Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0014560

Physical Location & Seq

Genomic Coordinates Forward (+)

34967820 .. 34970890

Gene Structure 3071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1326400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGGAGAGTCGCCGGAGAAGAAATCAGGTTGCGGCATACTGAGTGCAGTTTTCGGGCGGAATAGTATCTGGCCCAGAAGAACAACTTCTACGGGTTCTCTTCCTGTAGCCAACAACAACAGTGCCACGTTAGTGAAAACACCAAGCACTCCTAATTCCAAACGGCGTCGCGGTGGCTCCGATGAGGCTGCCTTCCTTGATTCATCTAGCAACGTATCATCAGATTCATCCAAACCGGTCACGAAGCCTTCCCAATATAGTAATAGGGCACCCCCTATACAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAGCGGCAGCAATATCAACAAAAAATGGTGCCAAGCCAAGGTTATGTGAACCAAGGCAAAAGGGTTCCAAAGGAGAAACTTGGCATATCCGGTGAGCTTGATAGCATGATTGCTGATCATCAAAAATCGAAAGGGAGCAGTTCCCTTGTAAGGGCTTCATCTAGCAATGTTATGCTTTTCGGAAATTTGGGTAATTTGAGACAACCTGGGGCCGGCGGTGGTAGAGGCGGCGGAGGAAATGCAAACCCGTATAATGTTCTTGATTATCTTCCAAAAACTGCTAGAGAGGAAGTCCCAATGCCAAGCCAGGTAAAAGTGGGGAAGACTAATACTGTTAGGGAAGAGAAAAGACAGGGTGAGCCGGAACCACCTGCTTCCTTATGTCGCGCATTGTCGACTAGAATGGACCCTGAAACATTGAAGATCATGGGAAATGAAGATTACAAGAATGGTAGATTTGCGGAAGCATTGGCGTTGTATGATGCTGCAATTTCTATTGACCCCAATAAGGCTTCTTATAGGAGCAACAAAAGTGCTGCTTTAACCGCTCTAGGTAGAATTCTTGACGCAGTTTTTGAGTGCAGAGAGGCCATTCGGATTGAACCCCACTATCATAGGGCTCATCATCGTCTGGCAACATTATATCTTAGATTAGGGGAAGCAGAAAAAGCTTTGTATCACTACAAGCATGCTGGACCAGAGGCTGATCAAGAGGACATTGCTAAAGTAAAATCTCTTCAGGCTCGTCTGAACATGTGCACTGAGGCTCGTAGGTTAAGAGATTGGAACACCCTCATAAAGGAATCTCAAAGCACTATATTAGCGGGTGCAGATTCAGCGCCACAGATATATGCTTTGCAAGCGGAGGCCTTGTTGAAGCTCAATAGGCACCAGGAAGCAGATGAAGCATTATCCAGCGGTCCAAATTTTGAGGTTGATGCCTGCACTAAATTCTTAGGTCCTATTGGTAACGCGAATTTGTTAGCAACACGAGCTCAGGTGGACATGGTTGCTGGCAGATTGGATGATGCATTAAAGGCAGCTCAACAAGCATCACGGCTTGACTCAAACAACAGGGAAGCAAACATGGTTATGAGGAAGGCTCGAGTTGTTGTAGTAGCTCGATCAAAAGGCAACGAGCTTTTCAAGACAGCAAGGTTCTCCGAGGCATCTGTTGCATATGGGGAGGGACTTGAGCACGATCCTTATAACTCGGTGTTATTATGCAACCGTGCTGCTTGTCGTTCAAAACTTGGCCAATTAGATAAAGCAATCGAGGACTGTACAGCTGCCCTTAATGTGCGCCCATCTTACAACAAGGCTAGATTAAGAAGAGCAGATTGCAATGCCAAGTTGGAAAAATGGGAAGCTTCAATAGAAGACTATGAGATTTTGATAAAGGAAACACCAGAGGATGAGGAGGTAACCCGTGCTTTGTCTGAAGTGCGGGCGCAGCTCAGAAAACAGCGAGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_2 TPR_7 TPR_8 Thioredoxin

Protein Analysis

