FvH4_1g23291

Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
15164478 .. 15167916
3439 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g23291.t1

Sequence Viewer

Length: 606 bp
ATGGTCGATAGGAAAAGGGAAACACTAACTGAATTGTACAAGCCATTGCAAGACTCACTAATTAAGAAATGCATTAAGATCATTGACTTTGAGAAAAAACAGGATTCTCAAAGCAGTGCATTATTAAAAAGTGTTTGGTCTAAAGTCTTCCCAAAACCTAGAAGAAGTTGGCTACCAACTGGTTGCTTGAAACTGTTACATGGAGCACTACCAAAGATGTCTTTGATTGCTTCAGACTTTAGTTACCTACCTGACGTGAAAATACTTGGTGAAAGACCTCCATTGGTTTCAACCAAGAAAGATGGCAGCAGCACAGACTATGGCAGTTATCTTGATGCAAAGGGGGATGCCGATATCTTCTTCCCTACCGAATTCTGGTTATTGGAACGTATTGATCATTACTGTTCTGGATGGAAGAAGCTGCAAAAAGATGACTCATCCAAAGAAGGAAAGAAGAGGCGAACAATTATACTTGATACGTCATCATTCATGGAAGAATTTGGATTGCCCTCGAGGACAAGAACCAAGGATGGATACAATCCACTTTTGGATGACTTCAAGAATACAAAATTCTATTTAAGTGTCCCAACACATAATACTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

202

Amino Acids

23.11

Weight (kDa)

9.27

Isoelectric Point (pI)

