MADS-box transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22630 AT2G22630 AT4G37940 AT4G37940 AT4G37940 AT4G37940 |
| fragaria_vesca | FvH4_1g19110 FvH4_1g19110 |
| malus_domestica | MD01G1043900.v1.1 MD15G1307400.v1.1 |
| prunus_persica | Prupe.6G208900_v2.0.a1 |
| pyrus_communis | pycom01g07090 |
| rosa_chinensis | RchiOBHm_Chr2g0110101 |
| rosa_laevigata | RLG00000017789 |
| rosa_roxburghii | Rroxscaffold_2G00133720 |
| rosa_rugosa | Rorug02G0165700 |
| rosa_samantha | Rh2AG217500 Rh2BG227700 Rh2CG219700 Rh2DG223300 |
| rosa_wichuraiana | Rw2G016810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 16 |
| AcsI | RAATTY | 2 cut(s) | 408, 469 |
| AcuI | CTGAAG | 1 cut(s) | 587 |
| AfaI | GTAC | 2 cut(s) | 43, 500 |
| AfeI | AGCGCT | 1 cut(s) | 523 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 288, 289, 539 |
| AgsI | TTSAA | 1 cut(s) | 449 |
| AluBI | AGCT | 5 cut(s) | 160, 343, 367, 607, 617 |
| AluI | AGCT | 5 cut(s) | 160, 343, 367, 607, 617 |
| Alw21I | GWGCWC | 1 cut(s) | 572 |
| AlwI | GGATC | 1 cut(s) | 16 |
| Aor51HI | AGCGCT | 1 cut(s) | 523 |
| ApoI | RAATTY | 2 cut(s) | 408, 469 |
| AspLEI | GCGC | 1 cut(s) | 524 |
| AsuHPI | GGTGA | 1 cut(s) | 271 |
| BbsI | GAAGAC | 1 cut(s) | 456 |
| Bbv12I | GWGCWC | 1 cut(s) | 572 |
| BccI | CCATC | 1 cut(s) | 602 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 392, 426 |
| BfaI | CTAG | 2 cut(s) | 147, 377 |
| BfmI | CTRYAG | 2 cut(s) | 299, 401 |
| BfoI | RGCGCY | 1 cut(s) | 525 |
| BlpI | GCTNAGC | 1 cut(s) | 608 |
| BmrI | ACTGGG | 1 cut(s) | 162 |
| BmsI | GCATC | 2 cut(s) | 109, 257 |
| BmuI | ACTGGG | 1 cut(s) | 162 |
| BpiI | GAAGAC | 1 cut(s) | 456 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 608 |
| BsaBI | GATNNNNATC | 1 cut(s) | 20 |
| BsaJI | CCNNGG | 1 cut(s) | 216 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 288, 289, 539 |
| Bse118I | RCCGGY | 1 cut(s) | 321 |
| Bse1I | ACTGG | 1 cut(s) | 157 |
| Bse8I | GATNNNNATC | 1 cut(s) | 20 |
| BseDI | CCNNGG | 1 cut(s) | 216 |
| BseGI | GGATG | 1 cut(s) | 594 |
| BseJI | GATNNNNATC | 1 cut(s) | 20 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 288, 289, 539 |
| BseNI | ACTGG | 1 cut(s) | 157 |
| BseRI | GAGGAG | 1 cut(s) | 593 |
| BsiHKAI | GWGCWC | 1 cut(s) | 572 |
| BsiSI | CCGG | 1 cut(s) | 322 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 288, 289, 539 |
| Bsp1286I | GDGCHC | 1 cut(s) | 572 |
| Bsp1407I | TGTACA | 1 cut(s) | 498 |
