Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0012237

Physical Location & Seq

Genomic Coordinates Forward (+)

15079189 .. 15082610

Gene Structure 3422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g23230.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGAGATGCAATAAAACACTGATCAAAACGACGTCGAAGATAGCAGCCCTCGCAAGAATGGGTCACATAAAACACGCACGCCAACTGTTCGACGAAATGCCTCACAGAGACTCCATTGCTTGGAACGCAATGCTCACCAACTATACCCATCTGGGTCTTCACCACCAAGCTCTCTCTTTTCTTCGCCGCATGAGAATCTCCAATGCCACCCCTGATCACTTCACCTTCACCGCCGTGTTAAGAGCCTGCGCCGCGGCAAGTAGCCTTAAATGTGGAGCCACTTTGCATGGTTTAGTCACTGTTTTGGGTTACCAGTCTTACTTGCCGGTTAACAATGCGCTTGTTGATATGTATGGGAAATGCTTGGACCCTTGTAGTGCTAATAGAGTGTTTGAGGAGATGAGACTTAGGAATGAAGTAACTTGGTGTTCTTTGTTGTTTGCATACACAAACTCGGGACTGTTTGACGCGGCTCGTGAGGTGTTTTGTGTAATGCCTAGGAGGGTGGAGATAGCTTGGAATGTTATGATTGTGGGTTACGCGCGAAATGGGGAAGTGGAGTTGTGTTTGGGATTGTTGAGAGAGATGAGAGAGAGTTTATGCCGGCCAGATCAGTGGACTTTCAGTGCTGTTACGAGTGCTTGCGCGGAGACATTGGAATTTCGGTGTGGTTGCATGCTGCATGCTGTCATCATTAAAAGTGGTTGGAGCTCTTCTGTGGAGGTGAAGAACTCGGTTTTGAGTTTTTATGCTGAATTAGGTTGCCTTGACGATGCGGTTAAGGTGTTTGAGTCCGGTAATATGCTGACACAGGTGTCCTGGAATGCGATGATTGATGCCTACATGAAACTGGGAAATACTCATGAAGCACTTCGTGTATTTCAGCTATCCGGTGAACAAAATATTGTCTCATGGACGTCTATGATCTCAGGGTATGCAAGAAATGGACATGGTGAAGAAGCTGCAATCTTCTTTGTTGATATGTTGAGGACTGGACTCAAACCAGATGATTTCAGTTTTGCTGCTGTCCTTCATGCATGTTCGAACTTGGCATTACTTGGACGCGGGGAAATGTTCCATGCCTGCATAATTCACTATGGTTTCCATACATATGCGTTTATTGGGAATGGCCTGGTTAACATGTATGCTAAATGCGGGGATTTGAAAGGGTCCATCCGTGCATTCCATGAAATATTGCACAAGGATTTGGTATCTTGGAATGCGATGTTGTTTGCATTTGTATTACATGGAAAAGCTATCCAATCTCTACAAGTTTTTGAACAGATGGTGGTGACTGGGTTCAAACCAGATAATGTTACCTTTATCGGCTTGTTGATGGCTTGCAGCCATTCTGGATTGATCGGGGAAAGTCGTGCAATTTTTGAATCGATGCAGACAATTTATGGGCTCTCTCCTGAAAAAGATCATGTGGCATGCATGGTGGATATGCTTGGAAGAGGTGGTTACTTAGCTGAAGCGAAGAAATTGGCTGATAAGTATTGTTCAGTATATAGTGCTAAGACCAGCTCGTGTGAAGCTCTGCTTGGAGCATGTTCTGTGCATGGGGAGTTGGGATTTGGAAAATATTTTGGGGAATCTCTGAAAATAACAGAACCACATAATGAGACGAGCTATGTGTTATTGTCAAATTTGTATTGTGCAAGTGGGCAATGGAAGGAAGCTGAAATGGTTAGGAAGAGAATGGCAGATCAAGGGGTGAAGAAAATGCCTGGTTGTAGTTGGATTGAGGTGAGAAACGAGGTACTGTGTTTTGTTGCAGGGAAGAATTCTAATCCATTTATGGACGAGGTGTACATTACACTACAGTACATAAATTTTGAAATTAGGAATCCGTACTTTGTTGATGTTAGTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

