Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0014560

Physical Location & Seq

Genomic Coordinates Forward (+)

26827696 .. 26830751

Gene Structure 3056 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48813

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGGAGAGTCGCCGGAGAAGAAATCAGGTTGCGGCATTTTGAATGCTGTGTTTGGACGGAGCAGTTTTTGGCCAAGAAGAACAACTTCCACGGGCTCCCTTCCCGTCAGTGGCAATCAGTTTGTGAAAACACCAAGTGGTAACTCTAGAAGGCGGCGTGGTGGCTCCGATGAGGCATCATTTCTTGACATGTCATCGGCTAATGGATCAGAATCTTCATCAAAACCCGTCACAAAACCATCTCAATATAGTAACAGAGCGCCCCCTACACAGCCACATCAAAATCAGGGTAGAAGTACCAAGCCACCTCAGGAAGCTGGAGCCATGGTTTCACGTCCAGGCCAAGGCCAACAAGGAGCAATGAGAATGGCTCCGAGTCAAGGTTATGTTAATCAAGGCAAAAGGGTTCCCAAGGAAGCAGTTGGGTTGTCTGGTGAGCTTGATAGCATGATTACTGATCACCAGAAATCAAAAGGGAGTAGCACATTCGTTAGAGCTTCATCCGGCAATGTGATGCTTTTTGGTAACCTGGGTAACTTGAGAACAGGAGGTGGTGGAGGCGGTGGTGGAAATGCGAACTCAAATAACGTGCTGGATTACCTTCCAAAGACAGCAAGAGAAGAAACCCCAATGATGATGAATGGAAATGTAGGGAAGAGTAGTGCTCCTAAAGAAGATAAAAAACCAAGTTCGCAAAATCAGCCTACTTCATTTTGTCGCGCATTATCAACAAGGATGGACCCCGAGACACTGAAGATTATGGGCAATGAGGATTACAAGAATGGAAGATTTGAAGAGGCTCTGTCTTTGTATGACGCCGCAATTTCTATTGACCCCGATAAGGCTTCATATAGGAGCAACAAGAGTGCTGCATTAACTGCTCTTGGTCAAATTCTTGAGGCAATTTTTGAGTGCAGAGAAGCCATTCGGATTGAACCTCATTATCATAGGGCTCACCATCGTCTTGCAACCTTATACATTAGATTAGGGGAAGCTGAAAAAGCTACATATCACTATAAACATTCTGGACCAGAGGCTGATCAAGAGGACTTGGCTAAAGTGAGATCTCTTCAGGCTCTTCTGAACAAGTGCACAGAGGCTCGTAGGTTAAGAGATTGGAACACCTTGATCAAGGAAACACAAAACGTTATAGCAGCTGGTGCAGATTCAGCACCACAGATATTTTCTTTGCAAGCCGAGGCCTTGCTGAAGGTCCATAGGCACCAAGAAGCAGATGAGGCTTTATCCAGGGGTCCAAACTTTGGGGTGGATGCTTGCACTAAATACTTCGGTCCTATTAGTAACGCGAGTATGTTAGTAACAAGGGCTCAGGTTGACATGTGTGCTGGAAGAATCGACGATGCATTGGAGGCAGCTCAACGAGCATCCCGTCTTGACTCAAACAACAAGGAAGCAAACATGGTCATGAGGAAGGCTAGAGCTGTTGCAGGAGCGCGATCAAAGGGTAATGAGCTATTCAAGACATCAAGATTCTCAGAGGCTTGTGTTGCATATGGGGAGGGACTTGAGCAGGACCCTTATAACTCAGTGTTGTTATGCAACCGCGCTGCTTGTCGGTCCAAACTTGGCCAGTTTGACCAAGCAATTGAGGACTGTACAGCTGCACTTAATGTGCGTCCTTCTTACAGCAAGGCCAGACTAAGAAGAGCAGATTGCAATGCCAAGTTGGGAAAATGGGATGCTTCATTACAGGACTATGAGATTTTGATCAAGCAAACACCAGATGATGAGGAGATAAAACGTGCTTTGTCTGAGGTGCGGACACAGCTCAAGAAAAAGCGAGGTGAGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_17 TPR_2 TPR_7 TPR_8 Thioredoxin

