Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0014560

Physical Location & Seq

Genomic Coordinates Forward (+)

66570304 .. 66573616

Gene Structure 3313 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00130450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGGAGAGTCGCCGGAGAAGAAATCAGGTTGCGGCATTTTGAATGCTGTGTTTGGACGGAGCAGTTTTTGGCCAAGAAGAACAACTTCCACGGGCTCCCTTCCCGCCAGTGGCAATCAGTTTGTGAAAACACCAAGTGGTAACTCTAGAAGGCGGCGTGGTGGCTCCGATGAGGCATCATTTCTTGACATATCAGCGGCTAATGGATCAGAACCTTCATCAAAACCCGTCACAAAACCATCTCAATATAGTAACAGAGCGCCCCCTATACAGCCACATCAAAATAAGGGTAGAAGTACTAAGCCACCTCAGGAAGCTGGAGCCATGGTTTCACGTCCAGGCCAAGGCCAACAAGGAGCAATGAGAATGGCTCCGAGTCAAGGTTATGTTAATCAAGGCAAGAGGGTTCCCAAGGAAGCAGTTGGGTTGTCTGGTGAGCTTGATAGCATGATTGCTGATCACCAGAAATCAAAAGGGAGTAGCACATTCGTTAGAGCTTCATCCGGCAATGTGATGCTTTTTGGTAACCTGGGTAACTTGAGAACAGGAGGTGGCGGCGGCGGTGGTGGAGGATATGCGAAAACAAATAATGTGCTGGATTACCTTCCAAAGACAGCAAGAGAAGAAACCCCGATGATGATGAATGGAAATGTAGGGAAGAGTAGTGCTCCTAAAGAAGAGAAAAAACCAAGTTCGCAAAATCAGCCTACTTCATTTTGTCGCGCATTATCAACAAGGATGGACCCCGAGACACTGAAGATTATGGGCAATGAGGATTACAAGAATGGAAGATTTGAAGAGGCTTTGTCTTTGTATGACGCTGCAATTTCTATTGACCCCGATAAGGCTTCATATAGGAGCAACAAGAGTGCTGCATTAACTGCTCTTGGTCAAATTCTTGAGGCAATTTTTGAGTGCAGAGAAGCCATTCGGATTGAACCTCATTATCATAGGGCTCATCATCGTCTTGCAACCTTATACATTAGATTAGGGGAAGCTGAAAAAGCTACATATCACTATAAACATTCTGGACCAGAGGCTGATCAAGAGGACTTGGCTAAAGTGAGATCTCTTCAGGCTTTTCTGAACAAGTGCACAGAGGCTCGTAGGTTAAGAGATTGGAACACCTTGATCAAGGAAACCCAAAATGTTATAGCAGCTGGTGCAGATTCAGCACCACAGATATTTTCTTTGCAAGCCGAGGCCTTGCTGAAGGTCCATAGGCACCAAGAAGCAGATGAGGCTTTATCCAGGGGTCCAAACTTTGGGGTGGATGCTTGCACTAAATACTTCGGTCCTATTAGTAACGCGAGTATGTTAGTAACAAGGGCTCAGGTTGACATGTGTGCTGGAAGAATCGACGATGCATTGGAGGCAGCTCAACGAGCATCCCGTCTTGACTCAAACAACAAGGAAGCAAACATGGTCATGAGGAAGGCTAGAGCTGTTGCAGGAGCGCGATCAAAGGGTAATGAGCTATTCAAGACATCAAGATTCTCAGAGGCTTGTGTTGCATATGGGGAGGGACTTGAGCAGGACCCTTACAACTCAGTGTTGTTATGCAACCGCGCTGCTTGTCGGTCCAAACTAGGCCAGTTTGACCAAGCAATTGAGGACTGTACAGCTGCACTTAATGTGCGTCCTTCTTACAGCAAGGCCAGACTAAGAAGAGCAGATTGCTATGCCAAGTTGGGAAAATGGGATGCTTCATTACAAGACTATGAGATTTTGATCAAGCAAACACCAGATGATGAGGAGATAAAACGTGCTTTGTCTGAGGTGCGGACACAGCTCAAGAAACAGCGAGGAGAGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_17 TPR_2 TPR_7 TPR_8 Thioredoxin

