221, 858, 1044, 1313, 1632, 1827, 1963, 1971, 1994
BciVI GTATCC 1 cut(s) 538
BclI TGATCA 1 cut(s) 1881
BcnI CCSGG 3 cut(s) 349, 372, 1939
BfaI CTAG 5 cut(s) 384, 756, 1301, 1350, 1482
BfmI CTRYAG 1 cut(s) 1317
BfoI RGCGCY 1 cut(s) 1335
BfuI GTATCC 1 cut(s) 538
BisI GCNGC 4 cut(s) 644, 962, 1234, 1267
BlnI CCTAGG 1 cut(s) 383
BlpI GCTNAGC 2 cut(s) 639, 1335
BlsI GCNGC 4 cut(s) 645, 963, 1235, 1268
Bme18I GGWCC 4 cut(s) 601, 1171, 1735, 1786
BmgT120I GGNCC 5 cut(s) 330, 601, 1171, 1735, 1786
BmiI GGNNCC 6 cut(s) 231, 603, 1172, 1173, 1357, 1737
BmsI GCATC 5 cut(s) 87, 199, 321, 781, 1573
BpiI GAAGAC 1 cut(s) 1585
BplI GAGNNNNNCTC 2 cut(s) 1880, 1912
BpmI CTGGAG 1 cut(s) 1848
Bpu10I CCTNAGC 1 cut(s) 365
Bpu1102I GCTNAGC 2 cut(s) 639, 1335
Bpu14I TTCGAA 1 cut(s) 129
BpuMI CCSGG 3 cut(s) 349, 372, 1939
BsaBI GATNNNNATC 1 cut(s) 509
BsaHI GRCGYC 1 cut(s) 1650
BsaWI WCCGGW 1 cut(s) 992
BsaXI ACNNNNNCTCC 2 cut(s) 2033, 2063
Bsc4I CCNNNNNNNGG 3 cut(s) 226, 327, 1938
Bse1I ACTGG 1 cut(s) 1234
Bse3DI GCAATG 1 cut(s) 345
Bse8I GATNNNNATC 1 cut(s) 509
BseAI TCCGGA 1 cut(s) 992
BseBI CCWGG 9 cut(s) 221, 858, 1044, 1313, 1632, 1827, 1963, 1971, 1994
BseGI GGATG 8 cut(s) 102, 317, 579, 627, 989, 1558, 1719, 1844
BseJI GATNNNNATC 1 cut(s) 509
BseLI CCNNNNNNNGG 3 cut(s) 226, 327, 1938
BseMI GCAATG 1 cut(s) 345
BseMII CTCAG 3 cut(s) 630, 1172, 1326
BseNI ACTGG 1 cut(s) 1234
BseXI GCAGC 1 cut(s) 655
Bsh1236I CGCG 3 cut(s) 269, 271, 1877
Bsh1285I CGRYCG 2 cut(s) 139, 156
BshFI GGCC 6 cut(s) 332, 370, 1233, 1269, 1494, 1557
BsiEI CGRYCG 2 cut(s) 139, 156
BsiSI CCGG 5 cut(s) 321, 348, 371, 993, 1938
BsiWI CGTACG 1 cut(s) 1408
BslFI GGGAC 3 cut(s) 1157, 1359, 1721
BslI CCNNNNNNNGG 3 cut(s) 226, 327, 1938
BsmFI GGGAC 3 cut(s) 1157, 1359, 1721
BsnI GGCC 6 cut(s) 332, 370, 1233, 1269, 1494, 1557
Bsp119I TTCGAA 1 cut(s) 129
Bsp13I TCCGGA 1 cut(s) 992
Bsp143I GATC 6 cut(s) 153, 163, 1303, 1355, 1881, 1915
Bsp1720I GCTNAGC 2 cut(s) 639, 1335
Bsp19I CCATGG 2 cut(s) 597, 1359
BspACI CCGC 8 cut(s) 139, 149, 281, 310, 961, 1234, 1266, 1865
