RIBOSOMAL protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G36420 |
| fragaria_vesca | FvH4_1g12480 FvH4_1g12480 |
| malus_domestica | MD02G1138800.v1.1 MD02G1139200.v1.1 MD15G1252100.v1.1 |
| prunus_persica | Prupe.7G162000_v2.0.a1 Prupe.8G072700_v2.0.a1 Prupe.8G072700_v2.0.a1 Prupe.8G072700_v2.0.a1 Prupe.8G072700_v2.0.a1 Prupe.8G072700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0100351 |
| rosa_laevigata | RLG00000016968 |
| rosa_multiflora | Rmu_sc0004164.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00142300 |
| rosa_rugosa | Rorug02G0087800 |
| rosa_samantha | Rh2CG142300 |
| rosa_wichuraiana | Rw2G010720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 472 |
| AccII | CGCG | 3 cut(s) | 125, 170, 320 |
| AcyI | GRCGYC | 1 cut(s) | 473 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 217, 281 |
| AgsI | TTSAA | 3 cut(s) | 370, 445, 487 |
| AluBI | AGCT | 2 cut(s) | 235, 373 |
| AluI | AGCT | 2 cut(s) | 235, 373 |
| Alw26I | GTCTC | 3 cut(s) | 130, 163, 184 |
| Ama87I | CYCGRG | 1 cut(s) | 181 |
| AoxI | GGCC | 1 cut(s) | 510 |
| AsiSI | GCGATCGC | 1 cut(s) | 168 |
| AspLEI | GCGC | 3 cut(s) | 127, 320, 475 |
| AspS9I | GGNCC | 1 cut(s) | 208 |
| AsuC2I | CCSGG | 3 cut(s) | 276, 299, 307 |
| AsuHPI | GGTGA | 3 cut(s) | 274, 418, 430 |
| AvaI | CYCGRG | 1 cut(s) | 181 |
| AvaII | GGWCC | 1 cut(s) | 208 |
| BanI | GGYRCC | 1 cut(s) | 472 |
| BanII | GRGCYC | 1 cut(s) | 297 |
| BbsI | GAAGAC | 1 cut(s) | 359 |
| BccI | CCATC | 4 cut(s) | 93, 253, 274, 553 |
| BceAI | ACGGC | 2 cut(s) | 372, 447 |
| BcnI | CCSGG | 3 cut(s) | 276, 299, 307 |
| BcoDI | GTCTC | 3 cut(s) | 130, 163, 184 |
| BfoI | RGCGCY | 1 cut(s) | 476 |
| BglII | AGATCT | 1 cut(s) | 201 |
| BisI | GCNGC | 7 cut(s) | 123, 128, 316, 321, 324, 390, 393 |
| BlsI | GCNGC | 7 cut(s) | 124, 129, 317, 322, 325, 391, 394 |
| Bme1390I | CCNGG | 3 cut(s) | 276, 299, 307 |
| Bme18I | GGWCC | 1 cut(s) | 208 |
| BmeT110I | CYCGRG | 1 cut(s) | 181 |
| BmgT120I | GGNCC | 1 cut(s) | 208 |
| BmiI | GGNNCC | 3 cut(s) | 296, 304, 474 |
| BmrFI | CCNGG | 3 cut(s) | 276, 299, 307 |
| BmsI | GCATC | 3 cut(s) | 240, 261, 376 |
| BpiI | GAAGAC | 1 cut(s) | 359 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 143, 175 |
| BpmI | CTGGAG | 1 cut(s) | 218 |
| Bpu10I | CCTNAGC | 1 cut(s) | 453 |
| BpuMI | CCSGG | 3 cut(s) | 276, 299, 307 |
| BsaBI | GATNNNNATC | 1 cut(s) | 284 |
| BsaHI | GRCGYC | 1 cut(s) | 473 |
| BsaI | GGTCTC | 2 cut(s) | 130, 184 |
