Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0014560

Physical Location & Seq

Genomic Coordinates Forward (+)

13161515 .. 13163868

Gene Structure 2354 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g21140.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGGAGAGTCGCCGGAGAAGAAATCAGGTTGCGGCATTTTGAATGCTGTGTTTGGAAAGAGCAGTTTTTGGCCAAGAAGAACAACTTCCACTGGCTCTCTTCCCGTCAGTGGTACTCAATTTGTGAAATCACCAAGTGGTAACTCTAGAAGGCGGCATGGTAGCTCCGATGAGGCAACATTTCTTGAGATATCATCAGCAAATGGATCAGAACCTGCAACAAAACCCGTCACAAAACCATCTCAATATAGTAACAGAGCGCCCCCTATACAGCCATATCAAAATCAGGGTAGATGTACTAAGCCACCTCAGGAAGCTGGAGCCATGGTTTCAGGTTCAGGCCAAGGCCAACAAAGAGCTACGAAAATGGCTCCGAGTCAAGGTTATGTTAACCAAGGCAAAAGGGTTCCCAAGGACGCAGGTGGGTTGTCTGGTGAGCTTGAAAGCATGATTGCTGATCACCAGAAATCACAAGGAAGTAGCATATTCGTTAGAGCTTCATCCAGCAACTTTATGCTTACGGGTAACCTGGGTAACTTGAGAACAGGAGGTGGTGGTGGTGGAAATGTGAACTCAAATAATGTGCTGGATTACCTTCCAAAGACAGCAAGAGAAGATACCCCCATGATGATGAATGGAAATGTAGGAAAGAGTAGTGCTCCTAAGGAAGAGAAGAAAAAACAAAGTACGCAGCCTGCTTCATTCTGTCGTGCATTATCAACCAGGATGGACCCCGAGACACTGAAGATTATGGGCAATGAGGATTACAAGAACGGAAATTTTGCAGAGGCTTTGTCTTTGTACGATGCTGCGATTTCTATTGATCCCAATAAGGCTTCATATAGGAGCAATAAGAGTGCTGCGTTAACTGCTCTTGGTCAAATTCTTGACGCAGTTTTTGAGTGCAGAGAGGCCATTCGGATTGAACCTCATTATCATAGGGCTCATCGTCGCCTTGCAACCTTATACATTAGATTAGGGGAAGCTGAAAAAGCTACGTATCACTTTAAACATGCTGGACCAGAAGCTGATCAAGAGGACTTGGCTAAAGTGAGAAATCTTCAGACTCATCTGAACAAGTGCACAGAGGCTCGTAGGTTAAGAGATTGGAACACCTTGATCAAGGCAACTCAAAACGTTATAGCAGCTGGTGCAGATTCAGCACCACAGATATTTTCTCTGCAAGCCGAGGCCTTGCTGAAGGTCCATAAGCACCAAGAAGCAGATGAGGCTTTATCCAGGGGTCCAAACTTTGAGGTGGATGCTTGCACAAAATACTTCGGTCCTATTAGTAACGCGAGTATGTTAGTAACAAGGGCTCAGGTTGACTTGTCTGCCGGCAGAATCGACGATGCATTAGAGGCAATTCAACGAGCATCCCGTCTTGACTCAAACAACAAGGAGGCACTCGTGGTAATGAGGAAGGCTAGAGCTGTTGCAGGAGCGCGATCAAAGGGTAATGATCTTTTCAAGACATCAAGATTCTCAGAGGCTTGTGTTGCATATGGGGAGGGACTTGAGCAGGACCCTTATAACTCGGTGTTGTTATGCAACCGCGCGGCCTGTCGGTCCAAACTTGGCCAGTTTGACCAAGCAATTGAGGACTGCACGGCTGCACTTAATGTGCGTCCTTCTTACAGCAAGGCCAGGCTAAGAAGAGCAGACTGCCATGCCAAGTTGGAAAAATGGGATGCTTCGATACAAGACTACGAGATTTTGCTTAAGCAAACACCAGATGATGAGGAGGTAAATCGTGCTTTATCCGAGGTGCGGACACAGCGCAAGAAACAGCGAGGTGAGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_17 TPR_2 TPR_7 TPR_8 Thioredoxin

Protein Analysis

602

Amino Acids

65.55

Weight (kDa)

9.28

Isoelectric Point (pI)

46.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_1	PF00515	515 - 546	1e-06	Tetratricopeptide repeat