Protein Analysis

604

Amino Acids

65.81

Weight (kDa)

9.33

Isoelectric Point (pI)

48.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_11	PF13414	255 - 287	3.9e-06	TPR repeat
TPR_1	PF00515	518 - 549	1.1e-06	Tetratricopeptide repeat
TPR_16	PF13432	528 - 583	7.9e-06	Tetratricopeptide repeat
TPR_19	PF14559	529 - 591	4.3e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10090 AT5G65160
fragaria_vesca	FvH4_1g21140
malus_domestica	MD01G1027500.v1.1 MD15G1326400.v1.1
prunus_persica	Prupe.6G182700_v2.0.a1 Prupe.6G182700_v2.0.a1
pyrus_communis	pycom15g28750
rosa_chinensis	RchiOBHm_Chr2g0114921
rosa_laevigata	RLG00000018135
rosa_roxburghii	Rroxscaffold_2G00130450
rosa_rugosa	Rorug02G0191800
rosa_samantha	Rh2AG250600 Rh2BG260000 Rh2CG254800 Rh2DG258700
rosa_wichuraiana	Rw2G019530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1542
AccB1I	GGYRCC	1 cut(s)	1221
AccB7I	CCANNNNNTGG	1 cut(s)	1262
AccII	CGCG	4 cut(s)	720, 1307, 1456, 1566
AciI	CCGC	6 cut(s)	33, 154, 561, 819, 1564, 1780
AclI	AACGTT	1 cut(s)	1146
AclWI	GGATC	1 cut(s)	214
AcoI	YGGCCR	2 cut(s)	71, 1588
AcsI	RAATTY	1 cut(s)	891
AcuI	CTGAAG	3 cut(s)	773, 1055, 1229
AcyI	GRCGYC	1 cut(s)	816
AdeI	CACNNNGTG	1 cut(s)	137
AfaI	GTAC	2 cut(s)	298, 1618
AfiI	CCNNNNNNNGG	5 cut(s)	110, 344, 380, 841, 1262
AflIII	ACRYGT	2 cut(s)	189, 1338
AgsI	TTSAA	4 cut(s)	43, 794, 935, 1480
AjiI	CACGTC	1 cut(s)	335
AjnI	CCWGG	3 cut(s)	337, 528, 1247
Alw21I	GWGCWC	2 cut(s)	667, 1094
Alw26I	GTCTC	1 cut(s)	740
Alw44I	GTGCAC	1 cut(s)	1090
AlwI	GGATC	1 cut(s)	214
AlwNI	CAGNNNCTG	1 cut(s)	1037
Ama87I	CYCGRG	1 cut(s)	743
AoxI	GGCC	6 cut(s)	71, 340, 346, 1200, 1588, 1653
ApaLI	GTGCAC	1 cut(s)	1090
ApeKI	GCWGC	5 cut(s)	869, 1154, 1373, 1568, 1622
ApoI	RAATTY	1 cut(s)	891
Asp700I	GAANNNNTTC	2 cut(s)	85, 924
AspLEI	GCGC	4 cut(s)	262, 722, 1456, 1568
AspS9I	GGNCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
AsuHPI	GGTGA	3 cut(s)	446, 452, 947
AvaI	CYCGRG	1 cut(s)	743
AvaII	GGWCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
AxyI	CCTNAGG	1 cut(s)	309
BaeGI	GKGCMC	1 cut(s)	1094
BalI	TGGCCA	2 cut(s)	73, 1590
BanI	GGYRCC	1 cut(s)	1221
BanII	GRGCYC	3 cut(s)	98, 955, 1330
Bbv12I	GWGCWC	2 cut(s)	667, 1094
BbvI	GCAGC	5 cut(s)	856, 1166, 1385, 1555, 1609
BccI	CCATC	3 cut(s)	247, 730, 966
