Rh2DG141400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0011838
Physical Location & Seq
Forward (+)
11852738 .. 11859478
6741 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG141400.1

Sequence Viewer

Length: 1989 bp
ATGCACCTCACCGATGACTACCCCATCAAGTACGAAGCCGACCGCCTCCCCCCGCCGATCGTCGCCGATCTCAACGGCGACGGCAAGAAAGAAGTCCTCGTCGCCACACACGACGCCAAAATCCAGATTCTGGAGCCTCATAGTAGGCGTGTGGATGAGGGATTCAGTAGTGCTCGTGTTCTTGCTGAGGTCAGCCTTTTGCCAGATAAAATCCGAATTTCCTCCGGCAGGCGTGCGGTGGCGATGGCCACCGGAGTTATAGAGAAAGTGAGGCCAGGGCAGATAGCCAGGCAGGTTTTGGTGGTTGTTACGTCGGGCTGGTCTGTAATGTGCTTCGATTCTAATCTCAAAAGGCTGTGGGATGTTAATTTGCAGGAGGATTTTCCGCATAATGCTCACCATAGGGAGATTGCCATTTCGATAACCAATTACACTCTGAAGCATGGGGATTCTGGATTGGTGATTGTTGGCGGAAGGATGGAAATGCAGCCTCATATTTCCTTAGATCCCTTTGAAGAAATTGGGATGGCAGAGAAAAGTGCTGACCAGCATAGAAGAAATCTAACTGAAAAGGAGGCATCTGAAAATTCAGGAACTGTGGATTTACGCCATTTTGCACTATATGCTTTTGCCGGTGGTTCTGGCAAAATTAGATGGACTAGAAAGAATGAGAATATTGAAGCACATTCTTCAGATGCATCACAGTTGATTCCGCAGCACAACTACAAACTTGATGTTCAGGCTTTGAACAGTCGTCATCCAGGAGAATTTGCATGTAGGGAATTCAGAGAATCAATCCTCGGAGTTATGCCACATCATTGGGATAGAAGAGAAGATACTTTGTTGAAACTTGCACACTTTCGGAGGCACAAAAGGAAAACATTGAAGAAATCAGCTGGAAAGAGTATCAACTACCCTTTCCATAAGCCTGAAGAAAATCATCCTCCTGGAAAGGACTCGACAAAAAAGATTTCAAACATAATTGGAAAAGCTGCCCAGTACGCTGGTTCAGCAAAATCCAAGAAGCCACATCCATACATCCCTACCATCACAAATCACACTCAACTTTGGTGGGTCCCTAATGTGGTTGTGGCTCATCAAAAAGAAGGAATAGAAGCTGTTCACTTAGCATCTGGTCGCACTCTTTGCAAGCTTAATCTTCAAGAAGCTGGTCTTCATGCAGATGTAAATGGTGATGGAGTTCTAGATCATGTCCAGGCTGTTGGTGGAAATGGCGCTGAGCAGACTGTTGTTAGTGGATCCATGGAAGTGCTACGTCCTTGTTGGGCTGTTGCAACCTCTGGTGTACCTGTGCGAGAGCAACTATTTAATGCTTCTATATGTCATCATTCAGTTTTTAACTTATTCCAACATGGAGATTATTCTAGAAGCTATGGTCGAGCTCCTGATTTGGCTTCATTGGAAGTAGCAACGCCAATTCTCATCCCAAGAAATGATGGCCATAGGCACCGCAAGGGAAGCCATGGTGATGTTGTCTTTTTGACAAATCGTGGTGAGGTAACATCCTACTCACCTGGCTTGCACGGGCACGGTGCTGTTTGGAATTGGCATCTGTTAACGGGTGCTACATGGTCAAATCTTCCATCTCCAGCGGGGATGATGGAAGCTGCTGTGGTGGTCCCTACACTGAAGGCATTCTCCTTGCGTGTCCATGACAATCAGGAAGTGATCCTTGCAGCTGGAGAGCAAGAGGCTATCTTGATATCACCTGGAGGAAGTATTTTAACCTCCCTTGAGCTTCCAGCACCACCTACCCATGCCCTGATTGCTGAGGACTTCTCAAACGACGGGCTCACTGACCTTATTCTCGTGACCTCAACTGGGGTGTATGGTTTTGTTCAGACCAGGCAACCAGGGGCCCTCTTTTTTAGCATACTAGTTGGTGTCCTCATACTTGTGATGGGAGTCATATTTGTCACCCAACACCTGAACTCCATAAAGGGCAAACCTCGTCCATCTGGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