Protein Analysis

605

Amino Acids

65.97

Weight (kDa)

9.35

Isoelectric Point (pI)

48.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_11	PF13414	256 - 288	3.9e-06	TPR repeat
TPR_1	PF00515	519 - 550	1.1e-06	Tetratricopeptide repeat
TPR_16	PF13432	529 - 584	2.6e-06	Tetratricopeptide repeat
TPR_19	PF14559	530 - 592	1.1e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10090 AT5G65160
fragaria_vesca	FvH4_1g21140
malus_domestica	MD01G1027500.v1.1 MD15G1326400.v1.1
prunus_persica	Prupe.6G182700_v2.0.a1 Prupe.6G182700_v2.0.a1
pyrus_communis	pycom15g28750
rosa_chinensis	RchiOBHm_Chr2g0114921
rosa_laevigata	RLG00000018135
rosa_roxburghii	Rroxscaffold_2G00130450
rosa_rugosa	Rorug02G0191800
rosa_samantha	Rh2AG250600 Rh2BG260000 Rh2CG254800 Rh2DG258700
rosa_wichuraiana	Rw2G019530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1224
AccB7I	CCANNNNNTGG	1 cut(s)	1265
AccII	CGCG	4 cut(s)	723, 1310, 1459, 1569
AciI	CCGC	9 cut(s)	33, 105, 154, 197, 555, 558, 561, 1567, 1783
AclWI	GGATC	1 cut(s)	214
AcoI	YGGCCR	1 cut(s)	71
AcsI	RAATTY	1 cut(s)	894
AcuI	CTGAAG	3 cut(s)	776, 1058, 1232
AdeI	CACNNNGTG	1 cut(s)	137
AfaI	GTAC	2 cut(s)	298, 1621
AfiI	CCNNNNNNNGG	5 cut(s)	110, 344, 380, 844, 1265
AflIII	ACRYGT	1 cut(s)	1341
AgsI	TTSAA	4 cut(s)	43, 797, 938, 1483
AjiI	CACGTC	1 cut(s)	335
AjnI	CCWGG	3 cut(s)	337, 528, 1250
Alw21I	GWGCWC	2 cut(s)	670, 1097
Alw26I	GTCTC	1 cut(s)	743
Alw44I	GTGCAC	1 cut(s)	1093
AlwI	GGATC	1 cut(s)	214
AlwNI	CAGNNNCTG	1 cut(s)	1040
Ama87I	CYCGRG	1 cut(s)	746
AoxI	GGCC	6 cut(s)	71, 340, 346, 1203, 1591, 1656
ApaLI	GTGCAC	1 cut(s)	1093
ApeKI	GCWGC	6 cut(s)	821, 872, 1157, 1376, 1571, 1625
ApoI	RAATTY	1 cut(s)	894
Asp700I	GAANNNNTTC	2 cut(s)	85, 927
AspLEI	GCGC	4 cut(s)	262, 725, 1459, 1571
AspS9I	GGNCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
AsuHPI	GGTGA	2 cut(s)	446, 452
AvaI	CYCGRG	1 cut(s)	746
AvaII	GGWCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
AxyI	CCTNAGG	1 cut(s)	309
BaeGI	GKGCMC	1 cut(s)	1097
BalI	TGGCCA	1 cut(s)	73
BanI	GGYRCC	1 cut(s)	1224
BanII	GRGCYC	3 cut(s)	98, 958, 1333
Bbv12I	GWGCWC	2 cut(s)	670, 1097
BbvI	GCAGC	6 cut(s)	808, 859, 1169, 1388, 1558, 1612
