Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0012237

Physical Location & Seq

Genomic Coordinates Reverse (-)

41966449 .. 41968325

Gene Structure 1877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG325400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGACATGCACTCAAACATTGATCAAAACGACGTCGAAGATAGCAGCCCTTGCAAGGTTGGGTCACATCAACCATGCCCGCCAACTGTTCGACCGAATGCCTCAGAGAGACTCCATTGCTTGGAACGCAATGCTCACCGCCTATACCCAACTGGGCTTCCACCACCAAGCTCTCTCCCTTCTCCGCCGCATGAGAATCTCCAACACCCGGCCTGATCACTTTACCTTCACTGCTACAGTAAGTGCCTGCGCCGGCGCATGTAACCTTCAATATGGAACCAAATTACATTGTTTACTCATTGTTTTGGGTTACCAGTCTTACTTGCCGGTCAACAATGCGCTTATTGATATGTATGGGAAATGTTTAGAGCATTGCAGTGCTACTGGAGTGTTTGAAGAGATGAAACTTAGGAATGAAGTAACTTGGTGTTCTTTGTTATTTGCATACACAAACTCCGGACTGTTTGACGCCGCGCGTGAAGTGTTTTGTGTAATGCCTAGAAGGGTGGAGAGAGCTTGGAATGTTATGATTGTGGGTTATGCACGAAACGGGGAAGTGGAGATGTGTTTGGGGTTGTTGAAAGAGATGAAAGAGAGTTTGTGTCGGCCAGATCACTGGACTTTCAGTGCTCTTATGAATGCTTGTGCGGAAGCATTAGAGTTTTGGTGTGGTTGCATGCTGCATTCTTTCATCATTAAAAGTGGTTGGAGCACTTCTCCGGAGGTGAAGAACTCGATTTTGAGTTTTTATGCTGAATTAGGTTGCTTGGGCAATGCGGTGAAGGTGTTTGAGTCCGGTGGAACTCTAACACAGGTGTCCTGGAATGCGATGATTGATACCTACATGAAACTGGGAAATACCCATGAAGCACTTCGTGTGTTTCAGCTATCCCCTGAACAGAATATTGTCTCATGGACTTCTATGATCTCAGGGTATGCAAGAAATGGATGTGGGGAAGAAGCTGCAATGTTCTTTGTTGATATGTTGAGAACTGGACTAGAACCAGATGATTTCAGTTTTGCTGCTGGCCTTCATGCATGTTCAAGCTTAGCATTACTTGGACGCGGGGAAATGTTTCATGGTTGCATAATTCACTATGGTTTCCATGCATATGCGTTTATTGGGAACGGCTTGGTTAACATGTATGCTAAATGCGGGGATTTGAAAGGGTCCATCCGTGCATTCTGTGATATATTGCACAAGGATTTGGTATCTTGGAACGCGATGTTGTTTGCATTTGGATTACATGGAAAAGCTATCGAAACTCTACAATTTTTTGAACAAATGGTGGTAAATAGGGTGAAACCAGATAATGTTACCTTTATTGGTTTGTTGATGGCTTGCAGCCACTCTGGATTGATAGGAGAAAGTCGTGCACTTTTTGAAACAATGCAGGCAATTTATGGGCTCTCTCCTGACAAATATCATGTGGCATGCATGGTGGATATGCTTGGAAGAGGTGGTTACTTAGCTGAAGCTAAGGAACTGGCTGATAAGTATTGTTCAGTATATGGTGCTAAGATCAGCTCGCCTGATGCTCTGCTTGGAGCATGTTCTGCACATGGGGAGTTGAGATTTGGAAAATATTTGGGGGAAATGCTGAAAATGACAGAACCACATAATGAGACAAGCTATGTGTTATTGTCAAATTTGTATTGTGCAAGTGGGCAATGGAAGGAAGCTGAAATGGTTAGGAAGAGAATGGCAGATCAAGGGGTGAAGAAAATGCCTGGATGTAGTTGGATAGAAGTGAGAAACAAGGAATCCATACTGATGTGTGTTGACTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

596

Amino Acids

66.41

Weight (kDa)

7.01

Isoelectric Point (pI)