TPR_16	PF13432	525 - 580	6.7e-06	Tetratricopeptide repeat
TPR_19	PF14559	527 - 588	3e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10090 AT5G65160
fragaria_vesca	FvH4_1g21140
malus_domestica	MD01G1027500.v1.1 MD15G1326400.v1.1
prunus_persica	Prupe.6G182700_v2.0.a1 Prupe.6G182700_v2.0.a1
pyrus_communis	pycom15g28750
rosa_chinensis	RchiOBHm_Chr2g0114921
rosa_laevigata	RLG00000018135
rosa_roxburghii	Rroxscaffold_2G00130450
rosa_rugosa	Rorug02G0191800
rosa_samantha	Rh2AG250600 Rh2BG260000 Rh2CG254800 Rh2DG258700
rosa_wichuraiana	Rw2G019530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1533
AarI	CACCTGC	1 cut(s)	410
Acc36I	ACCTGC	2 cut(s)	223, 410
AccII	CGCG	4 cut(s)	1298, 1447, 1557, 1559
AciI	CCGC	5 cut(s)	33, 154, 1555, 1559, 1771
AclI	AACGTT	1 cut(s)	1137
AclWI	GGATC	2 cut(s)	214, 818
AcoI	YGGCCR	2 cut(s)	71, 1579
AcsI	RAATTY	2 cut(s)	778, 882
AcuI	CTGAAG	3 cut(s)	764, 1046, 1220
AdeI	CACNNNGTG	1 cut(s)	137
AfaI	GTAC	4 cut(s)	115, 298, 688, 803
AfiI	CCNNNNNNNGG	3 cut(s)	110, 380, 1770
AflII	CTTAAG	1 cut(s)	1721
AgsI	TTSAA	5 cut(s)	43, 443, 926, 1370, 1471
AjnI	CCWGG	4 cut(s)	528, 722, 1238, 1646
Alw21I	GWGCWC	2 cut(s)	661, 1085
Alw26I	GTCTC	1 cut(s)	731
Alw44I	GTGCAC	1 cut(s)	1081
AlwI	GGATC	2 cut(s)	214, 818
AlwNI	CAGNNNCTG	2 cut(s)	215, 1028
Ama87I	CYCGRG	1 cut(s)	734
AoxI	GGCC	8 cut(s)	71, 340, 346, 912, 1191, 1560, 1579, 1644
ApaLI	GTGCAC	1 cut(s)	1081
ApeKI	GCWGC	5 cut(s)	691, 809, 860, 1145, 1613
ApoI	RAATTY	2 cut(s)	778, 882
ArsI	GACNNNNNNTTYG	2 cut(s)	881, 913
Asp700I	GAANNNNTTC	1 cut(s)	85
AspLEI	GCGC	4 cut(s)	262, 1447, 1559, 1782
AspS9I	GGNCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
AsuHPI	GGTGA	3 cut(s)	123, 446, 452
AvaI	CYCGRG	1 cut(s)	734
AvaII	GGWCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
AxyI	CCTNAGG	2 cut(s)	309, 663
BaeGI	GKGCMC	1 cut(s)	1085
BalI	TGGCCA	2 cut(s)	73, 1581
BanII	GRGCYC	2 cut(s)	946, 1321
BauI	CACGAG	1 cut(s)	1409
Bbv12I	GWGCWC	2 cut(s)	661, 1085
BbvI	GCAGC	5 cut(s)	703, 796, 847, 1157, 1600
BccI	CCATC	2 cut(s)	247, 721
BceAI	ACGGC	1 cut(s)	1626
BciT130I	CCWGG	4 cut(s)	530, 724, 1240, 1648
BclI	TGATCA	3 cut(s)	457, 1030, 1119
BcoDI	GTCTC	1 cut(s)	731
BfaI	CTAG	2 cut(s)	147, 1428
BfoI	RGCGCY	1 cut(s)	263
BfrI	CTTAAG	1 cut(s)	1721
