Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0013379

Physical Location & Seq

Genomic Coordinates Reverse (-)

10686836 .. 10689768

Gene Structure 2933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g18370.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGAAGCAAGTGACATGGACATTCCAAACCTTCCGCAACGTATTAAAGACATGCATAGCCGAGAGAGACCTTTACACAGGCAAAGCCCTCCACGCCCTCTACTTCAAGTCCCTCATTCCTTCTTCCACCTACATTTCCAACCACTTCATCCTTCTCTACTCCAATTCCCGCCGCCTCCTCTCCGCCCGCAACGCCTTCTGCGCCACTCACGACCCCAATGTCTTCTCCTACAACGCCATCATCGCCGCCTATGCTAAACAATCGCAGACCAAACTTGCACACCAACTGTTCGACGAAATTCCTGAACCGGACTTGGTCTCTTACAACACTCTCATTTCGGCTTATGCCGAAAGGGGTGAGACTGAGAAGGCATTGGGGTTGTTTGGTAGGATGAGAGAGGTGGGTTTAGACCCGGATGGGTTTACTATCTCGGGGGTGATCACCGGGTGTTGCGACGATGTTGGTTTGATCAGGCAGTTGCATTGTGTGGTGGTTCGAGGGGGGTTTGATTGGTATGTTTCAGTGAGCAATGCACTGCTGAGTTACTATAGTAAAAATGGGTTGTTGGAGGAGGCGAAGAGGGTGTTTAGTTTGATGGGAGGAATGCAAGATGAAGTGACATGGAACTCAATGATTGTGGCGTATGGGCAGCACCGAGAAGGGTTGAAGGCGTTGGGGCTGTTTCAGGAGATGGTGAGGAGGGGGTTTAGTGTGGACATGTTTACATTGGCTAGTGTTTTGACTGCGTTTACTTGCGTGGAGGACTTGTTGGGTGGGCTTCAGTTTCATGCTAAGTTGATCAAAACTGGTTTTCACCAGAATTCTCATGTTGGGAGTGGGCTGATTGATTTGTATTCCAAGTGTGCTGGTGGCATGTCGGAATGTAGGAAAGTGTTTGAAGAGATTCCTGCGCCGGATTTGGTTCTTTGGAACACGATGATTTCCGGATACTCTCAGAGTGACGAGTTTTCTGAAGATGCTATTGATTGCTTGCGGCATATGCAACGTGTTGGTTACTGCCCTGATGATTGCAGTTTTGTCTGTGTGGTTAGTGCATGCTCTAATTTGTCGTCGCCCTTCCAGGGGAAGCAGATACATGCCCTGGCAATCAAATCTGAGATCCCTTCTAATAGAATTTCAGTGAACAATGCTCTAGTTGCAATGTACTCAAAATGCGGGAAACTTCAGGATGCAAGAAGGTTATTTGATAGGATGCCGGAGCATAATACTGTCTCTTTGAATTCGATGATTGCAGGTTATGCACAGCATGGGATCGGGATGGAATCATTATGCCTTTTTGAACATATGCTTCAGACAAATGTAGTTCCTACAAGTATAACCTTTATCTCTGTCCTTTCTGCTTGTGCTCACACTGGAAAAGTGGAGGAGGGTAGGAAGTACTTCAGTATGATGCAGGAGAAGTTCGGAATCAAACCAGATGTAGGACATTACTCATGCATGATTGATCTTTTAGGTCGAGCAGGCAAACTGGGTGAAGCTGAGAGGCTCATTGAGGCGATGCCGTTCAGCCCTGGCACCATTGGTTGGGCTACATTACTCAGTGCCTGTAGAACGCATGGAAATATTGATCTAGCAGTTGAGGCAGCCAATAAGTTTCTTCAGTTGGAACCTACAAATGCTGTTCCATATGTTATGCTGTCGAATATGTACTCTAGAGCTGGAAAATGGGATGAGGTAGCAAAAATGAGAAAGTTGATGCGAGATAGAGGAGTGAAGAAGAAACCAGGTTTAAGTTGGATTGAGGTGAATAAGAGGGTACATGTTTTTGTGGCTGAAGAAAGCTCCCACCCAATGATTAAAGAAATTCATGAATACTTGGAGGAGATGTCAAGGAAGATGAAGAAAGCTGGGTACGTGCCTGATGTAAGATGGGCCTTGGTAAAGGATGATGAAACTGTGGAAGGAGAGAAGGAGATAATGTTAGGGCATCACAGTGAAAAGTTAGCAGTTGCTTTCGGTTTGATCTCGACTAGAGAAGGGGAGCCTATACTGGTGGTGAAGAACCTGAGGATATGCGGTGACTGCCACAATGCAATCAAGTTTATCTCTGCCATTGCTGGAAGGGAAATCACTGTGAGGGATGCCCACAGGTTTCATTGCTTTAAGGATGGGCAGTGCTCTTGTGGGGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