37.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	37 - 84	3.4e-08	PPR repeat family
PPR_2	PF13041	172 - 216	4.4e-12	PPR repeat family
PPR	PF01535	172 - 199	1.8e-07	PPR repeat
PPR_2	PF13041	301 - 347	8.7e-10	PPR repeat family
PPR	PF01535	303 - 332	1.8e-07	PPR repeat
PPR_2	PF13041	402 - 449	1.1e-06	PPR repeat family
E_motif	PF20431	523 - 583	3.7e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36980 AT2G36980 AT2G36980
fragaria_vesca	FvH4_1g23230 FvH4_1g23230
malus_domestica	MD15G1335400.v1.1
prunus_persica	Prupe.6G167400_v2.0.a1
pyrus_communis	pycom15g29000
rosa_chinensis	RchiOBHm_Chr2g0118001
rosa_laevigata	RLG00000018386
rosa_multiflora	Rmu_sc0000948.1_g000020
rosa_roxburghii	Rroxscaffold_2G00126070
rosa_rugosa	Rorug02G0215300
rosa_samantha	Rh2AG271900 Rh2BG284000 Rh2CG325400 Rh2DG280300 Rh2DG298100
rosa_wichuraiana	Rw2G021500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	35
AccB7I	CCANNNNNTGG	1 cut(s)	120
AccII	CGCG	4 cut(s)	473, 475, 1065, 1223
AccIII	TCCGGA	2 cut(s)	455, 718
AciI	CCGC	9 cut(s)	79, 138, 184, 187, 471, 647, 776, 1065, 1155
AcoI	YGGCCR	1 cut(s)	605
AcsI	RAATTY	1 cut(s)	1648
AcuI	CTGAAG	1 cut(s)	1494
AcyI	GRCGYC	2 cut(s)	32, 468
AdeI	CACNNNGTG	1 cut(s)	875
AfiI	CCNNNNNNNGG	3 cut(s)	54, 120, 207
AflIII	ACRYGT	1 cut(s)	1140
AgsI	TTSAA	7 cut(s)	269, 395, 580, 1044, 1165, 1280, 1385
AjnI	CCWGG	2 cut(s)	818, 1729
Alw21I	GWGCWC	3 cut(s)	631, 713, 1378
Alw26I	GTCTC	3 cut(s)	102, 913, 1619
Alw44I	GTGCAC	1 cut(s)	1374
Aor13HI	TCCGGA	2 cut(s)	455, 718
AoxI	GGCC	3 cut(s)	209, 605, 1027
ApaLI	GTGCAC	1 cut(s)	1374
ApeKI	GCWGC	5 cut(s)	44, 679, 962, 1022, 1344
ApoI	RAATTY	1 cut(s)	1648
Asp700I	GAANNNNTTC	2 cut(s)	870, 1074
AspLEI	GCGC	4 cut(s)	251, 257, 340, 475
AspS9I	GGNCC	1 cut(s)	1170
AsuC2I	CCSGG	1 cut(s)	208
AsuHPI	GGTGA	5 cut(s)	127, 736, 790, 1312, 1729
AvaII	GGWCC	1 cut(s)	1170
BaeGI	GKGCMC	1 cut(s)	1378
BanII	GRGCYC	1 cut(s)	1410
Bbv12I	GWGCWC	3 cut(s)	631, 713, 1378
BbvI	GCAGC	5 cut(s)	56, 666, 949, 1009, 1356
BccI	CCATC	2 cut(s)	1181, 1330
BceAI	ACGGC	1 cut(s)	1144
BciT130I	CCWGG	2 cut(s)	820, 1731
BclI	TGATCA	2 cut(s)	21, 214
BcnI	CCSGG	1 cut(s)	208
BcoDI	GTCTC	3 cut(s)	102, 913, 1619
BfaI	CTAG	2 cut(s)	498, 998
BfmI	CTRYAG	1 cut(s)	234
BisI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
BlpI	GCTNAGC	1 cut(s)	1048