BfuAI	ACCTGC	2 cut(s)	223, 410
BisI	GCNGC	8 cut(s)	34, 155, 692, 810, 861, 1146, 1560, 1614
BlsI	GCNGC	8 cut(s)	35, 156, 693, 811, 862, 1147, 1561, 1615
Bme1390I	CCNGG	4 cut(s)	530, 724, 1240, 1648
Bme18I	GGWCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
BmeT110I	CYCGRG	1 cut(s)	734
BmgT120I	GGNCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
BmiI	GGNNCC	6 cut(s)	322, 372, 408, 732, 1245, 1527
BmrFI	CCNGG	4 cut(s)	530, 724, 1240, 1648
BmsI	GCATC	5 cut(s)	796, 1252, 1342, 1385, 1681
BplI	GAGNNNNNCTC	2 cut(s)	643, 675
BpmI	CTGGAG	1 cut(s)	339
Bpu10I	CCTNAGC	1 cut(s)	1320
BpuEI	CTTGAG	3 cut(s)	206, 559, 1538
BsaAI	YACGTR	1 cut(s)	999
BsaJI	CCNNGG	8 cut(s)	324, 343, 394, 411, 529, 1188, 1239, 1764
BsaXI	ACNNNNNCTCC	2 cut(s)	312, 342
Bsc4I	CCNNNNNNNGG	3 cut(s)	110, 380, 1770
Bse118I	RCCGGY	1 cut(s)	1337
Bse1I	ACTGG	2 cut(s)	97, 1582
Bse21I	CCTNAGG	2 cut(s)	309, 663
Bse3DI	GCAATG	1 cut(s)	763
BseBI	CCWGG	4 cut(s)	530, 724, 1240, 1648
BseDI	CCNNGG	8 cut(s)	324, 343, 394, 411, 529, 1188, 1239, 1764
BseGI	GGATG	5 cut(s)	500, 732, 1267, 1376, 1696
BseLI	CCNNNNNNNGG	3 cut(s)	110, 380, 1770
BseMI	GCAATG	1 cut(s)	763
BseMII	CTCAG	3 cut(s)	323, 1334, 1500
BseNI	ACTGG	2 cut(s)	97, 1582
BseRI	GAGGAG	1 cut(s)	1757
BseSI	GKGCMC	1 cut(s)	1085
BseXI	GCAGC	5 cut(s)	703, 796, 847, 1157, 1600
BsgI	GTGCAG	4 cut(s)	925, 1173, 1591, 1599
Bsh1236I	CGCG	4 cut(s)	1298, 1447, 1557, 1559
BshFI	GGCC	8 cut(s)	73, 342, 348, 914, 1193, 1562, 1581, 1646
BsiHKAI	GWGCWC	2 cut(s)	661, 1085
BsiHKCI	CYCGRG	1 cut(s)	734
BsiSI	CCGG	2 cut(s)	14, 1338
BslFI	GGGAC	1 cut(s)	1527
BslI	CCNNNNNNNGG	3 cut(s)	110, 380, 1770
BsmAI	GTCTC	1 cut(s)	731
BsmFI	GGGAC	1 cut(s)	1527
BsmI	GAATGC	1 cut(s)	49
BsnI	GGCC	8 cut(s)	73, 342, 348, 914, 1193, 1562, 1581, 1646
BsoBI	CYCGRG	1 cut(s)	734
Bsp1286I	GDGCHC	4 cut(s)	661, 946, 1085, 1321
Bsp143I	GATC	7 cut(s)	206, 457, 823, 1030, 1119, 1448, 1462
Bsp19I	CCATGG	1 cut(s)	324
BspACI	CCGC	5 cut(s)	33, 154, 1555, 1559, 1771
BspANI	GGCC	8 cut(s)	73, 342, 348, 914, 1193, 1562, 1581, 1646
BspCNI	CTCAG	3 cut(s)	322, 1333, 1499
BspFNI	CGCG	4 cut(s)	1298, 1447, 1557, 1559
BspLI	GGNNCC	6 cut(s)	322, 372, 408, 732, 1245, 1527
BspMI	ACCTGC	2 cut(s)	223, 410
BspPI	GGATC	2 cut(s)	214, 818
BspQI	GCTCTTC	1 cut(s)	1651
BspTI	CTTAAG	1 cut(s)	1721
BsrDI	GCAATG	1 cut(s)	763
BsrFI	RCCGGY	1 cut(s)	1337