662

Amino Acids

72.78

Weight (kDa)

8.41

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011838)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51050
fragaria_vesca FvH4_1g12400 FvH4_1g12400
malus_domestica MD02G1137100.v1.1 MD15G1250800.v1.1
prunus_persica Prupe.7G163500_v2.0.a1 Prupe.7G163500_v2.0.a1
pyrus_communis pycom02g10850 pycom15g22120
rosa_chinensis RchiOBHm_Chr2g0100261
rosa_laevigata RLG00000016950
rosa_multiflora Rmu_sc0002547.1_g000015
rosa_roxburghii Rroxscaffold_2G00142440
rosa_rugosa Rorug02G0086900
rosa_samantha Rh2AG135900 Rh2BG139400 Rh2CG141200 Rh2DG141400
rosa_wichuraiana Rw2G010630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 283
AccB1I GGYRCC 1 cut(s) 1467
AccB7I CCANNNNNTGG 1 cut(s) 130
AciI CCGC 8 cut(s) 43, 53, 236, 386, 471, 713, 1471, 1613
AclWI GGATC 4 cut(s) 500, 1254, 1267, 1684
AcoI YGGCCR 2 cut(s) 246, 1459
AcsI RAATTY 4 cut(s) 216, 586, 767, 782
AcuI CTGAAG 4 cut(s) 458, 675, 951, 1670
AcyI GRCGYC 1 cut(s) 114
AfaI GTAC 3 cut(s) 32, 1001, 1308
AfiI CCNNNNNNNGG 4 cut(s) 130, 228, 1084, 1842
AgsI TTSAA 7 cut(s) 515, 680, 748, 847, 886, 975, 1163
AhlI ACTAGT 1 cut(s) 1897
AjnI CCWGG 9 cut(s) 274, 287, 760, 946, 1215, 1534, 1729, 1865, 1873
Alw21I GWGCWC 2 cut(s) 175, 1405
AlwI GGATC 4 cut(s) 500, 1254, 1267, 1684
AlwNI CAGNNNCTG 2 cut(s) 130, 596
AoxI GGCC 4 cut(s) 246, 272, 1459, 1878
ApaI GGGCCC 1 cut(s) 1882
ApeKI GCWGC 5 cut(s) 487, 715, 992, 1628, 1697
ApoI RAATTY 4 cut(s) 216, 586, 767, 782
Asp700I GAANNNNTTC 2 cut(s) 1119, 1655
AspLEI GCGC 1 cut(s) 1238
AspS9I GGNCC 4 cut(s) 1075, 1639, 1878, 1879
AsuHPI GGTGA 8 cut(s) 389, 472, 1205, 1499, 1524, 1526, 1719, 1930
AvaII GGWCC 2 cut(s) 1075, 1639
BaeGI GKGCMC 2 cut(s) 1551, 1882
BalI TGGCCA 2 cut(s) 248, 1461
BamHI GGATCC 1 cut(s) 1259
BanI GGYRCC 1 cut(s) 1467
BanII GRGCYC 3 cut(s) 1405, 1815, 1882
BarI GAAGNNNNNNTAC 2 cut(s) 820, 852
BauI CACGAG 2 cut(s) 174, 1829
BbsI GAAGAC 1 cut(s) 1166
Bbv12I GWGCWC 2 cut(s) 175, 1405
BbvCI CCTCAGC 2 cut(s) 186, 1791
