Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0014560

Physical Location & Seq

Genomic Coordinates Reverse (-)

10293635 .. 10296313

Gene Structure 2679 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1027500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGGAGACTCACCGGAGAAGAAATCAGGTTGCGGCATCTTGAGTGCTGTTTTTGGGCGGAATAGTTTCTGGCCGAGAAGAACAACTTCTACGGGTTCTCTTCCGGTATCCAACAACAACAATGCCACGTTAGTTAAAACACCAAGCACTCCCAATTCCAAACGGCGTCGTGGTGGCTCCGATGAGGCTTCCTTCCTTGATTCATCAAACAATGTACCATCAGATTCATCGAAACCGATCACGAAGCCTTCCCAGTCTAGTAATAGGGCACCCCCTATACAACAGCAGCAGCAGCAGCAACAACAACAACAACACCACCAACACCACCAACAAAAAATGGCGCCAAGCCAAGGTTATGTGAACCAAGGCCGAAGGGTTCCAAAGGAGGCGGTGGGCATATCTGGGGAGCTTGAGAGCATGATTGCTGATCATCAAAAATCAAAAGGGAGTAGTAGCCTTGTTAGGGCTTCATCCAGCAATGTTATGCTTTTCGGAAATTTGGGTAACTTGAGACAACCTGGTGGTGGTGGTGGTGGAGGTGGCGAAAATGCAAGCCCGTATAATGTTCTTGATTATCTTCCAAGGACTGCTAGGGAGGACGCTCCAATGCCGACTCATGTAAACATGGGGAAGACAAGTACTGCTAGGGAAGAGAAGAGACAAAGTGAGCCGGAACCACCTGCTTCCTTATGTCGCGCATTGTCTACTAGAATGGACCCCGAAACATTGAAGATCATGGGCAATGAAGATTACAAGAACGGAAGATTTGCAGAAGCATTGGCTTTGTATGATGCTGCAATTTCTATTGACCCCAATAAGGCTTCTTATAGGAGCAACAAGAGTGCTGCATTAACCGCTCTAGGTGAAATTCTTGAGGCAATTTTTGAGTGTAGAGAAGCCATTCGGATAGAACCCCACTATCATAGGGCTCATCATCGTCTGGCAACATTATATCTTAGATTAGGGGAAGCAGAAAAAGCTTTGTATCACTACAAGCATGCTGGACCAGAGGCTGATCAAGAGGACATTGCTAAAGTAAAAACTCTTCAGGCCTGCCTGAACAAGTGCACAGAGGCTCGTAGGTTAAGAGATTGGAACACCCTCATAAAGGAATCCCAAAGCGTTATATTAGCCGGTGCAGATTCAGCGCCCCAGATATATGCTTTGCAAGCGGAGGCCTTGTTGAAGCTCAATAGGCACAAGGAAGCAGATGAAGCATTATCCAGGGGTCCAAATTTTGATGTTGATGCCTGCAACAAATTCTTTGGCCCAATTGGTAACGCGAATTTGTTAGCAACACGAGCTCAGGTGGACATGGTTGCTGGCAGATTGGATGATGCATTAGAGGCAGCTCAACGAGCATCACAGCTTGACTCAAACAACAGGGAAGCAAACATGGTCATGAGAAAGGCTCGAGCTGTTGCAGTAGCTCGATCAAAAGGCAATGAGCTTTTCAAGACAGCAAGGTTCTCAGAGGCATGTGTTGCATACGGCGAGGGACTTGAGCACGATCCTTATAACTCGGTGTTATTATGCAACCGTGCTGCTTGTCGTTCAAAACTTGGCCAACTAGATAAAGCAATTGAGGACTGTACAGCTGCCCTTAATGTCCGCCCATCTTACAGCAAGGCTAGATTGAGAAGAGCAGATTGCAATGCTAAGTTGAAAAAATGGGAAGCTTCAATACAAGACTATGAGATTTTGATAAAGGAAACACCAGAGGATGGGGAGGTAAACTGTGCTTTGTCTGAGGCGCGGGTGCAGCTCAGAAAACAGCGAGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_17 TPR_2 TPR_7 TPR_8 Thioredoxin