BsrI	ACTGG	2 cut(s)	97, 1582
BssAI	RCCGGY	1 cut(s)	1337
BssECI	CCNNGG	8 cut(s)	324, 343, 394, 411, 529, 1188, 1239, 1764
BssMI	GATC	7 cut(s)	206, 457, 823, 1030, 1119, 1448, 1462
BssSI	CACGAG	1 cut(s)	1409
BssT1I	CCWWGG	4 cut(s)	324, 343, 394, 411
Bst2BI	CACGAG	1 cut(s)	1409
Bst2UI	CCWGG	4 cut(s)	530, 724, 1240, 1648
Bst6I	CTCTTC	3 cut(s)	105, 663, 1651
BstAFI	CTTAAG	1 cut(s)	1721
BstAPI	GCANNNNNTGC	1 cut(s)	1151
BstBAI	YACGTR	1 cut(s)	999
BstC8I	GCNNGC	4 cut(s)	696, 1185, 1267, 1339
BstDEI	CTNAG	6 cut(s)	300, 309, 663, 1320, 1486, 1652
BstDSI	CCRYGG	1 cut(s)	324
BstEII	GGTNACC	1 cut(s)	524
BstF5I	GGATG	5 cut(s)	500, 732, 1267, 1376, 1696
BstFNI	CGCG	4 cut(s)	1298, 1447, 1557, 1559
BstH2I	RGCGCY	1 cut(s)	263
BstHHI	GCGC	4 cut(s)	262, 1447, 1559, 1782
BstKTI	GATC	7 cut(s)	209, 460, 826, 1033, 1122, 1451, 1465
BstMAI	GTCTC	1 cut(s)	731
BstMBI	GATC	7 cut(s)	206, 457, 823, 1030, 1119, 1448, 1462
BstMWI	GCNNNNNNNGC	8 cut(s)	869, 992, 1151, 1160, 1229, 1361, 1499, 1777
BstNI	CCWGG	4 cut(s)	530, 724, 1240, 1648
BstNSI	RCATGY	1 cut(s)	1016
BstPI	GGTNACC	1 cut(s)	524
BstSCI	CCNGG	4 cut(s)	528, 722, 1238, 1646
BstSLI	GKGCMC	1 cut(s)	1085
BstSNI	TACGTA	1 cut(s)	999
BstUI	CGCG	4 cut(s)	1298, 1447, 1557, 1559
BstV1I	GCAGC	5 cut(s)	703, 796, 847, 1157, 1600
Bsu36I	CCTNAGG	2 cut(s)	309, 663
BsuRI	GGCC	8 cut(s)	73, 342, 348, 914, 1193, 1562, 1581, 1646
BtgI	CCRYGG	1 cut(s)	324
BtsCI	GGATG	5 cut(s)	500, 732, 1267, 1376, 1696
BtsIMutI	CAGTG	3 cut(s)	90, 115, 740
BveI	ACCTGC	2 cut(s)	223, 410
Cac8I	GCNNGC	4 cut(s)	696, 1185, 1267, 1339
CaiI	CAGNNNCTG	2 cut(s)	215, 1028
CfoI	GCGC	4 cut(s)	262, 1447, 1559, 1782
Cfr10I	RCCGGY	1 cut(s)	1337
Cfr13I	GGNCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
CseI	GACGC	3 cut(s)	425, 899, 1616
Csp6I	GTAC	4 cut(s)	114, 297, 687, 802
CviAII	CATG	6 cut(s)	158, 325, 448, 625, 1013, 1670
CviQI	GTAC	4 cut(s)	114, 297, 687, 802
DdeI	CTNAG	6 cut(s)	300, 309, 663, 1320, 1486, 1652
DpnI	GATC	7 cut(s)	208, 459, 825, 1032, 1121, 1450, 1464
DpnII	GATC	7 cut(s)	206, 457, 823, 1030, 1119, 1448, 1462
DraI	TTTAAA	1 cut(s)	1009
DraIII	CACNNNGTG	1 cut(s)	137
EaeI	YGGCCR	2 cut(s)	71, 1579
Eam1104I	CTCTTC	3 cut(s)	105, 663, 1651
EarI	CTCTTC	3 cut(s)	105, 663, 1651
Eco105I	TACGTA	1 cut(s)	999
Eco130I	CCWWGG	4 cut(s)	324, 343, 394, 411
Eco147I	AGGCCT	1 cut(s)	1193