604

Amino Acids

66.46

Weight (kDa)

9.33

Isoelectric Point (pI)

55.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_11	PF13414	256 - 293	5.3e-06	TPR repeat
TPR_19	PF14559	294 - 362	2.4e-06	Tetratricopeptide repeat
TPR_1	PF00515	519 - 550	2.5e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10090 AT5G65160
fragaria_vesca	FvH4_1g21140
malus_domestica	MD01G1027500.v1.1 MD15G1326400.v1.1
prunus_persica	Prupe.6G182700_v2.0.a1 Prupe.6G182700_v2.0.a1
pyrus_communis	pycom15g28750
rosa_chinensis	RchiOBHm_Chr2g0114921
rosa_laevigata	RLG00000018135
rosa_roxburghii	Rroxscaffold_2G00130450
rosa_rugosa	Rorug02G0191800
rosa_samantha	Rh2AG250600 Rh2BG260000 Rh2CG254800 Rh2DG258700
rosa_wichuraiana	Rw2G019530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1545
AarI	CACCTGC	1 cut(s)	715
Acc36I	ACCTGC	1 cut(s)	715
AccB1I	GGYRCC	3 cut(s)	268, 364, 1224
AccBSI	CCGCTC	1 cut(s)	884
AccI	GTMKAC	1 cut(s)	731
AccII	CGCG	3 cut(s)	171, 723, 1310
AclWI	GGATC	1 cut(s)	1532
AcoI	YGGCCR	1 cut(s)	1591
AcsI	RAATTY	5 cut(s)	520, 894, 1261, 1286, 1312
AcuI	CTGAAG	2 cut(s)	1058, 1797
AcyI	GRCGYC	1 cut(s)	166
AfaI	GTAC	1 cut(s)	1621
AfiI	CCNNNNNNNGG	6 cut(s)	374, 486, 487, 548, 844, 1135
AflIII	ACRYGT	1 cut(s)	1089
AgeI	ACCGGT	1 cut(s)	235
AgsI	TTSAA	6 cut(s)	757, 938, 1213, 1483, 1584, 1710
AjnI	CCWGG	3 cut(s)	541, 642, 1227
AleI	CACNNNNGTG	1 cut(s)	131
Alw21I	GWGCWC	3 cut(s)	1097, 1333, 1536
Alw26I	GTCTC	1 cut(s)	529
Alw44I	GTGCAC	1 cut(s)	1093
AlwI	GGATC	1 cut(s)	1532
AlwNI	CAGNNNCTG	1 cut(s)	1040
Ama87I	CYCGRG	1 cut(s)	1440
AoxI	GGCC	5 cut(s)	71, 546, 924, 1203, 1591
ApaLI	GTGCAC	1 cut(s)	1093
ApoI	RAATTY	5 cut(s)	520, 894, 1261, 1286, 1312
ArsI	GACNNNNNNTTYG	2 cut(s)	893, 925
AsiGI	ACCGGT	1 cut(s)	235
Asp700I	GAANNNNTTC	1 cut(s)	85
AspLEI	GCGC	4 cut(s)	725, 1177, 1641, 1789
AspS9I	GGNCC	6 cut(s)	72, 546, 742, 1031, 1256, 1295
AsuHPI	GGTGA	2 cut(s)	440, 704
AvaI	CYCGRG	1 cut(s)	1440
AvaII	GGWCC	4 cut(s)	742, 1031, 1256, 1295
BaeGI	GKGCMC	2 cut(s)	271, 1097
BalI	TGGCCA	1 cut(s)	1593
BanI	GGYRCC	3 cut(s)	268, 364, 1224
BanII	GRGCYC	2 cut(s)	958, 1333
BarI	GAAGNNNNNNTAC	2 cut(s)	1056, 1088
BauI	CACGAG	1 cut(s)	1326
BbsI	GAAGAC	2 cut(s)	665, 1722