BbvI GCAGC 5 cut(s) 499, 727, 979, 1615, 1709
BceAI ACGGC 2 cut(s) 91, 97
BciT130I CCWGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
BcuI ACTAGT 1 cut(s) 1897
BfaI CTAG 4 cut(s) 660, 1205, 1386, 1898
BfoI RGCGCY 1 cut(s) 1239
BfuAI ACCTGC 1 cut(s) 283
BisI GCNGC 5 cut(s) 488, 716, 993, 1629, 1698
BlpI GCTNAGC 1 cut(s) 1239
BlsI GCNGC 5 cut(s) 489, 717, 994, 1630, 1699
Bme1390I CCNGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
Bme18I GGWCC 2 cut(s) 1075, 1639
BmgT120I GGNCC 4 cut(s) 1075, 1639, 1878, 1879
BmiI GGNNCC 8 cut(s) 135, 1076, 1077, 1261, 1469, 1641, 1879, 1880
BmrFI CCNGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
BmrI ACTGGG 2 cut(s) 991, 1851
BmsI GCATC 5 cut(s) 587, 685, 707, 1139, 1579
BmuI ACTGGG 2 cut(s) 991, 1851
BpiI GAAGAC 1 cut(s) 1166
BplI GAGNNNNNCTC 2 cut(s) 1784, 1816
BpmI CTGGAG 4 cut(s) 152, 1593, 1722, 1752
Bpu10I CCTNAGC 2 cut(s) 186, 1791
Bpu1102I GCTNAGC 1 cut(s) 1239
BpuEI CTTGAG 1 cut(s) 1775
BsaBI GATNNNNATC 1 cut(s) 342
BsaHI GRCGYC 1 cut(s) 114
BsaJI CCNNGG 5 cut(s) 275, 799, 1263, 1483, 1874
BsaWI WCCGGW 1 cut(s) 251
BsaXI ACNNNNNCTCC 2 cut(s) 1937, 1967
Bsc4I CCNNNNNNNGG 4 cut(s) 130, 228, 1084, 1842
Bse118I RCCGGY 1 cut(s) 632
Bse1I ACTGG 2 cut(s) 997, 1846
Bse8I GATNNNNATC 1 cut(s) 342
BseBI CCWGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
BseDI CCNNGG 5 cut(s) 275, 799, 1263, 1483, 1874
BseJI GATNNNNATC 1 cut(s) 342
BseLI CCNNNNNNNGG 4 cut(s) 130, 228, 1084, 1842
BseMII CTCAG 3 cut(s) 177, 1230, 1782
BseNI ACTGG 2 cut(s) 997, 1846
BseSI GKGCMC 2 cut(s) 1551, 1882
BseXI GCAGC 5 cut(s) 499, 727, 979, 1615, 1709
Bsh1285I CGRYCG 2 cut(s) 43, 60
BshFI GGCC 4 cut(s) 248, 274, 1461, 1880
BshNI GGYRCC 1 cut(s) 1467
BsiEI CGRYCG 2 cut(s) 43, 60
BsiHKAI GWGCWC 2 cut(s) 175, 1405
BsiSI CCGG 3 cut(s) 225, 252, 633
BslFI GGGAC 2 cut(s) 1061, 1625
BslI CCNNNNNNNGG 4 cut(s) 130, 228, 1084, 1842
BsmFI GGGAC 2 cut(s) 1061, 1625
BsmI GAATGC 1 cut(s) 1655
BsnI GGCC 4 cut(s) 248, 274, 1461, 1880
Bsp120I GGGCCC 1 cut(s) 1878
Bsp1286I GDGCHC 5 cut(s) 175, 1405, 1551, 1815, 1882
Bsp143I GATC 6 cut(s) 57, 67, 505, 1207, 1259, 1689