| BsaJI | CCNNGG | 2 cut(s) | 275, 298 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 500, 530 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 217, 281 |
| Bse8I | GATNNNNATC | 1 cut(s) | 284 |
| BseDI | CCNNGG | 2 cut(s) | 275, 298 |
| BseGI | GGATG | 1 cut(s) | 285 |
| BseJI | GATNNNNATC | 1 cut(s) | 284 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 217, 281 |
| BseMII | CTCAG | 1 cut(s) | 215 |
| BseRI | GAGGAG | 2 cut(s) | 353, 521 |
| BseYI | CCCAGC | 1 cut(s) | 235 |
| Bsh1236I | CGCG | 3 cut(s) | 125, 170, 320 |
| Bsh1285I | CGRYCG | 1 cut(s) | 168 |
| BshFI | GGCC | 1 cut(s) | 512 |
| BshNI | GGYRCC | 1 cut(s) | 472 |
| BsiEI | CGRYCG | 1 cut(s) | 168 |
| BsiHKCI | CYCGRG | 1 cut(s) | 181 |
| BsiSI | CCGG | 4 cut(s) | 149, 275, 298, 306 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 217, 281 |
| BsmAI | GTCTC | 3 cut(s) | 130, 163, 184 |
| BsnI | GGCC | 1 cut(s) | 512 |
| Bso31I | GGTCTC | 2 cut(s) | 130, 184 |
| BsoBI | CYCGRG | 1 cut(s) | 181 |
| Bsp1286I | GDGCHC | 1 cut(s) | 297 |
| Bsp143I | GATC | 3 cut(s) | 74, 165, 201 |
| BspANI | GGCC | 1 cut(s) | 512 |
| BspCNI | CTCAG | 1 cut(s) | 216 |
| BspFNI | CGCG | 3 cut(s) | 125, 170, 320 |
| BspLI | GGNNCC | 3 cut(s) | 296, 304, 474 |
| BspT107I | GGYRCC | 1 cut(s) | 472 |
| BspTNI | GGTCTC | 2 cut(s) | 130, 184 |
| BssECI | CCNNGG | 2 cut(s) | 275, 298 |
| BssMI | GATC | 3 cut(s) | 74, 165, 201 |
| BssNI | GRCGYC | 1 cut(s) | 473 |
| Bst6I | CTCTTC | 1 cut(s) | 128 |
| BstACI | GRCGYC | 1 cut(s) | 473 |
| BstC8I | GCNNGC | 1 cut(s) | 293 |
| BstDEI | CTNAG | 2 cut(s) | 224, 453 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 215 |
| BstF5I | GGATG | 1 cut(s) | 285 |
| BstFNI | CGCG | 3 cut(s) | 125, 170, 320 |
| BstH2I | RGCGCY | 1 cut(s) | 476 |
| BstHHI | GCGC | 3 cut(s) | 127, 320, 475 |
| BstKTI | GATC | 3 cut(s) | 77, 168, 204 |
| BstMAI | GTCTC | 3 cut(s) | 130, 163, 184 |
| BstMBI | GATC | 3 cut(s) | 74, 165, 201 |
| BstMCI | CGRYCG | 1 cut(s) | 168 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 193 |
| BstSCI | CCNGG | 3 cut(s) | 274, 297, 305 |
| BstUI | CGCG | 3 cut(s) | 125, 170, 320 |
| BstV2I | GAAGAC | 1 cut(s) | 359 |
| BstX2I | RGATCY | 1 cut(s) | 201 |
| BstYI | RGATCY | 1 cut(s) | 201 |
| BsuRI | GGCC | 1 cut(s) | 512 |
| BtsCI | GGATG | 1 cut(s) | 285 |
| Cac8I | GCNNGC | 1 cut(s) | 293 |
| CfoI | GCGC | 3 cut(s) | 127, 320, 475 |
| Cfr13I | GGNCC | 1 cut(s) | 208 |
| CviJI | RGCY | 7 cut(s) | 187, 235, 295, 305, 373, 452, 512 |