BspANI GGCC 6 cut(s) 332, 370, 1233, 1269, 1494, 1557
BspCNI CTCAG 3 cut(s) 631, 1171, 1327
BspEI TCCGGA 1 cut(s) 992
BspFNI CGCG 3 cut(s) 269, 271, 1877
BspHI TCATGA 3 cut(s) 1501, 1645, 1768
BspLI GGNNCC 6 cut(s) 231, 603, 1172, 1173, 1357, 1737
BspPI GGATC 2 cut(s) 1350, 1363
BspT104I TTCGAA 1 cut(s) 129
BsrDI GCAATG 1 cut(s) 345
BsrI ACTGG 1 cut(s) 1234
BssMI GATC 6 cut(s) 153, 163, 1303, 1355, 1881, 1915
BssNI GRCGYC 1 cut(s) 1650
BssSI CACGAG 1 cut(s) 65
BssT1I CCWWGG 4 cut(s) 383, 597, 895, 1359
Bst2BI CACGAG 1 cut(s) 65
Bst2UI CCWGG 9 cut(s) 221, 858, 1044, 1313, 1632, 1827, 1963, 1971, 1994
Bst4CI ACNGT 6 cut(s) 694, 745, 801, 848, 1095, 1345
Bst6I CTCTTC 4 cut(s) 63, 771, 919, 977
BstACI GRCGYC 1 cut(s) 1650
BstBI TTCGAA 1 cut(s) 129
BstC8I GCNNGC 3 cut(s) 279, 585, 730
BstDEI CTNAG 5 cut(s) 365, 639, 1116, 1158, 1335
BstDSI CCRYGG 3 cut(s) 333, 597, 1359
BstF5I GGATG 8 cut(s) 102, 317, 579, 627, 989, 1558, 1719, 1844
BstFNI CGCG 3 cut(s) 269, 271, 1877
BstH2I RGCGCY 1 cut(s) 1335
BstHHI GCGC 4 cut(s) 38, 271, 1334, 1879
BstKTI GATC 6 cut(s) 156, 166, 1306, 1358, 1884, 1918
BstMBI GATC 6 cut(s) 153, 163, 1303, 1355, 1881, 1915
BstMCI CGRYCG 2 cut(s) 139, 156
BstMWI GCNNNNNNNGC 2 cut(s) 719, 1106
BstNI CCWGG 9 cut(s) 221, 858, 1044, 1313, 1632, 1827, 1963, 1971, 1994
BstSFI CTRYAG 1 cut(s) 1317
BstUI CGCG 3 cut(s) 269, 271, 1877
BstV1I GCAGC 1 cut(s) 655
BstV2I GAAGAC 1 cut(s) 1585
BstX2I RGATCY 1 cut(s) 1355
BstXI CCANNNNNNTGG 2 cut(s) 915, 1043
BstYI RGATCY 1 cut(s) 1355
BsuI GTATCC 1 cut(s) 538
BsuRI GGCC 6 cut(s) 332, 370, 1233, 1269, 1494, 1557
BtgI CCRYGG 3 cut(s) 333, 597, 1359
BtgZI GCGATG 1 cut(s) 181
BtsCI GGATG 8 cut(s) 102, 317, 579, 627, 989, 1558, 1719, 1844
BtsI GCAGTG 1 cut(s) 1667
BtsIMutI CAGTG 3 cut(s) 1667, 1742, 2083
Cac8I GCNNGC 3 cut(s) 279, 585, 730
CaiI CAGNNNCTG 1 cut(s) 692
CciI TCATGA 3 cut(s) 1501, 1645, 1768
CfoI GCGC 4 cut(s) 38, 271, 1334, 1879
Cfr13I GGNCC 5 cut(s) 330, 601, 1171, 1735, 1786
CseI GACGC 1 cut(s) 1658
CsiI ACCWGGT 1 cut(s) 1969
Csp6I GTAC 3 cut(s) 1403, 1409, 1945