BlsI	GCNGC	7 cut(s)	46, 188, 472, 681, 964, 1024, 1346
Bme1390I	CCNGG	3 cut(s)	208, 820, 1731
Bme18I	GGWCC	1 cut(s)	1170
BmgT120I	GGNCC	1 cut(s)	1170
BmiI	GGNNCC	2 cut(s)	277, 1171
BmrFI	CCNGG	3 cut(s)	208, 820, 1731
BmrI	ACTGGG	2 cut(s)	161, 860
BmsI	GCATC	1 cut(s)	1525
BmuI	ACTGGG	2 cut(s)	161, 860
BplI	GAGNNNNNCTC	2 cut(s)	700, 732
BpmI	CTGGAG	1 cut(s)	405
Bpu10I	CCTNAGC	1 cut(s)	1479
Bpu1102I	GCTNAGC	1 cut(s)	1048
BpuMI	CCSGG	1 cut(s)	208
BsaHI	GRCGYC	2 cut(s)	32, 468
BsaWI	WCCGGW	3 cut(s)	455, 718, 794
BsaXI	ACNNNNNCTCC	2 cut(s)	437, 467
Bsc4I	CCNNNNNNNGG	3 cut(s)	54, 120, 207
Bse118I	RCCGGY	2 cut(s)	251, 325
Bse1I	ACTGG	7 cut(s)	156, 313, 388, 620, 855, 997, 1491
Bse3DI	GCAATG	6 cut(s)	114, 135, 370, 778, 972, 1676
BseAI	TCCGGA	2 cut(s)	455, 718
BseBI	CCWGG	2 cut(s)	820, 1731
BseGI	GGATG	3 cut(s)	953, 1173, 1739
BseLI	CCNNNNNNNGG	3 cut(s)	54, 120, 207
BseMI	GCAATG	6 cut(s)	114, 135, 370, 778, 972, 1676
BseMII	CTCAG	2 cut(s)	116, 942
BseNI	ACTGG	7 cut(s)	156, 313, 388, 620, 855, 997, 1491
BseSI	GKGCMC	1 cut(s)	1378
BseXI	GCAGC	5 cut(s)	56, 666, 949, 1009, 1356
BsgI	GTGCAG	1 cut(s)	1542
Bsh1236I	CGCG	4 cut(s)	473, 475, 1065, 1223
Bsh1285I	CGRYCG	1 cut(s)	94
BshFI	GGCC	3 cut(s)	211, 607, 1029
BsiEI	CGRYCG	1 cut(s)	94
BsiHKAI	GWGCWC	3 cut(s)	631, 713, 1378
BsiSI	CCGG	6 cut(s)	208, 252, 326, 456, 719, 795
BslI	CCNNNNNNNGG	3 cut(s)	54, 120, 207
BsmAI	GTCTC	3 cut(s)	102, 913, 1619
BsmI	GAATGC	5 cut(s)	102, 643, 682, 829, 1181
BsnI	GGCC	3 cut(s)	211, 607, 1029
Bsp1286I	GDGCHC	4 cut(s)	631, 713, 1378, 1410
Bsp13I	TCCGGA	2 cut(s)	455, 718
Bsp143I	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
Bsp1720I	GCTNAGC	1 cut(s)	1048
BspACI	CCGC	9 cut(s)	79, 138, 184, 187, 471, 647, 776, 1065, 1155
BspANI	GGCC	3 cut(s)	211, 607, 1029
BspCNI	CTCAG	2 cut(s)	115, 941
BspEI	TCCGGA	2 cut(s)	455, 718
BspFNI	CGCG	4 cut(s)	473, 475, 1065, 1223
BspLI	GGNNCC	2 cut(s)	277, 1171
BsrDI	GCAATG	6 cut(s)	114, 135, 370, 778, 972, 1676
BsrFI	RCCGGY	2 cut(s)	251, 325
BsrI	ACTGG	7 cut(s)	156, 313, 388, 620, 855, 997, 1491
BssAI	RCCGGY	2 cut(s)	251, 325
BssMI	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
BssNI	GRCGYC	2 cut(s)	32, 468
Bst2UI	CCWGG	2 cut(s)	820, 1731
Bst4CI	ACNGT	3 cut(s)	87, 238, 462
Bst6I	CTCTTC	3 cut(s)	390, 1450, 1691
BstACI	GRCGYC	2 cut(s)	32, 468
BstAPI	GCANNNNNTGC	2 cut(s)	50, 1556