Bbv12I	GWGCWC	3 cut(s)	1097, 1333, 1536
BccI	CCATC	1 cut(s)	1651
BceAI	ACGGC	2 cut(s)	179, 1409
BcgI	CGANNNNNNTGC	2 cut(s)	170, 204
BciT130I	CCWGG	3 cut(s)	543, 644, 1229
BclI	TGATCA	2 cut(s)	451, 1042
BcoDI	GTCTC	1 cut(s)	529
BfaI	CTAG	7 cut(s)	207, 498, 618, 735, 887, 1659, 1810
BfmI	CTRYAG	1 cut(s)	105
BfoI	RGCGCY	1 cut(s)	1178
BfuAI	ACCTGC	1 cut(s)	715
Bme1390I	CCNGG	3 cut(s)	543, 644, 1229
Bme18I	GGWCC	4 cut(s)	742, 1031, 1256, 1295
BmeT110I	CYCGRG	1 cut(s)	1440
BmgT120I	GGNCC	6 cut(s)	72, 546, 742, 1031, 1256, 1295
BmiI	GGNNCC	8 cut(s)	178, 270, 366, 402, 547, 702, 744, 1226
BmrFI	CCNGG	3 cut(s)	543, 644, 1229
BmsI	GCATC	5 cut(s)	808, 1264, 1354, 1397, 1514
BpiI	GAAGAC	2 cut(s)	665, 1722
BplI	GAGNNNNNCTC	2 cut(s)	1423, 1455
Bpu10I	CCTNAGC	1 cut(s)	1332
BpuEI	CTTGAG	1 cut(s)	1550
BsaHI	GRCGYC	1 cut(s)	166
BsaJI	CCNNGG	4 cut(s)	373, 388, 542, 1500
BsaWI	WCCGGW	2 cut(s)	235, 425
BsaXI	ACNNNNNCTCC	2 cut(s)	1193, 1223
Bsc4I	CCNNNNNNNGG	6 cut(s)	374, 486, 487, 548, 844, 1135
Bse118I	RCCGGY	2 cut(s)	235, 548
Bse3DI	GCAATG	3 cut(s)	508, 1053, 1687
BseBI	CCWGG	3 cut(s)	543, 644, 1229
BseDI	CCNNGG	4 cut(s)	373, 388, 542, 1500
BseGI	GGATG	3 cut(s)	227, 1366, 1756
BseLI	CCNNNNNNNGG	6 cut(s)	374, 486, 487, 548, 844, 1135
BseMI	GCAATG	3 cut(s)	508, 1053, 1687
BseMII	CTCAG	4 cut(s)	32, 1089, 1346, 1807
BseRI	GAGGAG	1 cut(s)	1769
BseSI	GKGCMC	2 cut(s)	271, 1097
BsgI	GTGCAG	4 cut(s)	66, 937, 1185, 1264
Bsh1236I	CGCG	3 cut(s)	171, 723, 1310
BshFI	GGCC	5 cut(s)	73, 548, 926, 1205, 1593
BshNI	GGYRCC	3 cut(s)	268, 364, 1224
BshTI	ACCGGT	1 cut(s)	235
BsiHKAI	GWGCWC	3 cut(s)	1097, 1333, 1536
BsiHKCI	CYCGRG	1 cut(s)	1440
BsiSI	CCGG	5 cut(s)	14, 236, 426, 549, 698
BslFI	GGGAC	2 cut(s)	614, 1539
BslI	CCNNNNNNNGG	6 cut(s)	374, 486, 487, 548, 844, 1135
BsmAI	GTCTC	1 cut(s)	529
BsmFI	GGGAC	2 cut(s)	614, 1539
BsnI	GGCC	5 cut(s)	73, 548, 926, 1205, 1593
BsoBI	CYCGRG	1 cut(s)	1440
Bsp1286I	GDGCHC	5 cut(s)	271, 958, 1097, 1333, 1536
Bsp1407I	TGTACA	1 cut(s)	1619
Bsp143I	GATC	5 cut(s)	451, 759, 1042, 1460, 1537
BspANI	GGCC	5 cut(s)	73, 548, 926, 1205, 1593
BspCNI	CTCAG	4 cut(s)	33, 1090, 1345, 1806
BspFNI	CGCG	3 cut(s)	171, 723, 1310