720

Amino Acids

80.36

Weight (kDa)

7.09

Isoelectric Point (pI)

39.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	102 - 132	9.7e-07	PPR repeat
PPR_3	PF13812	102 - 141	8.5e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	103 - 152	1.4e-13	PPR repeat family
PPR	PF01535	106 - 135	4.2e-08	PPR repeat
PPR_2	PF13041	204 - 250	4.3e-09	PPR repeat family
PPR	PF01535	206 - 236	2.8e-08	PPR repeat
PPR_2	PF13041	305 - 354	3.8e-07	PPR repeat family
PPR_2	PF13041	409 - 457	2.9e-07	PPR repeat family
PPR_1	PF12854	476 - 507	1.4e-06	PPR repeat
E_motif	PF20431	526 - 588	4.8e-20	E motif
DYW_deaminase	PF14432	624 - 719	5.7e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013379)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49710
fragaria_vesca	FvH4_1g18370
malus_domestica	MD15G1301900.v1.1
prunus_persica	Prupe.6G215200_v2.0.a1
pyrus_communis	pycom02g15520 pycom15g26470
rosa_chinensis	RchiOBHm_Chr2g0109081
rosa_laevigata	RLG00000017704
rosa_multiflora	Rmu_co8217570.1_g000001 Rmu_co8359919.1_g000001 Rmu_sc0003725.1_g000003
rosa_roxburghii	Rroxscaffold_2G00134590
rosa_rugosa	Rorug02G0157000
rosa_samantha	Rh2AG207900 Rh2CG211300 Rh2DG214300
rosa_wichuraiana	Rw0G004070 Rw2G016510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	218
Acc36I	ACCTGC	1 cut(s)	1244
AccB1I	GGYRCC	1 cut(s)	1535
AccB7I	CCANNNNNTGG	1 cut(s)	1545
AccIII	TCCGGA	1 cut(s)	944
AciI	CCGC	9 cut(s)	34, 169, 172, 183, 187, 246, 994, 1176, 2037
AclWI	GGATC	2 cut(s)	1114, 1280
AcsI	RAATTY	5 cut(s)	297, 820, 1134, 1240, 1824
AcuI	CTGAAG	7 cut(s)	764, 993, 1169, 1295, 1387, 1604, 1815
AdeI	CACNNNGTG	1 cut(s)	447
AfaI	GTAC	5 cut(s)	1166, 1400, 1670, 1779, 1874
AfiI	CCNNNNNNNGG	4 cut(s)	1082, 1083, 1442, 1545
AflIII	ACRYGT	3 cut(s)	717, 1006, 1780
AgsI	TTSAA	5 cut(s)	106, 667, 899, 1240, 1301
AjnI	CCWGG	4 cut(s)	1080, 1101, 1531, 1744