BstC8I	GCNNGC	9 cut(s)	79, 247, 253, 677, 1027, 1342, 1395, 1435, 1529
BstDEI	CTNAG	7 cut(s)	102, 407, 928, 1048, 1468, 1479, 1518
BstEII	GGTNACC	1 cut(s)	308
BstF5I	GGATG	3 cut(s)	953, 1173, 1739
BstFNI	CGCG	4 cut(s)	473, 475, 1065, 1223
BstHHI	GCGC	4 cut(s)	251, 257, 340, 475
BstKTI	GATC	6 cut(s)	24, 217, 613, 927, 1524, 1711
BstMAI	GTCTC	3 cut(s)	102, 913, 1619
BstMBI	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
BstMCI	CGRYCG	1 cut(s)	94
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 125, 1556
BstNI	CCWGG	2 cut(s)	820, 1731
BstNSI	RCATGY	7 cut(s)	9, 261, 679, 1041, 1144, 1437, 1554
BstPI	GGTNACC	1 cut(s)	308
BstSCI	CCNGG	3 cut(s)	206, 818, 1729
BstSFI	CTRYAG	1 cut(s)	234
BstSLI	GKGCMC	1 cut(s)	1378
BstUI	CGCG	4 cut(s)	473, 475, 1065, 1223
BstV1I	GCAGC	5 cut(s)	56, 666, 949, 1009, 1356
BstXI	CCANNNNNNTGG	1 cut(s)	615
BsuRI	GGCC	3 cut(s)	211, 607, 1029
BtgZI	GCGATG	2 cut(s)	842, 1238
BtsCI	GGATG	3 cut(s)	953, 1173, 1739
BtsI	GCAGTG	2 cut(s)	228, 382
BtsIMutI	CAGTG	4 cut(s)	228, 382, 613, 631
Cac8I	GCNNGC	9 cut(s)	79, 247, 253, 677, 1027, 1342, 1395, 1435, 1529
CfoI	GCGC	4 cut(s)	251, 257, 340, 475
Cfr10I	RCCGGY	2 cut(s)	251, 325
Cfr13I	GGNCC	1 cut(s)	1170
CseI	GACGC	2 cut(s)	476, 1071
DdeI	CTNAG	7 cut(s)	102, 407, 928, 1048, 1468, 1479, 1518
DpnI	GATC	6 cut(s)	23, 216, 612, 926, 1523, 1710
DpnII	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
DraIII	CACNNNGTG	1 cut(s)	875
EaeI	YGGCCR	1 cut(s)	605
Eam1104I	CTCTTC	3 cut(s)	390, 1450, 1691
EarI	CTCTTC	3 cut(s)	390, 1450, 1691
EciI	GGCGGA	1 cut(s)	173
Eco24I	GRGCYC	1 cut(s)	1410
Eco47I	GGWCC	1 cut(s)	1170
Eco57I	CTGAAG	1 cut(s)	1494
Eco91I	GGTNACC	1 cut(s)	308
EcoO65I	GGTNACC	1 cut(s)	308
EcoRII	CCWGG	2 cut(s)	818, 1729
EcoT22I	ATGCAT	3 cut(s)	1039, 1111, 1439
EcoT38I	GRGCYC	1 cut(s)	1410
FauI	CCCGC	3 cut(s)	86, 1058, 1148
FauNDI	CATATG	1 cut(s)	1111
FbaI	TGATCA	2 cut(s)	21, 214
Fnu4HI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
FokI	GGATG	3 cut(s)	960, 1160, 1746
FriOI	GRGCYC	1 cut(s)	1410
Fsp4HI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
FspBI	CTAG	2 cut(s)	498, 998
GlaI	GCGC	4 cut(s)	250, 256, 339, 474
GluI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
GsuI	CTGGAG	1 cut(s)	405
HaeIII	GGCC	3 cut(s)	211, 607, 1029
HapII	CCGG	6 cut(s)	208, 252, 326, 456, 719, 795
HgaI	GACGC	2 cut(s)	476, 1071