BciT130I	CCWGG	3 cut(s)	339, 530, 1249
BclI	TGATCA	4 cut(s)	457, 1039, 1128, 1728
BcoDI	GTCTC	1 cut(s)	740
BfaI	CTAG	2 cut(s)	147, 1437
BfoI	RGCGCY	1 cut(s)	263
BglII	AGATCT	1 cut(s)	1064
BisI	GCNGC	8 cut(s)	34, 155, 819, 870, 1155, 1374, 1569, 1623
BlsI	GCNGC	8 cut(s)	35, 156, 820, 871, 1156, 1375, 1570, 1624
Bme1390I	CCNGG	3 cut(s)	339, 530, 1249
Bme18I	GGWCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
BmeT110I	CYCGRG	1 cut(s)	743
BmgBI	CACGTC	1 cut(s)	335
BmgT120I	GGNCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
BmiI	GGNNCC	9 cut(s)	97, 166, 322, 372, 408, 741, 1223, 1254, 1536
BmrFI	CCNGG	3 cut(s)	339, 530, 1249
BmsI	GCATC	6 cut(s)	185, 504, 1261, 1351, 1394, 1690
BplI	GAGNNNNNCTC	4 cut(s)	355, 387, 649, 681
BpmI	CTGGAG	1 cut(s)	339
Bpu10I	CCTNAGC	1 cut(s)	1329
BpuEI	CTTGAG	4 cut(s)	559, 917, 1547, 1775
BsaBI	GATNNNNATC	2 cut(s)	211, 1727
BsaHI	GRCGYC	1 cut(s)	816
BsaJI	CCNNGG	7 cut(s)	90, 324, 343, 411, 529, 1197, 1248
BsaXI	ACNNNNNCTCC	2 cut(s)	312, 342
Bsc4I	CCNNNNNNNGG	5 cut(s)	110, 344, 380, 841, 1262
Bse1I	ACTGG	1 cut(s)	1591
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	4 cut(s)	366, 514, 772, 1684
Bse8I	GATNNNNATC	2 cut(s)	211, 1727
BseBI	CCWGG	3 cut(s)	339, 530, 1249
BseDI	CCNNGG	7 cut(s)	90, 324, 343, 411, 529, 1197, 1248
BseGI	GGATG	5 cut(s)	500, 741, 1276, 1385, 1705
BseJI	GATNNNNATC	2 cut(s)	211, 1727
BseLI	CCNNNNNNNGG	5 cut(s)	110, 344, 380, 841, 1262
BseMI	GCAATG	4 cut(s)	366, 514, 772, 1684
BseMII	CTCAG	5 cut(s)	323, 1343, 1509, 1560, 1764
BseNI	ACTGG	1 cut(s)	1591
BseRI	GAGGAG	1 cut(s)	1766
BseSI	GKGCMC	1 cut(s)	1094
BseXI	GCAGC	5 cut(s)	856, 1166, 1385, 1555, 1609
BsgI	GTGCAG	3 cut(s)	934, 1182, 1608
Bsh1236I	CGCG	4 cut(s)	720, 1307, 1456, 1566
BshFI	GGCC	6 cut(s)	73, 342, 348, 1202, 1590, 1655
BshNI	GGYRCC	1 cut(s)	1221
BsiHKAI	GWGCWC	2 cut(s)	667, 1094
BsiHKCI	CYCGRG	1 cut(s)	743
BsiSI	CCGG	2 cut(s)	14, 504
BslFI	GGGAC	1 cut(s)	1536
BslI	CCNNNNNNNGG	5 cut(s)	110, 344, 380, 841, 1262
BsmAI	GTCTC	1 cut(s)	740
BsmFI	GGGAC	1 cut(s)	1536
BsmI	GAATGC	1 cut(s)	49
BsnI	GGCC	6 cut(s)	73, 342, 348, 1202, 1590, 1655
BsoBI	CYCGRG	1 cut(s)	743
Bsp1286I	GDGCHC	5 cut(s)	98, 667, 955, 1094, 1330
Bsp1407I	TGTACA	1 cut(s)	1616
Bsp143I	GATC	7 cut(s)	206, 457, 1039, 1064, 1128, 1457, 1728
Bsp19I	CCATGG	1 cut(s)	324