626

Amino Acids

69.7

Weight (kDa)

7.05

Isoelectric Point (pI)

33.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	37 - 84	2.4e-08	PPR repeat family
PPR_2	PF13041	171 - 216	4.2e-09	PPR repeat family
PPR	PF01535	172 - 198	1.7e-06	PPR repeat
PPR	PF01535	272 - 295	8.1e-06	PPR repeat
PPR_2	PF13041	301 - 348	3e-11	PPR repeat family
PPR	PF01535	303 - 332	1.4e-06	PPR repeat
PPR_2	PF13041	402 - 449	1.3e-06	PPR repeat family
E_motif	PF20431	524 - 583	7.5e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36980 AT2G36980 AT2G36980
fragaria_vesca	FvH4_1g23230 FvH4_1g23230
malus_domestica	MD15G1335400.v1.1
prunus_persica	Prupe.6G167400_v2.0.a1
pyrus_communis	pycom15g29000
rosa_chinensis	RchiOBHm_Chr2g0118001
rosa_laevigata	RLG00000018386
rosa_multiflora	Rmu_sc0000948.1_g000020
rosa_roxburghii	Rroxscaffold_2G00126070
rosa_rugosa	Rorug02G0215300
rosa_samantha	Rh2AG271900 Rh2BG284000 Rh2CG325400 Rh2DG280300 Rh2DG298100
rosa_wichuraiana	Rw2G021500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	814
AatII	GACGTC	2 cut(s)	35, 920
AccB7I	CCANNNNNTGG	1 cut(s)	120
AccII	CGCG	6 cut(s)	254, 470, 542, 544, 647, 1065
AciI	CCGC	9 cut(s)	187, 231, 252, 254, 470, 647, 776, 1065, 1155
AcoI	YGGCCR	1 cut(s)	605
AcsI	RAATTY	4 cut(s)	659, 1648, 1786, 1834
AcuI	CTGAAG	1 cut(s)	1494
AcyI	GRCGYC	2 cut(s)	32, 917
AdeI	CACNNNGTG	1 cut(s)	875
AfaI	GTAC	4 cut(s)	1764, 1814, 1829, 1856
AfiI	CCNNNNNNNGG	1 cut(s)	120
AflIII	ACRYGT	1 cut(s)	1140
AgsI	TTSAA	5 cut(s)	1165, 1280, 1303, 1385, 1841
AjnI	CCWGG	3 cut(s)	818, 1131, 1729
AjuI	GAANNNNNNNTTGG	2 cut(s)	1527, 1559
AleI	CACNNNNGTG	1 cut(s)	233
Alw21I	GWGCWC	1 cut(s)	713
Alw26I	GTCTC	5 cut(s)	102, 397, 644, 913, 1619
Ama87I	CYCGRG	1 cut(s)	454
AoxI	GGCC	2 cut(s)	605, 1129
ApeKI	GCWGC	5 cut(s)	44, 679, 962, 1022, 1344
ApoI	RAATTY	4 cut(s)	659, 1648, 1786, 1834
Asp700I	GAANNNNTTC	1 cut(s)	870
AspA2I	CCTAGG	1 cut(s)	497
AspLEI	GCGC	4 cut(s)	251, 340, 544, 647
AspS9I	GGNCC	2 cut(s)	367, 1170
AsuII	TTCGAA	1 cut(s)	1043
AvaI	CYCGRG	1 cut(s)	454
AvaII	GGWCC	2 cut(s)	367, 1170
AvrII	CCTAGG	1 cut(s)	497
BanII	GRGCYC	2 cut(s)	713, 1410
BauI	CACGAG	2 cut(s)	474, 1528