| CviKI_1 | RGCY | 7 cut(s) | 187, 235, 295, 305, 373, 452, 512 |
| DdeI | CTNAG | 2 cut(s) | 224, 453 |
| DinI | GGCGCC | 1 cut(s) | 474 |
| DpnI | GATC | 3 cut(s) | 76, 167, 203 |
| DpnII | GATC | 3 cut(s) | 74, 165, 201 |
| Eam1104I | CTCTTC | 1 cut(s) | 128 |
| EarI | CTCTTC | 1 cut(s) | 128 |
| Eco24I | GRGCYC | 1 cut(s) | 297 |
| Eco31I | GGTCTC | 2 cut(s) | 130, 184 |
| Eco47I | GGWCC | 1 cut(s) | 208 |
| Eco88I | CYCGRG | 1 cut(s) | 181 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 215 |
| EcoT38I | GRGCYC | 1 cut(s) | 297 |
| EgeI | GGCGCC | 1 cut(s) | 474 |
| EheI | GGCGCC | 1 cut(s) | 474 |
| FaiI | YATR | 1 cut(s) | 524 |
| FauI | CCCGC | 2 cut(s) | 284, 319 |
| Fnu4HI | GCNGC | 7 cut(s) | 123, 128, 316, 321, 324, 390, 393 |
| FokI | GGATG | 1 cut(s) | 292 |
| FriOI | GRGCYC | 1 cut(s) | 297 |
| Fsp4HI | GCNGC | 7 cut(s) | 123, 128, 316, 321, 324, 390, 393 |
| GlaI | GCGC | 3 cut(s) | 126, 319, 474 |
| GluI | GCNGC | 7 cut(s) | 123, 128, 316, 321, 324, 390, 393 |
| GsaI | CCCAGC | 1 cut(s) | 239 |
| GsuI | CTGGAG | 1 cut(s) | 218 |
| HaeII | RGCGCY | 1 cut(s) | 476 |
| HaeIII | GGCC | 1 cut(s) | 512 |
| HapII | CCGG | 4 cut(s) | 149, 275, 298, 306 |
| HhaI | GCGC | 3 cut(s) | 127, 320, 475 |
| Hin1I | GRCGYC | 1 cut(s) | 473 |
| Hin6I | GCGC | 3 cut(s) | 125, 318, 473 |
| HinP1I | GCGC | 3 cut(s) | 125, 318, 473 |
| HindIII | AAGCTT | 1 cut(s) | 371 |
| HinfI | GANTC | 5 cut(s) | 15, 285, 377, 495, 515 |
| HpaII | CCGG | 4 cut(s) | 149, 275, 298, 306 |
| HphI | GGTGA | 3 cut(s) | 274, 418, 430 |
| Hpy166II | GTNNAC | 1 cut(s) | 429 |
| Hpy188I | TCNGA | 2 cut(s) | 74, 208 |
| Hpy188III | TCNNGA | 2 cut(s) | 78, 499 |
| Hpy8I | GTNNAC | 1 cut(s) | 429 |
| Hpy99I | CGWCG | 2 cut(s) | 107, 259 |
| HpyAV | CCTTC | 8 cut(s) | 304, 325, 340, 439, 463, 484, 496, 529 |
| HpyCH4IV | ACGT | 1 cut(s) | 425 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 193 |
| HpyF3I | CTNAG | 2 cut(s) | 224, 453 |
| HpySE526I | ACGT | 1 cut(s) | 425 |
| Hsp92I | GRCGYC | 1 cut(s) | 473 |
| HspAI | GCGC | 3 cut(s) | 125, 318, 473 |
| KasI | GGCGCC | 1 cut(s) | 472 |
| Kzo9I | GATC | 3 cut(s) | 74, 165, 201 |
| LmnI | GCTCC | 2 cut(s) | 300, 302 |
| LpnPI | CCDG | 9 cut(s) | 162, 182, 206, 221, 224, 288, 311, 319, 494 |
| LweI | GCATC | 3 cut(s) | 240, 261, 376 |
| MaeII | ACGT | 1 cut(s) | 425 |
| MaeIII | GTNAC | 1 cut(s) | 496 |
| MalI | GATC | 3 cut(s) | 76, 167, 203 |
| MboI | GATC | 3 cut(s) | 74, 165, 201 |
| MboII | GAAGA | 6 cut(s) | 145, 355, 364, 409, 499, 541 |