HhaI	GCGC	4 cut(s)	251, 257, 340, 475
Hin1I	GRCGYC	2 cut(s)	32, 468
Hin6I	GCGC	4 cut(s)	249, 255, 338, 473
HinP1I	GCGC	4 cut(s)	249, 255, 338, 473
HincII	GTYRAC	3 cut(s)	331, 1138, 1783
HindII	GTYRAC	3 cut(s)	331, 1138, 1783
HindIII	AAGCTT	1 cut(s)	1045
HinfI	GANTC	4 cut(s)	110, 195, 791, 1763
HpaI	GTTAAC	1 cut(s)	1138
HpaII	CCGG	6 cut(s)	208, 252, 326, 456, 719, 795
HphI	GGTGA	5 cut(s)	127, 736, 790, 1312, 1729
Hpy166II	GTNNAC	5 cut(s)	293, 331, 1138, 1376, 1783
Hpy188I	TCNGA	1 cut(s)	105
Hpy188III	TCNNGA	4 cut(s)	456, 719, 1353, 1415
Hpy8I	GTNNAC	5 cut(s)	293, 331, 1138, 1376, 1783
Hpy99I	CGWCG	2 cut(s)	34, 37
HpyAV	CCTTC	7 cut(s)	188, 235, 275, 495, 775, 1040, 1669
HpyCH4III	ACNGT	3 cut(s)	87, 238, 462
HpyCH4IV	ACGT	1 cut(s)	32
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 125, 1556
HpyF3I	CTNAG	7 cut(s)	102, 407, 928, 1048, 1468, 1479, 1518
HpySE526I	ACGT	1 cut(s)	32
Hsp92I	GRCGYC	2 cut(s)	32, 468
HspAI	GCGC	4 cut(s)	249, 255, 338, 473
Kpn2I	TCCGGA	2 cut(s)	455, 718
KroI	GCCGGC	1 cut(s)	251
KroNI	GCCGGC	1 cut(s)	253
Ksp22I	TGATCA	2 cut(s)	21, 214
KspAI	GTTAAC	1 cut(s)	1138
Kzo9I	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
LmnI	GCTCC	2 cut(s)	708, 1547
Lsp1109I	GCAGC	5 cut(s)	56, 666, 949, 1009, 1356
LweI	GCATC	1 cut(s)	1525
MaeI	CTAG	2 cut(s)	498, 998
MaeII	ACGT	1 cut(s)	32
MaeIII	GTNAC	6 cut(s)	62, 260, 308, 418, 1315, 1463
MalI	GATC	6 cut(s)	23, 216, 612, 926, 1523, 1710
MboI	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
MboII	GAAGA	7 cut(s)	49, 407, 739, 968, 1467, 1708, 1732
MhlI	GDGCHC	4 cut(s)	631, 713, 1378, 1410
MluCI	AATT	6 cut(s)	281, 755, 1089, 1271, 1398, 1648
MlyI	GAGTC	2 cut(s)	104, 800
MmeI	TCCRAC	3 cut(s)	225, 686, 1721
MnlI	CCTC	3 cut(s)	111, 715, 1451
Mph1103I	ATGCAT	3 cut(s)	1039, 1111, 1439
MreI	CGCCGGCG	1 cut(s)	251
MroI	TCCGGA	2 cut(s)	455, 718
MroNI	GCCGGC	1 cut(s)	251
MroXI	GAANNNNTTC	2 cut(s)	870, 1074
MseI	TTAA	2 cut(s)	696, 1137
MslI	CAYNNNNRTG	3 cut(s)	375, 1110, 1772
MspI	CCGG	6 cut(s)	208, 252, 326, 456, 719, 795
MspR9I	CCNGG	3 cut(s)	208, 820, 1731
Mva1269I	GAATGC	5 cut(s)	102, 643, 682, 829, 1181
MvaI	CCWGG	2 cut(s)	820, 1731
MvnI	CGCG	4 cut(s)	473, 475, 1065, 1223
MwoI	GCNNNNNNNGC	3 cut(s)	50, 125, 1556
NaeI	GCCGGC	1 cut(s)	253
NciI	CCSGG	1 cut(s)	208
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
