MADS-box transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22630 AT2G22630 AT4G37940 AT4G37940 AT4G37940 AT4G37940 |
| fragaria_vesca | FvH4_1g19110 FvH4_1g19110 |
| malus_domestica | MD01G1043900.v1.1 MD15G1307400.v1.1 |
| prunus_persica | Prupe.6G208900_v2.0.a1 |
| pyrus_communis | pycom01g07090 |
| rosa_chinensis | RchiOBHm_Chr2g0110101 |
| rosa_laevigata | RLG00000017789 |
| rosa_roxburghii | Rroxscaffold_2G00133720 |
| rosa_rugosa | Rorug02G0165700 |
| rosa_samantha | Rh2AG217500 Rh2BG227700 Rh2CG219700 Rh2DG223300 |
| rosa_wichuraiana | Rw2G016810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 549 |
| AclWI | GGATC | 1 cut(s) | 38 |
| AcsI | RAATTY | 4 cut(s) | 167, 187, 408, 529 |
| AcuI | CTGAAG | 1 cut(s) | 234 |
| AfaI | GTAC | 2 cut(s) | 500, 591 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 288 |
| AflII | CTTAAG | 1 cut(s) | 286 |
| AflIII | ACRYGT | 1 cut(s) | 586 |
| AgsI | TTSAA | 2 cut(s) | 187, 605 |
| AluBI | AGCT | 5 cut(s) | 103, 160, 183, 248, 285 |
| AluI | AGCT | 5 cut(s) | 103, 160, 183, 248, 285 |
| AlwI | GGATC | 1 cut(s) | 38 |
| ApoI | RAATTY | 4 cut(s) | 167, 187, 408, 529 |
| AsuHPI | GGTGA | 1 cut(s) | 587 |
| AsuII | TTCGAA | 1 cut(s) | 412 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 232, 264 |
| BbsI | GAAGAC | 1 cut(s) | 456 |
| BceAI | ACGGC | 1 cut(s) | 509 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 392, 426 |
| BfaI | CTAG | 2 cut(s) | 377, 613 |
| BfmI | CTRYAG | 2 cut(s) | 299, 401 |
| BfrI | CTTAAG | 1 cut(s) | 286 |
| BmsI | GCATC | 1 cut(s) | 109 |
| BpiI | GAAGAC | 1 cut(s) | 456 |
| Bpu14I | TTCGAA | 1 cut(s) | 412 |
| BpuEI | CTTGAG | 2 cut(s) | 130, 328 |
| Bsa29I | ATCGAT | 1 cut(s) | 33 |
| BsaWI | WCCGGW | 1 cut(s) | 152 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 288 |
| BseCI | ATCGAT | 1 cut(s) | 33 |
| BseGI | GGATG | 1 cut(s) | 474 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 288 |
| BseRI | GAGGAG | 1 cut(s) | 593 |
| BseYI | CCCAGC | 1 cut(s) | 244 |
| BshVI | ATCGAT | 1 cut(s) | 33 |
| BsiSI | CCGG | 1 cut(s) | 153 |
| BslFI | GGGAC | 1 cut(s) | 237 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 288 |
| BsmFI | GGGAC | 1 cut(s) | 237 |
| Bsp119I | TTCGAA | 1 cut(s) | 412 |
| Bsp1407I | TGTACA | 1 cut(s) | 498 |
| Bsp143I | GATC | 3 cut(s) | 30, 138, 212 |
| BspDI | ATCGAT | 1 cut(s) | 33 |
| BspMAI | CTGCAG | 1 cut(s) | 405 |
| BspPI | GGATC | 1 cut(s) | 38 |
| BspT104I | TTCGAA | 1 cut(s) | 412 |