| MflI | RGATCY | 1 cut(s) | 201 |
| MhlI | GDGCHC | 1 cut(s) | 297 |
| MluCI | AATT | 1 cut(s) | 540 |
| Mly113I | GGCGCC | 1 cut(s) | 473 |
| MlyI | GAGTC | 3 cut(s) | 9, 504, 524 |
| MseI | TTAA | 2 cut(s) | 402, 411 |
| MspI | CCGG | 4 cut(s) | 149, 275, 298, 306 |
| MspR9I | CCNGG | 3 cut(s) | 276, 299, 307 |
| MvnI | CGCG | 3 cut(s) | 125, 170, 320 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 193 |
| NarI | GGCGCC | 1 cut(s) | 473 |
| NciI | CCSGG | 3 cut(s) | 276, 299, 307 |
| NdeII | GATC | 3 cut(s) | 74, 165, 201 |
| NlaIV | GGNNCC | 3 cut(s) | 296, 304, 474 |
| NmeAIII | GCCGAG | 2 cut(s) | 140, 538 |
| NmuCI | GTSAC | 1 cut(s) | 496 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 431, 524 |
| PfeI | GAWTC | 2 cut(s) | 285, 377 |
| PflFI | GACNNNGTC | 1 cut(s) | 176 |
| PkrI | GCNGC | 7 cut(s) | 124, 129, 317, 322, 325, 391, 394 |
| Ple19I | CGATCG | 1 cut(s) | 168 |
| PleI | GAGTC | 3 cut(s) | 9, 503, 523 |
| PluTI | GGCGCC | 1 cut(s) | 476 |
| PpsI | GAGTC | 3 cut(s) | 9, 503, 523 |
| PspFI | CCCAGC | 1 cut(s) | 235 |
| PspN4I | GGNNCC | 3 cut(s) | 296, 304, 474 |
| PspPI | GGNCC | 1 cut(s) | 208 |
| PsuI | RGATCY | 1 cut(s) | 201 |
| PsyI | GACNNNGTC | 1 cut(s) | 176 |
| PvuI | CGATCG | 1 cut(s) | 168 |
| RgaI | GCGATCGC | 1 cut(s) | 168 |
| SaqAI | TTAA | 2 cut(s) | 402, 411 |
| SatI | GCNGC | 7 cut(s) | 123, 128, 316, 321, 324, 390, 393 |
| Sau3AI | GATC | 3 cut(s) | 74, 165, 201 |
| Sau96I | GGNCC | 1 cut(s) | 208 |
| SchI | GAGTC | 3 cut(s) | 9, 504, 524 |
| ScrFI | CCNGG | 3 cut(s) | 276, 299, 307 |
| SduI | GDGCHC | 1 cut(s) | 297 |
| SfaAI | GCGATCGC | 1 cut(s) | 168 |
| SfaNI | GCATC | 3 cut(s) | 240, 261, 376 |
| SfoI | GGCGCC | 1 cut(s) | 474 |
| SgfI | GCGATCGC | 1 cut(s) | 168 |
| SinI | GGWCC | 1 cut(s) | 208 |
| Sse9I | AATT | 1 cut(s) | 540 |
| SspDI | GGCGCC | 1 cut(s) | 472 |
| StyD4I | CCNGG | 3 cut(s) | 274, 297, 305 |
| TaiI | ACGT | 1 cut(s) | 428 |
| TaqI | TCGA | 2 cut(s) | 518, 557 |
| TasI | AATT | 1 cut(s) | 540 |
| TauI | GCSGC | 7 cut(s) | 125, 130, 318, 323, 326, 392, 395 |
| TfiI | GAWTC | 2 cut(s) | 285, 377 |
| Tru1I | TTAA | 2 cut(s) | 402, 411 |
| Tru9I | TTAA | 2 cut(s) | 402, 411 |
| TseFI | GTSAC | 1 cut(s) | 496 |
| Tsp45I | GTSAC | 1 cut(s) | 496 |
| TspDTI | ATGAA | 1 cut(s) | 548 |
| TspGWI | ACGGA | 1 cut(s) | 230 |
| Tth111I | GACNNNGTC | 1 cut(s) | 176 |
| VpaK11BI | GGWCC | 1 cut(s) | 208 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 215 |