No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22122 AT4G39675 |
| fragaria_vesca | FvH4_1g21780 |
| prunus_persica | Prupe.6G177800_v2.0.a1 Prupe.6G177900_v2.0.a1 Prupe.6G178000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0115661 RchiOBHm_Chr7g0216891 |
| rosa_roxburghii | Rroxscaffold_2G00128860 Rroxscaffold_2G00128870 Rroxscaffold_2G00128880 |
| rosa_rugosa | Rorug02G0199100 Rorug02G0199200 |
| rosa_samantha | Rh2AG256400 Rh2BG267000 Rh2CG261800 Rh2CG261900 Rh2DG264700 Rh2DG264800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 151 |
| AcsI | RAATTY | 1 cut(s) | 178 |
| AgeI | ACCGGT | 1 cut(s) | 200 |
| AjnI | CCWGG | 1 cut(s) | 92 |
| AluBI | AGCT | 1 cut(s) | 21 |
| AluI | AGCT | 1 cut(s) | 21 |
| AoxI | GGCC | 1 cut(s) | 151 |
| ApoI | RAATTY | 1 cut(s) | 178 |
| AsiGI | ACCGGT | 1 cut(s) | 200 |
| AspS9I | GGNCC | 2 cut(s) | 166, 203 |
| AsuC2I | CCSGG | 1 cut(s) | 174 |
| AvaII | GGWCC | 2 cut(s) | 166, 203 |
| BccI | CCATC | 2 cut(s) | 98, 177 |
| BciT130I | CCWGG | 1 cut(s) | 94 |
| BclI | TGATCA | 1 cut(s) | 124 |
| BcnI | CCSGG | 1 cut(s) | 174 |
| Bme1390I | CCNGG | 2 cut(s) | 94, 174 |
| Bme18I | GGWCC | 2 cut(s) | 166, 203 |
| BmgT120I | GGNCC | 2 cut(s) | 166, 203 |
| BmrFI | CCNGG | 2 cut(s) | 94, 174 |
| BpmI | CTGGAG | 1 cut(s) | 86 |
| BpuMI | CCSGG | 1 cut(s) | 174 |
| BsaJI | CCNNGG | 1 cut(s) | 10 |
| BsaWI | WCCGGW | 1 cut(s) | 200 |
| Bse118I | RCCGGY | 1 cut(s) | 200 |
| Bse1I | ACTGG | 1 cut(s) | 69 |
| BseBI | CCWGG | 1 cut(s) | 94 |
| BseDI | CCNNGG | 1 cut(s) | 10 |
| BseGI | GGATG | 1 cut(s) | 169 |
| BseNI | ACTGG | 1 cut(s) | 69 |
| BseRI | GAGGAG | 2 cut(s) | 98, 114 |
| BshFI | GGCC | 1 cut(s) | 153 |
| BshTI | ACCGGT | 1 cut(s) | 200 |
| BsiSI | CCGG | 5 cut(s) | 154, 173, 185, 201, 206 |
| BsnI | GGCC | 1 cut(s) | 153 |
| Bsp143I | GATC | 1 cut(s) | 124 |
| BspANI | GGCC | 1 cut(s) | 153 |
| BsrFI | RCCGGY | 1 cut(s) | 200 |
| BsrI | ACTGG | 1 cut(s) | 69 |
| BssAI | RCCGGY | 1 cut(s) | 200 |
| BssECI | CCNNGG | 1 cut(s) | 10 |
| BssMI | GATC | 1 cut(s) | 124 |
| BssT1I | CCWWGG | 1 cut(s) | 10 |
| Bst2UI | CCWGG | 1 cut(s) | 94 |
| Bst4CI | ACNGT | 1 cut(s) | 113 |
| Bst6I | CTCTTC | 1 cut(s) | 41 |
| BstC8I | GCNNGC | 1 cut(s) | 19 |
| BstF5I | GGATG | 1 cut(s) | 169 |
| BstKTI | GATC | 1 cut(s) | 127 |
| BstMBI | GATC | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 23, 49 |
| BstNI | CCWGG | 1 cut(s) | 94 |
| BstSCI | CCNGG | 2 cut(s) | 92, 172 |
| BsuRI | GGCC | 1 cut(s) | 153 |
| BtsCI | GGATG | 1 cut(s) | 169 |
| Cac8I | GCNNGC | 1 cut(s) | 19 |
| Cfr10I | RCCGGY | 1 cut(s) | 200 |