BccI	CCATC	2 cut(s)	247, 733
BciT130I	CCWGG	3 cut(s)	339, 530, 1252
BclI	TGATCA	4 cut(s)	457, 1042, 1131, 1731
BcoDI	GTCTC	1 cut(s)	743
BfaI	CTAG	3 cut(s)	147, 1440, 1589
BfoI	RGCGCY	1 cut(s)	263
BglII	AGATCT	1 cut(s)	1067
BmcAI	AGTACT	1 cut(s)	298
Bme1390I	CCNGG	3 cut(s)	339, 530, 1252
Bme18I	GGWCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
BmeT110I	CYCGRG	1 cut(s)	746
BmgBI	CACGTC	1 cut(s)	335
BmgT120I	GGNCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
BmiI	GGNNCC	9 cut(s)	97, 166, 322, 372, 408, 744, 1226, 1257, 1539
BmrFI	CCNGG	3 cut(s)	339, 530, 1252
BmsI	GCATC	6 cut(s)	185, 504, 1264, 1354, 1397, 1693
BplI	GAGNNNNNCTC	4 cut(s)	355, 387, 652, 684
BpmI	CTGGAG	1 cut(s)	339
Bpu10I	CCTNAGC	1 cut(s)	1332
BpuEI	CTTGAG	4 cut(s)	559, 920, 1550, 1778
BsaBI	GATNNNNATC	1 cut(s)	1730
BsaJI	CCNNGG	7 cut(s)	90, 324, 343, 411, 529, 1200, 1251
BsaXI	ACNNNNNCTCC	2 cut(s)	312, 342
Bsc4I	CCNNNNNNNGG	5 cut(s)	110, 344, 380, 844, 1265
Bse1I	ACTGG	2 cut(s)	108, 1594
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	3 cut(s)	366, 514, 775
Bse8I	GATNNNNATC	1 cut(s)	1730
BseBI	CCWGG	3 cut(s)	339, 530, 1252
BseDI	CCNNGG	7 cut(s)	90, 324, 343, 411, 529, 1200, 1251
BseGI	GGATG	5 cut(s)	500, 744, 1279, 1388, 1708
BseJI	GATNNNNATC	1 cut(s)	1730
BseLI	CCNNNNNNNGG	5 cut(s)	110, 344, 380, 844, 1265
BseMI	GCAATG	3 cut(s)	366, 514, 775
BseMII	CTCAG	5 cut(s)	323, 1346, 1512, 1563, 1767
BseNI	ACTGG	2 cut(s)	108, 1594
BseRI	GAGGAG	1 cut(s)	1769
BseSI	GKGCMC	1 cut(s)	1097
BseXI	GCAGC	6 cut(s)	808, 859, 1169, 1388, 1558, 1612
BsgI	GTGCAG	3 cut(s)	937, 1185, 1611
Bsh1236I	CGCG	4 cut(s)	723, 1310, 1459, 1569
BshFI	GGCC	6 cut(s)	73, 342, 348, 1205, 1593, 1658
BshNI	GGYRCC	1 cut(s)	1224
BsiHKAI	GWGCWC	2 cut(s)	670, 1097
BsiHKCI	CYCGRG	1 cut(s)	746
BsiSI	CCGG	2 cut(s)	14, 504
BslFI	GGGAC	1 cut(s)	1539
BslI	CCNNNNNNNGG	5 cut(s)	110, 344, 380, 844, 1265
BsmAI	GTCTC	1 cut(s)	743
BsmFI	GGGAC	1 cut(s)	1539
BsmI	GAATGC	1 cut(s)	49
BsnI	GGCC	6 cut(s)	73, 342, 348, 1205, 1593, 1658
BsoBI	CYCGRG	1 cut(s)	746
Bsp1286I	GDGCHC	5 cut(s)	98, 670, 958, 1097, 1333
Bsp1407I	TGTACA	1 cut(s)	1619
Bsp143I	GATC	7 cut(s)	206, 457, 1042, 1067, 1131, 1460, 1731
