MADS-box transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22630 AT2G22630 AT4G37940 AT4G37940 AT4G37940 AT4G37940 |
| fragaria_vesca | FvH4_1g19110 FvH4_1g19110 |
| malus_domestica | MD01G1043900.v1.1 MD15G1307400.v1.1 |
| prunus_persica | Prupe.6G208900_v2.0.a1 |
| pyrus_communis | pycom01g07090 |
| rosa_chinensis | RchiOBHm_Chr2g0110101 |
| rosa_laevigata | RLG00000017789 |
| rosa_roxburghii | Rroxscaffold_2G00133720 |
| rosa_rugosa | Rorug02G0165700 |
| rosa_samantha | Rh2AG217500 Rh2BG227700 Rh2CG219700 Rh2DG223300 |
| rosa_wichuraiana | Rw2G016810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 167 |
| AluBI | AGCT | 2 cut(s) | 103, 160 |
| AluI | AGCT | 2 cut(s) | 103, 160 |
| ApoI | RAATTY | 1 cut(s) | 167 |
| BccI | CCATC | 1 cut(s) | 193 |
| BmsI | GCATC | 1 cut(s) | 109 |
| BpuEI | CTTGAG | 1 cut(s) | 130 |
| Bsa29I | ATCGAT | 1 cut(s) | 33 |
| BseCI | ATCGAT | 1 cut(s) | 33 |
| BshVI | ATCGAT | 1 cut(s) | 33 |
| Bsp143I | GATC | 2 cut(s) | 30, 138 |
| BspDI | ATCGAT | 1 cut(s) | 33 |
| BspHI | TCATGA | 1 cut(s) | 187 |
| BssMI | GATC | 2 cut(s) | 30, 138 |
| BstC8I | GCNNGC | 3 cut(s) | 50, 105, 175 |
| BstKTI | GATC | 2 cut(s) | 33, 141 |
| BstMBI | GATC | 2 cut(s) | 30, 138 |
| Bsu15I | ATCGAT | 1 cut(s) | 33 |
| BsuTUI | ATCGAT | 1 cut(s) | 33 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| Cac8I | GCNNGC | 3 cut(s) | 50, 105, 175 |
| CciI | TCATGA | 1 cut(s) | 187 |
| ClaI | ATCGAT | 1 cut(s) | 33 |
| CviAII | CATG | 2 cut(s) | 188, 196 |
| CviJI | RGCY | 2 cut(s) | 103, 160 |
| CviKI_1 | RGCY | 2 cut(s) | 103, 160 |
| DpnI | GATC | 2 cut(s) | 32, 140 |
| DpnII | GATC | 2 cut(s) | 30, 138 |
| FaeI | CATG | 2 cut(s) | 191, 199 |
| FaiI | YATR | 3 cut(s) | 165, 189, 197 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 117, 149 |
| FatI | CATG | 2 cut(s) | 187, 195 |
| Hin1II | CATG | 2 cut(s) | 191, 199 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 1 cut(s) | 22 |
| Hpy188I | TCNGA | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 1 cut(s) | 188 |
| Hpy99I | CGWCG | 1 cut(s) | 46 |
| HpyAV | CCTTC | 3 cut(s) | 70, 85, 185 |
| HpyCH4V | TGCA | 2 cut(s) | 122, 173 |
| Hsp92II | CATG | 2 cut(s) | 191, 199 |
| Kzo9I | GATC | 2 cut(s) | 30, 138 |
| LpnPI | CCDG | 3 cut(s) | 34, 89, 166 |
| LweI | GCATC | 1 cut(s) | 109 |
| MaeIII | GTNAC | 1 cut(s) | 55 |
| MalI | GATC | 2 cut(s) | 32, 140 |
| MboI | GATC | 2 cut(s) | 30, 138 |
| MboII | GAAGA | 3 cut(s) | 25, 40, 133 |
| MluCI | AATT | 3 cut(s) | 37, 84, 167 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MseI | TTAA | 2 cut(s) | 83, 87 |
| NdeII | GATC | 2 cut(s) | 30, 138 |
| NlaIII | CATG | 2 cut(s) | 191, 199 |
| NmuCI | GTSAC | 1 cut(s) | 55 |
| PacI | TTAATTAA | 1 cut(s) | 87 |
| PagI | TCATGA | 1 cut(s) | 187 |
| PfeI | GAWTC | 1 cut(s) | 22 |
| SaqAI | TTAA | 2 cut(s) | 83, 87 |
| Sau3AI | GATC | 2 cut(s) | 30, 138 |
| SetI | ASST | 2 cut(s) | 105, 162 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SgeI | CNNG | 9 cut(s) | 57, 61, 65, 116, 146, 159, 186, 193, 200 |
| SmlI | CTYRAG | 1 cut(s) | 145 |
| SmoI | CTYRAG | 1 cut(s) | 145 |
| Sse9I | AATT | 3 cut(s) | 37, 84, 167 |
| TaqI | TCGA | 2 cut(s) | 33, 41 |
| TasI | AATT | 3 cut(s) | 37, 84, 167 |
| TfiI | GAWTC | 1 cut(s) | 22 |
| Tru1I | TTAA | 2 cut(s) | 83, 87 |
| Tru9I | TTAA | 2 cut(s) | 83, 87 |
| TseFI | GTSAC | 1 cut(s) | 55 |
| Tsp45I | GTSAC | 1 cut(s) | 55 |
| TspDTI | ATGAA | 3 cut(s) | 176, 180, 204 |
| XapI | RAATTY | 1 cut(s) | 167 |