MADS-box transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22630 AT2G22630 AT4G37940 AT4G37940 AT4G37940 AT4G37940 |
| fragaria_vesca | FvH4_1g19110 FvH4_1g19110 |
| malus_domestica | MD01G1043900.v1.1 MD15G1307400.v1.1 |
| prunus_persica | Prupe.6G208900_v2.0.a1 |
| pyrus_communis | pycom01g07090 |
| rosa_chinensis | RchiOBHm_Chr2g0110101 |
| rosa_laevigata | RLG00000017789 |
| rosa_roxburghii | Rroxscaffold_2G00133720 |
| rosa_rugosa | Rorug02G0165700 |
| rosa_samantha | Rh2AG217500 Rh2BG227700 Rh2CG219700 Rh2DG223300 |
| rosa_wichuraiana | Rw2G016810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 606 |
| AclWI | GGATC | 2 cut(s) | 16, 38 |
| AcsI | RAATTY | 2 cut(s) | 487, 529 |
| AcuI | CTGAAG | 1 cut(s) | 595 |
| AfaI | GTAC | 2 cut(s) | 43, 500 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 288 |
| AgsI | TTSAA | 2 cut(s) | 418, 449 |
| AluBI | AGCT | 5 cut(s) | 160, 343, 367, 522, 615 |
| AluI | AGCT | 5 cut(s) | 160, 343, 367, 522, 615 |
| Alw21I | GWGCWC | 1 cut(s) | 572 |
| AlwI | GGATC | 2 cut(s) | 16, 38 |
| ApoI | RAATTY | 2 cut(s) | 487, 529 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 574, 606 |
| AsuHPI | GGTGA | 1 cut(s) | 271 |
| BbsI | GAAGAC | 1 cut(s) | 456 |
| Bbv12I | GWGCWC | 1 cut(s) | 572 |
| BccI | CCATC | 3 cut(s) | 290, 327, 610 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 392, 426, 531, 565 |
| BclI | TGATCA | 1 cut(s) | 84 |
| BfaI | CTAG | 1 cut(s) | 377 |
| BfmI | CTRYAG | 2 cut(s) | 299, 401 |
| BmsI | GCATC | 2 cut(s) | 109, 257 |
| BpiI | GAAGAC | 1 cut(s) | 456 |
| BpuEI | CTTGAG | 1 cut(s) | 130 |
| Bsa29I | ATCGAT | 1 cut(s) | 33 |
| BsaBI | GATNNNNATC | 1 cut(s) | 20 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 288 |
| Bse1I | ACTGG | 1 cut(s) | 157 |
| Bse8I | GATNNNNATC | 1 cut(s) | 20 |
| BseCI | ATCGAT | 1 cut(s) | 33 |
| BseGI | GGATG | 1 cut(s) | 602 |
| BseJI | GATNNNNATC | 1 cut(s) | 20 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 288 |
| BseNI | ACTGG | 1 cut(s) | 157 |
| BseRI | GAGGAG | 1 cut(s) | 601 |
| BshVI | ATCGAT | 1 cut(s) | 33 |
| BsiHKAI | GWGCWC | 1 cut(s) | 572 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 288 |
| BsmI | GAATGC | 1 cut(s) | 552 |
| Bsp1286I | GDGCHC | 1 cut(s) | 572 |
| Bsp1407I | TGTACA | 1 cut(s) | 498 |
| Bsp143I | GATC | 4 cut(s) | 21, 30, 84, 138 |
| BspACI | CCGC | 1 cut(s) | 606 |
| BspDI | ATCGAT | 1 cut(s) | 33 |
| BspMAI | CTGCAG | 1 cut(s) | 405 |
| BspPI | GGATC | 2 cut(s) | 16, 38 |
| BsrGI | TGTACA | 1 cut(s) | 498 |
| BsrI | ACTGG | 1 cut(s) | 157 |
| BssMI | GATC | 4 cut(s) | 21, 30, 84, 138 |
| Bst4CI | ACNGT | 1 cut(s) | 498 |
| BstAUI | TGTACA | 1 cut(s) | 498 |
| BstC8I | GCNNGC | 1 cut(s) | 50 |
| BstF5I | GGATG | 1 cut(s) | 602 |
| BstKTI | GATC | 4 cut(s) | 24, 33, 87, 141 |
| BstMBI | GATC | 4 cut(s) | 21, 30, 84, 138 |
| BstSFI | CTRYAG | 2 cut(s) | 299, 401 |
| BstV2I | GAAGAC | 1 cut(s) | 456 |
| Bsu15I | ATCGAT | 1 cut(s) | 33 |
| BsuTUI | ATCGAT | 1 cut(s) | 33 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsCI | GGATG | 1 cut(s) | 602 |
| BtsIMutI | CAGTG | 1 cut(s) | 150 |
| Cac8I | GCNNGC | 1 cut(s) | 50 |
| ClaI | ATCGAT | 1 cut(s) | 33 |
| Csp6I | GTAC | 2 cut(s) | 42, 499 |
| CviAII | CATG | 3 cut(s) | 184, 331, 565 |
| CviJI | RGCY | 5 cut(s) | 160, 343, 367, 522, 615 |
| CviKI_1 | RGCY | 5 cut(s) | 160, 343, 367, 522, 615 |
| CviQI | GTAC | 2 cut(s) | 42, 499 |