BspLI	GGNNCC	8 cut(s)	178, 270, 366, 402, 547, 702, 744, 1226
BspMI	ACCTGC	1 cut(s)	715
BspPI	GGATC	1 cut(s)	1532
BspQI	GCTCTTC	1 cut(s)	1663
BspT107I	GGYRCC	3 cut(s)	268, 364, 1224
BsrBI	CCGCTC	1 cut(s)	884
BsrDI	GCAATG	3 cut(s)	508, 1053, 1687
BsrFI	RCCGGY	2 cut(s)	235, 548
BsrGI	TGTACA	1 cut(s)	1619
BssAI	RCCGGY	2 cut(s)	235, 548
BssECI	CCNNGG	4 cut(s)	373, 388, 542, 1500
BssMI	GATC	5 cut(s)	451, 759, 1042, 1460, 1537
BssNI	GRCGYC	1 cut(s)	166
BssSI	CACGAG	1 cut(s)	1326
BssT1I	CCWWGG	2 cut(s)	373, 388
Bst2BI	CACGAG	1 cut(s)	1326
Bst2UI	CCWGG	3 cut(s)	543, 644, 1229
Bst4CI	ACNGT	4 cut(s)	122, 670, 1568, 1619
Bst6I	CTCTTC	4 cut(s)	105, 672, 1077, 1663
BstACI	GRCGYC	1 cut(s)	166
BstAPI	GCANNNNNTGC	1 cut(s)	1511
BstAUI	TGTACA	1 cut(s)	1619
BstC8I	GCNNGC	6 cut(s)	550, 1026, 1197, 1279, 1351, 1785
BstDEI	CTNAG	6 cut(s)	41, 983, 1098, 1291, 1332, 1793
BstEII	GGTNACC	1 cut(s)	1759
BstENI	CCTNNNNNAGG	1 cut(s)	1133
BstF5I	GGATG	3 cut(s)	227, 1366, 1756
BstFNI	CGCG	3 cut(s)	171, 723, 1310
BstH2I	RGCGCY	1 cut(s)	1178
BstHHI	GCGC	4 cut(s)	725, 1177, 1641, 1789
BstKTI	GATC	5 cut(s)	454, 762, 1045, 1463, 1540
BstMAI	GTCTC	1 cut(s)	529
BstMBI	GATC	5 cut(s)	451, 759, 1042, 1460, 1537
BstNI	CCWGG	3 cut(s)	543, 644, 1229
BstNSI	RCATGY	2 cut(s)	1028, 1093
BstPI	GGTNACC	1 cut(s)	1759
BstSCI	CCNGG	3 cut(s)	541, 642, 1227
BstSFI	CTRYAG	1 cut(s)	105
BstSLI	GKGCMC	2 cut(s)	271, 1097
BstUI	CGCG	3 cut(s)	171, 723, 1310
BstV2I	GAAGAC	2 cut(s)	665, 1722
BsuRI	GGCC	5 cut(s)	73, 548, 926, 1205, 1593
BtsCI	GGATG	3 cut(s)	227, 1366, 1756
BtsIMutI	CAGTG	2 cut(s)	127, 1095
BveI	ACCTGC	1 cut(s)	715
Cac8I	GCNNGC	6 cut(s)	550, 1026, 1197, 1279, 1351, 1785
CaiI	CAGNNNCTG	1 cut(s)	1040
CfoI	GCGC	4 cut(s)	725, 1177, 1641, 1789
Cfr10I	RCCGGY	2 cut(s)	235, 548
Cfr13I	GGNCC	6 cut(s)	72, 546, 742, 1031, 1256, 1295
CseI	GACGC	2 cut(s)	155, 911
Csp6I	GTAC	1 cut(s)	1620
CspAI	ACCGGT	1 cut(s)	235
CviAII	CATG	6 cut(s)	442, 763, 1025, 1090, 1342, 1423
CviQI	GTAC	1 cut(s)	1620
DdeI	CTNAG	6 cut(s)	41, 983, 1098, 1291, 1332, 1793
DpnI	GATC	5 cut(s)	453, 761, 1044, 1462, 1539
DpnII	GATC	5 cut(s)	451, 759, 1042, 1460, 1537
EaeI	YGGCCR	1 cut(s)	1591
Eam1104I	CTCTTC	4 cut(s)	105, 672, 1077, 1663
