Rh4DG192200

Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0008769
Physical Location & Seq
Forward (+)
37769706 .. 37780072
10367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG192200.1

Sequence Viewer

Length: 1353 bp
ATGGCGATGATGAGTCGCACTCTAAGTTCCAAGACTCTTCCTTTGCTCTTCCGCAACCCCAAAGTGAACCCATGTGAACTCTGGGCACTTCCATCCCAAGCCCTTTTCTCCACACACATTGTTGGTGAAAAACCAGTTCTTGTTCGTGATTTCATTCATTCTGCACTATATGACCCTCGACATGGTTATTTCGCTCAAAGATCGAGGTCGGTTGGTGTGCTTCAGAAAGCCATTAAGTTCAATCAGATTGAGGGCAGGAAAGCTTACATGAAATACTTGGATAAAATATACAAGGGAAGTGAGATATCGTGGTTTACTCCTGTGGAACTTTTTAAGCCTTGGTATGCCCACGGGATAGCTGAAGCCATAATGCGTACCGCTAACCTTTCAGTTCCCCTCAAGATATATGAAATTGGTGGTGGATCAGGAACTTGTGCAAAGGGAATCATGGATTACATATTGTTGAATGCACCTACCAGAGTTTACAACAATATGACTTACGTCTCAGTTGAAATCAGTCCCTCACTGGCTGAGCTACAAAGAGAAACTGTTGGAGAAGTTCGTAGTCACTTATCAAAGTTTCGAGTCGAATGCCGTGATGCTGCTGACCGGAAGGGATGGGGGGATGTGGAGCAAGAGCCATGCTGGGTAATAATGCTCGAGGTACTTGATAATCTTCCACATGATCTCATCTATTCTGAAAATCAAGTTTCACCATGGAAGGAAGTTTGGGTGGAGAACCAAGATGGAGAAACACTATCTGAATTGTACAAGCCATTGCAAGACTCACTAATTAAGCGATGCATTGAGATCATCGACTTCGAGAAAAAACATGATTCTGAAAGCAGTGCATTATTGAAAGCAAAAAGTGTTTGGTCTAAAGTCTTCCCAAAACCTCGAAGAAGTTGGCTACCAACTGGTTGCTTGAAACTACTTGAAGTGTTACATGGAGCACTACCAAAGATGTCTTTGATTGCTTCAGACTTTAGTTACCTACCTGACGTGAGAATACTTGGTGAAAGAGCTCCATTGGTTTCTACCAAGAAAGATGGCAGCAGCTCAGACTATGGCAGTTATCTTGATGCAAAGGGGGATGCTGATATCTTCTTCCCCACTGAATTTTGGTTATTGGAACGTATTGATCATTACTGTTCTGGATGGATGAAGCTGCAAAAAGATAACTCATCCAAAGAAGGAAAGAAGAGGCGAACAATTATACTTGATACATCTTCATTCATGGAAGAATTTGGATTGCCCTCGAGGACAAGAACCAAGGATGGATACAATCCACTTTTGGATGACTTCAAGAATACAAAATTCTATCTAAGTGTCCCAACACATAATACTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_28

Protein Analysis

450

Amino Acids

51.39

Weight (kDa)

8.46

Isoelectric Point (pI)