BspACI	CCGC	6 cut(s)	33, 154, 561, 819, 1564, 1780
BspANI	GGCC	6 cut(s)	73, 342, 348, 1202, 1590, 1655
BspCNI	CTCAG	5 cut(s)	322, 1342, 1508, 1559, 1765
BspFNI	CGCG	4 cut(s)	720, 1307, 1456, 1566
BspHI	TCATGA	1 cut(s)	1425
BspLI	GGNNCC	9 cut(s)	97, 166, 322, 372, 408, 741, 1223, 1254, 1536
BspPI	GGATC	1 cut(s)	214
BspQI	GCTCTTC	2 cut(s)	1083, 1660
BspT107I	GGYRCC	1 cut(s)	1221
BsrDI	GCAATG	4 cut(s)	366, 514, 772, 1684
BsrGI	TGTACA	1 cut(s)	1616
BsrI	ACTGG	1 cut(s)	1591
BssECI	CCNNGG	7 cut(s)	90, 324, 343, 411, 529, 1197, 1248
BssMI	GATC	7 cut(s)	206, 457, 1039, 1064, 1128, 1457, 1728
BssNI	GRCGYC	1 cut(s)	816
BssT1I	CCWWGG	3 cut(s)	324, 343, 411
Bst2UI	CCWGG	3 cut(s)	339, 530, 1249
Bst4CI	ACNGT	1 cut(s)	1616
Bst6I	CTCTTC	5 cut(s)	650, 789, 1074, 1083, 1660
BstACI	GRCGYC	1 cut(s)	816
BstAPI	GCANNNNNTGC	2 cut(s)	878, 1160
BstAUI	TGTACA	1 cut(s)	1616
BstC8I	GCNNGC	2 cut(s)	1194, 1276
BstDEI	CTNAG	6 cut(s)	309, 1329, 1495, 1546, 1661, 1773
BstDSI	CCRYGG	2 cut(s)	90, 324
BstEII	GGTNACC	1 cut(s)	524
BstF5I	GGATG	5 cut(s)	500, 741, 1276, 1385, 1705
BstFNI	CGCG	4 cut(s)	720, 1307, 1456, 1566
BstH2I	RGCGCY	1 cut(s)	263
BstHHI	GCGC	4 cut(s)	262, 722, 1456, 1568
BstKTI	GATC	7 cut(s)	209, 460, 1042, 1067, 1131, 1460, 1731
BstMAI	GTCTC	1 cut(s)	740
BstMBI	GATC	7 cut(s)	206, 457, 1039, 1064, 1128, 1457, 1728
BstNI	CCWGG	3 cut(s)	339, 530, 1249
BstNSI	RCATGY	2 cut(s)	193, 1342
BstPI	GGTNACC	1 cut(s)	524
BstSCI	CCNGG	3 cut(s)	337, 528, 1247
BstSLI	GKGCMC	1 cut(s)	1094
BstUI	CGCG	4 cut(s)	720, 1307, 1456, 1566
BstV1I	GCAGC	5 cut(s)	856, 1166, 1385, 1555, 1609
BstX2I	RGATCY	1 cut(s)	1064
BstYI	RGATCY	1 cut(s)	1064
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	6 cut(s)	73, 342, 348, 1202, 1590, 1655
BtgI	CCRYGG	2 cut(s)	90, 324
BtrI	CACGTC	1 cut(s)	335
BtsCI	GGATG	5 cut(s)	500, 741, 1276, 1385, 1705
BtsIMutI	CAGTG	3 cut(s)	115, 749, 1554
Cac8I	GCNNGC	2 cut(s)	1194, 1276
CaiI	CAGNNNCTG	1 cut(s)	1037
CciI	TCATGA	1 cut(s)	1425
CfoI	GCGC	4 cut(s)	262, 722, 1456, 1568
Cfr13I	GGNCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
CseI	GACGC	2 cut(s)	824, 1625
Csp6I	GTAC	2 cut(s)	297, 1617
CviAII	CATG	6 cut(s)	190, 325, 448, 1339, 1420, 1426
CviQI	GTAC	2 cut(s)	297, 1617
DdeI	CTNAG	6 cut(s)	309, 1329, 1495, 1546, 1661, 1773
