Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0013379

Physical Location & Seq

Genomic Coordinates Reverse (-)

12318550 .. 12320709

Gene Structure 2160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g15520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGAACCAATTCTCTTGTAATTTGCAAAGCTTTCGCCACCTTCTGAAAACATGCATTGCCGACAGAGACCTCTTTACAGGCAAAGCCCTCCACGCACTCTACGTCAAGTCCCTCCTTCCTCCTTCCACATACCTTTCCAACCACTTCATCCTCCTTTACTCCAAATGCGGCCGTCTCTCCGCCGCTCGCAGCGCCTTCGACCACACCCAGGACCCCAATGTCTTCTCCTTCAACGCTATCATTAATGCTTACGCGAAAGAGTCGCACACCCACATTGCACACCACCTGTTTGATAAAATTCCTCTGCCGGACTTGGTCTCTTATAACACTCTCATTTCTGCTTATGCCGATAGGGGGGAGACTGAGCCGGCGTTGAGCTTGTTCGCTGGGATGAGAAGAATGGGTCTCGACATGGATGGATTTACCATCTCTGCTGTGATCACGGGTTGTGGTGATGATGTCGGTTTGCTTAGGCAATTGCATTGTGTGGTGGTGTCGGGTGGCTTTGATTCATATGTTTCGGTGAACAATTCGCTTGTAACTTACTATAGTAAAAATGGGTTTCTGGAGGAGGCGAAACAGGTGTTCTTGGTGATGGGAGAGGTGAGAGATGAAGTGTCTTGGAATTCGATGATTGTGGCATATGGCCAGCACCGCCAAGGGTTGAAAGCGCTGGGGTTGTTTCAGGAAATGGTAAGGAGGGGGTTCAATGTCGACATGTTTACATTGGCAAGTGTTTTGACTGCATTTACGTGTGTGGAAGACTTGTTGGGTGGACTTCAGTTTCATGCTAAGTTGATCAAAACTGGTTTCCACCAGAATTCGCATGTTGGGAGTGGCTTAATTGATTTGTATTCAAAGTGTGCTGGTGGCATGGCAGAATGTGGGAAAGTGTTTCAAGAGATCCCTTTTCCAGATTTGGTTCTTTGGAACACGATAATTTCTGGGTATTCTCAAAATGATGAGTTCTCTGAAGACGCTCTTCATTGTTTCCGGAAAATGCAACGTGTTGGTCACAGCCCTGATGATTGCAGCTTCGTCTGTGTGATTAGTGCATGCTCTAATTTGTCATCCCCCTCTCAGGGAAAGCAGATTCATGCCTTAGAAATCAAATCTGACATCCCTTCAAATAAAATTTCGGTGAATAATGCTCTTGTTGCAATGTATTCGAAATGCGGAAATCTTCATGATGCAAGAAGGTTATTTGATAGAATGCCAGAGCATAACGCTGTCTCTTTAAATTCAATGATTGCAGGTTATGCACAGCATGGGATTGGAATAGAATCACTACAGCTTTTTGAACATATGCTTCAGATGGATATTGTTCCTACACGAGTAACCTTTATCTCTGTCCTTTCTGCTTGTGCTCACACTGGAAAAGTAGAGGAGGGTCAGAAGTATTTCTATATGATGAAGGAGAAGTTTGGGATTGAACCAGAAGCAGAGCACTATTCATGCATGATTGATCGTTTAGGTCGAGCAGGCAAACTGGGTGAAGCTGAGAGATTCATCGAGACGATGCCATTCTGCCCTGGCTCCATTGGCTGGGCTACATTACTCGGTGCCTGTAGAACGCATGGAAATATTGAACTAGCAGTAAAGGCATCCAATCAGCTTCTTCAGCTGGAACCTCTAAATGCTGCTCCATACGTGGTGCTGTCTAATATGTTTGCTAGAGCAGGCAAATGGGAAGAGGTATCAACAATTAGAAAGCATATGCGGGACAGAGGAGTGAAGAAGAAACCAGGTTGTAGTTGGATCGAGGTGAATAAGAGGGTACATGTTTTTGTGGCTGAAGAAATTTCCCACCCGATGATCAAAGAAATTCATGAATACTTGGGGGAGATGTCGAGGAAGATGAAGCAAGCGGGGTATGTGCCTGATTTAAGATGGACCTTGGTAAAGGACGATGAATCGGTGCAAGGAGAGAGGGAGATTAGGTTAGGGCATCACAGTGAAAAGCTAGCGGTTGCATTTGGGTTGCTCTCAACGAGAGAGGGAGAGCCTTTACTTGTGGTGAAGAACCTGAGGATTTGTGGGGACTGCCACAATGCAATCAAGTTTATCTCTGCCATTGCTGGGAGAGAAATCACTGTGAGAGATGCCCACAGGTTTCATTGCTTTAAGGACGGACATTGCTCTTGTGGGGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

720

Amino Acids

80.29

Weight (kDa)

6.91

Isoelectric Point (pI)

41.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	103 - 150	8.4e-11	PPR repeat family
PPR	PF01535	106 - 136	8.6e-06	PPR repeat
PPR_2	PF13041	204 - 250	7.7e-09	PPR repeat family
PPR	PF01535	206 - 236	3.9e-08	PPR repeat
PPR_2	PF13041	305 - 355	2.1e-09	PPR repeat family
PPR_2	PF13041	409 - 457	3.2e-06	PPR repeat family
E_motif	PF20431	526 - 588	1.4e-21	E motif
DYW_deaminase	PF14432	624 - 719	1e-34	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013379)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49710
fragaria_vesca	FvH4_1g18370
malus_domestica	MD15G1301900.v1.1
prunus_persica	Prupe.6G215200_v2.0.a1
pyrus_communis	pycom02g15520 pycom15g26470
rosa_chinensis	RchiOBHm_Chr2g0109081
rosa_laevigata	RLG00000017704
rosa_multiflora	Rmu_co8217570.1_g000001 Rmu_co8359919.1_g000001 Rmu_sc0003725.1_g000003
rosa_roxburghii	Rroxscaffold_2G00134590
rosa_rugosa	Rorug02G0157000
rosa_samantha	Rh2AG207900 Rh2CG211300 Rh2DG214300
rosa_wichuraiana	Rw0G004070 Rw2G016510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	324
AasI	GACNNNNNNGTC	1 cut(s)	218
Acc36I	ACCTGC	1 cut(s)	1244
AccB1I	GGYRCC	1 cut(s)	1562
AccB7I	CCANNNNNTGG	1 cut(s)	1545
AccBSI	CCGCTC	1 cut(s)	185
AccI	GTMKAC	1 cut(s)	714
AccII	CGCG	1 cut(s)	254
AccIII	TCCGGA	1 cut(s)	993
AciI	CCGC	8 cut(s)	168, 180, 183, 655, 1176, 1720, 1868, 1967
AclWI	GGATC	2 cut(s)	898, 1766
AcoI	YGGCCR	2 cut(s)	169, 646
AcsI	RAATTY	7 cut(s)	297, 625, 820, 1134, 1240, 1800, 1824
AcuI	CTGAAG	5 cut(s)	764, 993, 1295, 1604, 1815
AfaI	GTAC	1 cut(s)	1779
AfeI	AGCGCT	1 cut(s)	672
AfiI	CCNNNNNNNGG	6 cut(s)	208, 354, 1081, 1082, 1545, 2079
AflIII	ACRYGT	4 cut(s)	717, 752, 1006, 1780