Protein Analysis

595

Amino Acids

65.16

Weight (kDa)

9.08

Isoelectric Point (pI)

57.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_11	PF13414	247 - 284	5.4e-06	TPR repeat
TPR_1	PF00515	510 - 541	2.4e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10090 AT5G65160
fragaria_vesca	FvH4_1g21140
malus_domestica	MD01G1027500.v1.1 MD15G1326400.v1.1
prunus_persica	Prupe.6G182700_v2.0.a1 Prupe.6G182700_v2.0.a1
pyrus_communis	pycom15g28750
rosa_chinensis	RchiOBHm_Chr2g0114921
rosa_laevigata	RLG00000018135
rosa_roxburghii	Rroxscaffold_2G00130450
rosa_rugosa	Rorug02G0191800
rosa_samantha	Rh2AG250600 Rh2BG260000 Rh2CG254800 Rh2DG258700
rosa_wichuraiana	Rw2G019530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1518
AarI	CACCTGC	1 cut(s)	688
Acc36I	ACCTGC	1 cut(s)	688
AccB1I	GGYRCC	2 cut(s)	268, 340
AccB7I	CCANNNNNTGG	1 cut(s)	1724
AccBSI	CCGCTC	1 cut(s)	857
AccI	GTMKAC	1 cut(s)	704
AccII	CGCG	3 cut(s)	696, 1283, 1756
AciI	CCGC	7 cut(s)	33, 58, 389, 855, 1172, 1612, 1756
AclWI	GGATC	1 cut(s)	1505
AcoI	YGGCCR	2 cut(s)	71, 1564
AcsI	RAATTY	5 cut(s)	496, 867, 1234, 1259, 1285
AcuI	CTGAAG	1 cut(s)	1031
AcyI	GRCGYC	2 cut(s)	166, 341
AfaI	GTAC	3 cut(s)	216, 640, 1594
AfiI	CCNNNNNNNGG	6 cut(s)	350, 463, 524, 817, 1108, 1724
AgsI	TTSAA	6 cut(s)	730, 1186, 1456, 1557, 1666, 1683
AjnI	CCWGG	2 cut(s)	517, 1223
Alw21I	GWGCWC	3 cut(s)	1070, 1306, 1509
Alw26I	GTCTC	2 cut(s)	505, 652
Alw44I	GTGCAC	1 cut(s)	1066
AlwI	GGATC	1 cut(s)	1505
AlwNI	CAGNNNCTG	1 cut(s)	1013
Ama87I	CYCGRG	1 cut(s)	1413
AoxI	GGCC	6 cut(s)	71, 367, 1050, 1176, 1267, 1564
ApaLI	GTGCAC	1 cut(s)	1066
ApoI	RAATTY	5 cut(s)	496, 867, 1234, 1259, 1285
Asp700I	GAANNNNTTC	3 cut(s)	65, 85, 900
AspLEI	GCGC	4 cut(s)	343, 698, 1150, 1756
AspS9I	GGNCC	4 cut(s)	715, 1004, 1229, 1268
AsuHPI	GGTGA	2 cut(s)	3, 875
AvaI	CYCGRG	1 cut(s)	1413
AvaII	GGWCC	3 cut(s)	715, 1004, 1229
BaeGI	GKGCMC	2 cut(s)	271, 1070
BalI	TGGCCA	1 cut(s)	1566
BanI	GGYRCC	2 cut(s)	268, 340
BanII	GRGCYC	2 cut(s)	931, 1306
BarI	GAAGNNNNNNTAC	4 cut(s)	1029, 1061, 1668, 1700
BauI	CACGAG	1 cut(s)	1299
BbsI	GAAGAC	1 cut(s)	638
Bbv12I	GWGCWC	3 cut(s)	1070, 1306, 1509
BccI	CCATC	3 cut(s)	226, 1624, 1718