BbsI	GAAGAC	1 cut(s)	149
Bbv12I	GWGCWC	1 cut(s)	713
BbvI	GCAGC	5 cut(s)	56, 666, 949, 1009, 1356
BccI	CCATC	4 cut(s)	156, 1181, 1279, 1330
BceAI	ACGGC	1 cut(s)	218
BciT130I	CCWGG	3 cut(s)	820, 1133, 1731
BclI	TGATCA	2 cut(s)	21, 214
BcoDI	GTCTC	5 cut(s)	102, 397, 644, 913, 1619
BfaI	CTAG	1 cut(s)	498
BfmI	CTRYAG	1 cut(s)	1823
BisI	GCNGC	9 cut(s)	45, 187, 252, 255, 471, 680, 963, 1023, 1345
BlnI	CCTAGG	1 cut(s)	497
BlsI	GCNGC	9 cut(s)	46, 188, 253, 256, 472, 681, 964, 1024, 1346
Bme1390I	CCNGG	3 cut(s)	820, 1133, 1731
Bme18I	GGWCC	2 cut(s)	367, 1170
BmeT110I	CYCGRG	1 cut(s)	454
BmgT120I	GGNCC	2 cut(s)	367, 1170
BmiI	GGNNCC	3 cut(s)	277, 369, 1171
BmrFI	CCNGG	3 cut(s)	820, 1133, 1731
BmrI	ACTGGG	2 cut(s)	860, 1305
BmsI	GCATC	3 cut(s)	763, 826, 1380
BmuI	ACTGGG	2 cut(s)	860, 1305
BpiI	GAAGAC	1 cut(s)	149
Bpu14I	TTCGAA	1 cut(s)	1043
Bsa29I	ATCGAT	1 cut(s)	1388
BsaHI	GRCGYC	2 cut(s)	32, 917
BsaJI	CCNNGG	2 cut(s)	252, 497
BsaWI	WCCGGW	2 cut(s)	794, 890
BsaXI	ACNNNNNCTCC	2 cut(s)	95, 125
Bsc4I	CCNNNNNNNGG	1 cut(s)	120
Bse118I	RCCGGY	2 cut(s)	325, 603
Bse1I	ACTGG	4 cut(s)	313, 855, 997, 1300
Bse3DI	GCAATG	3 cut(s)	114, 135, 1676
BseBI	CCWGG	3 cut(s)	820, 1133, 1731
BseCI	ATCGAT	1 cut(s)	1388
BseDI	CCNNGG	2 cut(s)	252, 497
BseGI	GGATG	1 cut(s)	1173
BseLI	CCNNNNNNNGG	1 cut(s)	120
BseMI	GCAATG	3 cut(s)	114, 135, 1676
BseMII	CTCAG	1 cut(s)	942
BseNI	ACTGG	4 cut(s)	313, 855, 997, 1300
BseRI	GAGGAG	1 cut(s)	410
BseXI	GCAGC	5 cut(s)	56, 666, 949, 1009, 1356
Bsh1236I	CGCG	6 cut(s)	254, 470, 542, 544, 647, 1065
BshFI	GGCC	2 cut(s)	607, 1131
BshVI	ATCGAT	1 cut(s)	1388
BsiHKAI	GWGCWC	1 cut(s)	713
BsiHKCI	CYCGRG	1 cut(s)	454
BsiSI	CCGG	4 cut(s)	326, 604, 795, 891
BslFI	GGGAC	1 cut(s)	471
BslI	CCNNNNNNNGG	1 cut(s)	120
BsmAI	GTCTC	5 cut(s)	102, 397, 644, 913, 1619
BsmBI	CGTCTC	1 cut(s)	1619
BsmFI	GGGAC	1 cut(s)	471
BsmI	GAATGC	3 cut(s)	829, 1181, 1225
BsnI	GGCC	2 cut(s)	607, 1131
BsoBI	CYCGRG	1 cut(s)	454
Bsp119I	TTCGAA	1 cut(s)	1043
Bsp1286I	GDGCHC	2 cut(s)	713, 1410
Bsp1407I	TGTACA	1 cut(s)	1812
Bsp143I	GATC	7 cut(s)	21, 214, 610, 924, 1359, 1423, 1708
BspACI	CCGC	9 cut(s)	187, 231, 252, 254, 470, 647, 776, 1065, 1155
