Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0012237

Physical Location & Seq

Genomic Coordinates Forward (+)

32388455 .. 32390332

Gene Structure 1878 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG271900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGACATGCAGTCAAACATTGATCAAAACGACGTCGAAGATAGCAGCCTTTGCAAGGTTGGGTCACATCAACCATGCCCGCCAACTGTTCGACGAAATGCCTCACAGAGACTCCATTGCTTGGAACGCAATGCTCACCGCCTATACCCAACTGGGCTTCCACCACCAAGCTCTCTCTCTTCTCCGCAGCATGAGAATCTCCAACACCCGGCCCGATCACTTCACCTTCACTGCTACACTAAGCGCCTGTGCCGGCGCATGTAACCTTCGATGTGGAGCCAAATTACATTGTGTACTCACTGTTTTGGGCTACCAGTCTTACTTGCCGGTCAACAATGCGCTTATTGATATGTATGGCAAGTGCTTGGAGCCTTGTAGTGCTACTAGAGTGTTTGAAGAGATGGAACTTAGGAATGAAGTAACTTGGTGTTCTTTGTTATTTGCATACACAAACTCCGGACTGTTTGACGCCGCGCGTCAAGTGTTTTGTGTAATGCCTAGAAGGGTGGAGAGAGCTTGGAATGTTGTGATTGTGGGTTATGCACGAAACGGGGAAGTGGAGATGTGTTTGGGGTTGTTGAAAGAGATGAAAGAGAGTTTGTGCCGGCCAGATCAGTGGACTTTCAGTGCTCTTATGAATGCTTGCGCAGAGGCATTGGAATTTCGGCGTGGTTGCATGCTGCATGCTTTCATCATTAAAAGTGGTTGGAGCTCTTCTGCGGAGGTGAAGAACTCGGTTTTGAGTTTTTATGCTGAATTAGGTTGCCTGGGCAATGCGGTGAAGGTGTTTGAGTCCGGTGGAACTCTAACACAGGTGTCCTGGAATGCGATGATTGATACCTACATGAAACTGGGAAATACCCATGAAGCACTTCGTGTGTTTCAGCTATCCCCTGAACAGAATATTGTCTCATGGACATCTATGATCTCAGGGTATGCAAGAAATGGACGTGGGGAAGAAGCTGCCATGTTCTTTGTTGATATGTTGAGAACTGGACTAGAACCTGATGATTTCAGTTTTGCTGCCGTCCTTCATGCATGTTCAAACTTAGCATTACTTGGATGCGGGGAAATGTTTCATGGTTGCATAATTCACTATGGTTTCCATGCATATGCGTTTATTGGGAACGGTTTGGTTAACATGTATGCTAAATGCGGGGATTTGAAAGGGTCCATCCGTGCATTCTGTGATATATTGCACAAGGATTTGGTATCTTGGAACGCGATGTTGTTTGCATTTGGATTACATGGAAAAGCTATTGAAACTCTACAATTTTTTGAACAAATGGTGGTAGATGGGGTCAAACCAGATAATGTTACCTTTATCGGCTTGTTGATGGCTTGCAGCCACTCTGGATTGATAGGAGAAAGTCGTGCACTTTTTGAAACAATGCAGACAATTTATGGGCTCTCTCCTGACAAATATCATGTGGCATGCATGGTGGATATGCTTGGAAGAGGTGGTTACTTAGCTGAAGCTAAGGAACTGACTGATAAGTATTGTTCAGTATATAATGCTAAGATCAGCTCGTGTGAAGCTCTGCTTGGAGCATGTTCTGCACATGGGGAGTTGGGATTTGGAAAATATTTGGGGGAAACGCTGAAAATAACAGAACCACATAATGAGACAAGCTATGTGTTATTGTCAAATTTGTACTGTGCAAGTGGGCAATGGAAGGAAGCTGAAATGGTTAGGAAGAGAATGGCAGATCAAGGGGTGAAGAAAATGCCTGGATGTAGTTGGATAGAAGTGAGAAACAAGGTAATGGCTTTTGTCGCAGGGAAGAATTCTGACCCATTTATGGATGACATGTATAATATACTACAGTACATTGATTTTGAAATCAGGAATCCATACATTGTTGATATTAATTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