AjnI	CCWGG	3 cut(s)	207, 1531, 1744
AluBI	AGCT	8 cut(s)	30, 378, 1035, 1294, 1499, 1615, 1624, 1963
AluI	AGCT	8 cut(s)	30, 378, 1035, 1294, 1499, 1615, 1624, 1963
Alw21I	GWGCWC	2 cut(s)	1369, 1449
Alw26I	GTCTC	7 cut(s)	60, 179, 322, 353, 410, 1237, 1508
AlwI	GGATC	2 cut(s)	898, 1766
Aor13HI	TCCGGA	1 cut(s)	993
Aor51HI	AGCGCT	1 cut(s)	672
AoxI	GGCC	2 cut(s)	169, 646
ApeKI	GCWGC	3 cut(s)	189, 1032, 1640
ApoI	RAATTY	7 cut(s)	297, 625, 820, 1134, 1240, 1800, 1824
AseI	ATTAAT	1 cut(s)	243
Asp700I	GAANNNNTTC	2 cut(s)	8, 1400
AspLEI	GCGC	2 cut(s)	194, 673
AspS9I	GGNCC	2 cut(s)	211, 1893
AsuHPI	GGTGA	8 cut(s)	464, 535, 604, 616, 1153, 1505, 1777, 2029
AsuII	TTCGAA	1 cut(s)	1169
AsuNHI	GCTAGC	1 cut(s)	1963
AvaII	GGWCC	2 cut(s)	211, 1893
AxyI	CCTNAGG	1 cut(s)	2027
BalI	TGGCCA	1 cut(s)	648
BanI	GGYRCC	1 cut(s)	1562
BauI	CACGAG	1 cut(s)	1332
BbsI	GAAGAC	3 cut(s)	214, 768, 981
Bbv12I	GWGCWC	2 cut(s)	1369, 1449
BbvI	GCAGC	3 cut(s)	201, 1044, 1627
BccI	CCATC	5 cut(s)	410, 434, 589, 1309, 1884
BceAI	ACGGC	1 cut(s)	156
BcgI	CGANNNNNNTGC	6 cut(s)	14, 48, 178, 212, 1149, 1183
BciT130I	CCWGG	3 cut(s)	209, 1533, 1746
BclI	TGATCA	3 cut(s)	438, 798, 1815
BcoDI	GTCTC	7 cut(s)	60, 179, 322, 353, 410, 1237, 1508
BfaI	CTAG	3 cut(s)	1592, 1674, 1964
BfmI	CTRYAG	3 cut(s)	547, 1289, 1567
BfoI	RGCGCY	2 cut(s)	195, 674
BfuAI	ACCTGC	1 cut(s)	1244
BisI	GCNGC	5 cut(s)	169, 183, 190, 1033, 1641
BlsI	GCNGC	5 cut(s)	170, 184, 191, 1034, 1642
Bme1390I	CCNGG	3 cut(s)	209, 1533, 1746
Bme18I	GGWCC	2 cut(s)	211, 1893
BmgT120I	GGNCC	2 cut(s)	211, 1893
BmiI	GGNNCC	4 cut(s)	213, 1537, 1564, 1629
BmrFI	CCNGG	3 cut(s)	209, 1533, 1746
BmrI	ACTGGG	1 cut(s)	1499
BmsI	GCATC	5 cut(s)	1180, 1509, 1613, 1957, 2092
BmtI	GCTAGC	1 cut(s)	1967
BmuI	ACTGGG	1 cut(s)	1499
BpiI	GAAGAC	3 cut(s)	214, 768, 981
BpmI	CTGGAG	1 cut(s)	587
Bpu10I	CCTNAGC	1 cut(s)	470
Bpu14I	TTCGAA	1 cut(s)	1169
BsaAI	YACGTR	2 cut(s)	753, 1651
BsaI	GGTCTC	3 cut(s)	60, 322, 410
BsaJI	CCNNGG	4 cut(s)	207, 658, 1531, 1896
BsaWI	WCCGGW	1 cut(s)	993
BsaXI	ACNNNNNCTCC	2 cut(s)	1925, 1955
Bsc4I	CCNNNNNNNGG	6 cut(s)	208, 354, 1081, 1082, 1545, 2079