BspANI	GGCC	2 cut(s)	607, 1131
BspCNI	CTCAG	1 cut(s)	941
BspDI	ATCGAT	1 cut(s)	1388
BspFNI	CGCG	6 cut(s)	254, 470, 542, 544, 647, 1065
BspHI	TCATGA	1 cut(s)	862
BspLI	GGNNCC	3 cut(s)	277, 369, 1171
BspQI	GCTCTTC	1 cut(s)	718
BspT104I	TTCGAA	1 cut(s)	1043
BsrDI	GCAATG	3 cut(s)	114, 135, 1676
BsrFI	RCCGGY	2 cut(s)	325, 603
BsrGI	TGTACA	1 cut(s)	1812
BsrI	ACTGG	4 cut(s)	313, 855, 997, 1300
BssAI	RCCGGY	2 cut(s)	325, 603
BssECI	CCNNGG	2 cut(s)	252, 497
BssMI	GATC	7 cut(s)	21, 214, 610, 924, 1359, 1423, 1708
BssNI	GRCGYC	2 cut(s)	32, 917
BssSI	CACGAG	2 cut(s)	474, 1528
BssT1I	CCWWGG	1 cut(s)	497
Bst2BI	CACGAG	2 cut(s)	474, 1528
Bst2UI	CCWGG	3 cut(s)	820, 1133, 1731
Bst4CI	ACNGT	5 cut(s)	87, 301, 462, 1767, 1827
Bst6I	CTCTTC	3 cut(s)	718, 1450, 1691
BstACI	GRCGYC	2 cut(s)	32, 917
BstAUI	TGTACA	1 cut(s)	1812
BstBI	TTCGAA	1 cut(s)	1043
BstC8I	GCNNGC	9 cut(s)	79, 247, 605, 643, 677, 684, 1084, 1342, 1435
BstDEI	CTNAG	4 cut(s)	407, 928, 1468, 1518
BstDSI	CCRYGG	1 cut(s)	252
BstEII	GGTNACC	1 cut(s)	308
BstF5I	GGATG	1 cut(s)	1173
BstFNI	CGCG	6 cut(s)	254, 470, 542, 544, 647, 1065
BstHHI	GCGC	4 cut(s)	251, 340, 544, 647
BstKTI	GATC	7 cut(s)	24, 217, 613, 927, 1362, 1426, 1711
BstMAI	GTCTC	5 cut(s)	102, 397, 644, 913, 1619
BstMBI	GATC	7 cut(s)	21, 214, 610, 924, 1359, 1423, 1708
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 125, 251
BstNI	CCWGG	3 cut(s)	820, 1133, 1731
BstNSI	RCATGY	6 cut(s)	679, 686, 1041, 1144, 1437, 1554
BstPI	GGTNACC	1 cut(s)	308
BstSCI	CCNGG	3 cut(s)	818, 1131, 1729
BstSFI	CTRYAG	1 cut(s)	1823
BstUI	CGCG	6 cut(s)	254, 470, 542, 544, 647, 1065
BstV1I	GCAGC	5 cut(s)	56, 666, 949, 1009, 1356
BstV2I	GAAGAC	1 cut(s)	149
BstXI	CCANNNNNNTGG	1 cut(s)	615
Bsu15I	ATCGAT	1 cut(s)	1388
BsuRI	GGCC	2 cut(s)	607, 1131
BsuTUI	ATCGAT	1 cut(s)	1388
BtgI	CCRYGG	1 cut(s)	252
BtgZI	GCGATG	2 cut(s)	842, 1238
BtsCI	GGATG	1 cut(s)	1173
BtsIMutI	CAGTG	4 cut(s)	17, 297, 620, 631
Cac8I	GCNNGC	9 cut(s)	79, 247, 605, 643, 677, 684, 1084, 1342, 1435
CciI	TCATGA	1 cut(s)	862
CfoI	GCGC	4 cut(s)	251, 340, 544, 647
Cfr10I	RCCGGY	2 cut(s)	325, 603
Cfr13I	GGNCC	2 cut(s)	367, 1170
Cfr42I	CCGCGG	1 cut(s)	255
ClaI	ATCGAT	1 cut(s)	1388