DpnI	GATC	7 cut(s)	208, 459, 1041, 1066, 1130, 1459, 1730
DpnII	GATC	7 cut(s)	206, 457, 1039, 1064, 1128, 1457, 1728
DraIII	CACNNNGTG	1 cut(s)	137
EaeI	YGGCCR	2 cut(s)	71, 1588
Eam1104I	CTCTTC	5 cut(s)	650, 789, 1074, 1083, 1660
EarI	CTCTTC	5 cut(s)	650, 789, 1074, 1083, 1660
Eco130I	CCWWGG	3 cut(s)	324, 343, 411
Eco147I	AGGCCT	1 cut(s)	1202
Eco24I	GRGCYC	3 cut(s)	98, 955, 1330
Eco47I	GGWCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
Eco57I	CTGAAG	3 cut(s)	773, 1055, 1229
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	1 cut(s)	743
Eco91I	GGTNACC	1 cut(s)	524
EcoO109I	RGGNCCY	1 cut(s)	1534
EcoO65I	GGTNACC	1 cut(s)	524
EcoRII	CCWGG	3 cut(s)	337, 528, 1247
EcoT14I	CCWWGG	3 cut(s)	324, 343, 411
EcoT22I	ATGCAT	1 cut(s)	1366
EcoT38I	GRGCYC	3 cut(s)	98, 955, 1330
ErhI	CCWWGG	3 cut(s)	324, 343, 411
FaeI	CATG	6 cut(s)	193, 328, 451, 1342, 1423, 1429
FalI	AAGNNNNNCTT	2 cut(s)	70, 102
FaqI	GGGAC	1 cut(s)	1536
FatI	CATG	6 cut(s)	189, 324, 447, 1338, 1419, 1425
FauNDI	CATATG	1 cut(s)	1513
FbaI	TGATCA	4 cut(s)	457, 1039, 1128, 1728
Fnu4HI	GCNGC	8 cut(s)	34, 155, 819, 870, 1155, 1374, 1569, 1623
FokI	GGATG	5 cut(s)	487, 748, 1283, 1372, 1712
FriOI	GRGCYC	3 cut(s)	98, 955, 1330
Fsp4HI	GCNGC	8 cut(s)	34, 155, 819, 870, 1155, 1374, 1569, 1623
FspBI	CTAG	2 cut(s)	147, 1437
GlaI	GCGC	4 cut(s)	261, 721, 1455, 1567
GluI	GCNGC	8 cut(s)	34, 155, 819, 870, 1155, 1374, 1569, 1623
GsuI	CTGGAG	1 cut(s)	339
HaeII	RGCGCY	1 cut(s)	263
HaeIII	GGCC	6 cut(s)	73, 342, 348, 1202, 1590, 1655
HapII	CCGG	2 cut(s)	14, 504
HgaI	GACGC	2 cut(s)	824, 1625
HhaI	GCGC	4 cut(s)	262, 722, 1456, 1568
Hin1I	GRCGYC	1 cut(s)	816
Hin1II	CATG	6 cut(s)	193, 328, 451, 1342, 1423, 1429
Hin6I	GCGC	4 cut(s)	260, 720, 1454, 1566
HinP1I	GCGC	4 cut(s)	260, 720, 1454, 1566
HincII	GTYRAC	1 cut(s)	1336
HindII	GTYRAC	1 cut(s)	1336
HinfI	GANTC	7 cut(s)	8, 212, 376, 1166, 1353, 1397, 1491
HpaII	CCGG	2 cut(s)	14, 504
HphI	GGTGA	3 cut(s)	446, 452, 947
Hpy166II	GTNNAC	2 cut(s)	1092, 1336
Hpy188I	TCNGA	7 cut(s)	169, 211, 375, 930, 1083, 1498, 1774
Hpy8I	GTNNAC	2 cut(s)	1092, 1336
Hpy99I	CGWCG	1 cut(s)	1361
HpyAV	CCTTC	6 cut(s)	110, 144, 611, 1204, 1426, 1650
HpyCH4III	ACNGT	1 cut(s)	1616
HpyCH4IV	ACGT	4 cut(s)	334, 588, 1146, 1762
HpyF3I	CTNAG	6 cut(s)	309, 1329, 1495, 1546, 1661, 1773