625

Amino Acids

69.66

Weight (kDa)

6.35

Isoelectric Point (pI)

37.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	37 - 84	1.3e-08	PPR repeat family
PPR_2	PF13041	172 - 216	1.3e-11	PPR repeat family
PPR	PF01535	172 - 199	1.1e-06	PPR repeat
PPR_2	PF13041	301 - 348	6e-12	PPR repeat family
PPR	PF01535	303 - 332	9.2e-08	PPR repeat
PPR_2	PF13041	402 - 449	4e-07	PPR repeat family
E_motif	PF20431	523 - 583	5.4e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36980 AT2G36980 AT2G36980
fragaria_vesca	FvH4_1g23230 FvH4_1g23230
malus_domestica	MD15G1335400.v1.1
prunus_persica	Prupe.6G167400_v2.0.a1
pyrus_communis	pycom15g29000
rosa_chinensis	RchiOBHm_Chr2g0118001
rosa_laevigata	RLG00000018386
rosa_multiflora	Rmu_sc0000948.1_g000020
rosa_roxburghii	Rroxscaffold_2G00126070
rosa_rugosa	Rorug02G0215300
rosa_samantha	Rh2AG271900 Rh2BG284000 Rh2CG325400 Rh2DG280300 Rh2DG298100
rosa_wichuraiana	Rw2G021500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	35
Acc16I	TGCGCA	1 cut(s)	646
AccB7I	CCANNNNNTGG	1 cut(s)	120
AccII	CGCG	3 cut(s)	473, 475, 1223
AccIII	TCCGGA	1 cut(s)	455
AciI	CCGC	8 cut(s)	79, 138, 184, 471, 719, 776, 1065, 1155
AcoI	YGGCCR	1 cut(s)	605
AcsI	RAATTY	3 cut(s)	659, 1648, 1786
AcuI	CTGAAG	1 cut(s)	1494
AcyI	GRCGYC	2 cut(s)	32, 468
AdeI	CACNNNGTG	1 cut(s)	875
AfaI	GTAC	3 cut(s)	294, 1655, 1829
AfiI	CCNNNNNNNGG	4 cut(s)	54, 120, 207, 1801
AflIII	ACRYGT	2 cut(s)	1140, 1809
AgsI	TTSAA	8 cut(s)	395, 580, 1044, 1165, 1262, 1280, 1385, 1841
AhdI	GACNNNNNGTC	1 cut(s)	9
AjiI	CACGTC	1 cut(s)	950
AjnI	CCWGG	3 cut(s)	765, 818, 1729
AjuI	GAANNNNNNNTTGG	2 cut(s)	1527, 1559
Alw21I	GWGCWC	3 cut(s)	631, 713, 1378
Alw26I	GTCTC	3 cut(s)	102, 913, 1619
Alw44I	GTGCAC	1 cut(s)	1374
Aor13HI	TCCGGA	1 cut(s)	455
AoxI	GGCC	2 cut(s)	209, 605
ApaLI	GTGCAC	1 cut(s)	1374
ApeKI	GCWGC	6 cut(s)	44, 186, 679, 962, 1022, 1344
ApoI	RAATTY	3 cut(s)	659, 1648, 1786
AseI	ATTAAT	1 cut(s)	1869
Asp700I	GAANNNNTTC	2 cut(s)	870, 1074
AspLEI	GCGC	5 cut(s)	245, 257, 340, 475, 647
AspS9I	GGNCC	2 cut(s)	210, 1170
AsuC2I	CCSGG	1 cut(s)	208