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	3 cut(s)	811, 1378, 1494
Bse21I	CCTNAGG	1 cut(s)	2027
Bse3DI	GCAATG	6 cut(s)	54, 273, 1167, 2073, 2116, 2134
BseAI	TCCGGA	1 cut(s)	993
BseBI	CCWGG	3 cut(s)	209, 1533, 1746
BseDI	CCNNGG	4 cut(s)	207, 658, 1531, 1896
BseGI	GGATG	6 cut(s)	147, 396, 421, 1070, 1119, 1604
BseLI	CCNNNNNNNGG	6 cut(s)	208, 354, 1081, 1082, 1545, 2079
BseMI	GCAATG	6 cut(s)	54, 273, 1167, 2073, 2116, 2134
BseMII	CTCAG	4 cut(s)	354, 1094, 1491, 2018
BseNI	ACTGG	3 cut(s)	811, 1378, 1494
BseRI	GAGGAG	3 cut(s)	584, 1400, 1743
BseX3I	CGGCCG	1 cut(s)	169
BseXI	GCAGC	3 cut(s)	201, 1044, 1627
BseYI	CCCAGC	4 cut(s)	386, 673, 1545, 2078
Bsh1236I	CGCG	1 cut(s)	254
Bsh1285I	CGRYCG	1 cut(s)	172
BshFI	GGCC	2 cut(s)	171, 648
BshNI	GGYRCC	1 cut(s)	1562
BsiEI	CGRYCG	1 cut(s)	172
BsiHKAI	GWGCWC	2 cut(s)	1369, 1449
BsiSI	CCGG	3 cut(s)	308, 368, 994
BslFI	GGGAC	3 cut(s)	94, 1736, 2054
BslI	CCNNNNNNNGG	6 cut(s)	208, 354, 1081, 1082, 1545, 2079
BsmAI	GTCTC	7 cut(s)	60, 179, 322, 353, 410, 1237, 1508
BsmBI	CGTCTC	2 cut(s)	179, 1508
BsmFI	GGGAC	3 cut(s)	94, 1736, 2054
BsmI	GAATGC	1 cut(s)	1218
BsnI	GGCC	2 cut(s)	171, 648
Bso31I	GGTCTC	3 cut(s)	60, 322, 410
Bsp119I	TTCGAA	1 cut(s)	1169
Bsp1286I	GDGCHC	2 cut(s)	1369, 1449
Bsp13I	TCCGGA	1 cut(s)	993
Bsp143I	GATC	6 cut(s)	438, 798, 903, 1465, 1758, 1815
BspACI	CCGC	8 cut(s)	168, 180, 183, 655, 1176, 1720, 1868, 1967
BspANI	GGCC	2 cut(s)	171, 648
BspCNI	CTCAG	4 cut(s)	355, 1093, 1492, 2019
BspEI	TCCGGA	1 cut(s)	993
BspFNI	CGCG	1 cut(s)	254
BspHI	TCATGA	2 cut(s)	1186, 1828
BspLI	GGNNCC	4 cut(s)	213, 1537, 1564, 1629
BspMI	ACCTGC	1 cut(s)	1244
BspOI	GCTAGC	1 cut(s)	1967
BspPI	GGATC	2 cut(s)	898, 1766
BspQI	GCTCTTC	1 cut(s)	987
BspT104I	TTCGAA	1 cut(s)	1169
BspT107I	GGYRCC	1 cut(s)	1562
BspTNI	GGTCTC	3 cut(s)	60, 322, 410
BsrBI	CCGCTC	1 cut(s)	185
BsrDI	GCAATG	6 cut(s)	54, 273, 1167, 2073, 2116, 2134
BsrFI	RCCGGY	1 cut(s)	367
BsrI	ACTGG	3 cut(s)	811, 1378, 1494
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	4 cut(s)	207, 658, 1531, 1896
BssMI	GATC	6 cut(s)	438, 798, 903, 1465, 1758, 1815
BssSI	CACGAG	1 cut(s)	1332