HpySE526I	ACGT	4 cut(s)	334, 588, 1146, 1762
Hsp92I	GRCGYC	1 cut(s)	816
Hsp92II	CATG	6 cut(s)	193, 328, 451, 1342, 1423, 1429
HspAI	GCGC	4 cut(s)	260, 720, 1454, 1566
Ksp22I	TGATCA	4 cut(s)	457, 1039, 1128, 1728
Kzo9I	GATC	7 cut(s)	206, 457, 1039, 1064, 1128, 1457, 1728
LguI	GCTCTTC	2 cut(s)	1083, 1660
LmnI	GCTCC	9 cut(s)	60, 101, 170, 320, 356, 376, 670, 855, 1451
Lsp1109I	GCAGC	5 cut(s)	856, 1166, 1385, 1555, 1609
LweI	GCATC	6 cut(s)	185, 504, 1261, 1351, 1394, 1690
MaeI	CTAG	2 cut(s)	147, 1437
MaeII	ACGT	4 cut(s)	334, 588, 1146, 1762
MaeIII	GTNAC	7 cut(s)	140, 229, 251, 524, 533, 1301, 1318
MalI	GATC	7 cut(s)	208, 459, 1041, 1066, 1130, 1459, 1730
MboI	GATC	7 cut(s)	206, 457, 1039, 1064, 1128, 1457, 1728
MfeI	CAATTG	1 cut(s)	1605
MflI	RGATCY	1 cut(s)	1064
MhlI	GDGCHC	5 cut(s)	98, 667, 955, 1094, 1330
MlsI	TGGCCA	2 cut(s)	73, 1590
MluCI	AATT	4 cut(s)	822, 891, 903, 1605
MluNI	TGGCCA	2 cut(s)	73, 1590
MlyI	GAGTC	3 cut(s)	17, 385, 1391
Mox20I	TGGCCA	2 cut(s)	73, 1590
Mph1103I	ATGCAT	1 cut(s)	1366
MroXI	GAANNNNTTC	2 cut(s)	85, 924
MscI	TGGCCA	2 cut(s)	73, 1590
MseI	TTAA	4 cut(s)	390, 875, 1109, 1629
MslI	CAYNNNNRTG	1 cut(s)	1424
Msp20I	TGGCCA	2 cut(s)	73, 1590
MspA1I	CMGCKG	2 cut(s)	1157, 1622
MspI	CCGG	2 cut(s)	14, 504
MspR9I	CCNGG	3 cut(s)	339, 530, 1249
MunI	CAATTG	1 cut(s)	1605
Mva1269I	GAATGC	1 cut(s)	49
MvaI	CCWGG	3 cut(s)	339, 530, 1249
MvnI	CGCG	4 cut(s)	720, 1307, 1456, 1566
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	1 cut(s)	1513
NdeII	GATC	7 cut(s)	206, 457, 1039, 1064, 1128, 1457, 1728
NlaIII	CATG	6 cut(s)	193, 328, 451, 1342, 1423, 1429
NlaIV	GGNNCC	9 cut(s)	97, 166, 322, 372, 408, 741, 1223, 1254, 1536
NmeAIII	GCCGAG	1 cut(s)	1222
NmuCI	GTSAC	1 cut(s)	229
NsiI	ATGCAT	1 cut(s)	1366
NspI	RCATGY	2 cut(s)	193, 1342
PagI	TCATGA	1 cut(s)	1425
PceI	AGGCCT	1 cut(s)	1202
PciI	ACATGT	2 cut(s)	189, 1338
PciSI	GCTCTTC	2 cut(s)	1083, 1660
PcsI	WCGNNNNNNNCGW	1 cut(s)	1387
PctI	GAATGC	1 cut(s)	49
PdmI	GAANNNNTTC	2 cut(s)	85, 924
PfeI	GAWTC	4 cut(s)	212, 1166, 1353, 1491
PflMI	CCANNNNNTGG	1 cut(s)	1262
PkrI	GCNGC	8 cut(s)	35, 156, 820, 871, 1156, 1375, 1570, 1624
PleI	GAGTC	3 cut(s)	16, 384, 1391
PpsI	GAGTC	3 cut(s)	16, 384, 1391
PpuMI	RGGWCCY	1 cut(s)	1534
PscI	ACATGT	2 cut(s)	189, 1338
PsiI	TTATAA	1 cut(s)	1542
Psp1406I	AACGTT	1 cut(s)	1146