| Cfr13I | GGNCC | 2 cut(s) | 166, 203 |
| CpoI | CGGWCCG | 1 cut(s) | 203 |
| CspAI | ACCGGT | 1 cut(s) | 200 |
| CspI | CGGWCCG | 1 cut(s) | 203 |
| CviAII | CATG | 1 cut(s) | 40 |
| CviJI | RGCY | 5 cut(s) | 21, 92, 140, 153, 188 |
| CviKI_1 | RGCY | 5 cut(s) | 21, 92, 140, 153, 188 |
| DpnI | GATC | 1 cut(s) | 126 |
| DpnII | GATC | 1 cut(s) | 124 |
| EaeI | YGGCCR | 1 cut(s) | 151 |
| Eam1104I | CTCTTC | 1 cut(s) | 41 |
| EarI | CTCTTC | 1 cut(s) | 41 |
| Eco130I | CCWWGG | 1 cut(s) | 10 |
| Eco47I | GGWCC | 2 cut(s) | 166, 203 |
| EcoRII | CCWGG | 1 cut(s) | 92 |
| EcoT14I | CCWWGG | 1 cut(s) | 10 |
| ErhI | CCWWGG | 1 cut(s) | 10 |
| FaeI | CATG | 1 cut(s) | 43 |
| FaiI | YATR | 4 cut(s) | 24, 36, 41, 150 |
| FatI | CATG | 1 cut(s) | 39 |
| FbaI | TGATCA | 1 cut(s) | 124 |
| FokI | GGATG | 1 cut(s) | 156 |
| GsuI | CTGGAG | 1 cut(s) | 86 |
| HaeIII | GGCC | 1 cut(s) | 153 |
| HapII | CCGG | 5 cut(s) | 154, 173, 185, 201, 206 |
| Hin1II | CATG | 1 cut(s) | 43 |
| HpaII | CCGG | 5 cut(s) | 154, 173, 185, 201, 206 |
| Hpy188I | TCNGA | 1 cut(s) | 193 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| HpyAV | CCTTC | 2 cut(s) | 49, 157 |
| HpyCH4III | ACNGT | 1 cut(s) | 113 |
| HpyCH4V | TGCA | 1 cut(s) | 43 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 23, 49 |
| Hsp92II | CATG | 1 cut(s) | 43 |
| Ksp22I | TGATCA | 1 cut(s) | 124 |
| Kzo9I | GATC | 1 cut(s) | 124 |
| LpnPI | CCDG | 9 cut(s) | 12, 50, 79, 106, 167, 186, 198, 214, 219 |
| MalI | GATC | 1 cut(s) | 126 |
| MboI | GATC | 1 cut(s) | 124 |
| MboII | GAAGA | 2 cut(s) | 58, 85 |
| MluCI | AATT | 1 cut(s) | 178 |
| MnlI | CCTC | 4 cut(s) | 42, 63, 76, 92 |
| MspI | CCGG | 5 cut(s) | 154, 173, 185, 201, 206 |
| MspR9I | CCNGG | 2 cut(s) | 94, 174 |
| MvaI | CCWGG | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 23, 49 |
| NciI | CCSGG | 1 cut(s) | 174 |
| NdeII | GATC | 1 cut(s) | 124 |
| NlaIII | CATG | 1 cut(s) | 43 |
| PfoI | TCCNGGA | 1 cut(s) | 172 |
| PinAI | ACCGGT | 1 cut(s) | 200 |
| Psp6I | CCWGG | 1 cut(s) | 92 |
| PspGI | CCWGG | 1 cut(s) | 92 |
| PspPI | GGNCC | 2 cut(s) | 166, 203 |
| Rsr2I | CGGWCCG | 1 cut(s) | 203 |
| RsrII | CGGWCCG | 1 cut(s) | 203 |
| Sau3AI | GATC | 1 cut(s) | 124 |
| Sau96I | GGNCC | 2 cut(s) | 166, 203 |
| ScrFI | CCNGG | 2 cut(s) | 94, 174 |
| SetI | ASST | 2 cut(s) | 23, 168 |
| SinI | GGWCC | 2 cut(s) | 166, 203 |
| Sse9I | AATT | 1 cut(s) | 178 |
| StyD4I | CCNGG | 2 cut(s) | 92, 172 |
| StyI | CCWWGG | 1 cut(s) | 10 |
| TaaI | ACNGT | 1 cut(s) | 113 |
| TasI | AATT | 1 cut(s) | 178 |
| VpaK11BI | GGWCC | 2 cut(s) | 166, 203 |
| XapI | RAATTY | 1 cut(s) | 178 |