AsuHPI	GGTGA	5 cut(s)	127, 214, 736, 790, 1729
AvaII	GGWCC	1 cut(s)	1170
BaeGI	GKGCMC	1 cut(s)	1378
BanII	GRGCYC	2 cut(s)	713, 1410
BauI	CACGAG	1 cut(s)	1528
Bbv12I	GWGCWC	3 cut(s)	631, 713, 1378
BbvI	GCAGC	6 cut(s)	56, 198, 666, 949, 1009, 1356
BccI	CCATC	4 cut(s)	394, 1181, 1289, 1330
BceAI	ACGGC	1 cut(s)	1010
BciT130I	CCWGG	3 cut(s)	767, 820, 1731
BclI	TGATCA	1 cut(s)	21
BcnI	CCSGG	1 cut(s)	208
BcoDI	GTCTC	3 cut(s)	102, 913, 1619
BfaI	CTAG	3 cut(s)	384, 498, 998
BfmI	CTRYAG	1 cut(s)	1823
BfoI	RGCGCY	1 cut(s)	246
BisI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
BlsI	GCNGC	7 cut(s)	46, 188, 472, 681, 964, 1024, 1346
Bme1390I	CCNGG	4 cut(s)	208, 767, 820, 1731
Bme18I	GGWCC	1 cut(s)	1170
BmeRI	GACNNNNNGTC	1 cut(s)	9
BmgBI	CACGTC	1 cut(s)	950
BmgT120I	GGNCC	2 cut(s)	210, 1170
BmiI	GGNNCC	3 cut(s)	277, 369, 1171
BmrFI	CCNGG	4 cut(s)	208, 767, 820, 1731
BmrI	ACTGGG	2 cut(s)	161, 860
BmsI	GCATC	1 cut(s)	1052
BmuI	ACTGGG	2 cut(s)	161, 860
Bpu10I	CCTNAGC	1 cut(s)	1479
BpuMI	CCSGG	1 cut(s)	208
BsaHI	GRCGYC	2 cut(s)	32, 468
BsaJI	CCNNGG	1 cut(s)	766
BsaWI	WCCGGW	2 cut(s)	455, 794
BsaXI	ACNNNNNCTCC	4 cut(s)	95, 125, 437, 467
Bsc4I	CCNNNNNNNGG	4 cut(s)	54, 120, 207, 1801
Bse118I	RCCGGY	3 cut(s)	251, 325, 603
Bse1I	ACTGG	4 cut(s)	156, 313, 855, 997
Bse3DI	GCAATG	4 cut(s)	114, 135, 778, 1676
BseAI	TCCGGA	1 cut(s)	455
BseBI	CCWGG	3 cut(s)	767, 820, 1731
BseDI	CCNNGG	1 cut(s)	766
BseGI	GGATG	4 cut(s)	1067, 1173, 1739, 1810
BseLI	CCNNNNNNNGG	4 cut(s)	54, 120, 207, 1801
BseMI	GCAATG	4 cut(s)	114, 135, 778, 1676
BseMII	CTCAG	1 cut(s)	942
BseNI	ACTGG	4 cut(s)	156, 313, 855, 997
BseSI	GKGCMC	1 cut(s)	1378
BseXI	GCAGC	6 cut(s)	56, 198, 666, 949, 1009, 1356
BsgI	GTGCAG	1 cut(s)	1542
Bsh1236I	CGCG	3 cut(s)	473, 475, 1223
BshFI	GGCC	2 cut(s)	211, 607
BsiHKAI	GWGCWC	3 cut(s)	631, 713, 1378
BsiSI	CCGG	6 cut(s)	208, 252, 326, 456, 604, 795
BslI	CCNNNNNNNGG	4 cut(s)	54, 120, 207, 1801
BsmAI	GTCTC	3 cut(s)	102, 913, 1619
BsmI	GAATGC	3 cut(s)	643, 829, 1181
BsnI	GGCC	2 cut(s)	211, 607
Bsp1286I	GDGCHC	4 cut(s)	631, 713, 1378, 1410
Bsp13I	TCCGGA	1 cut(s)	455
Bsp143I	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