NgoMIV	GCCGGC	1 cut(s)	251
NlaIV	GGNNCC	2 cut(s)	277, 1171
NmuCI	GTSAC	1 cut(s)	62
NsiI	ATGCAT	3 cut(s)	1039, 1111, 1439
NspI	RCATGY	7 cut(s)	9, 261, 679, 1041, 1144, 1437, 1554
PaeI	GCATGC	2 cut(s)	679, 1437
PciI	ACATGT	1 cut(s)	1140
PctI	GAATGC	5 cut(s)	102, 643, 682, 829, 1181
PdiI	GCCGGC	1 cut(s)	253
PdmI	GAANNNNTTC	2 cut(s)	870, 1074
PfeI	GAWTC	2 cut(s)	195, 1763
PflMI	CCANNNNNTGG	1 cut(s)	120
PfoI	TCCNGGA	1 cut(s)	818
PkrI	GCNGC	7 cut(s)	46, 188, 472, 681, 964, 1024, 1346
PleI	GAGTC	2 cut(s)	104, 799
PpsI	GAGTC	2 cut(s)	104, 799
PscI	ACATGT	1 cut(s)	1140
Psp6I	CCWGG	2 cut(s)	818, 1729
PspEI	GGTNACC	1 cut(s)	308
PspGI	CCWGG	2 cut(s)	818, 1729
PspN4I	GGNNCC	2 cut(s)	277, 1171
PspPI	GGNCC	1 cut(s)	1170
RseI	CAYNNNNRTG	3 cut(s)	375, 1110, 1772
SaqAI	TTAA	2 cut(s)	696, 1137
SatI	GCNGC	7 cut(s)	45, 187, 471, 680, 963, 1023, 1345
Sau3AI	GATC	6 cut(s)	21, 214, 610, 924, 1521, 1708
Sau96I	GGNCC	1 cut(s)	1170
SchI	GAGTC	2 cut(s)	104, 800
ScrFI	CCNGG	3 cut(s)	208, 820, 1731
SduI	GDGCHC	4 cut(s)	631, 713, 1378, 1410
SfaNI	GCATC	1 cut(s)	1525
SfcI	CTRYAG	1 cut(s)	234
SgrAI	CRCCGGYG	1 cut(s)	251
SinI	GGWCC	1 cut(s)	1170
SmiMI	CAYNNNNRTG	3 cut(s)	375, 1110, 1772
SphI	GCATGC	2 cut(s)	679, 1437
Sse9I	AATT	6 cut(s)	281, 755, 1089, 1271, 1398, 1648
SsiI	CCGC	9 cut(s)	79, 138, 184, 187, 471, 647, 776, 1065, 1155
SspI	AATATT	2 cut(s)	904, 1586
SspMI	CTAG	2 cut(s)	498, 998
StyD4I	CCNGG	3 cut(s)	206, 818, 1729
TaaI	ACNGT	3 cut(s)	87, 238, 462
TaiI	ACGT	1 cut(s)	35
TaqI	TCGA	4 cut(s)	35, 90, 734, 1260
TaqII	GACCGA	1 cut(s)	108
TasI	AATT	6 cut(s)	281, 755, 1089, 1271, 1398, 1648
TauI	GCSGC	2 cut(s)	189, 473
TfiI	GAWTC	2 cut(s)	195, 1763
Tru1I	TTAA	2 cut(s)	696, 1137
Tru9I	TTAA	2 cut(s)	696, 1137
TscAI	CASTG	4 cut(s)	235, 382, 620, 631
TseFI	GTSAC	1 cut(s)	62
TseI	GCWGC	5 cut(s)	44, 679, 962, 1022, 1344
Tsp45I	GTSAC	1 cut(s)	62
TspDTI	ATGAA	9 cut(s)	416, 429, 602, 650, 679, 860, 879, 1022, 1067
TspGWI	ACGGA	1 cut(s)	1166
TspRI	CASTG	4 cut(s)	235, 382, 620, 631
Van91I	CCANNNNNTGG	1 cut(s)	120
VneI	GTGCAC	1 cut(s)	1374
VpaK11BI	GGWCC	1 cut(s)	1170
XapI	RAATTY	1 cut(s)	1648
XceI	RCATGY	7 cut(s)	9, 261, 679, 1041, 1144, 1437, 1554
XmnI	GAANNNNTTC	2 cut(s)	870, 1074
XspI	CTAG	2 cut(s)	498, 998
ZraI	GACGTC	1 cut(s)	33
Zsp2I	ATGCAT	3 cut(s)	1039, 1111, 1439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.