BceAI	ACGGC	2 cut(s)	179, 1507
BciT130I	CCWGG	2 cut(s)	519, 1225
BciVI	GTATCC	1 cut(s)	118
BclI	TGATCA	2 cut(s)	427, 1015
BcoDI	GTCTC	2 cut(s)	505, 652
BfaI	CTAG	8 cut(s)	258, 591, 645, 708, 860, 1571, 1632, 1783
BfoI	RGCGCY	2 cut(s)	344, 1151
BfuAI	ACCTGC	1 cut(s)	688
BfuI	GTATCC	1 cut(s)	118
BmcAI	AGTACT	1 cut(s)	640
Bme1390I	CCNGG	2 cut(s)	519, 1225
Bme18I	GGWCC	3 cut(s)	715, 1004, 1229
BmeT110I	CYCGRG	1 cut(s)	1413
BmgT120I	GGNCC	4 cut(s)	715, 1004, 1229, 1268
BmiI	GGNNCC	7 cut(s)	178, 270, 342, 378, 675, 717, 1230
BmrFI	CCNGG	2 cut(s)	519, 1225
BmrI	ACTGGG	1 cut(s)	247
BmsI	GCATC	5 cut(s)	45, 781, 1237, 1327, 1370
BmuI	ACTGGG	1 cut(s)	247
BpiI	GAAGAC	1 cut(s)	638
BplI	GAGNNNNNCTC	2 cut(s)	1396, 1428
Bpu10I	CCTNAGC	1 cut(s)	1305
BpuEI	CTTGAG	5 cut(s)	61, 431, 529, 893, 1523
BsaHI	GRCGYC	2 cut(s)	166, 341
BsaJI	CCNNGG	4 cut(s)	349, 364, 581, 1224
BsaWI	WCCGGW	2 cut(s)	13, 103
BsaXI	ACNNNNNCTCC	2 cut(s)	1166, 1196
Bsc4I	CCNNNNNNNGG	6 cut(s)	350, 463, 524, 817, 1108, 1724
Bse118I	RCCGGY	1 cut(s)	1133
Bse1I	ACTGG	1 cut(s)	253
Bse3DI	GCAATG	5 cut(s)	484, 748, 1026, 1450, 1660
BseBI	CCWGG	2 cut(s)	519, 1225
BseDI	CCNNGG	4 cut(s)	349, 364, 581, 1224
BseGI	GGATG	3 cut(s)	470, 1339, 1729
BseLI	CCNNNNNNNGG	6 cut(s)	350, 463, 524, 817, 1108, 1724
BseMI	GCAATG	5 cut(s)	484, 748, 1026, 1450, 1660
BseMII	CTCAG	4 cut(s)	1319, 1485, 1740, 1780
BseNI	ACTGG	1 cut(s)	253
BseSI	GKGCMC	2 cut(s)	271, 1070
BsgI	GTGCAG	2 cut(s)	1158, 1781
Bsh1236I	CGCG	3 cut(s)	696, 1283, 1756
BshFI	GGCC	6 cut(s)	73, 369, 1052, 1178, 1269, 1566
BshNI	GGYRCC	2 cut(s)	268, 340
BsiHKAI	GWGCWC	3 cut(s)	1070, 1306, 1509
BsiHKCI	CYCGRG	1 cut(s)	1413
BsiSI	CCGG	4 cut(s)	14, 104, 671, 1134
BslFI	GGGAC	1 cut(s)	1512
BslI	CCNNNNNNNGG	6 cut(s)	350, 463, 524, 817, 1108, 1724
BsmAI	GTCTC	2 cut(s)	505, 652
BsmFI	GGGAC	1 cut(s)	1512
BsnI	GGCC	6 cut(s)	73, 369, 1052, 1178, 1269, 1566
BsoBI	CYCGRG	1 cut(s)	1413
Bsp1286I	GDGCHC	5 cut(s)	271, 931, 1070, 1306, 1509
Bsp1407I	TGTACA	1 cut(s)	1592
Bsp143I	GATC	6 cut(s)	237, 427, 732, 1015, 1433, 1510
BspACI	CCGC	7 cut(s)	33, 58, 389, 855, 1172, 1612, 1756
BspANI	GGCC	6 cut(s)	73, 369, 1052, 1178, 1269, 1566