| Bsp143I | GATC | 3 cut(s) | 15, 21, 138 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 608 |
| BspMAI | CTGCAG | 1 cut(s) | 405 |
| BspPI | GGATC | 1 cut(s) | 16 |
| BsrFI | RCCGGY | 1 cut(s) | 321 |
| BsrGI | TGTACA | 1 cut(s) | 498 |
| BsrI | ACTGG | 1 cut(s) | 157 |
| BssAI | RCCGGY | 1 cut(s) | 321 |
| BssECI | CCNNGG | 1 cut(s) | 216 |
| BssMI | GATC | 3 cut(s) | 15, 21, 138 |
| BssT1I | CCWWGG | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 1 cut(s) | 498 |
| BstAUI | TGTACA | 1 cut(s) | 498 |
| BstC8I | GCNNGC | 1 cut(s) | 50 |
| BstDEI | CTNAG | 1 cut(s) | 608 |
| BstF5I | GGATG | 1 cut(s) | 594 |
| BstH2I | RGCGCY | 1 cut(s) | 525 |
| BstHHI | GCGC | 1 cut(s) | 524 |
| BstKTI | GATC | 3 cut(s) | 18, 24, 141 |
| BstMBI | GATC | 3 cut(s) | 15, 21, 138 |
| BstSFI | CTRYAG | 2 cut(s) | 299, 401 |
| BstV2I | GAAGAC | 1 cut(s) | 456 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsCI | GGATG | 1 cut(s) | 594 |
| BtsIMutI | CAGTG | 1 cut(s) | 150 |
| Cac8I | GCNNGC | 1 cut(s) | 50 |
| CfoI | GCGC | 1 cut(s) | 524 |
| Cfr10I | RCCGGY | 1 cut(s) | 321 |
| Csp6I | GTAC | 2 cut(s) | 42, 499 |
| CviAII | CATG | 3 cut(s) | 184, 331, 565 |
| CviJI | RGCY | 6 cut(s) | 160, 343, 367, 607, 612, 617 |
| CviKI_1 | RGCY | 6 cut(s) | 160, 343, 367, 607, 612, 617 |
| CviQI | GTAC | 2 cut(s) | 42, 499 |
| DdeI | CTNAG | 1 cut(s) | 608 |
| DpnI | GATC | 3 cut(s) | 17, 23, 140 |
| DpnII | GATC | 3 cut(s) | 15, 21, 138 |
| Eco130I | CCWWGG | 1 cut(s) | 216 |
| Eco47III | AGCGCT | 1 cut(s) | 523 |
| Eco57I | CTGAAG | 1 cut(s) | 587 |
| EcoRI | GAATTC | 1 cut(s) | 408 |
| EcoT14I | CCWWGG | 1 cut(s) | 216 |
| ErhI | CCWWGG | 1 cut(s) | 216 |
| FaeI | CATG | 3 cut(s) | 187, 334, 568 |
| FaiI | YATR | 9 cut(s) | 115, 165, 185, 197, 207, 332, 359, 491, 566 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 117, 149 |
| FatI | CATG | 3 cut(s) | 183, 330, 564 |
| FokI | GGATG | 1 cut(s) | 581 |
| FspBI | CTAG | 2 cut(s) | 147, 377 |
| GlaI | GCGC | 1 cut(s) | 523 |
| HaeII | RGCGCY | 1 cut(s) | 525 |
| HapII | CCGG | 1 cut(s) | 322 |
| HhaI | GCGC | 1 cut(s) | 524 |
| Hin1II | CATG | 3 cut(s) | 187, 334, 568 |
| Hin6I | GCGC | 1 cut(s) | 522 |
| HinP1I | GCGC | 1 cut(s) | 522 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 2 cut(s) | 529, 581 |
| HpaII | CCGG | 1 cut(s) | 322 |
| HphI | GGTGA | 1 cut(s) | 271 |
| Hpy188I | TCNGA | 5 cut(s) | 26, 138, 253, 417, 528 |