Bsp1720I GCTNAGC 1 cut(s) 1239
Bsp19I CCATGG 2 cut(s) 1263, 1483
BspACI CCGC 8 cut(s) 43, 53, 236, 386, 471, 713, 1471, 1613
BspANI GGCC 4 cut(s) 248, 274, 1461, 1880
BspCNI CTCAG 3 cut(s) 178, 1231, 1783
BspLI GGNNCC 8 cut(s) 135, 1076, 1077, 1261, 1469, 1641, 1879, 1880
BspMI ACCTGC 1 cut(s) 283
BspPI GGATC 4 cut(s) 500, 1254, 1267, 1684
BspT107I GGYRCC 1 cut(s) 1467
BsrFI RCCGGY 1 cut(s) 632
BsrI ACTGG 2 cut(s) 997, 1846
BssAI RCCGGY 1 cut(s) 632
BssECI CCNNGG 5 cut(s) 275, 799, 1263, 1483, 1874
BssMI GATC 6 cut(s) 57, 67, 505, 1207, 1259, 1689
BssNI GRCGYC 1 cut(s) 114
BssSI CACGAG 2 cut(s) 174, 1829
BssT1I CCWWGG 2 cut(s) 1263, 1483
Bst2BI CACGAG 2 cut(s) 174, 1829
Bst2UI CCWGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
Bst4CI ACNGT 5 cut(s) 598, 705, 752, 1249, 1553
Bst6I CTCTTC 1 cut(s) 823
BstACI GRCGYC 1 cut(s) 114
BstAPI GCANNNNNTGC 2 cut(s) 623, 1146
BstC8I GCNNGC 4 cut(s) 230, 234, 1151, 1541
BstDEI CTNAG 5 cut(s) 186, 502, 1126, 1239, 1791
BstDSI CCRYGG 2 cut(s) 1263, 1483
BstENI CCTNNNNNAGG 1 cut(s) 226
BstH2I RGCGCY 1 cut(s) 1239
BstHHI GCGC 1 cut(s) 1238
BstKTI GATC 6 cut(s) 60, 70, 508, 1210, 1262, 1692
BstMBI GATC 6 cut(s) 57, 67, 505, 1207, 1259, 1689
BstMCI CGRYCG 2 cut(s) 43, 60
BstMWI GCNNNNNNNGC 6 cut(s) 623, 1001, 1010, 1146, 1479, 1787
BstNI CCWGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
BstNSI RCATGY 1 cut(s) 777
BstSCI CCNGG 9 cut(s) 274, 287, 760, 946, 1215, 1534, 1729, 1865, 1873
BstSLI GKGCMC 2 cut(s) 1551, 1882
BstV1I GCAGC 5 cut(s) 499, 727, 979, 1615, 1709
BstV2I GAAGAC 1 cut(s) 1166
BstX2I RGATCY 2 cut(s) 505, 1259
BstXI CCANNNNNNTGG 3 cut(s) 819, 1004, 1223
BstYI RGATCY 2 cut(s) 505, 1259
BsuRI GGCC 4 cut(s) 248, 274, 1461, 1880
BtgI CCRYGG 2 cut(s) 1263, 1483
BtgZI GCGATG 1 cut(s) 257
BtsIMutI CAGTG 2 cut(s) 1646, 1815
BveI ACCTGC 1 cut(s) 283
Cac8I GCNNGC 4 cut(s) 230, 234, 1151, 1541
CaiI CAGNNNCTG 2 cut(s) 130, 596
CfoI GCGC 1 cut(s) 1238
Cfr10I RCCGGY 1 cut(s) 632
Cfr13I GGNCC 4 cut(s) 1075, 1639, 1878, 1879
CseI GACGC 1 cut(s) 122
Csp6I GTAC 3 cut(s) 31, 1000, 1307
CspCI CAANNNNNGTGG 2 cut(s) 1052, 1087
CviQI GTAC 3 cut(s) 31, 1000, 1307