Eco24I	GRGCYC	2 cut(s)	946, 1321
Eco32I	GATATC	1 cut(s)	192
Eco47I	GGWCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
Eco57I	CTGAAG	3 cut(s)	764, 1046, 1220
Eco81I	CCTNAGG	2 cut(s)	309, 663
Eco88I	CYCGRG	1 cut(s)	734
Eco91I	GGTNACC	1 cut(s)	524
EcoO109I	RGGNCCY	1 cut(s)	1525
EcoO65I	GGTNACC	1 cut(s)	524
EcoRII	CCWGG	4 cut(s)	528, 722, 1238, 1646
EcoRV	GATATC	1 cut(s)	192
EcoT14I	CCWWGG	4 cut(s)	324, 343, 394, 411
EcoT22I	ATGCAT	1 cut(s)	1357
EcoT38I	GRGCYC	2 cut(s)	946, 1321
ErhI	CCWWGG	4 cut(s)	324, 343, 394, 411
FaeI	CATG	6 cut(s)	161, 328, 451, 628, 1016, 1673
FalI	AAGNNNNNCTT	2 cut(s)	70, 102
FaqI	GGGAC	1 cut(s)	1527
FatI	CATG	6 cut(s)	157, 324, 447, 624, 1012, 1669
FauNDI	CATATG	1 cut(s)	1504
FbaI	TGATCA	3 cut(s)	457, 1030, 1119
Fnu4HI	GCNGC	8 cut(s)	34, 155, 692, 810, 861, 1146, 1560, 1614
FokI	GGATG	5 cut(s)	487, 739, 1274, 1363, 1703
FriOI	GRGCYC	2 cut(s)	946, 1321
Fsp4HI	GCNGC	8 cut(s)	34, 155, 692, 810, 861, 1146, 1560, 1614
FspBI	CTAG	2 cut(s)	147, 1428
GlaI	GCGC	4 cut(s)	261, 1446, 1558, 1781
GluI	GCNGC	8 cut(s)	34, 155, 692, 810, 861, 1146, 1560, 1614
GsuI	CTGGAG	1 cut(s)	339
HaeII	RGCGCY	1 cut(s)	263
HaeIII	GGCC	8 cut(s)	73, 342, 348, 914, 1193, 1562, 1581, 1646
HapII	CCGG	2 cut(s)	14, 1338
HgaI	GACGC	3 cut(s)	425, 899, 1616
HhaI	GCGC	4 cut(s)	262, 1447, 1559, 1782
Hin1II	CATG	6 cut(s)	161, 328, 451, 628, 1016, 1673
Hin6I	GCGC	4 cut(s)	260, 1445, 1557, 1780
HinP1I	GCGC	4 cut(s)	260, 1445, 1557, 1780
HincII	GTYRAC	3 cut(s)	391, 867, 1327
HindII	GTYRAC	3 cut(s)	391, 867, 1327
HinfI	GANTC	7 cut(s)	8, 376, 1066, 1157, 1344, 1388, 1482
HpaI	GTTAAC	2 cut(s)	391, 867
HpaII	CCGG	2 cut(s)	14, 1338
HphI	GGTGA	3 cut(s)	123, 446, 452
Hpy166II	GTNNAC	5 cut(s)	391, 571, 867, 1083, 1327
Hpy188I	TCNGA	8 cut(s)	169, 211, 375, 921, 1065, 1074, 1489, 1765
Hpy188III	TCNNGA	8 cut(s)	147, 185, 311, 887, 1034, 1385, 1471, 1479
Hpy8I	GTNNAC	5 cut(s)	391, 571, 867, 1083, 1327
Hpy99I	CGWCG	2 cut(s)	954, 1352
HpyAV	CCTTC	5 cut(s)	144, 605, 1195, 1417, 1641
HpyCH4IV	ACGT	2 cut(s)	998, 1137
HpyF10VI	GCNNNNNNNGC	8 cut(s)	869, 992, 1151, 1160, 1229, 1361, 1499, 1777
HpyF3I	CTNAG	6 cut(s)	300, 309, 663, 1320, 1486, 1652
HpySE526I	ACGT	2 cut(s)	998, 1137
Hsp92II	CATG	6 cut(s)	161, 328, 451, 628, 1016, 1673
HspAI	GCGC	4 cut(s)	260, 1445, 1557, 1780
KroI	GCCGGC	1 cut(s)	1337