CspCI CAANNNNNGTGG 2 cut(s) 434, 469
CviQI GTAC 3 cut(s) 1403, 1409, 1945
DdeI CTNAG 5 cut(s) 365, 639, 1116, 1158, 1335
DpnI GATC 6 cut(s) 155, 165, 1305, 1357, 1883, 1917
DpnII GATC 6 cut(s) 153, 163, 1303, 1355, 1881, 1915
EaeI YGGCCR 3 cut(s) 1231, 1492, 1555
Eam1104I CTCTTC 4 cut(s) 63, 771, 919, 977
EarI CTCTTC 4 cut(s) 63, 771, 919, 977
EciI GGCGGA 1 cut(s) 138
Eco130I CCWWGG 4 cut(s) 383, 597, 895, 1359
Eco47I GGWCC 4 cut(s) 601, 1171, 1735, 1786
Eco57I CTGAAG 4 cut(s) 44, 67, 771, 1766
EcoO109I RGGNCCY 1 cut(s) 1171
EcoRI GAATTC 2 cut(s) 781, 878
EcoRII CCWGG 9 cut(s) 219, 856, 1042, 1311, 1630, 1825, 1961, 1969, 1992
EcoT14I CCWWGG 4 cut(s) 383, 597, 895, 1359
EcoT22I ATGCAT 1 cut(s) 724
ErhI CCWWGG 4 cut(s) 383, 597, 895, 1359
FalI AAGNNNNNCTT 2 cut(s) 1773, 1805
FaqI GGGAC 3 cut(s) 1157, 1359, 1721
FbaI TGATCA 1 cut(s) 1881
Fnu4HI GCNGC 4 cut(s) 644, 962, 1234, 1267
FokI GGATG 8 cut(s) 109, 304, 586, 634, 976, 1565, 1726, 1831
Fsp4HI GCNGC 4 cut(s) 644, 962, 1234, 1267
FspBI CTAG 5 cut(s) 384, 756, 1301, 1350, 1482
GlaI GCGC 4 cut(s) 37, 270, 1333, 1878
GluI GCNGC 4 cut(s) 644, 962, 1234, 1267
GsuI CTGGAG 1 cut(s) 1848
HaeII RGCGCY 1 cut(s) 1335
HaeIII GGCC 6 cut(s) 332, 370, 1233, 1269, 1494, 1557
HapII CCGG 5 cut(s) 321, 348, 371, 993, 1938
HgaI GACGC 1 cut(s) 1658
HhaI GCGC 4 cut(s) 38, 271, 1334, 1879
Hin1I GRCGYC 1 cut(s) 1650
Hin6I GCGC 4 cut(s) 36, 269, 1332, 1877
HinP1I GCGC 4 cut(s) 36, 269, 1332, 1877
HindIII AAGCTT 2 cut(s) 362, 1247
HinfI GANTC 6 cut(s) 258, 434, 887, 1052, 1296, 2022
HpaII CCGG 5 cut(s) 321, 348, 371, 993, 1938
HphI GGTGA 9 cut(s) 83, 298, 485, 568, 1301, 1595, 1622, 1828, 1876
Hpy166II GTNNAC 3 cut(s) 250, 1403, 1945
Hpy188I TCNGA 4 cut(s) 86, 109, 790, 884
Hpy8I GTNNAC 3 cut(s) 250, 1403, 1945
Hpy99I CGWCG 6 cut(s) 113, 161, 179, 412, 855, 1678
HpyCH4III ACNGT 6 cut(s) 694, 745, 801, 848, 1095, 1345
HpyCH4IV ACGT 3 cut(s) 407, 1458, 1731
HpyCH4V TGCA 5 cut(s) 100, 583, 722, 950, 1639
HpyF10VI GCNNNNNNNGC 2 cut(s) 719, 1106
HpyF3I CTNAG 5 cut(s) 365, 639, 1116, 1158, 1335
HpySE526I ACGT 3 cut(s) 407, 1458, 1731