50.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 511
AcsI RAATTY 3 cut(s) 371, 497, 569
AcuI CTGAAG 1 cut(s) 216
AfaI GTAC 1 cut(s) 38
AfiI CCNNNNNNNGG 1 cut(s) 375
AgsI TTSAA 3 cut(s) 190, 291, 559
AjiI CACGTC 1 cut(s) 256
AluBI AGCT 1 cut(s) 421
AluI AGCT 1 cut(s) 421
Alw21I GWGCWC 1 cut(s) 208
Ama87I CYCGRG 1 cut(s) 511
ApeKI GCWGC 3 cut(s) 306, 309, 421
ApoI RAATTY 3 cut(s) 371, 497, 569
AsuHPI GGTGA 1 cut(s) 281
AvaI CYCGRG 1 cut(s) 511
BbsI GAAGAC 1 cut(s) 139
Bbv12I GWGCWC 1 cut(s) 208
BbvI GCAGC 3 cut(s) 318, 321, 408
BccI CCATC 3 cut(s) 296, 405, 524
BciVI GTATCC 1 cut(s) 527
BclI TGATCA 1 cut(s) 394
BfaI CTAG 1 cut(s) 159
BfuI GTATCC 1 cut(s) 527
BisI GCNGC 3 cut(s) 307, 310, 422
BlsI GCNGC 3 cut(s) 308, 311, 423
BmeT110I CYCGRG 1 cut(s) 511
BmgBI CACGTC 1 cut(s) 256
BmsI GCATC 2 cut(s) 325, 337
BpiI GAAGAC 1 cut(s) 139
BsaJI CCNNGG 1 cut(s) 525
Bsc4I CCNNNNNNNGG 1 cut(s) 375
Bse1I ACTGG 1 cut(s) 184
Bse3DI GCAATG 1 cut(s) 44
BseDI CCNNGG 1 cut(s) 525
BseGI GGATG 5 cut(s) 352, 416, 437, 535, 556
BseLI CCNNNNNNNGG 1 cut(s) 375
BseMI GCAATG 1 cut(s) 44
BseNI ACTGG 1 cut(s) 184
BseXI GCAGC 3 cut(s) 318, 321, 408
BsiHKAI GWGCWC 1 cut(s) 208
BsiHKCI CYCGRG 1 cut(s) 511
BslFI GGGAC 1 cut(s) 569
BslI CCNNNNNNNGG 1 cut(s) 375
BsmFI GGGAC 1 cut(s) 569
BsoBI CYCGRG 1 cut(s) 511
Bsp1286I GDGCHC 1 cut(s) 208
Bsp1407I TGTACA 1 cut(s) 36
Bsp143I GATC 2 cut(s) 78, 394
BsrDI GCAATG 1 cut(s) 44
BsrGI TGTACA 1 cut(s) 36
BsrI ACTGG 1 cut(s) 184
BssECI CCNNGG 1 cut(s) 525
BssMI GATC 2 cut(s) 78, 394
BssT1I CCWWGG 1 cut(s) 525
Bst4CI ACNGT 2 cut(s) 195, 404
Bst6I CTCTTC 1 cut(s) 449
BstAUI TGTACA 1 cut(s) 36
BstF5I GGATG 5 cut(s) 352, 416, 437, 535, 556
BstKTI GATC 2 cut(s) 81, 397
BstMBI GATC 2 cut(s) 78, 394
BstV1I GCAGC 3 cut(s) 318, 321, 408
BstV2I GAAGAC 1 cut(s) 139
BsuI GTATCC 1 cut(s) 527
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 5 cut(s) 352, 416, 437, 535, 556
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 1 cut(s) 121
Csp6I GTAC 1 cut(s) 37
CviAII CATG 2 cut(s) 200, 490
CviJI RGCY 3 cut(s) 43, 172, 421
CviKI_1 RGCY 3 cut(s) 43, 172, 421
CviQI GTAC 1 cut(s) 37
DpnI GATC 2 cut(s) 80, 396
DpnII GATC 2 cut(s) 78, 394
Eam1104I CTCTTC 1 cut(s) 449
EarI CTCTTC 1 cut(s) 449
Eco130I CCWWGG 1 cut(s) 525
Eco32I GATATC 1 cut(s) 355
Eco57I CTGAAG 1 cut(s) 216
Eco88I CYCGRG 1 cut(s) 511
EcoRI GAATTC 1 cut(s) 371
EcoRV GATATC 1 cut(s) 355
EcoT14I CCWWGG 1 cut(s) 525
EcoT22I ATGCAT 1 cut(s) 74
ErhI CCWWGG 1 cut(s) 525
FaeI CATG 2 cut(s) 203, 493
FaiI YATR 6 cut(s) 201, 321, 470, 491, 594, 604
FaqI GGGAC 1 cut(s) 569
FatI CATG 2 cut(s) 199, 489
FbaI TGATCA 1 cut(s) 394
Fnu4HI GCNGC 3 cut(s) 307, 310, 422
FokI GGATG 5 cut(s) 359, 423, 424, 542, 563
Fsp4HI GCNGC 3 cut(s) 307, 310, 422
FspBI CTAG 1 cut(s) 159
GluI GCNGC 3 cut(s) 307, 310, 422
Hin1II CATG 2 cut(s) 203, 493
HinfI GANTC 3 cut(s) 53, 104, 434
HphI GGTGA 1 cut(s) 281
Hpy188I TCNGA 1 cut(s) 235
Hpy188III TCNNGA 3 cut(s) 332, 408, 559
HpyAV CCTTC 1 cut(s) 440
HpyCH4III ACNGT 2 cut(s) 195, 404
HpyCH4IV ACGT 3 cut(s) 255, 388, 479
HpyCH4V TGCA 5 cut(s) 49, 72, 119, 338, 424
HpySE526I ACGT 3 cut(s) 255, 388, 479
Hsp92II CATG 2 cut(s) 203, 493
Ksp22I TGATCA 1 cut(s) 394
Kzo9I GATC 2 cut(s) 78, 394
LmnI GCTCC 1 cut(s) 203
LpnPI CCDG 5 cut(s) 86, 165, 264, 361, 393
Lsp1109I GCAGC 3 cut(s) 318, 321, 408
LweI GCATC 2 cut(s) 325, 337
MaeI CTAG 1 cut(s) 159
MaeII ACGT 3 cut(s) 255, 388, 479
MaeIII GTNAC 2 cut(s) 195, 242
MalI GATC 2 cut(s) 80, 396
MboI GATC 2 cut(s) 78, 394
MboII GAAGA 7 cut(s) 139, 174, 349, 352, 427, 466, 506
MhlI GDGCHC 1 cut(s) 208
MluCI AATT 6 cut(s) 32, 60, 371, 465, 497, 569
MlyI GAGTC 2 cut(s) 47, 428
MnlI CCTC 4 cut(s) 288, 450, 507, 520
Mph1103I ATGCAT 1 cut(s) 74
MseI TTAA 4 cut(s) 63, 75, 125, 578
NdeII GATC 2 cut(s) 78, 394
NlaIII CATG 2 cut(s) 203, 493
NsiI ATGCAT 1 cut(s) 74
PaeR7I CTCGAG 1 cut(s) 511
PfeI GAWTC 1 cut(s) 104
PkrI GCNGC 3 cut(s) 308, 311, 423
PleI GAGTC 2 cut(s) 47, 428
PpsI GAGTC 2 cut(s) 47, 428
PspXI VCTCGAGB 1 cut(s) 511
RsaI GTAC 1 cut(s) 38
RsaNI GTAC 1 cut(s) 37
SaqAI TTAA 4 cut(s) 63, 75, 125, 578
SatI GCNGC 3 cut(s) 307, 310, 422
Sau3AI GATC 2 cut(s) 78, 394
SchI GAGTC 2 cut(s) 47, 428
SduI GDGCHC 1 cut(s) 208
SetI ASST 8 cut(s) 160, 249, 253, 258, 280, 391, 423, 482
SfaNI GCATC 2 cut(s) 325, 337
Sfr274I CTCGAG 1 cut(s) 511
SlaI CTCGAG 1 cut(s) 511
SmlI CTYRAG 1 cut(s) 511
SmoI CTYRAG 1 cut(s) 511
Sse9I AATT 6 cut(s) 32, 60, 371, 465, 497, 569
SspMI CTAG 1 cut(s) 159
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 2 cut(s) 195, 404
TaiI ACGT 3 cut(s) 258, 391, 482
TaqI TCGA 2 cut(s) 6, 512
TasI AATT 6 cut(s) 32, 60, 371, 465, 497, 569
TatI WGTACW 1 cut(s) 36
TfiI GAWTC 1 cut(s) 104
Tru1I TTAA 4 cut(s) 63, 75, 125, 578
Tru9I TTAA 4 cut(s) 63, 75, 125, 578
TscAI CASTG 1 cut(s) 121
TseI GCWGC 3 cut(s) 306, 309, 421
TspDTI ATGAA 2 cut(s) 478, 591
TspRI CASTG 1 cut(s) 121
XapI RAATTY 3 cut(s) 371, 497, 569
XhoI CTCGAG 1 cut(s) 511
XspI CTAG 1 cut(s) 159
Zsp2I ATGCAT 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.