CseI	GACGC	2 cut(s)	476, 1071
Csp6I	GTAC	4 cut(s)	1763, 1813, 1828, 1855
CviQI	GTAC	4 cut(s)	1763, 1813, 1828, 1855
DdeI	CTNAG	4 cut(s)	407, 928, 1468, 1518
DpnI	GATC	7 cut(s)	23, 216, 612, 926, 1361, 1425, 1710
DpnII	GATC	7 cut(s)	21, 214, 610, 924, 1359, 1423, 1708
DraIII	CACNNNGTG	1 cut(s)	875
DrdI	GACNNNNNNGTC	1 cut(s)	814
DseDI	GACNNNNNNGTC	1 cut(s)	814
EaeI	YGGCCR	1 cut(s)	605
Eam1104I	CTCTTC	3 cut(s)	718, 1450, 1691
EarI	CTCTTC	3 cut(s)	718, 1450, 1691
Ecl136II	GAGCTC	1 cut(s)	711
Eco130I	CCWWGG	1 cut(s)	497
Eco24I	GRGCYC	2 cut(s)	713, 1410
Eco47I	GGWCC	2 cut(s)	367, 1170
Eco53kI	GAGCTC	1 cut(s)	711
Eco57I	CTGAAG	1 cut(s)	1494
Eco88I	CYCGRG	1 cut(s)	454
Eco91I	GGTNACC	1 cut(s)	308
EcoICRI	GAGCTC	1 cut(s)	711
EcoO65I	GGTNACC	1 cut(s)	308
EcoRI	GAATTC	1 cut(s)	1786
EcoRII	CCWGG	3 cut(s)	818, 1131, 1729
EcoT14I	CCWWGG	1 cut(s)	497
EcoT22I	ATGCAT	2 cut(s)	1039, 1439
EcoT38I	GRGCYC	2 cut(s)	713, 1410
ErhI	CCWWGG	1 cut(s)	497
Esp3I	CGTCTC	1 cut(s)	1619
FalI	AAGNNNNNCTT	2 cut(s)	1527, 1559
FaqI	GGGAC	1 cut(s)	471
FauI	CCCGC	2 cut(s)	1058, 1148
FauNDI	CATATG	1 cut(s)	1111
FbaI	TGATCA	2 cut(s)	21, 214
Fnu4HI	GCNGC	9 cut(s)	45, 187, 252, 255, 471, 680, 963, 1023, 1345
FokI	GGATG	1 cut(s)	1160
FriOI	GRGCYC	2 cut(s)	713, 1410
Fsp4HI	GCNGC	9 cut(s)	45, 187, 252, 255, 471, 680, 963, 1023, 1345
FspBI	CTAG	1 cut(s)	498
GlaI	GCGC	4 cut(s)	250, 339, 543, 646
GluI	GCNGC	9 cut(s)	45, 187, 252, 255, 471, 680, 963, 1023, 1345
HaeIII	GGCC	2 cut(s)	607, 1131
HapII	CCGG	4 cut(s)	326, 604, 795, 891
HgaI	GACGC	2 cut(s)	476, 1071
HhaI	GCGC	4 cut(s)	251, 340, 544, 647
Hin1I	GRCGYC	2 cut(s)	32, 917
Hin6I	GCGC	4 cut(s)	249, 338, 542, 645
HinP1I	GCGC	4 cut(s)	249, 338, 542, 645
HincII	GTYRAC	2 cut(s)	331, 1138
HindII	GTYRAC	2 cut(s)	331, 1138
HinfI	GANTC	7 cut(s)	110, 195, 791, 996, 1385, 1595, 1849
HpaI	GTTAAC	2 cut(s)	331, 1138
HpaII	CCGG	4 cut(s)	326, 604, 795, 891
Hpy166II	GTNNAC	5 cut(s)	331, 618, 896, 1138, 1813
Hpy188I	TCNGA	1 cut(s)	1602
Hpy188III	TCNNGA	5 cut(s)	456, 476, 863, 1353, 1415
Hpy8I	GTNNAC	5 cut(s)	331, 618, 896, 1138, 1813
Hpy99I	CGWCG	3 cut(s)	34, 37, 95
HpyAV	CCTTC	3 cut(s)	235, 1040, 1669
HpyCH4III	ACNGT	5 cut(s)	87, 301, 462, 1767, 1827