AluBI	AGCT	4 cut(s)	1499, 1679, 1803, 1868
AluI	AGCT	4 cut(s)	1499, 1679, 1803, 1868
Alw21I	GWGCWC	2 cut(s)	1369, 2141
Alw26I	GTCTC	4 cut(s)	60, 322, 353, 1237
AlwI	GGATC	2 cut(s)	1114, 1280
AlwNI	CAGNNNCTG	1 cut(s)	1566
Ama87I	CYCGRG	1 cut(s)	430
Aor13HI	TCCGGA	1 cut(s)	944
AoxI	GGCC	1 cut(s)	1893
ApeKI	GCWGC	2 cut(s)	649, 1604
ApoI	RAATTY	5 cut(s)	297, 820, 1134, 1240, 1824
Asp700I	GAANNNNTTC	2 cut(s)	903, 1400
AspLEI	GCGC	2 cut(s)	203, 913
AspS9I	GGNCC	1 cut(s)	1893
AsuC2I	CCSGG	2 cut(s)	413, 445
AsuHPI	GGTGA	9 cut(s)	368, 433, 448, 706, 806, 1505, 1777, 2029, 2051
AvaI	CYCGRG	1 cut(s)	430
AxyI	CCTNAGG	1 cut(s)	2027
BanI	GGYRCC	1 cut(s)	1535
BbsI	GAAGAC	1 cut(s)	214
Bbv12I	GWGCWC	2 cut(s)	1369, 2141
BbvI	GCAGC	2 cut(s)	661, 1616
BccI	CCATC	7 cut(s)	245, 410, 589, 685, 1273, 1884, 2123
BceAI	ACGGC	1 cut(s)	1507
BciT130I	CCWGG	4 cut(s)	1082, 1103, 1533, 1746
BciVI	GTATCC	1 cut(s)	941
BclI	TGATCA	3 cut(s)	438, 468, 798
BcnI	CCSGG	2 cut(s)	413, 445
BcoDI	GTCTC	4 cut(s)	60, 322, 353, 1237
BfaI	CTAG	5 cut(s)	732, 1154, 1592, 1674, 1992
BfmI	CTRYAG	2 cut(s)	547, 1567
BfuAI	ACCTGC	1 cut(s)	1244
BfuI	GTATCC	1 cut(s)	941
BisI	GCNGC	5 cut(s)	172, 246, 650, 995, 1605
BlsI	GCNGC	5 cut(s)	173, 247, 651, 996, 1606
BmcAI	AGTACT	1 cut(s)	1400
Bme1390I	CCNGG	6 cut(s)	413, 445, 1082, 1103, 1533, 1746
BmeT110I	CYCGRG	1 cut(s)	430
BmgT120I	GGNCC	1 cut(s)	1893
BmiI	GGNNCC	3 cut(s)	1537, 1629, 2004
BmrFI	CCNGG	6 cut(s)	413, 445, 1082, 1103, 1533, 1746
BmrI	ACTGGG	1 cut(s)	1499
BmsI	GCATC	8 cut(s)	967, 1180, 1203, 1401, 1509, 1707, 1957, 2092
BmuI	ACTGGG	1 cut(s)	1499
BpiI	GAAGAC	1 cut(s)	214
BpuMI	CCSGG	2 cut(s)	413, 445
BsaAI	YACGTR	1 cut(s)	1876
BsaI	GGTCTC	2 cut(s)	60, 322
BsaJI	CCNNGG	4 cut(s)	1081, 1101, 1531, 1896
BsaWI	WCCGGW	2 cut(s)	307, 944
BsaXI	ACNNNNNCTCC	6 cut(s)	752, 782, 1832, 1862, 1925, 1955
Bsc4I	CCNNNNNNNGG	4 cut(s)	1082, 1083, 1442, 1545
Bse1I	ACTGG	4 cut(s)	811, 1378, 1494, 2016
Bse21I	CCTNAGG	1 cut(s)	2027
Bse3DI	GCAATG	4 cut(s)	535, 1167, 2073, 2116
BseAI	TCCGGA	1 cut(s)	944
BseBI	CCWGG	4 cut(s)	1082, 1103, 1533, 1746
BseDI	CCNNGG	4 cut(s)	1081, 1101, 1531, 1896
BseLI	CCNNNNNNNGG	4 cut(s)	1082, 1083, 1442, 1545