KroNI	GCCGGC	1 cut(s)	1339
Ksp22I	TGATCA	3 cut(s)	457, 1030, 1119
KspAI	GTTAAC	2 cut(s)	391, 867
Kzo9I	GATC	7 cut(s)	206, 457, 823, 1030, 1119, 1448, 1462
LguI	GCTCTTC	1 cut(s)	1651
LmnI	GCTCC	6 cut(s)	170, 320, 376, 664, 846, 1442
Lsp1109I	GCAGC	5 cut(s)	703, 796, 847, 1157, 1600
LweI	GCATC	5 cut(s)	796, 1252, 1342, 1385, 1681
MaeI	CTAG	2 cut(s)	147, 1428
MaeII	ACGT	2 cut(s)	998, 1137
MaeIII	GTNAC	7 cut(s)	140, 229, 251, 524, 533, 1292, 1309
MalI	GATC	7 cut(s)	208, 459, 825, 1032, 1121, 1450, 1464
MboI	GATC	7 cut(s)	206, 457, 823, 1030, 1119, 1448, 1462
MboII	GAAGA	9 cut(s)	31, 90, 92, 626, 680, 685, 757, 1052, 1668
MfeI	CAATTG	1 cut(s)	1596
MhlI	GDGCHC	4 cut(s)	661, 946, 1085, 1321
MlsI	TGGCCA	2 cut(s)	73, 1581
MluCI	AATT	5 cut(s)	119, 778, 882, 1365, 1596
MluNI	TGGCCA	2 cut(s)	73, 1581
MlyI	GAGTC	4 cut(s)	17, 385, 1060, 1382
MmeI	TCCRAC	1 cut(s)	1659
Mox20I	TGGCCA	2 cut(s)	73, 1581
Mph1103I	ATGCAT	1 cut(s)	1357
MroNI	GCCGGC	1 cut(s)	1337
MroXI	GAANNNNTTC	1 cut(s)	85
MscI	TGGCCA	2 cut(s)	73, 1581
MseI	TTAA	6 cut(s)	390, 866, 1008, 1100, 1620, 1722
MslI	CAYNNNNRTG	1 cut(s)	629
Msp20I	TGGCCA	2 cut(s)	73, 1581
MspA1I	CMGCKG	1 cut(s)	1148
MspCI	CTTAAG	1 cut(s)	1721
MspI	CCGG	2 cut(s)	14, 1338
MspR9I	CCNGG	4 cut(s)	530, 724, 1240, 1648
MunI	CAATTG	1 cut(s)	1596
Mva1269I	GAATGC	1 cut(s)	49
MvaI	CCWGG	4 cut(s)	530, 724, 1240, 1648
MvnI	CGCG	4 cut(s)	1298, 1447, 1557, 1559
MwoI	GCNNNNNNNGC	8 cut(s)	869, 992, 1151, 1160, 1229, 1361, 1499, 1777
NaeI	GCCGGC	1 cut(s)	1339
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	1 cut(s)	1504
NdeII	GATC	7 cut(s)	206, 457, 823, 1030, 1119, 1448, 1462
NgoMIV	GCCGGC	1 cut(s)	1337
NlaIII	CATG	6 cut(s)	161, 328, 451, 628, 1016, 1673
NlaIV	GGNNCC	6 cut(s)	322, 372, 408, 732, 1245, 1527
NmeAIII	GCCGAG	1 cut(s)	1213
NmuCI	GTSAC	1 cut(s)	229
NsiI	ATGCAT	1 cut(s)	1357
NspI	RCATGY	1 cut(s)	1016
PaqCI	CACCTGC	1 cut(s)	410
PceI	AGGCCT	1 cut(s)	1193
PciSI	GCTCTTC	1 cut(s)	1651
PcsI	WCGNNNNNNNCGW	1 cut(s)	1378
PctI	GAATGC	1 cut(s)	49
PdiI	GCCGGC	1 cut(s)	1339
PdmI	GAANNNNTTC	1 cut(s)	85
PfeI	GAWTC	3 cut(s)	1157, 1344, 1482
PkrI	GCNGC	8 cut(s)	35, 156, 693, 811, 862, 1147, 1561, 1615
PleI	GAGTC	4 cut(s)	16, 384, 1060, 1382
PpsI	GAGTC	4 cut(s)	16, 384, 1060, 1382
Ppu21I	YACGTR	1 cut(s)	999
PpuMI	RGGWCCY	1 cut(s)	1525
PsiI	TTATAA	1 cut(s)	1533