| Hpy188III | TCNNGA | 3 cut(s) | 19, 377, 533 |
| HpyAV | CCTTC | 7 cut(s) | 21, 70, 85, 91, 457, 499, 611 |
| HpyCH4III | ACNGT | 1 cut(s) | 498 |
| HpyCH4V | TGCA | 3 cut(s) | 122, 173, 403 |
| HpyF3I | CTNAG | 1 cut(s) | 608 |
| Hsp92II | CATG | 3 cut(s) | 187, 334, 568 |
| HspAI | GCGC | 1 cut(s) | 522 |
| Kzo9I | GATC | 3 cut(s) | 15, 21, 138 |
| LmnI | GCTCC | 1 cut(s) | 292 |
| LpnPI | CCDG | 6 cut(s) | 34, 138, 242, 258, 335, 389 |
| LweI | GCATC | 2 cut(s) | 109, 257 |
| MaeI | CTAG | 2 cut(s) | 147, 377 |
| MaeIII | GTNAC | 4 cut(s) | 55, 176, 277, 582 |
| MalI | GATC | 3 cut(s) | 17, 23, 140 |
| MboI | GATC | 3 cut(s) | 15, 21, 138 |
| MboII | GAAGA | 4 cut(s) | 18, 25, 133, 461 |
| MhlI | GDGCHC | 1 cut(s) | 572 |
| MluCI | AATT | 6 cut(s) | 37, 188, 386, 408, 444, 469 |
| MlyI | GAGTC | 1 cut(s) | 590 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MnlI | CCTC | 3 cut(s) | 214, 293, 571 |
| MseI | TTAA | 4 cut(s) | 87, 240, 353, 631 |
| MspI | CCGG | 1 cut(s) | 322 |
| NdeII | GATC | 3 cut(s) | 15, 21, 138 |
| NlaIII | CATG | 3 cut(s) | 187, 334, 568 |
| NmuCI | GTSAC | 3 cut(s) | 55, 277, 582 |
| PfeI | GAWTC | 1 cut(s) | 529 |
| PleI | GAGTC | 1 cut(s) | 589 |
| PpsI | GAGTC | 1 cut(s) | 589 |
| PstI | CTGCAG | 1 cut(s) | 405 |
| RsaI | GTAC | 2 cut(s) | 43, 500 |
| RsaNI | GTAC | 2 cut(s) | 42, 499 |
| SaqAI | TTAA | 4 cut(s) | 87, 240, 353, 631 |
| Sau3AI | GATC | 3 cut(s) | 15, 21, 138 |
| SchI | GAGTC | 1 cut(s) | 590 |
| SduI | GDGCHC | 1 cut(s) | 572 |
| SetI | ASST | 8 cut(s) | 162, 345, 369, 456, 510, 603, 609, 619 |
| SfaNI | GCATC | 2 cut(s) | 109, 257 |
| SfcI | CTRYAG | 2 cut(s) | 299, 401 |
| Sse9I | AATT | 6 cut(s) | 37, 188, 386, 408, 444, 469 |
| SspI | AATATT | 1 cut(s) | 432 |
| SspMI | CTAG | 2 cut(s) | 147, 377 |
| StyI | CCWWGG | 1 cut(s) | 216 |
| TaaI | ACNGT | 1 cut(s) | 498 |
| TaqII | GACCGA | 1 cut(s) | 452 |
| TasI | AATT | 6 cut(s) | 37, 188, 386, 408, 444, 469 |
| TatI | WGTACW | 1 cut(s) | 498 |
| TfiI | GAWTC | 1 cut(s) | 529 |
| Tru1I | TTAA | 4 cut(s) | 87, 240, 353, 631 |
| Tru9I | TTAA | 4 cut(s) | 87, 240, 353, 631 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TseFI | GTSAC | 3 cut(s) | 55, 277, 582 |
| Tsp45I | GTSAC | 3 cut(s) | 55, 277, 582 |
| TspDTI | ATGAA | 6 cut(s) | 180, 200, 272, 319, 456, 467 |
| TspRI | CASTG | 1 cut(s) | 157 |
| XapI | RAATTY | 2 cut(s) | 408, 469 |
| XbaI | TCTAGA | 1 cut(s) | 376 |
| XspI | CTAG | 2 cut(s) | 147, 377 |