BspCNI	CTCAG	4 cut(s)	1318, 1484, 1741, 1779
BspFNI	CGCG	3 cut(s)	696, 1283, 1756
BspHI	TCATGA	1 cut(s)	1401
BspLI	GGNNCC	7 cut(s)	178, 270, 342, 378, 675, 717, 1230
BspMI	ACCTGC	1 cut(s)	688
BspPI	GGATC	1 cut(s)	1505
BspQI	GCTCTTC	1 cut(s)	1636
BspT107I	GGYRCC	2 cut(s)	268, 340
BsrBI	CCGCTC	1 cut(s)	857
BsrDI	GCAATG	5 cut(s)	484, 748, 1026, 1450, 1660
BsrFI	RCCGGY	1 cut(s)	1133
BsrGI	TGTACA	1 cut(s)	1592
BsrI	ACTGG	1 cut(s)	253
BssAI	RCCGGY	1 cut(s)	1133
BssECI	CCNNGG	4 cut(s)	349, 364, 581, 1224
BssMI	GATC	6 cut(s)	237, 427, 732, 1015, 1433, 1510
BssNI	GRCGYC	2 cut(s)	166, 341
BssSI	CACGAG	1 cut(s)	1299
BssT1I	CCWWGG	3 cut(s)	349, 364, 581
Bst2BI	CACGAG	1 cut(s)	1299
Bst2UI	CCWGG	2 cut(s)	519, 1225
Bst4CI	ACNGT	3 cut(s)	1541, 1592, 1739
Bst6I	CTCTTC	5 cut(s)	105, 645, 650, 1050, 1636
BstACI	GRCGYC	2 cut(s)	166, 341
BstAPI	GCANNNNNTGC	1 cut(s)	1484
BstAUI	TGTACA	1 cut(s)	1592
BstC8I	GCNNGC	6 cut(s)	553, 999, 1054, 1170, 1252, 1324
BstDEI	CTNAG	6 cut(s)	956, 1305, 1471, 1659, 1749, 1766
BstENI	CCTNNNNNAGG	1 cut(s)	1106
BstF5I	GGATG	3 cut(s)	470, 1339, 1729
BstFNI	CGCG	3 cut(s)	696, 1283, 1756
BstH2I	RGCGCY	2 cut(s)	344, 1151
BstHHI	GCGC	4 cut(s)	343, 698, 1150, 1756
BstKTI	GATC	6 cut(s)	240, 430, 735, 1018, 1436, 1513
BstMAI	GTCTC	2 cut(s)	505, 652
BstMBI	GATC	6 cut(s)	237, 427, 732, 1015, 1433, 1510
BstNI	CCWGG	2 cut(s)	519, 1225
BstNSI	RCATGY	2 cut(s)	1001, 1482
BstSCI	CCNGG	2 cut(s)	517, 1223
BstSLI	GKGCMC	2 cut(s)	271, 1070
BstUI	CGCG	3 cut(s)	696, 1283, 1756
BstV2I	GAAGAC	1 cut(s)	638
BsuI	GTATCC	1 cut(s)	118
BsuRI	GGCC	6 cut(s)	73, 369, 1052, 1178, 1269, 1566
BtsCI	GGATG	3 cut(s)	470, 1339, 1729
BveI	ACCTGC	1 cut(s)	688
Cac8I	GCNNGC	6 cut(s)	553, 999, 1054, 1170, 1252, 1324
CaiI	CAGNNNCTG	1 cut(s)	1013
CciI	TCATGA	1 cut(s)	1401
CfoI	GCGC	4 cut(s)	343, 698, 1150, 1756
Cfr10I	RCCGGY	1 cut(s)	1133
Cfr13I	GGNCC	4 cut(s)	715, 1004, 1229, 1268
CseI	GACGC	2 cut(s)	155, 608
CsiI	ACCWGGT	1 cut(s)	517
Csp6I	GTAC	3 cut(s)	215, 639, 1593
CviAII	CATG	9 cut(s)	418, 617, 625, 736, 998, 1315, 1396, 1402, 1479
CviQI	GTAC	3 cut(s)	215, 639, 1593
DdeI	CTNAG	6 cut(s)	956, 1305, 1471, 1659, 1749, 1766