Psp1406I	AACGTT	1 cut(s)	1137
Psp5II	RGGWCCY	1 cut(s)	1525
Psp6I	CCWGG	4 cut(s)	528, 722, 1238, 1646
PspEI	GGTNACC	1 cut(s)	524
PspGI	CCWGG	4 cut(s)	528, 722, 1238, 1646
PspN4I	GGNNCC	6 cut(s)	322, 372, 408, 732, 1245, 1527
PspPI	GGNCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
PspPPI	RGGWCCY	1 cut(s)	1525
PstNI	CAGNNNCTG	2 cut(s)	215, 1028
PvuII	CAGCTG	1 cut(s)	1148
RsaI	GTAC	4 cut(s)	115, 298, 688, 803
RsaNI	GTAC	4 cut(s)	114, 297, 687, 802
RseI	CAYNNNNRTG	1 cut(s)	629
SapI	GCTCTTC	1 cut(s)	1651
SaqAI	TTAA	6 cut(s)	390, 866, 1008, 1100, 1620, 1722
SatI	GCNGC	8 cut(s)	34, 155, 692, 810, 861, 1146, 1560, 1614
Sau3AI	GATC	7 cut(s)	206, 457, 823, 1030, 1119, 1448, 1462
Sau96I	GGNCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
SchI	GAGTC	4 cut(s)	17, 385, 1060, 1382
ScrFI	CCNGG	4 cut(s)	530, 724, 1240, 1648
SduI	GDGCHC	4 cut(s)	661, 946, 1085, 1321
SfaNI	GCATC	5 cut(s)	796, 1252, 1342, 1385, 1681
SinI	GGWCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
SmiMI	CAYNNNNRTG	1 cut(s)	629
SmlI	CTYRAG	4 cut(s)	185, 538, 1517, 1721
SmoI	CTYRAG	4 cut(s)	185, 538, 1517, 1721
SnaBI	TACGTA	1 cut(s)	999
Sse9I	AATT	5 cut(s)	119, 778, 882, 1365, 1596
SseBI	AGGCCT	1 cut(s)	1193
SsiI	CCGC	5 cut(s)	33, 154, 1555, 1559, 1771
SspMI	CTAG	2 cut(s)	147, 1428
StuI	AGGCCT	1 cut(s)	1193
StyD4I	CCNGG	4 cut(s)	528, 722, 1238, 1646
StyI	CCWWGG	4 cut(s)	324, 343, 394, 411
TaiI	ACGT	2 cut(s)	1001, 1140
TaqI	TCGA	2 cut(s)	1347, 1697
TaqII	GACCGA	2 cut(s)	1271, 1557
TasI	AATT	5 cut(s)	119, 778, 882, 1365, 1596
TatI	WGTACW	1 cut(s)	296
TauI	GCSGC	3 cut(s)	36, 157, 1562
TfiI	GAWTC	3 cut(s)	1157, 1344, 1482
Tru1I	TTAA	6 cut(s)	390, 866, 1008, 1100, 1620, 1722
Tru9I	TTAA	6 cut(s)	390, 866, 1008, 1100, 1620, 1722
TscAI	CASTG	3 cut(s)	97, 115, 747
TseFI	GTSAC	1 cut(s)	229
TseI	GCWGC	5 cut(s)	691, 809, 860, 1145, 1613
Tsp45I	GTSAC	1 cut(s)	229
TspDTI	ATGAA	4 cut(s)	489, 647, 690, 828
TspGWI	ACGGA	1 cut(s)	789
TspRI	CASTG	3 cut(s)	97, 115, 747
Vha464I	CTTAAG	1 cut(s)	1721
VneI	GTGCAC	1 cut(s)	1081
VpaK11BI	GGWCC	7 cut(s)	730, 1019, 1204, 1244, 1283, 1525, 1569
XapI	RAATTY	2 cut(s)	778, 882
XbaI	TCTAGA	1 cut(s)	146
XceI	RCATGY	1 cut(s)	1016
XmnI	GAANNNNTTC	1 cut(s)	85
XspI	CTAG	2 cut(s)	147, 1428
Zsp2I	ATGCAT	1 cut(s)	1357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.