BspACI	CCGC	8 cut(s)	79, 138, 184, 471, 719, 776, 1065, 1155
BspANI	GGCC	2 cut(s)	211, 607
BspCNI	CTCAG	1 cut(s)	941
BspEI	TCCGGA	1 cut(s)	455
BspFNI	CGCG	3 cut(s)	473, 475, 1223
BspLI	GGNNCC	3 cut(s)	277, 369, 1171
BspQI	GCTCTTC	1 cut(s)	718
BsrDI	GCAATG	4 cut(s)	114, 135, 778, 1676
BsrFI	RCCGGY	3 cut(s)	251, 325, 603
BsrI	ACTGG	4 cut(s)	156, 313, 855, 997
BssAI	RCCGGY	3 cut(s)	251, 325, 603
BssECI	CCNNGG	1 cut(s)	766
BssMI	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
BssNI	GRCGYC	2 cut(s)	32, 468
BssSI	CACGAG	1 cut(s)	1528
Bst2BI	CACGAG	1 cut(s)	1528
Bst2UI	CCWGG	3 cut(s)	767, 820, 1731
Bst4CI	ACNGT	6 cut(s)	87, 301, 462, 1130, 1658, 1827
Bst6I	CTCTTC	5 cut(s)	183, 390, 718, 1450, 1691
BstACI	GRCGYC	2 cut(s)	32, 468
BstAPI	GCANNNNNTGC	2 cut(s)	50, 1556
BstC8I	GCNNGC	8 cut(s)	79, 253, 605, 643, 677, 684, 1342, 1435
BstDEI	CTNAG	7 cut(s)	239, 407, 928, 1048, 1468, 1479, 1518
BstENI	CCTNNNNNAGG	1 cut(s)	52
BstF5I	GGATG	4 cut(s)	1067, 1173, 1739, 1810
BstFNI	CGCG	3 cut(s)	473, 475, 1223
BstH2I	RGCGCY	1 cut(s)	246
BstHHI	GCGC	5 cut(s)	245, 257, 340, 475, 647
BstKTI	GATC	6 cut(s)	24, 217, 613, 927, 1524, 1711
BstMAI	GTCTC	3 cut(s)	102, 913, 1619
BstMBI	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
BstMWI	GCNNNNNNNGC	4 cut(s)	50, 125, 1556, 1775
BstNI	CCWGG	3 cut(s)	767, 820, 1731
BstNSI	RCATGY	9 cut(s)	9, 261, 679, 686, 1041, 1144, 1437, 1554, 1813
BstSCI	CCNGG	4 cut(s)	206, 765, 818, 1729
BstSFI	CTRYAG	1 cut(s)	1823
BstSLI	GKGCMC	1 cut(s)	1378
BstUI	CGCG	3 cut(s)	473, 475, 1223
BstV1I	GCAGC	6 cut(s)	56, 198, 666, 949, 1009, 1356
BstXI	CCANNNNNNTGG	1 cut(s)	615
BsuRI	GGCC	2 cut(s)	211, 607
BtgZI	GCGATG	2 cut(s)	842, 1238
BtrI	CACGTC	1 cut(s)	950
BtsCI	GGATG	4 cut(s)	1067, 1173, 1739, 1810
BtsI	GCAGTG	1 cut(s)	228
BtsIMutI	CAGTG	4 cut(s)	228, 297, 620, 631
Cac8I	GCNNGC	8 cut(s)	79, 253, 605, 643, 677, 684, 1342, 1435
CfoI	GCGC	5 cut(s)	245, 257, 340, 475, 647
Cfr10I	RCCGGY	3 cut(s)	251, 325, 603
Cfr13I	GGNCC	2 cut(s)	210, 1170
CseI	GACGC	2 cut(s)	464, 476
Csp6I	GTAC	3 cut(s)	293, 1654, 1828
CviQI	GTAC	3 cut(s)	293, 1654, 1828