Hsp92I GRCGYC 1 cut(s) 1650
HspAI GCGC 4 cut(s) 36, 269, 1332, 1877
KflI GGGWCCC 1 cut(s) 1171
Kpn2I TCCGGA 1 cut(s) 992
Ksp22I TGATCA 1 cut(s) 1881
Kzo9I GATC 6 cut(s) 153, 163, 1303, 1355, 1881, 1915
LmnI GCTCC 1 cut(s) 229
Lsp1109I GCAGC 1 cut(s) 655
LweI GCATC 5 cut(s) 87, 199, 321, 781, 1573
MabI ACCWGGT 1 cut(s) 1969
MaeI CTAG 5 cut(s) 384, 756, 1301, 1350, 1482
MaeII ACGT 3 cut(s) 407, 1458, 1731
MaeIII GTNAC 6 cut(s) 403, 1615, 1727, 1840, 1927, 2032
MalI GATC 6 cut(s) 155, 165, 1305, 1357, 1883, 1917
MboI GATC 6 cut(s) 153, 163, 1303, 1355, 1881, 1915
MflI RGATCY 1 cut(s) 1355
MlsI TGGCCA 1 cut(s) 1557
MluCI AATT 8 cut(s) 21, 523, 615, 655, 781, 804, 878, 1065
MluNI TGGCCA 1 cut(s) 1557
MlyI GAGTC 2 cut(s) 1046, 1305
MmeI TCCRAC 5 cut(s) 132, 462, 921, 1489, 1497
Mox20I TGGCCA 1 cut(s) 1557
Mph1103I ATGCAT 1 cut(s) 724
MroI TCCGGA 1 cut(s) 992
MroXI GAANNNNTTC 3 cut(s) 1215, 1368, 1751
MscI TGGCCA 1 cut(s) 1557
MseI TTAA 5 cut(s) 659, 803, 1005, 1425, 1455
MslI CAYNNNNRTG 6 cut(s) 69, 1278, 1364, 1584, 1644, 2030
Msp20I TGGCCA 1 cut(s) 1557
MspI CCGG 5 cut(s) 321, 348, 371, 993, 1938
MvaI CCWGG 9 cut(s) 221, 858, 1044, 1313, 1632, 1827, 1963, 1971, 1994
MvnI CGCG 3 cut(s) 269, 271, 1877
MwoI GCNNNNNNNGC 2 cut(s) 719, 1106
NciI CCSGG 3 cut(s) 349, 372, 1939
NcoI CCATGG 2 cut(s) 597, 1359
NdeII GATC 6 cut(s) 153, 163, 1303, 1355, 1881, 1915
NlaIV GGNNCC 6 cut(s) 231, 603, 1172, 1173, 1357, 1737
NmuCI GTSAC 2 cut(s) 1927, 2032
NsiI ATGCAT 1 cut(s) 724
NspV TTCGAA 1 cut(s) 129
OliI CACNNNNGTG 1 cut(s) 69
PagI TCATGA 3 cut(s) 1501, 1645, 1768
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PdmI GAANNNNTTC 3 cut(s) 1215, 1368, 1751
PfeI GAWTC 4 cut(s) 258, 434, 887, 2022
Pfl23II CGTACG 1 cut(s) 1408
PflMI CCANNNNNTGG 1 cut(s) 226
PfoI TCCNGGA 2 cut(s) 1042, 1825
PkrI GCNGC 4 cut(s) 645, 963, 1235, 1268
Ple19I CGATCG 1 cut(s) 156
PleI GAGTC 2 cut(s) 1046, 1304
PpsI GAGTC 2 cut(s) 1046, 1304
PpuMI RGGWCCY 1 cut(s) 1171
Psp5II RGGWCCY 1 cut(s) 1171
Psp6I CCWGG 9 cut(s) 219, 856, 1042, 1311, 1630, 1825, 1961, 1969, 1992