BssT1I	CCWWGG	2 cut(s)	658, 1896
Bst2BI	CACGAG	1 cut(s)	1332
Bst2UI	CCWGG	3 cut(s)	209, 1533, 1746
Bst4CI	ACNGT	2 cut(s)	1955, 2095
Bst6I	CTCTTC	2 cut(s)	987, 1686
BstAPI	GCANNNNNTGC	1 cut(s)	1259
BstBAI	YACGTR	2 cut(s)	753, 1651
BstBI	TTCGAA	1 cut(s)	1169
BstC8I	GCNNGC	8 cut(s)	187, 369, 650, 1057, 1483, 1681, 1866, 1965
BstDEI	CTNAG	7 cut(s)	363, 470, 792, 1080, 1102, 1500, 2027
BstF5I	GGATG	6 cut(s)	147, 396, 421, 1070, 1119, 1604
BstFNI	CGCG	1 cut(s)	254
BstH2I	RGCGCY	2 cut(s)	195, 674
BstHHI	GCGC	2 cut(s)	194, 673
BstKTI	GATC	6 cut(s)	441, 801, 906, 1468, 1761, 1818
BstMAI	GTCTC	7 cut(s)	60, 179, 322, 353, 410, 1237, 1508
BstMBI	GATC	6 cut(s)	438, 798, 903, 1465, 1758, 1815
BstMCI	CGRYCG	1 cut(s)	172
BstMWI	GCNNNNNNNGC	8 cut(s)	92, 191, 654, 1157, 1259, 1542, 1601, 1621
BstNI	CCWGG	3 cut(s)	209, 1533, 1746
BstNSI	RCATGY	5 cut(s)	54, 721, 830, 1059, 1784
BstSCI	CCNGG	3 cut(s)	207, 1531, 1744
BstSFI	CTRYAG	3 cut(s)	547, 1289, 1567
BstUI	CGCG	1 cut(s)	254
BstV1I	GCAGC	3 cut(s)	201, 1044, 1627
BstV2I	GAAGAC	3 cut(s)	214, 768, 981
BstX2I	RGATCY	1 cut(s)	903
BstYI	RGATCY	1 cut(s)	903
BstZI	CGGCCG	1 cut(s)	169
Bsu36I	CCTNAGG	1 cut(s)	2027
BsuRI	GGCC	2 cut(s)	171, 648
BtsCI	GGATG	6 cut(s)	147, 396, 421, 1070, 1119, 1604
BtsIMutI	CAGTG	3 cut(s)	1371, 1960, 2091
BveI	ACCTGC	1 cut(s)	1244
Cac8I	GCNNGC	8 cut(s)	187, 369, 650, 1057, 1483, 1681, 1866, 1965
CciI	TCATGA	2 cut(s)	1186, 1828
CfoI	GCGC	2 cut(s)	194, 673
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	2 cut(s)	211, 1893
CseI	GACGC	1 cut(s)	986
CsiI	ACCWGGT	1 cut(s)	1744
Csp6I	GTAC	1 cut(s)	1778
CviQI	GTAC	1 cut(s)	1778
DdeI	CTNAG	7 cut(s)	363, 470, 792, 1080, 1102, 1500, 2027
DpnI	GATC	6 cut(s)	440, 800, 905, 1467, 1760, 1817
DpnII	GATC	6 cut(s)	438, 798, 903, 1465, 1758, 1815
DraI	TTTAAA	1 cut(s)	1239
DrdI	GACNNNNNNGTC	1 cut(s)	218
DseDI	GACNNNNNNGTC	1 cut(s)	218
EaeI	YGGCCR	2 cut(s)	169, 646
EagI	CGGCCG	1 cut(s)	169
Eam1104I	CTCTTC	2 cut(s)	987, 1686
EarI	CTCTTC	2 cut(s)	987, 1686
EciI	GGCGGA	1 cut(s)	169
EclXI	CGGCCG	1 cut(s)	169
Eco130I	CCWWGG	2 cut(s)	658, 1896
Eco31I	GGTCTC	3 cut(s)	60, 322, 410