HpyCH4IV	ACGT	2 cut(s)	32, 917
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 125, 251
HpyF3I	CTNAG	4 cut(s)	407, 928, 1468, 1518
HpySE526I	ACGT	2 cut(s)	32, 917
Hsp92I	GRCGYC	2 cut(s)	32, 917
HspAI	GCGC	4 cut(s)	249, 338, 542, 645
KroI	GCCGGC	1 cut(s)	603
KroNI	GCCGGC	1 cut(s)	605
Ksp22I	TGATCA	2 cut(s)	21, 214
KspAI	GTTAAC	2 cut(s)	331, 1138
KspI	CCGCGG	1 cut(s)	255
Kzo9I	GATC	7 cut(s)	21, 214, 610, 924, 1359, 1423, 1708
LguI	GCTCTTC	1 cut(s)	718
LmnI	GCTCC	3 cut(s)	275, 708, 1547
Lsp1109I	GCAGC	5 cut(s)	56, 666, 949, 1009, 1356
LweI	GCATC	3 cut(s)	763, 826, 1380
MaeI	CTAG	1 cut(s)	498
MaeII	ACGT	2 cut(s)	32, 917
MaeIII	GTNAC	9 cut(s)	62, 295, 308, 418, 536, 631, 1291, 1315, 1463
MalI	GATC	7 cut(s)	23, 216, 612, 926, 1361, 1425, 1710
MboI	GATC	7 cut(s)	21, 214, 610, 924, 1359, 1423, 1708
MhlI	GDGCHC	2 cut(s)	713, 1410
MlyI	GAGTC	3 cut(s)	104, 800, 990
MmeI	TCCRAC	2 cut(s)	686, 1721
Mph1103I	ATGCAT	2 cut(s)	1039, 1439
MroNI	GCCGGC	1 cut(s)	603
MroXI	GAANNNNTTC	1 cut(s)	870
MseI	TTAA	6 cut(s)	239, 267, 330, 696, 780, 1137
MslI	CAYNNNNRTG	2 cut(s)	233, 1110
MspA1I	CMGCKG	1 cut(s)	254
MspI	CCGG	4 cut(s)	326, 604, 795, 891
MspR9I	CCNGG	3 cut(s)	820, 1133, 1731
Mva1269I	GAATGC	3 cut(s)	829, 1181, 1225
MvaI	CCWGG	3 cut(s)	820, 1133, 1731
MvnI	CGCG	6 cut(s)	254, 470, 542, 544, 647, 1065
MwoI	GCNNNNNNNGC	3 cut(s)	50, 125, 251
NaeI	GCCGGC	1 cut(s)	605
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	7 cut(s)	21, 214, 610, 924, 1359, 1423, 1708
NgoMIV	GCCGGC	1 cut(s)	603
NlaIV	GGNNCC	3 cut(s)	277, 369, 1171
NmuCI	GTSAC	3 cut(s)	62, 295, 1291
NsiI	ATGCAT	2 cut(s)	1039, 1439
NspI	RCATGY	6 cut(s)	679, 686, 1041, 1144, 1437, 1554
NspV	TTCGAA	1 cut(s)	1043
OliI	CACNNNNGTG	1 cut(s)	233
PaeI	GCATGC	3 cut(s)	679, 686, 1437
PagI	TCATGA	1 cut(s)	862
PciI	ACATGT	1 cut(s)	1140
PciSI	GCTCTTC	1 cut(s)	718
PctI	GAATGC	3 cut(s)	829, 1181, 1225
PdiI	GCCGGC	1 cut(s)	605
PdmI	GAANNNNTTC	1 cut(s)	870
PfeI	GAWTC	4 cut(s)	195, 1385, 1595, 1849
PflMI	CCANNNNNTGG	1 cut(s)	120
PfoI	TCCNGGA	1 cut(s)	818
PkrI	GCNGC	9 cut(s)	46, 188, 253, 256, 472, 681, 964, 1024, 1346
PleI	GAGTC	3 cut(s)	104, 799, 990
PpsI	GAGTC	3 cut(s)	104, 799, 990