DinI	GGCGCC	1 cut(s)	342
DpnI	GATC	6 cut(s)	239, 429, 734, 1017, 1435, 1512
DpnII	GATC	6 cut(s)	237, 427, 732, 1015, 1433, 1510
EaeI	YGGCCR	2 cut(s)	71, 1564
Eam1104I	CTCTTC	5 cut(s)	105, 645, 650, 1050, 1636
EarI	CTCTTC	5 cut(s)	105, 645, 650, 1050, 1636
EciI	GGCGGA	2 cut(s)	73, 1601
Ecl136II	GAGCTC	1 cut(s)	1304
Eco130I	CCWWGG	3 cut(s)	349, 364, 581
Eco147I	AGGCCT	2 cut(s)	1052, 1178
Eco24I	GRGCYC	2 cut(s)	931, 1306
Eco47I	GGWCC	3 cut(s)	715, 1004, 1229
Eco53kI	GAGCTC	1 cut(s)	1304
Eco57I	CTGAAG	1 cut(s)	1031
Eco88I	CYCGRG	1 cut(s)	1413
EcoICRI	GAGCTC	1 cut(s)	1304
EcoNI	CCTNNNNNAGG	1 cut(s)	1106
EcoRII	CCWGG	2 cut(s)	517, 1223
EcoT14I	CCWWGG	3 cut(s)	349, 364, 581
EcoT22I	ATGCAT	1 cut(s)	1342
EcoT38I	GRGCYC	2 cut(s)	931, 1306
EgeI	GGCGCC	1 cut(s)	342
EheI	GGCGCC	1 cut(s)	342
ErhI	CCWWGG	3 cut(s)	349, 364, 581
FaeI	CATG	9 cut(s)	421, 620, 628, 739, 1001, 1318, 1399, 1405, 1482
FalI	AAGNNNNNCTT	2 cut(s)	70, 102
FaqI	GGGAC	1 cut(s)	1512
FatI	CATG	9 cut(s)	417, 616, 624, 735, 997, 1314, 1395, 1401, 1478
FauI	CCCGC	1 cut(s)	1749
FbaI	TGATCA	2 cut(s)	427, 1015
FblI	GTMKAC	1 cut(s)	704
FokI	GGATG	3 cut(s)	457, 1346, 1736
FriOI	GRGCYC	2 cut(s)	931, 1306
FspBI	CTAG	8 cut(s)	258, 591, 645, 708, 860, 1571, 1632, 1783
GlaI	GCGC	4 cut(s)	342, 697, 1149, 1755
HaeII	RGCGCY	2 cut(s)	344, 1151
HaeIII	GGCC	6 cut(s)	73, 369, 1052, 1178, 1269, 1566
HapII	CCGG	4 cut(s)	14, 104, 671, 1134
HgaI	GACGC	2 cut(s)	155, 608
HhaI	GCGC	4 cut(s)	343, 698, 1150, 1756
Hin1I	GRCGYC	2 cut(s)	166, 341
Hin1II	CATG	9 cut(s)	421, 620, 628, 739, 1001, 1318, 1399, 1405, 1482
Hin6I	GCGC	4 cut(s)	341, 696, 1148, 1754
HinP1I	GCGC	4 cut(s)	341, 696, 1148, 1754
HindIII	AAGCTT	2 cut(s)	978, 1677
HinfI	GANTC	7 cut(s)	8, 200, 224, 613, 1112, 1142, 1373
HpaII	CCGG	4 cut(s)	14, 104, 671, 1134
HphI	GGTGA	2 cut(s)	3, 875
Hpy166II	GTNNAC	6 cut(s)	361, 622, 705, 1068, 1312, 1735
Hpy188I	TCNGA	7 cut(s)	181, 223, 494, 906, 1474, 1750, 1769
Hpy188III	TCNNGA	7 cut(s)	40, 241, 569, 872, 1019, 1402, 1456
Hpy8I	GTNNAC	6 cut(s)	361, 622, 705, 1068, 1312, 1735
Hpy99I	CGWCG	1 cut(s)	171
HpyAV	CCTTC	3 cut(s)	202, 258, 366
HpyCH4III	ACNGT	3 cut(s)	1541, 1592, 1739