Bsp19I	CCATGG	1 cut(s)	324
BspACI	CCGC	9 cut(s)	33, 105, 154, 197, 555, 558, 561, 1567, 1783
BspANI	GGCC	6 cut(s)	73, 342, 348, 1205, 1593, 1658
BspCNI	CTCAG	5 cut(s)	322, 1345, 1511, 1562, 1768
BspFNI	CGCG	4 cut(s)	723, 1310, 1459, 1569
BspHI	TCATGA	1 cut(s)	1428
BspLI	GGNNCC	9 cut(s)	97, 166, 322, 372, 408, 744, 1226, 1257, 1539
BspPI	GGATC	1 cut(s)	214
BspQI	GCTCTTC	1 cut(s)	1663
BspT107I	GGYRCC	1 cut(s)	1224
BsrDI	GCAATG	3 cut(s)	366, 514, 775
BsrGI	TGTACA	1 cut(s)	1619
BsrI	ACTGG	2 cut(s)	108, 1594
BssECI	CCNNGG	7 cut(s)	90, 324, 343, 411, 529, 1200, 1251
BssMI	GATC	7 cut(s)	206, 457, 1042, 1067, 1131, 1460, 1731
BssT1I	CCWWGG	3 cut(s)	324, 343, 411
Bst2UI	CCWGG	3 cut(s)	339, 530, 1252
Bst4CI	ACNGT	1 cut(s)	1619
Bst6I	CTCTTC	5 cut(s)	653, 672, 792, 1077, 1663
BstAPI	GCANNNNNTGC	2 cut(s)	881, 1163
BstAUI	TGTACA	1 cut(s)	1619
BstC8I	GCNNGC	2 cut(s)	1197, 1279
BstDEI	CTNAG	7 cut(s)	300, 309, 1332, 1498, 1549, 1664, 1776
BstDSI	CCRYGG	2 cut(s)	90, 324
BstEII	GGTNACC	1 cut(s)	524
BstF5I	GGATG	5 cut(s)	500, 744, 1279, 1388, 1708
BstFNI	CGCG	4 cut(s)	723, 1310, 1459, 1569
BstH2I	RGCGCY	1 cut(s)	263
BstHHI	GCGC	4 cut(s)	262, 725, 1459, 1571
BstKTI	GATC	7 cut(s)	209, 460, 1045, 1070, 1134, 1463, 1734
BstMAI	GTCTC	1 cut(s)	743
BstMBI	GATC	7 cut(s)	206, 457, 1042, 1067, 1131, 1460, 1731
BstNI	CCWGG	3 cut(s)	339, 530, 1252
BstNSI	RCATGY	1 cut(s)	1345
BstPI	GGTNACC	1 cut(s)	524
BstSCI	CCNGG	3 cut(s)	337, 528, 1250
BstSLI	GKGCMC	1 cut(s)	1097
BstUI	CGCG	4 cut(s)	723, 1310, 1459, 1569
BstV1I	GCAGC	6 cut(s)	808, 859, 1169, 1388, 1558, 1612
BstX2I	RGATCY	1 cut(s)	1067
BstYI	RGATCY	1 cut(s)	1067
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	6 cut(s)	73, 342, 348, 1205, 1593, 1658
BtgI	CCRYGG	2 cut(s)	90, 324
BtrI	CACGTC	1 cut(s)	335
BtsCI	GGATG	5 cut(s)	500, 744, 1279, 1388, 1708
BtsIMutI	CAGTG	3 cut(s)	115, 752, 1557
Cac8I	GCNNGC	2 cut(s)	1197, 1279
CaiI	CAGNNNCTG	1 cut(s)	1040
CciI	TCATGA	1 cut(s)	1428
CfoI	GCGC	4 cut(s)	262, 725, 1459, 1571
Cfr13I	GGNCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
CseI	GACGC	2 cut(s)	827, 1628
Csp6I	GTAC	2 cut(s)	297, 1620
CviAII	CATG	5 cut(s)	325, 448, 1342, 1423, 1429