| DpnI | GATC | 4 cut(s) | 23, 32, 86, 140 |
| DpnII | GATC | 4 cut(s) | 21, 30, 84, 138 |
| EciI | GGCGGA | 1 cut(s) | 595 |
| Eco57I | CTGAAG | 1 cut(s) | 595 |
| EcoRI | GAATTC | 1 cut(s) | 529 |
| FaeI | CATG | 3 cut(s) | 187, 334, 568 |
| FaiI | YATR | 7 cut(s) | 115, 165, 185, 197, 207, 332, 566 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 117, 149 |
| FatI | CATG | 3 cut(s) | 183, 330, 564 |
| FbaI | TGATCA | 1 cut(s) | 84 |
| FokI | GGATG | 1 cut(s) | 589 |
| FspBI | CTAG | 1 cut(s) | 377 |
| Hin1II | CATG | 3 cut(s) | 187, 334, 568 |
| HincII | GTYRAC | 1 cut(s) | 435 |
| HindII | GTYRAC | 1 cut(s) | 435 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 3 cut(s) | 355, 397, 589 |
| HpaI | GTTAAC | 1 cut(s) | 435 |
| HphI | GGTGA | 1 cut(s) | 271 |
| Hpy166II | GTNNAC | 1 cut(s) | 435 |
| Hpy188I | TCNGA | 4 cut(s) | 26, 138, 253, 535 |
| Hpy188III | TCNNGA | 2 cut(s) | 88, 377 |
| Hpy8I | GTNNAC | 1 cut(s) | 435 |
| HpyAV | CCTTC | 4 cut(s) | 21, 70, 85, 499 |
| HpyCH4III | ACNGT | 1 cut(s) | 498 |
| HpyCH4V | TGCA | 5 cut(s) | 122, 173, 403, 552, 578 |
| Hsp92II | CATG | 3 cut(s) | 187, 334, 568 |
| Ksp22I | TGATCA | 1 cut(s) | 84 |
| KspAI | GTTAAC | 1 cut(s) | 435 |
| Kzo9I | GATC | 4 cut(s) | 21, 30, 84, 138 |
| LmnI | GCTCC | 2 cut(s) | 292, 527 |
| LpnPI | CCDG | 6 cut(s) | 34, 138, 242, 258, 389, 539 |
| LweI | GCATC | 2 cut(s) | 109, 257 |
| MaeI | CTAG | 1 cut(s) | 377 |
| MaeIII | GTNAC | 4 cut(s) | 55, 176, 277, 590 |
| MalI | GATC | 4 cut(s) | 23, 32, 86, 140 |
| MboI | GATC | 4 cut(s) | 21, 30, 84, 138 |
| MboII | GAAGA | 3 cut(s) | 25, 133, 461 |
| MhlI | GDGCHC | 1 cut(s) | 572 |
| MluCI | AATT | 7 cut(s) | 37, 188, 386, 444, 469, 487, 529 |
| MlyI | GAGTC | 3 cut(s) | 349, 406, 598 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MnlI | CCTC | 2 cut(s) | 214, 579 |
| MseI | TTAA | 3 cut(s) | 240, 360, 434 |
| Mva1269I | GAATGC | 1 cut(s) | 552 |
| NdeII | GATC | 4 cut(s) | 21, 30, 84, 138 |
| NlaIII | CATG | 3 cut(s) | 187, 334, 568 |
| NmuCI | GTSAC | 3 cut(s) | 55, 277, 590 |
| PctI | GAATGC | 1 cut(s) | 552 |
| PleI | GAGTC | 3 cut(s) | 349, 405, 597 |
| PpsI | GAGTC | 3 cut(s) | 349, 405, 597 |
| PstI | CTGCAG | 1 cut(s) | 405 |
| RsaI | GTAC | 2 cut(s) | 43, 500 |
| RsaNI | GTAC | 2 cut(s) | 42, 499 |
| SaqAI | TTAA | 3 cut(s) | 240, 360, 434 |
| Sau3AI | GATC | 4 cut(s) | 21, 30, 84, 138 |
| SchI | GAGTC | 3 cut(s) | 349, 406, 598 |
| SduI | GDGCHC | 1 cut(s) | 572 |
| SetI | ASST | 7 cut(s) | 162, 345, 369, 456, 510, 524, 617 |
| SfaNI | GCATC | 2 cut(s) | 109, 257 |
| SfcI | CTRYAG | 2 cut(s) | 299, 401 |
| SmlI | CTYRAG | 1 cut(s) | 145 |
| SmoI | CTYRAG | 1 cut(s) | 145 |
| Sse9I | AATT | 7 cut(s) | 37, 188, 386, 444, 469, 487, 529 |
| SsiI | CCGC | 1 cut(s) | 606 |
| SspMI | CTAG | 1 cut(s) | 377 |
| TaaI | ACNGT | 1 cut(s) | 498 |
| TaqI | TCGA | 2 cut(s) | 33, 541 |
| TasI | AATT | 7 cut(s) | 37, 188, 386, 444, 469, 487, 529 |
| TatI | WGTACW | 1 cut(s) | 498 |
| Tru1I | TTAA | 3 cut(s) | 240, 360, 434 |
| Tru9I | TTAA | 3 cut(s) | 240, 360, 434 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TseFI | GTSAC | 3 cut(s) | 55, 277, 590 |
| Tsp45I | GTSAC | 3 cut(s) | 55, 277, 590 |
| TspDTI | ATGAA | 7 cut(s) | 180, 200, 272, 319, 456, 467, 474 |
| TspRI | CASTG | 1 cut(s) | 157 |
| XapI | RAATTY | 2 cut(s) | 487, 529 |
| XbaI | TCTAGA | 1 cut(s) | 376 |
| XspI | CTAG | 1 cut(s) | 377 |