BseMI	GCAATG	4 cut(s)	535, 1167, 2073, 2116
BseMII	CTCAG	7 cut(s)	354, 530, 968, 1107, 1491, 1573, 2018
BseNI	ACTGG	4 cut(s)	811, 1378, 1494, 2016
BseRI	GAGGAG	6 cut(s)	167, 584, 712, 1400, 1743, 1856
BseXI	GCAGC	2 cut(s)	661, 1616
BseYI	CCCAGC	1 cut(s)	1868
BshFI	GGCC	1 cut(s)	1895
BshNI	GGYRCC	1 cut(s)	1535
BsiHKAI	GWGCWC	2 cut(s)	1369, 2141
BsiHKCI	CYCGRG	1 cut(s)	430
BsiSI	CCGG	6 cut(s)	308, 413, 444, 914, 945, 1217
BslFI	GGGAC	1 cut(s)	94
BslI	CCNNNNNNNGG	4 cut(s)	1082, 1083, 1442, 1545
BsmAI	GTCTC	4 cut(s)	60, 322, 353, 1237
BsmFI	GGGAC	1 cut(s)	94
BsmI	GAATGC	1 cut(s)	609
BsnI	GGCC	1 cut(s)	1895
Bso31I	GGTCTC	2 cut(s)	60, 322
BsoBI	CYCGRG	1 cut(s)	430
Bsp1286I	GDGCHC	2 cut(s)	1369, 2141
Bsp13I	TCCGGA	1 cut(s)	944
Bsp143I	GATC	8 cut(s)	438, 468, 798, 1119, 1272, 1465, 1588, 1983
BspACI	CCGC	9 cut(s)	34, 169, 172, 183, 187, 246, 994, 1176, 2037
BspANI	GGCC	1 cut(s)	1895
BspCNI	CTCAG	7 cut(s)	355, 531, 967, 1108, 1492, 1572, 2019
BspEI	TCCGGA	1 cut(s)	944
BspHI	TCATGA	1 cut(s)	1828
BspLI	GGNNCC	3 cut(s)	1537, 1629, 2004
BspMI	ACCTGC	1 cut(s)	1244
BspPI	GGATC	2 cut(s)	1114, 1280
BspT107I	GGYRCC	1 cut(s)	1535
BspTNI	GGTCTC	2 cut(s)	60, 322
BsrDI	GCAATG	4 cut(s)	535, 1167, 2073, 2116
BsrI	ACTGG	4 cut(s)	811, 1378, 1494, 2016
BssECI	CCNNGG	4 cut(s)	1081, 1101, 1531, 1896
BssMI	GATC	8 cut(s)	438, 468, 798, 1119, 1272, 1465, 1588, 1983
BssT1I	CCWWGG	1 cut(s)	1896
Bst2UI	CCWGG	4 cut(s)	1082, 1103, 1533, 1746
Bst4CI	ACNGT	5 cut(s)	288, 1231, 1918, 1955, 2095
Bst6I	CTCTTC	2 cut(s)	572, 894
BstAPI	GCANNNNNTGC	1 cut(s)	1259
BstBAI	YACGTR	1 cut(s)	1876
BstC8I	GCNNGC	4 cut(s)	187, 992, 1057, 1483
BstDEI	CTNAG	8 cut(s)	363, 539, 792, 954, 1116, 1500, 1559, 2027
BstHHI	GCGC	2 cut(s)	203, 913
BstKTI	GATC	8 cut(s)	441, 471, 801, 1122, 1275, 1468, 1591, 1986
BstMAI	GTCTC	4 cut(s)	60, 322, 353, 1237
BstMBI	GATC	8 cut(s)	438, 468, 798, 1119, 1272, 1465, 1588, 1983
BstNI	CCWGG	4 cut(s)	1082, 1103, 1533, 1746
BstNSI	RCATGY	6 cut(s)	54, 721, 877, 1059, 1100, 1784
BstSCI	CCNGG	6 cut(s)	411, 443, 1080, 1101, 1531, 1744
BstSFI	CTRYAG	2 cut(s)	547, 1567
BstV1I	GCAGC	2 cut(s)	661, 1616
BstV2I	GAAGAC	1 cut(s)	214
BstX2I	RGATCY	1 cut(s)	1119