CviQI	GTAC	2 cut(s)	297, 1620
DdeI	CTNAG	7 cut(s)	300, 309, 1332, 1498, 1549, 1664, 1776
DpnI	GATC	7 cut(s)	208, 459, 1044, 1069, 1133, 1462, 1733
DpnII	GATC	7 cut(s)	206, 457, 1042, 1067, 1131, 1460, 1731
DraIII	CACNNNGTG	1 cut(s)	137
EaeI	YGGCCR	1 cut(s)	71
Eam1104I	CTCTTC	5 cut(s)	653, 672, 792, 1077, 1663
EarI	CTCTTC	5 cut(s)	653, 672, 792, 1077, 1663
Eco130I	CCWWGG	3 cut(s)	324, 343, 411
Eco147I	AGGCCT	1 cut(s)	1205
Eco24I	GRGCYC	3 cut(s)	98, 958, 1333
Eco47I	GGWCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
Eco57I	CTGAAG	3 cut(s)	776, 1058, 1232
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	1 cut(s)	746
Eco91I	GGTNACC	1 cut(s)	524
EcoO109I	RGGNCCY	1 cut(s)	1537
EcoO65I	GGTNACC	1 cut(s)	524
EcoRII	CCWGG	3 cut(s)	337, 528, 1250
EcoT14I	CCWWGG	3 cut(s)	324, 343, 411
EcoT22I	ATGCAT	1 cut(s)	1369
EcoT38I	GRGCYC	3 cut(s)	98, 958, 1333
ErhI	CCWWGG	3 cut(s)	324, 343, 411
FaeI	CATG	5 cut(s)	328, 451, 1345, 1426, 1432
FalI	AAGNNNNNCTT	2 cut(s)	70, 102
FaqI	GGGAC	1 cut(s)	1539
FatI	CATG	5 cut(s)	324, 447, 1341, 1422, 1428
FauI	CCCGC	1 cut(s)	112
FauNDI	CATATG	1 cut(s)	1516
FbaI	TGATCA	4 cut(s)	457, 1042, 1131, 1731
FokI	GGATG	5 cut(s)	487, 751, 1286, 1375, 1715
FriOI	GRGCYC	3 cut(s)	98, 958, 1333
FspBI	CTAG	3 cut(s)	147, 1440, 1589
GlaI	GCGC	4 cut(s)	261, 724, 1458, 1570
GsuI	CTGGAG	1 cut(s)	339
HaeII	RGCGCY	1 cut(s)	263
HaeIII	GGCC	6 cut(s)	73, 342, 348, 1205, 1593, 1658
HapII	CCGG	2 cut(s)	14, 504
HgaI	GACGC	2 cut(s)	827, 1628
HhaI	GCGC	4 cut(s)	262, 725, 1459, 1571
Hin1II	CATG	5 cut(s)	328, 451, 1345, 1426, 1432
Hin6I	GCGC	4 cut(s)	260, 723, 1457, 1569
HinP1I	GCGC	4 cut(s)	260, 723, 1457, 1569
HincII	GTYRAC	1 cut(s)	1339
HindII	GTYRAC	1 cut(s)	1339
HinfI	GANTC	6 cut(s)	8, 376, 1169, 1356, 1400, 1494
HpaII	CCGG	2 cut(s)	14, 504
HphI	GGTGA	2 cut(s)	446, 452
Hpy166II	GTNNAC	2 cut(s)	1095, 1339
Hpy188I	TCNGA	7 cut(s)	169, 211, 375, 933, 1086, 1501, 1777
Hpy8I	GTNNAC	2 cut(s)	1095, 1339
Hpy99I	CGWCG	1 cut(s)	1364
HpyAV	CCTTC	7 cut(s)	110, 144, 225, 614, 1207, 1429, 1653
HpyCH4III	ACNGT	1 cut(s)	1619
HpyCH4IV	ACGT	2 cut(s)	334, 1765
HpyF3I	CTNAG	7 cut(s)	300, 309, 1332, 1498, 1549, 1664, 1776