EarI	CTCTTC	4 cut(s)	105, 672, 1077, 1663
EciI	GGCGGA	2 cut(s)	73, 582
Ecl136II	GAGCTC	1 cut(s)	1331
Eco130I	CCWWGG	2 cut(s)	373, 388
Eco147I	AGGCCT	1 cut(s)	1205
Eco24I	GRGCYC	2 cut(s)	958, 1333
Eco47I	GGWCC	4 cut(s)	742, 1031, 1256, 1295
Eco53kI	GAGCTC	1 cut(s)	1331
Eco57I	CTGAAG	2 cut(s)	1058, 1797
Eco88I	CYCGRG	1 cut(s)	1440
Eco91I	GGTNACC	1 cut(s)	1759
EcoICRI	GAGCTC	1 cut(s)	1331
EcoNI	CCTNNNNNAGG	1 cut(s)	1133
EcoO109I	RGGNCCY	1 cut(s)	1295
EcoO65I	GGTNACC	1 cut(s)	1759
EcoRI	GAATTC	1 cut(s)	894
EcoRII	CCWGG	3 cut(s)	541, 642, 1227
EcoT14I	CCWWGG	2 cut(s)	373, 388
EcoT22I	ATGCAT	1 cut(s)	1369
EcoT38I	GRGCYC	2 cut(s)	958, 1333
ErhI	CCWWGG	2 cut(s)	373, 388
FaeI	CATG	6 cut(s)	445, 766, 1028, 1093, 1345, 1426
FalI	AAGNNNNNCTT	4 cut(s)	70, 102, 859, 891
FaqI	GGGAC	2 cut(s)	614, 1539
FatI	CATG	6 cut(s)	441, 762, 1024, 1089, 1341, 1422
FauI	CCCGC	2 cut(s)	1153, 1776
FauNDI	CATATG	1 cut(s)	1516
FbaI	TGATCA	2 cut(s)	451, 1042
FblI	GTMKAC	1 cut(s)	731
FokI	GGATG	3 cut(s)	214, 1373, 1763
FriOI	GRGCYC	2 cut(s)	958, 1333
FspBI	CTAG	7 cut(s)	207, 498, 618, 735, 887, 1659, 1810
GlaI	GCGC	4 cut(s)	724, 1176, 1640, 1788
HaeII	RGCGCY	1 cut(s)	1178
HaeIII	GGCC	5 cut(s)	73, 548, 926, 1205, 1593
HapII	CCGG	5 cut(s)	14, 236, 426, 549, 698
HgaI	GACGC	2 cut(s)	155, 911
HhaI	GCGC	4 cut(s)	725, 1177, 1641, 1789
Hin1I	GRCGYC	1 cut(s)	166
Hin1II	CATG	6 cut(s)	445, 766, 1028, 1093, 1345, 1426
Hin6I	GCGC	4 cut(s)	723, 1175, 1639, 1787
HinP1I	GCGC	4 cut(s)	723, 1175, 1639, 1787
HincII	GTYRAC	1 cut(s)	732
HindII	GTYRAC	1 cut(s)	732
HindIII	AAGCTT	2 cut(s)	1005, 1704
HinfI	GANTC	6 cut(s)	8, 200, 224, 1139, 1169, 1400
HpaII	CCGG	5 cut(s)	14, 236, 426, 549, 698
HphI	GGTGA	2 cut(s)	440, 704
Hpy166II	GTNNAC	4 cut(s)	385, 732, 1095, 1339
Hpy188I	TCNGA	8 cut(s)	181, 223, 518, 933, 1086, 1501, 1777, 1796
Hpy188III	TCNNGA	5 cut(s)	241, 596, 899, 1046, 1483
Hpy8I	GTNNAC	4 cut(s)	385, 732, 1095, 1339
Hpy99I	CGWCG	1 cut(s)	171
HpyAV	CCTTC	3 cut(s)	202, 258, 1429
HpyCH4III	ACNGT	4 cut(s)	122, 670, 1568, 1619
HpyCH4IV	ACGT	2 cut(s)	128, 213
HpyF3I	CTNAG	6 cut(s)	41, 983, 1098, 1291, 1332, 1793
HpySE526I	ACGT	2 cut(s)	128, 213
Hsp92I	GRCGYC	1 cut(s)	166