DdeI	CTNAG	7 cut(s)	239, 407, 928, 1048, 1468, 1479, 1518
DpnI	GATC	6 cut(s)	23, 216, 612, 926, 1523, 1710
DpnII	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
DraIII	CACNNNGTG	1 cut(s)	875
DriI	GACNNNNNGTC	1 cut(s)	9
EaeI	YGGCCR	1 cut(s)	605
Eam1104I	CTCTTC	5 cut(s)	183, 390, 718, 1450, 1691
Eam1105I	GACNNNNNGTC	1 cut(s)	9
EarI	CTCTTC	5 cut(s)	183, 390, 718, 1450, 1691
Ecl136II	GAGCTC	1 cut(s)	711
Eco24I	GRGCYC	2 cut(s)	713, 1410
Eco47I	GGWCC	1 cut(s)	1170
Eco53kI	GAGCTC	1 cut(s)	711
Eco57I	CTGAAG	1 cut(s)	1494
EcoICRI	GAGCTC	1 cut(s)	711
EcoNI	CCTNNNNNAGG	1 cut(s)	52
EcoRI	GAATTC	1 cut(s)	1786
EcoRII	CCWGG	3 cut(s)	765, 818, 1729
EcoT22I	ATGCAT	3 cut(s)	1039, 1111, 1439
EcoT38I	GRGCYC	2 cut(s)	713, 1410
FalI	AAGNNNNNCTT	2 cut(s)	1527, 1559
FauI	CCCGC	3 cut(s)	86, 1058, 1148
FauNDI	CATATG	1 cut(s)	1111
FbaI	TGATCA	1 cut(s)	21
Fnu4HI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
FokI	GGATG	4 cut(s)	1074, 1160, 1746, 1817
FriOI	GRGCYC	2 cut(s)	713, 1410
Fsp4HI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
FspBI	CTAG	3 cut(s)	384, 498, 998
FspI	TGCGCA	1 cut(s)	646
GlaI	GCGC	5 cut(s)	244, 256, 339, 474, 646
GluI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
HaeII	RGCGCY	1 cut(s)	246
HaeIII	GGCC	2 cut(s)	211, 607
HapII	CCGG	6 cut(s)	208, 252, 326, 456, 604, 795
HgaI	GACGC	2 cut(s)	464, 476
HhaI	GCGC	5 cut(s)	245, 257, 340, 475, 647
Hin1I	GRCGYC	2 cut(s)	32, 468
Hin6I	GCGC	5 cut(s)	243, 255, 338, 473, 645
HinP1I	GCGC	5 cut(s)	243, 255, 338, 473, 645
HincII	GTYRAC	2 cut(s)	331, 1138
HindII	GTYRAC	2 cut(s)	331, 1138
HinfI	GANTC	4 cut(s)	110, 195, 791, 1849
HpaI	GTTAAC	1 cut(s)	1138
HpaII	CCGG	6 cut(s)	208, 252, 326, 456, 604, 795
HphI	GGTGA	5 cut(s)	127, 214, 736, 790, 1729
Hpy166II	GTNNAC	5 cut(s)	293, 331, 618, 1138, 1376
Hpy188I	TCNGA	1 cut(s)	1792
Hpy188III	TCNNGA	4 cut(s)	456, 1353, 1415, 1846
Hpy8I	GTNNAC	5 cut(s)	293, 331, 618, 1138, 1376
Hpy99I	CGWCG	3 cut(s)	34, 37, 95
HpyAV	CCTTC	6 cut(s)	235, 275, 495, 775, 1040, 1669
HpyCH4III	ACNGT	6 cut(s)	87, 301, 462, 1130, 1658, 1827
HpyCH4IV	ACGT	2 cut(s)	32, 949
HpyF10VI	GCNNNNNNNGC	4 cut(s)	50, 125, 1556, 1775