HpySE526I	ACGT	2 cut(s)	334, 1765
Hsp92II	CATG	5 cut(s)	328, 451, 1345, 1426, 1432
HspAI	GCGC	4 cut(s)	260, 723, 1457, 1569
Ksp22I	TGATCA	4 cut(s)	457, 1042, 1131, 1731
Kzo9I	GATC	7 cut(s)	206, 457, 1042, 1067, 1131, 1460, 1731
LguI	GCTCTTC	1 cut(s)	1663
LmnI	GCTCC	9 cut(s)	60, 101, 170, 320, 356, 376, 673, 858, 1454
Lsp1109I	GCAGC	6 cut(s)	808, 859, 1169, 1388, 1558, 1612
LweI	GCATC	6 cut(s)	185, 504, 1264, 1354, 1397, 1693
MaeI	CTAG	3 cut(s)	147, 1440, 1589
MaeII	ACGT	2 cut(s)	334, 1765
MaeIII	GTNAC	7 cut(s)	140, 229, 251, 524, 533, 1304, 1321
MalI	GATC	7 cut(s)	208, 459, 1044, 1069, 1133, 1462, 1733
MboI	GATC	7 cut(s)	206, 457, 1042, 1067, 1131, 1460, 1731
MfeI	CAATTG	1 cut(s)	1608
MflI	RGATCY	1 cut(s)	1067
MhlI	GDGCHC	5 cut(s)	98, 670, 958, 1097, 1333
MlsI	TGGCCA	1 cut(s)	73
MluCI	AATT	4 cut(s)	825, 894, 906, 1608
MluNI	TGGCCA	1 cut(s)	73
MlyI	GAGTC	3 cut(s)	17, 385, 1394
Mox20I	TGGCCA	1 cut(s)	73
Mph1103I	ATGCAT	1 cut(s)	1369
MroXI	GAANNNNTTC	2 cut(s)	85, 927
MscI	TGGCCA	1 cut(s)	73
MseI	TTAA	4 cut(s)	390, 878, 1112, 1632
MslI	CAYNNNNRTG	1 cut(s)	1427
Msp20I	TGGCCA	1 cut(s)	73
MspA1I	CMGCKG	3 cut(s)	197, 1160, 1625
MspI	CCGG	2 cut(s)	14, 504
MspR9I	CCNGG	3 cut(s)	339, 530, 1252
MunI	CAATTG	1 cut(s)	1608
Mva1269I	GAATGC	1 cut(s)	49
MvaI	CCWGG	3 cut(s)	339, 530, 1252
MvnI	CGCG	4 cut(s)	723, 1310, 1459, 1569
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	1 cut(s)	1516
NdeII	GATC	7 cut(s)	206, 457, 1042, 1067, 1131, 1460, 1731
NlaIII	CATG	5 cut(s)	328, 451, 1345, 1426, 1432
NlaIV	GGNNCC	9 cut(s)	97, 166, 322, 372, 408, 744, 1226, 1257, 1539
NmeAIII	GCCGAG	1 cut(s)	1225
NmuCI	GTSAC	1 cut(s)	229
NsiI	ATGCAT	1 cut(s)	1369
NspI	RCATGY	1 cut(s)	1345
PagI	TCATGA	1 cut(s)	1428
PceI	AGGCCT	1 cut(s)	1205
PciI	ACATGT	1 cut(s)	1341
PciSI	GCTCTTC	1 cut(s)	1663
PcsI	WCGNNNNNNNCGW	1 cut(s)	1390
PctI	GAATGC	1 cut(s)	49
PdmI	GAANNNNTTC	2 cut(s)	85, 927
PfeI	GAWTC	3 cut(s)	1169, 1356, 1494
PflMI	CCANNNNNTGG	1 cut(s)	1265
PleI	GAGTC	3 cut(s)	16, 384, 1394
PpsI	GAGTC	3 cut(s)	16, 384, 1394
PpuMI	RGGWCCY	1 cut(s)	1537
PscI	ACATGT	1 cut(s)	1341
Psp5II	RGGWCCY	1 cut(s)	1537
Psp6I	CCWGG	3 cut(s)	337, 528, 1250
PspEI	GGTNACC	1 cut(s)	524