BstYI	RGATCY	1 cut(s)	1119
Bsu36I	CCTNAGG	1 cut(s)	2027
BsuI	GTATCC	1 cut(s)	941
BsuRI	GGCC	1 cut(s)	1895
BtgZI	GCGATG	2 cut(s)	226, 1532
BtsI	GCAGTG	2 cut(s)	533, 2141
BtsIMutI	CAGTG	8 cut(s)	528, 533, 1146, 1371, 1567, 1960, 2091, 2141
BveI	ACCTGC	1 cut(s)	1244
Cac8I	GCNNGC	4 cut(s)	187, 992, 1057, 1483
CaiI	CAGNNNCTG	1 cut(s)	1566
CciI	TCATGA	1 cut(s)	1828
CfoI	GCGC	2 cut(s)	203, 913
Cfr13I	GGNCC	1 cut(s)	1893
CsiI	ACCWGGT	1 cut(s)	1744
Csp6I	GTAC	5 cut(s)	1165, 1399, 1669, 1778, 1873
CspCI	CAANNNNNGTGG	2 cut(s)	618, 653
CviQI	GTAC	5 cut(s)	1165, 1399, 1669, 1778, 1873
DdeI	CTNAG	8 cut(s)	363, 539, 792, 954, 1116, 1500, 1559, 2027
DpnI	GATC	8 cut(s)	440, 470, 800, 1121, 1274, 1467, 1590, 1985
DpnII	GATC	8 cut(s)	438, 468, 798, 1119, 1272, 1465, 1588, 1983
DraIII	CACNNNGTG	1 cut(s)	447
DrdI	GACNNNNNNGTC	1 cut(s)	218
DseDI	GACNNNNNNGTC	1 cut(s)	218
Eam1104I	CTCTTC	2 cut(s)	572, 894
EarI	CTCTTC	2 cut(s)	572, 894
EciI	GGCGGA	1 cut(s)	172
Eco130I	CCWWGG	1 cut(s)	1896
Eco31I	GGTCTC	2 cut(s)	60, 322
Eco57I	CTGAAG	7 cut(s)	764, 993, 1169, 1295, 1387, 1604, 1815
Eco81I	CCTNAGG	1 cut(s)	2027
Eco88I	CYCGRG	1 cut(s)	430
EcoRI	GAATTC	2 cut(s)	820, 1240
EcoRII	CCWGG	4 cut(s)	1080, 1101, 1531, 1744
EcoT14I	CCWWGG	1 cut(s)	1896
EcoT22I	ATGCAT	2 cut(s)	56, 1460
ErhI	CCWWGG	1 cut(s)	1896
FaqI	GGGAC	1 cut(s)	94
FauI	CCCGC	3 cut(s)	176, 194, 1169
FauNDI	CATATG	3 cut(s)	999, 1305, 1648
FbaI	TGATCA	3 cut(s)	438, 468, 798
Fnu4HI	GCNGC	5 cut(s)	172, 246, 650, 995, 1605
Fsp4HI	GCNGC	5 cut(s)	172, 246, 650, 995, 1605
FspBI	CTAG	5 cut(s)	732, 1154, 1592, 1674, 1992
GlaI	GCGC	2 cut(s)	202, 912
GluI	GCNGC	5 cut(s)	172, 246, 650, 995, 1605
GsaI	CCCAGC	1 cut(s)	1872
HaeIII	GGCC	1 cut(s)	1895
HapII	CCGG	6 cut(s)	308, 413, 444, 914, 945, 1217
HhaI	GCGC	2 cut(s)	203, 913
Hin6I	GCGC	2 cut(s)	201, 911
HinP1I	GCGC	2 cut(s)	201, 911
HinfI	GANTC	3 cut(s)	904, 1283, 1428
HpaII	CCGG	6 cut(s)	308, 413, 444, 914, 945, 1217
HphI	GGTGA	9 cut(s)	368, 433, 448, 706, 806, 1505, 1777, 2029, 2051
Hpy166II	GTNNAC	5 cut(s)	423, 715, 723, 750, 1144
Hpy188I	TCNGA	6 cut(s)	880, 957, 973, 1117, 1314, 1427
Hpy188III	TCNNGA	9 cut(s)	209, 302, 686, 945, 1187, 1276, 1674, 1829, 1987