HpyF3I	CTNAG	7 cut(s)	239, 407, 928, 1048, 1468, 1479, 1518
HpySE526I	ACGT	2 cut(s)	32, 949
Hsp92I	GRCGYC	2 cut(s)	32, 468
HspAI	GCGC	5 cut(s)	243, 255, 338, 473, 645
Kpn2I	TCCGGA	1 cut(s)	455
KroI	GCCGGC	2 cut(s)	251, 603
KroNI	GCCGGC	2 cut(s)	253, 605
Ksp22I	TGATCA	1 cut(s)	21
KspAI	GTTAAC	1 cut(s)	1138
Kzo9I	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
LguI	GCTCTTC	1 cut(s)	718
LmnI	GCTCC	4 cut(s)	275, 367, 708, 1547
Lsp1109I	GCAGC	6 cut(s)	56, 198, 666, 949, 1009, 1356
LweI	GCATC	1 cut(s)	1052
MaeI	CTAG	3 cut(s)	384, 498, 998
MaeII	ACGT	2 cut(s)	32, 949
MaeIII	GTNAC	5 cut(s)	62, 260, 418, 1315, 1463
MalI	GATC	6 cut(s)	23, 216, 612, 926, 1523, 1710
MboI	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
MhlI	GDGCHC	4 cut(s)	631, 713, 1378, 1410
MluCI	AATT	9 cut(s)	281, 659, 755, 1089, 1271, 1398, 1648, 1786, 1870
MlyI	GAGTC	2 cut(s)	104, 800
MmeI	TCCRAC	3 cut(s)	225, 686, 1721
MnlI	CCTC	4 cut(s)	111, 643, 715, 1451
Mph1103I	ATGCAT	3 cut(s)	1039, 1111, 1439
MroI	TCCGGA	1 cut(s)	455
MroNI	GCCGGC	2 cut(s)	251, 603
MroXI	GAANNNNTTC	2 cut(s)	870, 1074
MseI	TTAA	3 cut(s)	696, 1137, 1869
MslI	CAYNNNNRTG	1 cut(s)	1110
MspI	CCGG	6 cut(s)	208, 252, 326, 456, 604, 795
MspR9I	CCNGG	4 cut(s)	208, 767, 820, 1731
Mva1269I	GAATGC	3 cut(s)	643, 829, 1181
MvaI	CCWGG	3 cut(s)	767, 820, 1731
MvnI	CGCG	3 cut(s)	473, 475, 1223
MwoI	GCNNNNNNNGC	4 cut(s)	50, 125, 1556, 1775
NaeI	GCCGGC	2 cut(s)	253, 605
NciI	CCSGG	1 cut(s)	208
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
NgoMIV	GCCGGC	2 cut(s)	251, 603
NlaIV	GGNNCC	3 cut(s)	277, 369, 1171
NmuCI	GTSAC	1 cut(s)	62
NsbI	TGCGCA	1 cut(s)	646
NsiI	ATGCAT	3 cut(s)	1039, 1111, 1439
NspI	RCATGY	9 cut(s)	9, 261, 679, 686, 1041, 1144, 1437, 1554, 1813
PaeI	GCATGC	3 cut(s)	679, 686, 1437
PciI	ACATGT	2 cut(s)	1140, 1809
PciSI	GCTCTTC	1 cut(s)	718
PctI	GAATGC	3 cut(s)	643, 829, 1181
PdiI	GCCGGC	2 cut(s)	253, 605
PdmI	GAANNNNTTC	2 cut(s)	870, 1074
PfeI	GAWTC	2 cut(s)	195, 1849
PflMI	CCANNNNNTGG	1 cut(s)	120
PfoI	TCCNGGA	1 cut(s)	818
PkrI	GCNGC	7 cut(s)	46, 188, 472, 681, 964, 1024, 1346
PleI	GAGTC	2 cut(s)	104, 799
PpsI	GAGTC	2 cut(s)	104, 799