PspGI	CCWGG	3 cut(s)	337, 528, 1250
PspN4I	GGNNCC	9 cut(s)	97, 166, 322, 372, 408, 744, 1226, 1257, 1539
PspPI	GGNCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
PspPPI	RGGWCCY	1 cut(s)	1537
PstNI	CAGNNNCTG	1 cut(s)	1040
PsuI	RGATCY	1 cut(s)	1067
PvuII	CAGCTG	2 cut(s)	1160, 1625
RsaI	GTAC	2 cut(s)	298, 1621
RsaNI	GTAC	2 cut(s)	297, 1620
RseI	CAYNNNNRTG	1 cut(s)	1427
SapI	GCTCTTC	1 cut(s)	1663
SaqAI	TTAA	4 cut(s)	390, 878, 1112, 1632
Sau3AI	GATC	7 cut(s)	206, 457, 1042, 1067, 1131, 1460, 1731
Sau96I	GGNCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
ScaI	AGTACT	1 cut(s)	298
SchI	GAGTC	3 cut(s)	17, 385, 1394
ScrFI	CCNGG	3 cut(s)	339, 530, 1252
SduI	GDGCHC	5 cut(s)	98, 670, 958, 1097, 1333
SfaNI	GCATC	6 cut(s)	185, 504, 1264, 1354, 1397, 1693
SinI	GGWCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
SmiMI	CAYNNNNRTG	1 cut(s)	1427
SmlI	CTYRAG	4 cut(s)	538, 899, 1529, 1793
SmoI	CTYRAG	4 cut(s)	538, 899, 1529, 1793
Sse9I	AATT	4 cut(s)	825, 894, 906, 1608
SseBI	AGGCCT	1 cut(s)	1205
SsiI	CCGC	9 cut(s)	33, 105, 154, 197, 555, 558, 561, 1567, 1783
SspMI	CTAG	3 cut(s)	147, 1440, 1589
StuI	AGGCCT	1 cut(s)	1205
StyD4I	CCNGG	3 cut(s)	337, 528, 1250
StyI	CCWWGG	3 cut(s)	324, 343, 411
TaaI	ACNGT	1 cut(s)	1619
TaiI	ACGT	2 cut(s)	337, 1768
TaqI	TCGA	1 cut(s)	1359
TaqII	GACCGA	2 cut(s)	1283, 1569
TasI	AATT	4 cut(s)	825, 894, 906, 1608
TatI	WGTACW	2 cut(s)	296, 1619
TauI	GCSGC	5 cut(s)	36, 157, 200, 558, 561
TfiI	GAWTC	3 cut(s)	1169, 1356, 1494
Tru1I	TTAA	4 cut(s)	390, 878, 1112, 1632
Tru9I	TTAA	4 cut(s)	390, 878, 1112, 1632
TscAI	CASTG	3 cut(s)	115, 759, 1557
TseFI	GTSAC	1 cut(s)	229
TseI	GCWGC	6 cut(s)	821, 872, 1157, 1376, 1571, 1625
Tsp45I	GTSAC	1 cut(s)	229
TspDTI	ATGAA	6 cut(s)	207, 489, 656, 702, 840, 1698
TspGWI	ACGGA	1 cut(s)	73
TspRI	CASTG	3 cut(s)	115, 759, 1557
Van91I	CCANNNNNTGG	1 cut(s)	1265
VneI	GTGCAC	1 cut(s)	1093
VpaK11BI	GGWCC	7 cut(s)	742, 1031, 1216, 1256, 1295, 1537, 1581
XapI	RAATTY	1 cut(s)	894
XbaI	TCTAGA	1 cut(s)	146
XceI	RCATGY	1 cut(s)	1345
XmnI	GAANNNNTTC	2 cut(s)	85, 927
XspI	CTAG	3 cut(s)	147, 1440, 1589
ZrmI	AGTACT	1 cut(s)	298
Zsp2I	ATGCAT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.