Hpy8I	GTNNAC	5 cut(s)	423, 715, 723, 750, 1144
Hpy99I	CGWCG	3 cut(s)	296, 458, 1075
HpyCH4III	ACNGT	5 cut(s)	288, 1231, 1918, 1955, 2095
HpyCH4IV	ACGT	3 cut(s)	39, 1006, 1875
HpyF3I	CTNAG	8 cut(s)	363, 539, 792, 954, 1116, 1500, 1559, 2027
HpySE526I	ACGT	3 cut(s)	39, 1006, 1875
HspAI	GCGC	2 cut(s)	201, 911
Kpn2I	TCCGGA	1 cut(s)	944
Ksp22I	TGATCA	3 cut(s)	438, 468, 798
Kzo9I	GATC	8 cut(s)	438, 468, 798, 1119, 1272, 1465, 1588, 1983
LmnI	GCTCC	3 cut(s)	1219, 1808, 2002
Lsp1109I	GCAGC	2 cut(s)	661, 1616
LweI	GCATC	8 cut(s)	967, 1180, 1203, 1401, 1509, 1707, 1957, 2092
MabI	ACCWGGT	1 cut(s)	1744
MaeI	CTAG	5 cut(s)	732, 1154, 1592, 1674, 1992
MaeII	ACGT	3 cut(s)	39, 1006, 1875
MaeIII	GTNAC	6 cut(s)	10, 542, 616, 959, 1013, 2039
MalI	GATC	8 cut(s)	440, 470, 800, 1121, 1274, 1467, 1590, 1985
MboI	GATC	8 cut(s)	438, 468, 798, 1119, 1272, 1465, 1588, 1983
MflI	RGATCY	1 cut(s)	1119
MhlI	GDGCHC	2 cut(s)	1369, 2141
MluCI	AATT	7 cut(s)	163, 297, 820, 1063, 1134, 1240, 1824
MmeI	TCCRAC	5 cut(s)	162, 546, 858, 1605, 1736
Mph1103I	ATGCAT	2 cut(s)	56, 1460
MroI	TCCGGA	1 cut(s)	944
MroXI	GAANNNNTTC	2 cut(s)	903, 1400
MseI	TTAA	4 cut(s)	44, 1751, 1818, 2124
MslI	CAYNNNNRTG	1 cut(s)	1953
MspI	CCGG	6 cut(s)	308, 413, 444, 914, 945, 1217
MspR9I	CCNGG	6 cut(s)	413, 445, 1082, 1103, 1533, 1746
Mva1269I	GAATGC	1 cut(s)	609
MvaI	CCWGG	4 cut(s)	1082, 1103, 1533, 1746
NciI	CCSGG	2 cut(s)	413, 445
NdeI	CATATG	3 cut(s)	999, 1305, 1648
NdeII	GATC	8 cut(s)	438, 468, 798, 1119, 1272, 1465, 1588, 1983
NlaIV	GGNNCC	3 cut(s)	1537, 1629, 2004
NmeAIII	GCCGAG	1 cut(s)	85
NmuCI	GTSAC	4 cut(s)	10, 616, 959, 2039
NsiI	ATGCAT	2 cut(s)	56, 1460
NspI	RCATGY	6 cut(s)	54, 721, 877, 1059, 1100, 1784
PaeI	GCATGC	1 cut(s)	1059
PagI	TCATGA	1 cut(s)	1828
PciI	ACATGT	2 cut(s)	717, 1780
PctI	GAATGC	1 cut(s)	609
PdmI	GAANNNNTTC	2 cut(s)	903, 1400
PfeI	GAWTC	3 cut(s)	904, 1283, 1428
PflFI	GACNNNGTC	1 cut(s)	314
PflMI	CCANNNNNTGG	1 cut(s)	1545
PkrI	GCNGC	5 cut(s)	173, 247, 651, 996, 1606
Ppu21I	YACGTR	1 cut(s)	1876
PscI	ACATGT	2 cut(s)	717, 1780
Psp6I	CCWGG	4 cut(s)	1080, 1101, 1531, 1744
PspFI	CCCAGC	1 cut(s)	1868
PspGI	CCWGG	4 cut(s)	1080, 1101, 1531, 1744