| BspTI | CTTAAG | 1 cut(s) | 286 |
| BsrGI | TGTACA | 1 cut(s) | 498 |
| BssMI | GATC | 3 cut(s) | 30, 138, 212 |
| Bst4CI | ACNGT | 1 cut(s) | 498 |
| BstAFI | CTTAAG | 1 cut(s) | 286 |
| BstAUI | TGTACA | 1 cut(s) | 498 |
| BstBI | TTCGAA | 1 cut(s) | 412 |
| BstC8I | GCNNGC | 4 cut(s) | 50, 105, 175, 283 |
| BstF5I | GGATG | 1 cut(s) | 474 |
| BstKTI | GATC | 3 cut(s) | 33, 141, 215 |
| BstMBI | GATC | 3 cut(s) | 30, 138, 212 |
| BstNSI | RCATGY | 1 cut(s) | 590 |
| BstSFI | CTRYAG | 2 cut(s) | 299, 401 |
| BstV2I | GAAGAC | 1 cut(s) | 456 |
| Bsu15I | ATCGAT | 1 cut(s) | 33 |
| BsuTUI | ATCGAT | 1 cut(s) | 33 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsCI | GGATG | 1 cut(s) | 474 |
| BtsIMutI | CAGTG | 1 cut(s) | 198 |
| Cac8I | GCNNGC | 4 cut(s) | 50, 105, 175, 283 |
| ClaI | ATCGAT | 1 cut(s) | 33 |
| Csp6I | GTAC | 2 cut(s) | 499, 590 |
| CviAII | CATG | 3 cut(s) | 331, 565, 587 |
| CviJI | RGCY | 6 cut(s) | 103, 160, 183, 248, 281, 285 |
| CviKI_1 | RGCY | 6 cut(s) | 103, 160, 183, 248, 281, 285 |
| CviQI | GTAC | 2 cut(s) | 499, 590 |
| DpnI | GATC | 3 cut(s) | 32, 140, 214 |
| DpnII | GATC | 3 cut(s) | 30, 138, 212 |
| Eco57I | CTGAAG | 1 cut(s) | 234 |
| EcoRI | GAATTC | 3 cut(s) | 187, 408, 529 |
| FaeI | CATG | 3 cut(s) | 334, 568, 590 |
| FaiI | YATR | 9 cut(s) | 165, 332, 348, 480, 482, 491, 513, 566, 588 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 117, 149 |
| FaqI | GGGAC | 1 cut(s) | 237 |
| FatI | CATG | 3 cut(s) | 330, 564, 586 |
| FauNDI | CATATG | 1 cut(s) | 480 |
| FblI | GTMKAC | 1 cut(s) | 549 |
| FokI | GGATG | 1 cut(s) | 461 |
| FspBI | CTAG | 2 cut(s) | 377, 613 |
| GsaI | CCCAGC | 1 cut(s) | 248 |
| HapII | CCGG | 1 cut(s) | 153 |
| Hin1II | CATG | 3 cut(s) | 334, 568, 590 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 4 cut(s) | 22, 316, 397, 581 |
| HpaII | CCGG | 1 cut(s) | 153 |
| HphI | GGTGA | 1 cut(s) | 587 |
| Hpy166II | GTNNAC | 2 cut(s) | 550, 570 |
| Hpy188I | TCNGA | 3 cut(s) | 27, 253, 535 |
| Hpy188III | TCNNGA | 1 cut(s) | 377 |
| Hpy8I | GTNNAC | 2 cut(s) | 550, 570 |
| Hpy99I | CGWCG | 1 cut(s) | 46 |
| HpyAV | CCTTC | 4 cut(s) | 70, 85, 499, 611 |
| HpyCH4III | ACNGT | 1 cut(s) | 498 |
| HpyCH4V | TGCA | 4 cut(s) | 122, 173, 403, 484 |
| Hsp92II | CATG | 3 cut(s) | 334, 568, 590 |
| Kzo9I | GATC | 3 cut(s) | 30, 138, 212 |
| LpnPI | CCDG | 7 cut(s) | 34, 89, 166, 258, 295, 389, 558 |
| LweI | GCATC | 1 cut(s) | 109 |
| MaeI | CTAG | 2 cut(s) | 377, 613 |