DdeI CTNAG 5 cut(s) 186, 502, 1126, 1239, 1791
DpnI GATC 6 cut(s) 59, 69, 507, 1209, 1261, 1691
DpnII GATC 6 cut(s) 57, 67, 505, 1207, 1259, 1689
EaeI YGGCCR 2 cut(s) 246, 1459
Eam1104I CTCTTC 1 cut(s) 823
EarI CTCTTC 1 cut(s) 823
EciI GGCGGA 1 cut(s) 486
Ecl136II GAGCTC 1 cut(s) 1403
Eco130I CCWWGG 2 cut(s) 1263, 1483
Eco24I GRGCYC 3 cut(s) 1405, 1815, 1882
Eco32I GATATC 1 cut(s) 1725
Eco47I GGWCC 2 cut(s) 1075, 1639
Eco53kI GAGCTC 1 cut(s) 1403
Eco57I CTGAAG 4 cut(s) 458, 675, 951, 1670
EcoICRI GAGCTC 1 cut(s) 1403
EcoNI CCTNNNNNAGG 1 cut(s) 226
EcoO109I RGGNCCY 3 cut(s) 1075, 1878, 1879
EcoRI GAATTC 1 cut(s) 782
EcoRII CCWGG 9 cut(s) 274, 287, 760, 946, 1215, 1534, 1729, 1865, 1873
EcoRV GATATC 1 cut(s) 1725
EcoT14I CCWWGG 2 cut(s) 1263, 1483
EcoT22I ATGCAT 1 cut(s) 700
EcoT38I GRGCYC 3 cut(s) 1405, 1815, 1882
ErhI CCWWGG 2 cut(s) 1263, 1483
FalI AAGNNNNNCTT 4 cut(s) 1158, 1190, 1677, 1709
FaqI GGGAC 2 cut(s) 1061, 1625
FauI CCCGC 2 cut(s) 60, 1606
Fnu4HI GCNGC 5 cut(s) 488, 716, 993, 1629, 1698
FriOI GRGCYC 3 cut(s) 1405, 1815, 1882
Fsp4HI GCNGC 5 cut(s) 488, 716, 993, 1629, 1698
FspBI CTAG 4 cut(s) 660, 1205, 1386, 1898
GlaI GCGC 1 cut(s) 1237
GluI GCNGC 5 cut(s) 488, 716, 993, 1629, 1698
GsuI CTGGAG 4 cut(s) 152, 1593, 1722, 1752
HaeII RGCGCY 1 cut(s) 1239
HaeIII GGCC 4 cut(s) 248, 274, 1461, 1880
HapII CCGG 3 cut(s) 225, 252, 633
HgaI GACGC 1 cut(s) 122
HhaI GCGC 1 cut(s) 1238
Hin1I GRCGYC 1 cut(s) 114
Hin6I GCGC 1 cut(s) 1236
HinP1I GCGC 1 cut(s) 1236
HincII GTYRAC 1 cut(s) 1578
HindII GTYRAC 1 cut(s) 1578
HindIII AAGCTT 1 cut(s) 1151
HinfI GANTC 8 cut(s) 127, 162, 338, 449, 709, 791, 956, 1926
HpaI GTTAAC 1 cut(s) 1578
HpaII CCGG 3 cut(s) 225, 252, 633
HphI GGTGA 8 cut(s) 389, 472, 1205, 1499, 1524, 1526, 1719, 1930
Hpy166II GTNNAC 3 cut(s) 1123, 1307, 1578
Hpy188I TCNGA 8 cut(s) 215, 438, 583, 694, 788, 803, 864, 1863
Hpy8I GTNNAC 3 cut(s) 1123, 1307, 1578
Hpy99I CGWCG 6 cut(s) 65, 83, 104, 116, 316, 1811
HpyAV CCTTC 3 cut(s) 468, 1100, 1645
HpyCH4III ACNGT 5 cut(s) 598, 705, 752, 1249, 1553
HpyCH4IV ACGT 2 cut(s) 311, 1276
HpyF10VI GCNNNNNNNGC 6 cut(s) 623, 1001, 1010, 1146, 1479, 1787