Hsp92II	CATG	6 cut(s)	445, 766, 1028, 1093, 1345, 1426
HspAI	GCGC	4 cut(s)	723, 1175, 1639, 1787
KroI	GCCGGC	1 cut(s)	548
KroNI	GCCGGC	1 cut(s)	550
Ksp22I	TGATCA	2 cut(s)	451, 1042
Kzo9I	GATC	5 cut(s)	451, 759, 1042, 1460, 1537
LguI	GCTCTTC	1 cut(s)	1663
LmnI	GCTCC	3 cut(s)	182, 471, 858
LweI	GCATC	5 cut(s)	808, 1264, 1354, 1397, 1514
MaeI	CTAG	7 cut(s)	207, 498, 618, 735, 887, 1659, 1810
MaeII	ACGT	2 cut(s)	128, 213
MaeIII	GTNAC	3 cut(s)	238, 1304, 1759
MalI	GATC	5 cut(s)	453, 761, 1044, 1462, 1539
MbiI	CCGCTC	1 cut(s)	884
MboI	GATC	5 cut(s)	451, 759, 1042, 1460, 1537
MhlI	GDGCHC	5 cut(s)	271, 958, 1097, 1333, 1536
MlsI	TGGCCA	1 cut(s)	1593
MluCI	AATT	9 cut(s)	154, 520, 529, 825, 894, 1261, 1286, 1312, 1595
MluNI	TGGCCA	1 cut(s)	1593
MlyI	GAGTC	2 cut(s)	17, 1394
MmeI	TCCRAC	1 cut(s)	1671
Mox20I	TGGCCA	1 cut(s)	1593
Mph1103I	ATGCAT	1 cut(s)	1369
MroNI	GCCGGC	1 cut(s)	548
MroXI	GAANNNNTTC	1 cut(s)	85
MscI	TGGCCA	1 cut(s)	1593
MseI	TTAA	5 cut(s)	878, 1112, 1370, 1632, 1664
MslI	CAYNNNNRTG	2 cut(s)	131, 1427
Msp20I	TGGCCA	1 cut(s)	1593
MspA1I	CMGCKG	3 cut(s)	340, 1254, 1625
MspI	CCGG	5 cut(s)	14, 236, 426, 549, 698
MspR9I	CCNGG	3 cut(s)	543, 644, 1229
MvaI	CCWGG	3 cut(s)	543, 644, 1229
MvnI	CGCG	3 cut(s)	171, 723, 1310
NaeI	GCCGGC	1 cut(s)	550
NdeI	CATATG	1 cut(s)	1516
NdeII	GATC	5 cut(s)	451, 759, 1042, 1460, 1537
NgoMIV	GCCGGC	1 cut(s)	548
NlaIII	CATG	6 cut(s)	445, 766, 1028, 1093, 1345, 1426
NlaIV	GGNNCC	8 cut(s)	178, 270, 366, 402, 547, 702, 744, 1226
NmuCI	GTSAC	1 cut(s)	238
NsiI	ATGCAT	1 cut(s)	1369
NspI	RCATGY	2 cut(s)	1028, 1093
OliI	CACNNNNGTG	1 cut(s)	131
PaeI	GCATGC	1 cut(s)	1028
PaeR7I	CTCGAG	1 cut(s)	1440
PaqCI	CACCTGC	1 cut(s)	715
PceI	AGGCCT	1 cut(s)	1205
PciI	ACATGT	1 cut(s)	1089
PciSI	GCTCTTC	1 cut(s)	1663
PdiI	GCCGGC	1 cut(s)	550
PdmI	GAANNNNTTC	1 cut(s)	85
PfeI	GAWTC	4 cut(s)	200, 224, 1139, 1169
PinAI	ACCGGT	1 cut(s)	235
PleI	GAGTC	2 cut(s)	16, 1394
PpsI	GAGTC	2 cut(s)	16, 1394
PpuMI	RGGWCCY	1 cut(s)	1295
PscI	ACATGT	1 cut(s)	1089
PsiI	TTATAA	1 cut(s)	1545
Psp124BI	GAGCTC	1 cut(s)	1333
Psp5II	RGGWCCY	1 cut(s)	1295
Psp6I	CCWGG	3 cut(s)	541, 642, 1227
PspEI	GGTNACC	1 cut(s)	1759
PspGI	CCWGG	3 cut(s)	541, 642, 1227