| MaeIII | GTNAC | 3 cut(s) | 55, 239, 582 |
| MalI | GATC | 3 cut(s) | 32, 140, 214 |
| MboI | GATC | 3 cut(s) | 30, 138, 212 |
| MboII | GAAGA | 3 cut(s) | 25, 133, 461 |
| MluCI | AATT | 7 cut(s) | 37, 84, 167, 187, 326, 408, 529 |
| MlyI | GAGTC | 2 cut(s) | 406, 590 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MnlI | CCTC | 4 cut(s) | 21, 214, 268, 571 |
| MseI | TTAA | 5 cut(s) | 83, 87, 287, 353, 434 |
| MslI | CAYNNNNRTG | 1 cut(s) | 479 |
| MspCI | CTTAAG | 1 cut(s) | 286 |
| MspI | CCGG | 1 cut(s) | 153 |
| NdeI | CATATG | 1 cut(s) | 480 |
| NdeII | GATC | 3 cut(s) | 30, 138, 212 |
| NlaIII | CATG | 3 cut(s) | 334, 568, 590 |
| NmuCI | GTSAC | 2 cut(s) | 55, 582 |
| NspI | RCATGY | 1 cut(s) | 590 |
| NspV | TTCGAA | 1 cut(s) | 412 |
| PacI | TTAATTAA | 1 cut(s) | 87 |
| PciI | ACATGT | 1 cut(s) | 586 |
| PfeI | GAWTC | 2 cut(s) | 22, 316 |
| PleI | GAGTC | 2 cut(s) | 405, 589 |
| PpsI | GAGTC | 2 cut(s) | 405, 589 |
| PscI | ACATGT | 1 cut(s) | 586 |
| PspFI | CCCAGC | 1 cut(s) | 244 |
| PstI | CTGCAG | 1 cut(s) | 405 |
| RsaI | GTAC | 2 cut(s) | 500, 591 |
| RsaNI | GTAC | 2 cut(s) | 499, 590 |
| RseI | CAYNNNNRTG | 1 cut(s) | 479 |
| SaqAI | TTAA | 5 cut(s) | 83, 87, 287, 353, 434 |
| Sau3AI | GATC | 3 cut(s) | 30, 138, 212 |
| SchI | GAGTC | 2 cut(s) | 406, 590 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SfcI | CTRYAG | 2 cut(s) | 299, 401 |
| SfuI | TTCGAA | 1 cut(s) | 412 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 479 |
| SmlI | CTYRAG | 3 cut(s) | 145, 286, 307 |
| SmoI | CTYRAG | 3 cut(s) | 145, 286, 307 |
| Sse9I | AATT | 7 cut(s) | 37, 84, 167, 187, 326, 408, 529 |
| SspI | AATATT | 1 cut(s) | 432 |
| SspMI | CTAG | 2 cut(s) | 377, 613 |
| TaaI | ACNGT | 1 cut(s) | 498 |
| TaqI | TCGA | 3 cut(s) | 33, 41, 412 |
| TasI | AATT | 7 cut(s) | 37, 84, 167, 187, 326, 408, 529 |
| TatI | WGTACW | 1 cut(s) | 498 |
| TfiI | GAWTC | 2 cut(s) | 22, 316 |
| Tru1I | TTAA | 5 cut(s) | 83, 87, 287, 353, 434 |
| Tru9I | TTAA | 5 cut(s) | 83, 87, 287, 353, 434 |
| TscAI | CASTG | 1 cut(s) | 198 |
| TseFI | GTSAC | 2 cut(s) | 55, 582 |
| Tsp45I | GTSAC | 2 cut(s) | 55, 582 |
| TspDTI | ATGAA | 4 cut(s) | 180, 319, 431, 456 |
| TspRI | CASTG | 1 cut(s) | 198 |
| Vha464I | CTTAAG | 1 cut(s) | 286 |
| XapI | RAATTY | 4 cut(s) | 167, 187, 408, 529 |
| XbaI | TCTAGA | 1 cut(s) | 376 |
| XceI | RCATGY | 1 cut(s) | 590 |
| XmiI | GTMKAC | 1 cut(s) | 549 |
| XspI | CTAG | 2 cut(s) | 377, 613 |