HpyF3I CTNAG 5 cut(s) 186, 502, 1126, 1239, 1791
HpySE526I ACGT 2 cut(s) 311, 1276
Hsp92I GRCGYC 1 cut(s) 114
HspAI GCGC 1 cut(s) 1236
KflI GGGWCCC 1 cut(s) 1075
KspAI GTTAAC 1 cut(s) 1578
Kzo9I GATC 6 cut(s) 57, 67, 505, 1207, 1259, 1689
LmnI GCTCC 2 cut(s) 133, 1408
Lsp1109I GCAGC 5 cut(s) 499, 727, 979, 1615, 1709
LweI GCATC 5 cut(s) 587, 685, 707, 1139, 1579
MaeI CTAG 4 cut(s) 660, 1205, 1386, 1898
MaeII ACGT 2 cut(s) 311, 1276
MaeIII GTNAC 4 cut(s) 307, 1519, 1831, 1936
MalI GATC 6 cut(s) 59, 69, 507, 1209, 1261, 1691
MboI GATC 6 cut(s) 57, 67, 505, 1207, 1259, 1689
MflI RGATCY 2 cut(s) 505, 1259
MhlI GDGCHC 5 cut(s) 175, 1405, 1551, 1815, 1882
MlsI TGGCCA 2 cut(s) 248, 1461
MluNI TGGCCA 2 cut(s) 248, 1461
MlyI GAGTC 2 cut(s) 950, 1935
MmeI TCCRAC 1 cut(s) 1393
Mox20I TGGCCA 2 cut(s) 248, 1461
Mph1103I ATGCAT 1 cut(s) 700
MroXI GAANNNNTTC 2 cut(s) 1119, 1655
MscI TGGCCA 2 cut(s) 248, 1461
MseI TTAA 6 cut(s) 366, 1155, 1329, 1359, 1577, 1745
MslI CAYNNNNRTG 4 cut(s) 1182, 1268, 1488, 1916
Msp20I TGGCCA 2 cut(s) 248, 1461
MspA1I CMGCKG 3 cut(s) 896, 1613, 1700
MspI CCGG 3 cut(s) 225, 252, 633
MspR9I CCNGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
Mva1269I GAATGC 1 cut(s) 1655
MvaI CCWGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
MwoI GCNNNNNNNGC 6 cut(s) 623, 1001, 1010, 1146, 1479, 1787
NcoI CCATGG 2 cut(s) 1263, 1483
NdeII GATC 6 cut(s) 57, 67, 505, 1207, 1259, 1689
NlaIV GGNNCC 8 cut(s) 135, 1076, 1077, 1261, 1469, 1641, 1879, 1880
NmuCI GTSAC 2 cut(s) 1831, 1936
NsiI ATGCAT 1 cut(s) 700
NspI RCATGY 1 cut(s) 777
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PctI GAATGC 1 cut(s) 1655
PdmI GAANNNNTTC 2 cut(s) 1119, 1655
PfeI GAWTC 6 cut(s) 127, 162, 338, 449, 709, 791
PflMI CCANNNNNTGG 1 cut(s) 130
PfoI TCCNGGA 2 cut(s) 760, 946
PkrI GCNGC 5 cut(s) 489, 717, 994, 1630, 1699
Ple19I CGATCG 1 cut(s) 60
PleI GAGTC 2 cut(s) 950, 1934
PpsI GAGTC 2 cut(s) 950, 1934
PpuMI RGGWCCY 1 cut(s) 1075
Psp124BI GAGCTC 1 cut(s) 1405
Psp5II RGGWCCY 1 cut(s) 1075
Psp6I CCWGG 9 cut(s) 274, 287, 760, 946, 1215, 1534, 1729, 1865, 1873
PspGI CCWGG 9 cut(s) 274, 287, 760, 946, 1215, 1534, 1729, 1865, 1873