PspN4I	GGNNCC	8 cut(s)	178, 270, 366, 402, 547, 702, 744, 1226
PspPI	GGNCC	6 cut(s)	72, 546, 742, 1031, 1256, 1295
PspPPI	RGGWCCY	1 cut(s)	1295
PspXI	VCTCGAGB	1 cut(s)	1440
PsrI	GAACNNNNNNTAC	2 cut(s)	73, 105
PstNI	CAGNNNCTG	1 cut(s)	1040
PvuII	CAGCTG	1 cut(s)	1625
RsaI	GTAC	1 cut(s)	1621
RsaNI	GTAC	1 cut(s)	1620
RseI	CAYNNNNRTG	2 cut(s)	131, 1427
SacI	GAGCTC	1 cut(s)	1333
SalI	GTCGAC	1 cut(s)	730
SapI	GCTCTTC	1 cut(s)	1663
SaqAI	TTAA	5 cut(s)	878, 1112, 1370, 1632, 1664
Sau3AI	GATC	5 cut(s)	451, 759, 1042, 1460, 1537
Sau96I	GGNCC	6 cut(s)	72, 546, 742, 1031, 1256, 1295
SchI	GAGTC	2 cut(s)	17, 1394
ScrFI	CCNGG	3 cut(s)	543, 644, 1229
SduI	GDGCHC	5 cut(s)	271, 958, 1097, 1333, 1536
SfaNI	GCATC	5 cut(s)	808, 1264, 1354, 1397, 1514
SfcI	CTRYAG	1 cut(s)	105
Sfr274I	CTCGAG	1 cut(s)	1440
SinI	GGWCC	4 cut(s)	742, 1031, 1256, 1295
SlaI	CTCGAG	1 cut(s)	1440
SmiMI	CAYNNNNRTG	2 cut(s)	131, 1427
SmlI	CTYRAG	2 cut(s)	1440, 1529
SmoI	CTYRAG	2 cut(s)	1440, 1529
SphI	GCATGC	1 cut(s)	1028
Sse9I	AATT	9 cut(s)	154, 520, 529, 825, 894, 1261, 1286, 1312, 1595
SseBI	AGGCCT	1 cut(s)	1205
SspMI	CTAG	7 cut(s)	207, 498, 618, 735, 887, 1659, 1810
SstI	GAGCTC	1 cut(s)	1333
StuI	AGGCCT	1 cut(s)	1205
StyD4I	CCNGG	3 cut(s)	541, 642, 1227
StyI	CCWWGG	2 cut(s)	373, 388
TaaI	ACNGT	4 cut(s)	122, 670, 1568, 1619
TaiI	ACGT	2 cut(s)	131, 216
TaqI	TCGA	5 cut(s)	464, 731, 1441, 1459, 1611
TasI	AATT	9 cut(s)	154, 520, 529, 825, 894, 1261, 1286, 1312, 1595
TatI	WGTACW	1 cut(s)	1619
TauI	GCSGC	3 cut(s)	36, 343, 567
TfiI	GAWTC	4 cut(s)	200, 224, 1139, 1169
Tru1I	TTAA	5 cut(s)	878, 1112, 1370, 1632, 1664
Tru9I	TTAA	5 cut(s)	878, 1112, 1370, 1632, 1664
TscAI	CASTG	2 cut(s)	127, 1102
TseFI	GTSAC	1 cut(s)	238
Tsp45I	GTSAC	1 cut(s)	238
TspDTI	ATGAA	5 cut(s)	192, 216, 483, 786, 1254
TspRI	CASTG	2 cut(s)	127, 1102
VneI	GTGCAC	1 cut(s)	1093
VpaK11BI	GGWCC	4 cut(s)	742, 1031, 1256, 1295
XagI	CCTNNNNNAGG	1 cut(s)	1133
XapI	RAATTY	5 cut(s)	520, 894, 1261, 1286, 1312
XceI	RCATGY	2 cut(s)	1028, 1093
XhoI	CTCGAG	1 cut(s)	1440
XmiI	GTMKAC	1 cut(s)	731
XmnI	GAANNNNTTC	1 cut(s)	85
XspI	CTAG	7 cut(s)	207, 498, 618, 735, 887, 1659, 1810
Zsp2I	ATGCAT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.