Eco47I	GGWCC	2 cut(s)	211, 1893
Eco47III	AGCGCT	1 cut(s)	672
Eco52I	CGGCCG	1 cut(s)	169
Eco57I	CTGAAG	5 cut(s)	764, 993, 1295, 1604, 1815
Eco81I	CCTNAGG	1 cut(s)	2027
EcoO109I	RGGNCCY	1 cut(s)	211
EcoRI	GAATTC	2 cut(s)	625, 820
EcoRII	CCWGG	3 cut(s)	207, 1531, 1744
EcoT14I	CCWWGG	2 cut(s)	658, 1896
EcoT22I	ATGCAT	2 cut(s)	56, 1460
ErhI	CCWWGG	2 cut(s)	658, 1896
Esp3I	CGTCTC	2 cut(s)	179, 1508
FalI	AAGNNNNNCTT	2 cut(s)	966, 998
FaqI	GGGAC	3 cut(s)	94, 1736, 2054
FauI	CCCGC	2 cut(s)	1713, 1861
FauNDI	CATATG	4 cut(s)	514, 643, 1305, 1716
FbaI	TGATCA	3 cut(s)	438, 798, 1815
FblI	GTMKAC	1 cut(s)	714
Fnu4HI	GCNGC	5 cut(s)	169, 183, 190, 1033, 1641
FokI	GGATG	6 cut(s)	134, 403, 428, 1057, 1106, 1591
Fsp4HI	GCNGC	5 cut(s)	169, 183, 190, 1033, 1641
FspBI	CTAG	3 cut(s)	1592, 1674, 1964
GlaI	GCGC	2 cut(s)	193, 672
GluI	GCNGC	5 cut(s)	169, 183, 190, 1033, 1641
GsaI	CCCAGC	4 cut(s)	390, 677, 1549, 2082
GsuI	CTGGAG	1 cut(s)	587
HaeII	RGCGCY	2 cut(s)	195, 674
HaeIII	GGCC	2 cut(s)	171, 648
HapII	CCGG	3 cut(s)	308, 368, 994
HgaI	GACGC	1 cut(s)	986
HhaI	GCGC	2 cut(s)	194, 673
Hin6I	GCGC	2 cut(s)	192, 671
HinP1I	GCGC	2 cut(s)	192, 671
HincII	GTYRAC	1 cut(s)	715
HindII	GTYRAC	1 cut(s)	715
HindIII	AAGCTT	1 cut(s)	28
HinfI	GANTC	6 cut(s)	260, 509, 1093, 1283, 1506, 1913
HpaII	CCGG	3 cut(s)	308, 368, 994
HphI	GGTGA	8 cut(s)	464, 535, 604, 616, 1153, 1505, 1777, 2029
Hpy166II	GTNNAC	4 cut(s)	526, 715, 723, 776
Hpy188I	TCNGA	5 cut(s)	45, 973, 1117, 1314, 1395
Hpy188III	TCNNGA	9 cut(s)	407, 566, 686, 899, 914, 994, 1187, 1513, 1829
Hpy8I	GTNNAC	4 cut(s)	526, 715, 723, 776
HpyAV	CCTTC	8 cut(s)	50, 125, 132, 205, 238, 1134, 1191, 1408
HpyCH4III	ACNGT	2 cut(s)	1955, 2095
HpyCH4IV	ACGT	4 cut(s)	102, 752, 1006, 1650
HpyF10VI	GCNNNNNNNGC	8 cut(s)	92, 191, 654, 1157, 1259, 1542, 1601, 1621
HpyF3I	CTNAG	7 cut(s)	363, 470, 792, 1080, 1102, 1500, 2027
HpySE526I	ACGT	4 cut(s)	102, 752, 1006, 1650
HspAI	GCGC	2 cut(s)	192, 671
Kpn2I	TCCGGA	1 cut(s)	993
KroI	GCCGGC	1 cut(s)	367
KroNI	GCCGGC	1 cut(s)	369
Ksp22I	TGATCA	3 cut(s)	438, 798, 1815
Kzo9I	GATC	6 cut(s)	438, 798, 903, 1465, 1758, 1815
LguI	GCTCTTC	1 cut(s)	987