PspGI CCWGG 9 cut(s) 219, 856, 1042, 1311, 1630, 1825, 1961, 1969, 1992
PspLI CGTACG 1 cut(s) 1408
PspN4I GGNNCC 6 cut(s) 231, 603, 1172, 1173, 1357, 1737
PspPI GGNCC 5 cut(s) 330, 601, 1171, 1735, 1786
PspPPI RGGWCCY 1 cut(s) 1171
PstNI CAGNNNCTG 1 cut(s) 692
PsuI RGATCY 1 cut(s) 1355
PvuI CGATCG 1 cut(s) 156
RsaI GTAC 3 cut(s) 1404, 1410, 1946
RsaNI GTAC 3 cut(s) 1403, 1409, 1945
RseI CAYNNNNRTG 6 cut(s) 69, 1278, 1364, 1584, 1644, 2030
SaqAI TTAA 5 cut(s) 659, 803, 1005, 1425, 1455
SatI GCNGC 4 cut(s) 644, 962, 1234, 1267
Sau3AI GATC 6 cut(s) 153, 163, 1303, 1355, 1881, 1915
Sau96I GGNCC 5 cut(s) 330, 601, 1171, 1735, 1786
SchI GAGTC 2 cut(s) 1046, 1305
SexAI ACCWGGT 1 cut(s) 1969
SfaNI GCATC 5 cut(s) 87, 199, 321, 781, 1573
SfcI CTRYAG 1 cut(s) 1317
SfuI TTCGAA 1 cut(s) 129
SinI GGWCC 4 cut(s) 601, 1171, 1735, 1786
SmiMI CAYNNNNRTG 6 cut(s) 69, 1278, 1364, 1584, 1644, 2030
Sse9I AATT 8 cut(s) 21, 523, 615, 655, 781, 804, 878, 1065
SsiI CCGC 8 cut(s) 139, 149, 281, 310, 961, 1234, 1266, 1865
SspI AATATT 2 cut(s) 772, 1478
SspMI CTAG 5 cut(s) 384, 756, 1301, 1350, 1482
StyI CCWWGG 4 cut(s) 383, 597, 895, 1359
TaaI ACNGT 6 cut(s) 694, 745, 801, 848, 1095, 1345
TaiI ACGT 3 cut(s) 410, 1461, 1734
TaqI TCGA 2 cut(s) 129, 462
TasI AATT 8 cut(s) 21, 523, 615, 655, 781, 804, 878, 1065
TauI GCSGC 3 cut(s) 964, 1236, 1269
TfiI GAWTC 4 cut(s) 258, 434, 887, 2022
Tru1I TTAA 5 cut(s) 659, 803, 1005, 1425, 1455
Tru9I TTAA 5 cut(s) 659, 803, 1005, 1425, 1455
TscAI CASTG 2 cut(s) 1667, 1749
TseFI GTSAC 2 cut(s) 1927, 2032
TseI GCWGC 1 cut(s) 643
Tsp45I GTSAC 2 cut(s) 1927, 2032
TspDTI ATGAA 7 cut(s) 857, 882, 1241, 1262, 1611, 1757, 2064
TspGWI ACGGA 1 cut(s) 1733
TspRI CASTG 2 cut(s) 1667, 1749
Van91I CCANNNNNTGG 1 cut(s) 226
VpaK11BI GGWCC 4 cut(s) 601, 1171, 1735, 1786
XapI RAATTY 4 cut(s) 655, 781, 878, 1065
XbaI TCTAGA 1 cut(s) 1481
XmaJI CCTAGG 1 cut(s) 383
XmnI GAANNNNTTC 3 cut(s) 1215, 1368, 1751
XspI CTAG 5 cut(s) 384, 756, 1301, 1350, 1482
Zsp2I ATGCAT 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.