HpyCH4IV	ACGT	1 cut(s)	128
HpyF3I	CTNAG	6 cut(s)	956, 1305, 1471, 1659, 1749, 1766
HpySE526I	ACGT	1 cut(s)	128
Hsp92I	GRCGYC	2 cut(s)	166, 341
Hsp92II	CATG	9 cut(s)	421, 620, 628, 739, 1001, 1318, 1399, 1405, 1482
HspAI	GCGC	4 cut(s)	341, 696, 1148, 1754
KasI	GGCGCC	1 cut(s)	340
Ksp22I	TGATCA	2 cut(s)	427, 1015
Kzo9I	GATC	6 cut(s)	237, 427, 732, 1015, 1433, 1510
LguI	GCTCTTC	1 cut(s)	1636
LmnI	GCTCC	4 cut(s)	182, 406, 607, 831
LweI	GCATC	5 cut(s)	45, 781, 1237, 1327, 1370
MabI	ACCWGGT	1 cut(s)	517
MaeI	CTAG	8 cut(s)	258, 591, 645, 708, 860, 1571, 1632, 1783
MaeII	ACGT	1 cut(s)	128
MaeIII	GTNAC	2 cut(s)	503, 1277
MalI	GATC	6 cut(s)	239, 429, 734, 1017, 1435, 1512
MbiI	CCGCTC	1 cut(s)	857
MboI	GATC	6 cut(s)	237, 427, 732, 1015, 1433, 1510
MfeI	CAATTG	2 cut(s)	1272, 1581
MhlI	GDGCHC	5 cut(s)	271, 931, 1070, 1306, 1509
MlsI	TGGCCA	1 cut(s)	1566
MluNI	TGGCCA	1 cut(s)	1566
Mly113I	GGCGCC	1 cut(s)	341
MlyI	GAGTC	3 cut(s)	2, 607, 1367
MmeI	TCCRAC	1 cut(s)	135
Mox20I	TGGCCA	1 cut(s)	1566
Mph1103I	ATGCAT	1 cut(s)	1342
MroXI	GAANNNNTTC	3 cut(s)	65, 85, 900
MscI	TGGCCA	1 cut(s)	1566
MseI	TTAA	4 cut(s)	135, 851, 1085, 1605
MslI	CAYNNNNRTG	1 cut(s)	1400
Msp20I	TGGCCA	1 cut(s)	1566
MspA1I	CMGCKG	1 cut(s)	1598
MspI	CCGG	4 cut(s)	14, 104, 671, 1134
MspR9I	CCNGG	2 cut(s)	519, 1225
MunI	CAATTG	2 cut(s)	1272, 1581
MvaI	CCWGG	2 cut(s)	519, 1225
MvnI	CGCG	3 cut(s)	696, 1283, 1756
NarI	GGCGCC	1 cut(s)	341
NdeII	GATC	6 cut(s)	237, 427, 732, 1015, 1433, 1510
NlaIII	CATG	9 cut(s)	421, 620, 628, 739, 1001, 1318, 1399, 1405, 1482
NlaIV	GGNNCC	7 cut(s)	178, 270, 342, 378, 675, 717, 1230
NmeAIII	GCCGAG	1 cut(s)	99
NsiI	ATGCAT	1 cut(s)	1342
NspI	RCATGY	2 cut(s)	1001, 1482
PaeI	GCATGC	1 cut(s)	1001
PaeR7I	CTCGAG	1 cut(s)	1413
PagI	TCATGA	1 cut(s)	1401
PaqCI	CACCTGC	1 cut(s)	688
PceI	AGGCCT	2 cut(s)	1052, 1178
PciSI	GCTCTTC	1 cut(s)	1636
PdmI	GAANNNNTTC	3 cut(s)	65, 85, 900
PfeI	GAWTC	4 cut(s)	200, 224, 1112, 1142
PflMI	CCANNNNNTGG	1 cut(s)	1724
PleI	GAGTC	3 cut(s)	2, 607, 1367
PluTI	GGCGCC	1 cut(s)	344
PpsI	GAGTC	3 cut(s)	2, 607, 1367
PsiI	TTATAA	1 cut(s)	1518
Psp124BI	GAGCTC	1 cut(s)	1306
Psp6I	CCWGG	2 cut(s)	517, 1223
PspGI	CCWGG	2 cut(s)	517, 1223