PspN4I	GGNNCC	3 cut(s)	1537, 1629, 2004
PspPI	GGNCC	1 cut(s)	1893
PstNI	CAGNNNCTG	1 cut(s)	1566
PsuI	RGATCY	1 cut(s)	1119
PsyI	GACNNNGTC	1 cut(s)	314
RsaI	GTAC	5 cut(s)	1166, 1400, 1670, 1779, 1874
RsaNI	GTAC	5 cut(s)	1165, 1399, 1669, 1778, 1873
RseI	CAYNNNNRTG	1 cut(s)	1953
SaqAI	TTAA	4 cut(s)	44, 1751, 1818, 2124
SatI	GCNGC	5 cut(s)	172, 246, 650, 995, 1605
Sau3AI	GATC	8 cut(s)	438, 468, 798, 1119, 1272, 1465, 1588, 1983
Sau96I	GGNCC	1 cut(s)	1893
ScaI	AGTACT	1 cut(s)	1400
ScrFI	CCNGG	6 cut(s)	413, 445, 1082, 1103, 1533, 1746
SduI	GDGCHC	2 cut(s)	1369, 2141
SexAI	ACCWGGT	1 cut(s)	1744
SfaNI	GCATC	8 cut(s)	967, 1180, 1203, 1401, 1509, 1707, 1957, 2092
SfcI	CTRYAG	2 cut(s)	547, 1567
SmiMI	CAYNNNNRTG	1 cut(s)	1953
SphI	GCATGC	1 cut(s)	1059
Sse9I	AATT	7 cut(s)	163, 297, 820, 1063, 1134, 1240, 1824
SsiI	CCGC	9 cut(s)	34, 169, 172, 183, 187, 246, 994, 1176, 2037
SspI	AATATT	1 cut(s)	1585
SspMI	CTAG	5 cut(s)	732, 1154, 1592, 1674, 1992
StyD4I	CCNGG	6 cut(s)	411, 443, 1080, 1101, 1531, 1744
StyI	CCWWGG	1 cut(s)	1896
TaaI	ACNGT	5 cut(s)	288, 1231, 1918, 1955, 2095
TaiI	ACGT	3 cut(s)	42, 1009, 1878
TaqI	TCGA	6 cut(s)	291, 496, 1244, 1477, 1661, 1988
TasI	AATT	7 cut(s)	163, 297, 820, 1063, 1134, 1240, 1824
TatI	WGTACW	3 cut(s)	1164, 1398, 1668
TauI	GCSGC	3 cut(s)	174, 248, 997
TfiI	GAWTC	3 cut(s)	904, 1283, 1428
Tru1I	TTAA	4 cut(s)	44, 1751, 1818, 2124
Tru9I	TTAA	4 cut(s)	44, 1751, 1818, 2124
TscAI	CASTG	8 cut(s)	528, 540, 1146, 1378, 1567, 1960, 2098, 2141
TseFI	GTSAC	4 cut(s)	10, 616, 959, 2039
TseI	GCWGC	2 cut(s)	649, 1604
Tsp45I	GTSAC	4 cut(s)	10, 616, 959, 2039
TspDTI	ATGAA	9 cut(s)	17, 136, 627, 776, 1817, 1845, 1874, 1926, 2105
TspRI	CASTG	8 cut(s)	528, 540, 1146, 1378, 1567, 1960, 2098, 2141
Tth111I	GACNNNGTC	1 cut(s)	314
Van91I	CCANNNNNTGG	1 cut(s)	1545
XapI	RAATTY	5 cut(s)	297, 820, 1134, 1240, 1824
XbaI	TCTAGA	1 cut(s)	1673
XceI	RCATGY	6 cut(s)	54, 721, 877, 1059, 1100, 1784
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1752
XmnI	GAANNNNTTC	2 cut(s)	903, 1400
XspI	CTAG	5 cut(s)	732, 1154, 1592, 1674, 1992
ZrmI	AGTACT	1 cut(s)	1400
Zsp2I	ATGCAT	2 cut(s)	56, 1460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.