LmnI	GCTCC	2 cut(s)	1541, 1648
Lsp1109I	GCAGC	3 cut(s)	201, 1044, 1627
LweI	GCATC	5 cut(s)	1180, 1509, 1613, 1957, 2092
MabI	ACCWGGT	1 cut(s)	1744
MaeI	CTAG	3 cut(s)	1592, 1674, 1964
MaeII	ACGT	4 cut(s)	102, 752, 1006, 1650
MaeIII	GTNAC	3 cut(s)	538, 1013, 1336
MalI	GATC	6 cut(s)	440, 800, 905, 1467, 1760, 1817
MbiI	CCGCTC	1 cut(s)	185
MboI	GATC	6 cut(s)	438, 798, 903, 1465, 1758, 1815
MfeI	CAATTG	1 cut(s)	476
MflI	RGATCY	1 cut(s)	903
MhlI	GDGCHC	2 cut(s)	1369, 1449
MlsI	TGGCCA	1 cut(s)	648
MluNI	TGGCCA	1 cut(s)	648
MlyI	GAGTC	1 cut(s)	269
MmeI	TCCRAC	2 cut(s)	162, 1736
Mox20I	TGGCCA	1 cut(s)	648
Mph1103I	ATGCAT	2 cut(s)	56, 1460
MroI	TCCGGA	1 cut(s)	993
MroNI	GCCGGC	1 cut(s)	367
MroXI	GAANNNNTTC	2 cut(s)	8, 1400
MscI	TGGCCA	1 cut(s)	648
MseI	TTAA	5 cut(s)	243, 842, 1238, 1886, 2124
MslI	CAYNNNNRTG	2 cut(s)	751, 1953
Msp20I	TGGCCA	1 cut(s)	648
MspA1I	CMGCKG	1 cut(s)	1624
MspI	CCGG	3 cut(s)	308, 368, 994
MspR9I	CCNGG	3 cut(s)	209, 1533, 1746
MunI	CAATTG	1 cut(s)	476
Mva1269I	GAATGC	1 cut(s)	1218
MvaI	CCWGG	3 cut(s)	209, 1533, 1746
MvnI	CGCG	1 cut(s)	254
MwoI	GCNNNNNNNGC	8 cut(s)	92, 191, 654, 1157, 1259, 1542, 1601, 1621
NaeI	GCCGGC	1 cut(s)	369
NdeI	CATATG	4 cut(s)	514, 643, 1305, 1716
NdeII	GATC	6 cut(s)	438, 798, 903, 1465, 1758, 1815
NgoMIV	GCCGGC	1 cut(s)	367
NheI	GCTAGC	1 cut(s)	1963
NlaIV	GGNNCC	4 cut(s)	213, 1537, 1564, 1629
NmuCI	GTSAC	1 cut(s)	1013
NsiI	ATGCAT	2 cut(s)	56, 1460
NspI	RCATGY	5 cut(s)	54, 721, 830, 1059, 1784
NspV	TTCGAA	1 cut(s)	1169
PaeI	GCATGC	1 cut(s)	1059
PagI	TCATGA	2 cut(s)	1186, 1828
PciI	ACATGT	2 cut(s)	717, 1780
PciSI	GCTCTTC	1 cut(s)	987
PcsI	WCGNNNNNNNCGW	2 cut(s)	99, 1474
PctI	GAATGC	1 cut(s)	1218
PdiI	GCCGGC	1 cut(s)	369
PdmI	GAANNNNTTC	2 cut(s)	8, 1400
PfeI	GAWTC	5 cut(s)	509, 1093, 1283, 1506, 1913
PflFI	GACNNNGTC	1 cut(s)	314
PflMI	CCANNNNNTGG	1 cut(s)	1545
PkrI	GCNGC	5 cut(s)	170, 184, 191, 1034, 1642
PleI	GAGTC	1 cut(s)	268
PpsI	GAGTC	1 cut(s)	268
Ppu21I	YACGTR	2 cut(s)	753, 1651
PpuMI	RGGWCCY	1 cut(s)	211
PscI	ACATGT	2 cut(s)	717, 1780
PshBI	ATTAAT	1 cut(s)	243
PsiI	TTATAA	1 cut(s)	324
Psp5II	RGGWCCY	1 cut(s)	211