PspN4I	GGNNCC	7 cut(s)	178, 270, 342, 378, 675, 717, 1230
PspPI	GGNCC	4 cut(s)	715, 1004, 1229, 1268
PspXI	VCTCGAGB	1 cut(s)	1413
PsrI	GAACNNNNNNTAC	2 cut(s)	73, 105
PstNI	CAGNNNCTG	1 cut(s)	1013
PvuII	CAGCTG	1 cut(s)	1598
RsaI	GTAC	3 cut(s)	216, 640, 1594
RsaNI	GTAC	3 cut(s)	215, 639, 1593
RseI	CAYNNNNRTG	1 cut(s)	1400
SacI	GAGCTC	1 cut(s)	1306
SapI	GCTCTTC	1 cut(s)	1636
SaqAI	TTAA	4 cut(s)	135, 851, 1085, 1605
Sau3AI	GATC	6 cut(s)	237, 427, 732, 1015, 1433, 1510
Sau96I	GGNCC	4 cut(s)	715, 1004, 1229, 1268
ScaI	AGTACT	1 cut(s)	640
SchI	GAGTC	3 cut(s)	2, 607, 1367
ScrFI	CCNGG	2 cut(s)	519, 1225
SduI	GDGCHC	5 cut(s)	271, 931, 1070, 1306, 1509
SexAI	ACCWGGT	1 cut(s)	517
SfaNI	GCATC	5 cut(s)	45, 781, 1237, 1327, 1370
SfoI	GGCGCC	1 cut(s)	342
Sfr274I	CTCGAG	1 cut(s)	1413
SinI	GGWCC	3 cut(s)	715, 1004, 1229
SlaI	CTCGAG	1 cut(s)	1413
SmiMI	CAYNNNNRTG	1 cut(s)	1400
SmlI	CTYRAG	6 cut(s)	40, 410, 508, 872, 1413, 1502
SmoI	CTYRAG	6 cut(s)	40, 410, 508, 872, 1413, 1502
SphI	GCATGC	1 cut(s)	1001
SseBI	AGGCCT	2 cut(s)	1052, 1178
SsiI	CCGC	7 cut(s)	33, 58, 389, 855, 1172, 1612, 1756
SspDI	GGCGCC	1 cut(s)	340
SspMI	CTAG	8 cut(s)	258, 591, 645, 708, 860, 1571, 1632, 1783
SstI	GAGCTC	1 cut(s)	1306
StuI	AGGCCT	2 cut(s)	1052, 1178
StyD4I	CCNGG	2 cut(s)	517, 1223
StyI	CCWWGG	3 cut(s)	349, 364, 581
TaaI	ACNGT	3 cut(s)	1541, 1592, 1739
TaiI	ACGT	1 cut(s)	131
TaqI	TCGA	3 cut(s)	230, 1414, 1432
TatI	WGTACW	2 cut(s)	638, 1592
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	4 cut(s)	200, 224, 1112, 1142
Tru1I	TTAA	4 cut(s)	135, 851, 1085, 1605
Tru9I	TTAA	4 cut(s)	135, 851, 1085, 1605
TspDTI	ATGAA	5 cut(s)	192, 216, 459, 759, 1227
TspGWI	ACGGA	1 cut(s)	774
Van91I	CCANNNNNTGG	1 cut(s)	1724
VneI	GTGCAC	1 cut(s)	1066
VpaK11BI	GGWCC	3 cut(s)	715, 1004, 1229
XagI	CCTNNNNNAGG	1 cut(s)	1106
XapI	RAATTY	5 cut(s)	496, 867, 1234, 1259, 1285
XceI	RCATGY	2 cut(s)	1001, 1482
XhoI	CTCGAG	1 cut(s)	1413
XmiI	GTMKAC	1 cut(s)	704
XmnI	GAANNNNTTC	3 cut(s)	65, 85, 900
XspI	CTAG	8 cut(s)	258, 591, 645, 708, 860, 1571, 1632, 1783
ZrmI	AGTACT	1 cut(s)	640
Zsp2I	ATGCAT	1 cut(s)	1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.