PspN4I GGNNCC 8 cut(s) 135, 1076, 1077, 1261, 1469, 1641, 1879, 1880
PspOMI GGGCCC 1 cut(s) 1878
PspPI GGNCC 4 cut(s) 1075, 1639, 1878, 1879
PspPPI RGGWCCY 1 cut(s) 1075
PstNI CAGNNNCTG 2 cut(s) 130, 596
PsuI RGATCY 2 cut(s) 505, 1259
PvuI CGATCG 1 cut(s) 60
PvuII CAGCTG 2 cut(s) 896, 1700
RsaI GTAC 3 cut(s) 32, 1001, 1308
RsaNI GTAC 3 cut(s) 31, 1000, 1307
RseI CAYNNNNRTG 4 cut(s) 1182, 1268, 1488, 1916
SacI GAGCTC 1 cut(s) 1405
SaqAI TTAA 6 cut(s) 366, 1155, 1329, 1359, 1577, 1745
SatI GCNGC 5 cut(s) 488, 716, 993, 1629, 1698
Sau3AI GATC 6 cut(s) 57, 67, 505, 1207, 1259, 1689
Sau96I GGNCC 4 cut(s) 1075, 1639, 1878, 1879
SchI GAGTC 2 cut(s) 950, 1935
ScrFI CCNGG 9 cut(s) 276, 289, 762, 948, 1217, 1536, 1731, 1867, 1875
SduI GDGCHC 5 cut(s) 175, 1405, 1551, 1815, 1882
SfaNI GCATC 5 cut(s) 587, 685, 707, 1139, 1579
SinI GGWCC 2 cut(s) 1075, 1639
SmiMI CAYNNNNRTG 4 cut(s) 1182, 1268, 1488, 1916
SmlI CTYRAG 1 cut(s) 1754
SmoI CTYRAG 1 cut(s) 1754
SpeI ACTAGT 1 cut(s) 1897
SsiI CCGC 8 cut(s) 43, 53, 236, 386, 471, 713, 1471, 1613
SspI AATATT 1 cut(s) 676
SspMI CTAG 4 cut(s) 660, 1205, 1386, 1898
SstI GAGCTC 1 cut(s) 1405
StyD4I CCNGG 9 cut(s) 274, 287, 760, 946, 1215, 1534, 1729, 1865, 1873
StyI CCWWGG 2 cut(s) 1263, 1483
TaaI ACNGT 5 cut(s) 598, 705, 752, 1249, 1553
TaiI ACGT 2 cut(s) 314, 1279
TaqI TCGA 4 cut(s) 336, 419, 959, 1399
TfiI GAWTC 6 cut(s) 127, 162, 338, 449, 709, 791
Tru1I TTAA 6 cut(s) 366, 1155, 1329, 1359, 1577, 1745
Tru9I TTAA 6 cut(s) 366, 1155, 1329, 1359, 1577, 1745
TscAI CASTG 2 cut(s) 1653, 1822
TseFI GTSAC 2 cut(s) 1831, 1936
TseI GCWGC 5 cut(s) 487, 715, 992, 1628, 1697
Tsp45I GTSAC 2 cut(s) 1831, 1936
TspDTI ATGAA 2 cut(s) 1166, 1407
TspRI CASTG 2 cut(s) 1653, 1822
Van91I CCANNNNNTGG 1 cut(s) 130
VpaK11BI GGWCC 2 cut(s) 1075, 1639
XagI CCTNNNNNAGG 1 cut(s) 226
XapI RAATTY 4 cut(s) 216, 586, 767, 782
XbaI TCTAGA 2 cut(s) 1204, 1385
XceI RCATGY 1 cut(s) 777
XcmI CCANNNNNNNNNTGG 2 cut(s) 295, 1223
XmnI GAANNNNTTC 2 cut(s) 1119, 1655
XspI CTAG 4 cut(s) 660, 1205, 1386, 1898
Zsp2I ATGCAT 1 cut(s) 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.