PscI	ACATGT	1 cut(s)	1140
Psp124BI	GAGCTC	1 cut(s)	713
Psp6I	CCWGG	3 cut(s)	818, 1131, 1729
PspEI	GGTNACC	1 cut(s)	308
PspGI	CCWGG	3 cut(s)	818, 1131, 1729
PspN4I	GGNNCC	3 cut(s)	277, 369, 1171
PspPI	GGNCC	2 cut(s)	367, 1170
RsaI	GTAC	4 cut(s)	1764, 1814, 1829, 1856
RsaNI	GTAC	4 cut(s)	1763, 1813, 1828, 1855
RseI	CAYNNNNRTG	2 cut(s)	233, 1110
SacI	GAGCTC	1 cut(s)	713
SacII	CCGCGG	1 cut(s)	255
SapI	GCTCTTC	1 cut(s)	718
SaqAI	TTAA	6 cut(s)	239, 267, 330, 696, 780, 1137
SatI	GCNGC	9 cut(s)	45, 187, 252, 255, 471, 680, 963, 1023, 1345
Sau3AI	GATC	7 cut(s)	21, 214, 610, 924, 1359, 1423, 1708
Sau96I	GGNCC	2 cut(s)	367, 1170
SchI	GAGTC	3 cut(s)	104, 800, 990
ScrFI	CCNGG	3 cut(s)	820, 1133, 1731
SduI	GDGCHC	2 cut(s)	713, 1410
SfaNI	GCATC	3 cut(s)	763, 826, 1380
SfcI	CTRYAG	1 cut(s)	1823
Sfr303I	CCGCGG	1 cut(s)	255
SfuI	TTCGAA	1 cut(s)	1043
SgrBI	CCGCGG	1 cut(s)	255
SinI	GGWCC	2 cut(s)	367, 1170
SmiMI	CAYNNNNRTG	2 cut(s)	233, 1110
SphI	GCATGC	3 cut(s)	679, 686, 1437
SsiI	CCGC	9 cut(s)	187, 231, 252, 254, 470, 647, 776, 1065, 1155
SspI	AATATT	3 cut(s)	904, 1194, 1586
SspMI	CTAG	1 cut(s)	498
SstI	GAGCTC	1 cut(s)	713
StyD4I	CCNGG	3 cut(s)	818, 1131, 1729
StyI	CCWWGG	1 cut(s)	497
TaaI	ACNGT	5 cut(s)	87, 301, 462, 1767, 1827
TaiI	ACGT	2 cut(s)	35, 920
TaqI	TCGA	4 cut(s)	35, 90, 1043, 1388
TatI	WGTACW	2 cut(s)	1812, 1827
TauI	GCSGC	4 cut(s)	189, 254, 257, 473
TfiI	GAWTC	4 cut(s)	195, 1385, 1595, 1849
Tru1I	TTAA	6 cut(s)	239, 267, 330, 696, 780, 1137
Tru9I	TTAA	6 cut(s)	239, 267, 330, 696, 780, 1137
TscAI	CASTG	4 cut(s)	24, 304, 620, 631
TseFI	GTSAC	3 cut(s)	62, 295, 1291
TseI	GCWGC	5 cut(s)	44, 679, 962, 1022, 1344
Tsp45I	GTSAC	3 cut(s)	62, 295, 1291
TspDTI	ATGAA	5 cut(s)	429, 860, 879, 1022, 1203
TspGWI	ACGGA	2 cut(s)	1166, 1842
TspRI	CASTG	4 cut(s)	24, 304, 620, 631
Van91I	CCANNNNNTGG	1 cut(s)	120
VpaK11BI	GGWCC	2 cut(s)	367, 1170
XapI	RAATTY	4 cut(s)	659, 1648, 1786, 1834
XceI	RCATGY	6 cut(s)	679, 686, 1041, 1144, 1437, 1554
XmaJI	CCTAGG	1 cut(s)	497
XmnI	GAANNNNTTC	1 cut(s)	870
XspI	CTAG	1 cut(s)	498
ZraI	GACGTC	2 cut(s)	33, 918
Zsp2I	ATGCAT	2 cut(s)	1039, 1439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.