Psp6I	CCWGG	3 cut(s)	207, 1531, 1744
PspFI	CCCAGC	4 cut(s)	386, 673, 1545, 2078
PspGI	CCWGG	3 cut(s)	207, 1531, 1744
PspN4I	GGNNCC	4 cut(s)	213, 1537, 1564, 1629
PspPI	GGNCC	2 cut(s)	211, 1893
PspPPI	RGGWCCY	1 cut(s)	211
PsuI	RGATCY	1 cut(s)	903
PsyI	GACNNNGTC	1 cut(s)	314
PvuII	CAGCTG	1 cut(s)	1624
RsaI	GTAC	1 cut(s)	1779
RsaNI	GTAC	1 cut(s)	1778
RseI	CAYNNNNRTG	2 cut(s)	751, 1953
SalI	GTCGAC	1 cut(s)	713
SapI	GCTCTTC	1 cut(s)	987
SaqAI	TTAA	5 cut(s)	243, 842, 1238, 1886, 2124
SatI	GCNGC	5 cut(s)	169, 183, 190, 1033, 1641
Sau3AI	GATC	6 cut(s)	438, 798, 903, 1465, 1758, 1815
Sau96I	GGNCC	2 cut(s)	211, 1893
SchI	GAGTC	1 cut(s)	269
ScrFI	CCNGG	3 cut(s)	209, 1533, 1746
SduI	GDGCHC	2 cut(s)	1369, 1449
SexAI	ACCWGGT	1 cut(s)	1744
SfaNI	GCATC	5 cut(s)	1180, 1509, 1613, 1957, 2092
SfcI	CTRYAG	3 cut(s)	547, 1289, 1567
SfuI	TTCGAA	1 cut(s)	1169
SinI	GGWCC	2 cut(s)	211, 1893
SmiMI	CAYNNNNRTG	2 cut(s)	751, 1953
SphI	GCATGC	1 cut(s)	1059
SsiI	CCGC	8 cut(s)	168, 180, 183, 655, 1176, 1720, 1868, 1967
SspI	AATATT	1 cut(s)	1585
SspMI	CTAG	3 cut(s)	1592, 1674, 1964
StyD4I	CCNGG	3 cut(s)	207, 1531, 1744
StyI	CCWWGG	2 cut(s)	658, 1896
TaaI	ACNGT	2 cut(s)	1955, 2095
TaiI	ACGT	4 cut(s)	105, 755, 1009, 1653
TaqI	TCGA	9 cut(s)	198, 408, 629, 714, 1169, 1477, 1512, 1761, 1850
TauI	GCSGC	2 cut(s)	171, 185
TfiI	GAWTC	5 cut(s)	509, 1093, 1283, 1506, 1913
Tru1I	TTAA	5 cut(s)	243, 842, 1238, 1886, 2124
Tru9I	TTAA	5 cut(s)	243, 842, 1238, 1886, 2124
TscAI	CASTG	3 cut(s)	1378, 1960, 2098
TseFI	GTSAC	1 cut(s)	1013
TseI	GCWGC	3 cut(s)	189, 1032, 1640
Tsp45I	GTSAC	1 cut(s)	1013
TspGWI	ACGGA	1 cut(s)	2145
TspRI	CASTG	3 cut(s)	1378, 1960, 2098
Tth111I	GACNNNGTC	1 cut(s)	314
Van91I	CCANNNNNTGG	1 cut(s)	1545
VpaK11BI	GGWCC	2 cut(s)	211, 1893
VspI	ATTAAT	1 cut(s)	243
XapI	RAATTY	7 cut(s)	297, 625, 820, 1134, 1240, 1800, 1824
XceI	RCATGY	5 cut(s)	54, 721, 830, 1059, 1784
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1752
XmiI	GTMKAC	1 cut(s)	714
XmnI	GAANNNNTTC	2 cut(s)	8, 1400
XspI	CTAG	3 cut(s)	1592, 1674, 1964
Zsp2I	ATGCAT	2 cut(s)	56, 1460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.