PscI	ACATGT	2 cut(s)	1140, 1809
PshBI	ATTAAT	1 cut(s)	1869
Psp124BI	GAGCTC	1 cut(s)	713
Psp6I	CCWGG	3 cut(s)	765, 818, 1729
PspGI	CCWGG	3 cut(s)	765, 818, 1729
PspN4I	GGNNCC	3 cut(s)	277, 369, 1171
PspPI	GGNCC	2 cut(s)	210, 1170
RsaI	GTAC	3 cut(s)	294, 1655, 1829
RsaNI	GTAC	3 cut(s)	293, 1654, 1828
RseI	CAYNNNNRTG	1 cut(s)	1110
SacI	GAGCTC	1 cut(s)	713
SapI	GCTCTTC	1 cut(s)	718
SaqAI	TTAA	3 cut(s)	696, 1137, 1869
SatI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
Sau3AI	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
Sau96I	GGNCC	2 cut(s)	210, 1170
SchI	GAGTC	2 cut(s)	104, 800
ScrFI	CCNGG	4 cut(s)	208, 767, 820, 1731
SduI	GDGCHC	4 cut(s)	631, 713, 1378, 1410
SfaNI	GCATC	1 cut(s)	1052
SfcI	CTRYAG	1 cut(s)	1823
SinI	GGWCC	1 cut(s)	1170
SmiMI	CAYNNNNRTG	1 cut(s)	1110
SphI	GCATGC	3 cut(s)	679, 686, 1437
Sse9I	AATT	9 cut(s)	281, 659, 755, 1089, 1271, 1398, 1648, 1786, 1870
SsiI	CCGC	8 cut(s)	79, 138, 184, 471, 719, 776, 1065, 1155
SspI	AATATT	2 cut(s)	904, 1586
SspMI	CTAG	3 cut(s)	384, 498, 998
SstI	GAGCTC	1 cut(s)	713
StyD4I	CCNGG	4 cut(s)	206, 765, 818, 1729
TaaI	ACNGT	6 cut(s)	87, 301, 462, 1130, 1658, 1827
TaiI	ACGT	2 cut(s)	35, 952
TaqI	TCGA	3 cut(s)	35, 90, 268
TasI	AATT	9 cut(s)	281, 659, 755, 1089, 1271, 1398, 1648, 1786, 1870
TatI	WGTACW	3 cut(s)	292, 1653, 1827
TauI	GCSGC	1 cut(s)	473
TfiI	GAWTC	2 cut(s)	195, 1849
Tru1I	TTAA	3 cut(s)	696, 1137, 1869
Tru9I	TTAA	3 cut(s)	696, 1137, 1869
TscAI	CASTG	4 cut(s)	235, 304, 620, 631
TseFI	GTSAC	1 cut(s)	62
TseI	GCWGC	6 cut(s)	44, 186, 679, 962, 1022, 1344
Tsp45I	GTSAC	1 cut(s)	62
TspDTI	ATGAA	8 cut(s)	429, 602, 650, 679, 860, 879, 1022, 1067
TspGWI	ACGGA	1 cut(s)	1166
TspRI	CASTG	4 cut(s)	235, 304, 620, 631
Van91I	CCANNNNNTGG	1 cut(s)	120
VneI	GTGCAC	1 cut(s)	1374
VpaK11BI	GGWCC	1 cut(s)	1170
VspI	ATTAAT	1 cut(s)	1869
XagI	CCTNNNNNAGG	1 cut(s)	52
XapI	RAATTY	3 cut(s)	659, 1648, 1786
XceI	RCATGY	9 cut(s)	9, 261, 679, 686, 1041, 1144, 1437, 1554, 1813
XmnI	GAANNNNTTC	2 cut(s)	870, 1074
XspI	CTAG	3 cut(s)	384, 498, 998
ZraI	GACGTC	1 cut(s)	33
Zsp2I	ATGCAT	3 cut(s)	1039, 1111, 1439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.