Psp5II	RGGWCCY	1 cut(s)	1534
Psp6I	CCWGG	3 cut(s)	337, 528, 1247
PspEI	GGTNACC	1 cut(s)	524
PspGI	CCWGG	3 cut(s)	337, 528, 1247
PspN4I	GGNNCC	9 cut(s)	97, 166, 322, 372, 408, 741, 1223, 1254, 1536
PspPI	GGNCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
PspPPI	RGGWCCY	1 cut(s)	1534
PstNI	CAGNNNCTG	1 cut(s)	1037
PsuI	RGATCY	1 cut(s)	1064
PvuII	CAGCTG	2 cut(s)	1157, 1622
RsaI	GTAC	2 cut(s)	298, 1618
RsaNI	GTAC	2 cut(s)	297, 1617
RseI	CAYNNNNRTG	1 cut(s)	1424
SapI	GCTCTTC	2 cut(s)	1083, 1660
SaqAI	TTAA	4 cut(s)	390, 875, 1109, 1629
SatI	GCNGC	8 cut(s)	34, 155, 819, 870, 1155, 1374, 1569, 1623
Sau3AI	GATC	7 cut(s)	206, 457, 1039, 1064, 1128, 1457, 1728
Sau96I	GGNCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
SchI	GAGTC	3 cut(s)	17, 385, 1391
ScrFI	CCNGG	3 cut(s)	339, 530, 1249
SduI	GDGCHC	5 cut(s)	98, 667, 955, 1094, 1330
SfaNI	GCATC	6 cut(s)	185, 504, 1261, 1351, 1394, 1690
SinI	GGWCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
SmiMI	CAYNNNNRTG	1 cut(s)	1424
SmlI	CTYRAG	4 cut(s)	538, 896, 1526, 1790
SmoI	CTYRAG	4 cut(s)	538, 896, 1526, 1790
Sse9I	AATT	4 cut(s)	822, 891, 903, 1605
SseBI	AGGCCT	1 cut(s)	1202
SsiI	CCGC	6 cut(s)	33, 154, 561, 819, 1564, 1780
SspMI	CTAG	2 cut(s)	147, 1437
StuI	AGGCCT	1 cut(s)	1202
StyD4I	CCNGG	3 cut(s)	337, 528, 1247
StyI	CCWWGG	3 cut(s)	324, 343, 411
TaaI	ACNGT	1 cut(s)	1616
TaiI	ACGT	4 cut(s)	337, 591, 1149, 1765
TaqI	TCGA	1 cut(s)	1356
TaqII	GACCGA	2 cut(s)	1280, 1566
TasI	AATT	4 cut(s)	822, 891, 903, 1605
TatI	WGTACW	1 cut(s)	1616
TauI	GCSGC	3 cut(s)	36, 157, 821
TfiI	GAWTC	4 cut(s)	212, 1166, 1353, 1491
Tru1I	TTAA	4 cut(s)	390, 875, 1109, 1629
Tru9I	TTAA	4 cut(s)	390, 875, 1109, 1629
TscAI	CASTG	3 cut(s)	115, 756, 1554
TseFI	GTSAC	1 cut(s)	229
TseI	GCWGC	5 cut(s)	869, 1154, 1373, 1568, 1622
Tsp45I	GTSAC	1 cut(s)	229
TspDTI	ATGAA	6 cut(s)	207, 489, 653, 699, 837, 1695
TspGWI	ACGGA	1 cut(s)	73
TspRI	CASTG	3 cut(s)	115, 756, 1554
Van91I	CCANNNNNTGG	1 cut(s)	1262
VneI	GTGCAC	1 cut(s)	1090
VpaK11BI	GGWCC	7 cut(s)	739, 1028, 1213, 1253, 1292, 1534, 1578
XapI	RAATTY	1 cut(s)	891
XbaI	TCTAGA	1 cut(s)	146
XceI	RCATGY	2 cut(s)	193, 1342
XmnI	GAANNNNTTC	2 cut(s)	85, 924
XspI	CTAG	2 cut(s)	147, 1437
Zsp2I	ATGCAT	1 cut(s)	1366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.