46.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_28 PF02636 123 - 387 1.3e-30 Putative S-adenosyl-L-methionine-dependent methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1258
AciI CCGC 2 cut(s) 52, 378
AclWI GGATC 1 cut(s) 430
AcsI RAATTY 3 cut(s) 1118, 1244, 1316
AcuI CTGAAG 3 cut(s) 206, 381, 963
AfaI GTAC 3 cut(s) 376, 666, 770
AfiI CCNNNNNNNGG 1 cut(s) 182
AgsI TTSAA 7 cut(s) 241, 466, 512, 859, 928, 938, 1306
AjiI CACGTC 1 cut(s) 1003
AluBI AGCT 6 cut(s) 263, 359, 535, 1025, 1059, 1168
AluI AGCT 6 cut(s) 263, 359, 535, 1025, 1059, 1168
Alw21I GWGCWC 2 cut(s) 955, 1027
Alw26I GTCTC 1 cut(s) 508
AlwI GGATC 1 cut(s) 430
Ama87I CYCGRG 2 cut(s) 659, 1258
ApeKI GCWGC 4 cut(s) 602, 1053, 1056, 1168
ApoI RAATTY 3 cut(s) 1118, 1244, 1316
ArsI GACNNNNNNTTYG 2 cut(s) 25, 57
AsuHPI GGTGA 3 cut(s) 137, 705, 1028
AvaI CYCGRG 2 cut(s) 659, 1258
BaeGI GKGCMC 1 cut(s) 88
BanII GRGCYC 1 cut(s) 1027
BbsI GAAGAC 1 cut(s) 877
Bbv12I GWGCWC 2 cut(s) 955, 1027
BbvI GCAGC 4 cut(s) 589, 1065, 1068, 1155
BccI CCATC 6 cut(s) 100, 612, 740, 1043, 1152, 1271
BceAI ACGGC 1 cut(s) 579
BcgI CGANNNNNNTGC 2 cut(s) 573, 607
BciVI GTATCC 1 cut(s) 1274
BclI TGATCA 1 cut(s) 1141
BcoDI GTCTC 1 cut(s) 508
BfuI GTATCC 1 cut(s) 1274
BisI GCNGC 4 cut(s) 603, 1054, 1057, 1169
BlpI GCTNAGC 1 cut(s) 531
BlsI GCNGC 4 cut(s) 604, 1055, 1058, 1170
BmeT110I CYCGRG 2 cut(s) 659, 1258
BmgBI CACGTC 1 cut(s) 1003
BmsI GCATC 4 cut(s) 589, 791, 1072, 1084
BoxI GACNNNNGTC 1 cut(s) 500
BpiI GAAGAC 1 cut(s) 877
BplI GAGNNNNNCTC 1 cut(s) 36
Bpu1102I GCTNAGC 1 cut(s) 531
BpuEI CTTGAG 1 cut(s) 383
BsaJI CCNNGG 4 cut(s) 338, 349, 716, 1272
BsaWI WCCGGW 1 cut(s) 609
Bsc4I CCNNNNNNNGG 1 cut(s) 182
Bse1I ACTGG 3 cut(s) 134, 531, 922
Bse3DI GCAATG 1 cut(s) 776
BseDI CCNNGG 4 cut(s) 338, 349, 716, 1272
BseGI GGATG 9 cut(s) 92, 623, 631, 1099, 1163, 1167, 1184, 1282, 1303
BseLI CCNNNNNNNGG 1 cut(s) 182
BseMI GCAATG 1 cut(s) 776
BseMII CTCAG 3 cut(s) 519, 522, 1074
BseNI ACTGG 3 cut(s) 134, 531, 922
BseSI GKGCMC 1 cut(s) 88
BseXI GCAGC 4 cut(s) 589, 1065, 1068, 1155
BseYI CCCAGC 1 cut(s) 645
BsgI GTGCAG 1 cut(s) 147
BsiHKAI GWGCWC 2 cut(s) 955, 1027
BsiHKCI CYCGRG 2 cut(s) 659, 1258
BsiSI CCGG 1 cut(s) 610
BslFI GGGAC 2 cut(s) 504, 1316
BslI CCNNNNNNNGG 1 cut(s) 182
BsmAI GTCTC 1 cut(s) 508
BsmBI CGTCTC 1 cut(s) 508
BsmFI GGGAC 2 cut(s) 504, 1316
BsmI GAATGC 2 cut(s) 472, 596
BsoBI CYCGRG 2 cut(s) 659, 1258
Bsp1286I GDGCHC 3 cut(s) 88, 955, 1027
Bsp1407I TGTACA 1 cut(s) 768
Bsp143I GATC 5 cut(s) 200, 422, 685, 810, 1141
Bsp1720I GCTNAGC 1 cut(s) 531
Bsp19I CCATGG 1 cut(s) 716
BspACI CCGC 2 cut(s) 52, 378
BspCNI CTCAG 3 cut(s) 518, 523, 1073
BspPI GGATC 1 cut(s) 430
BspQI GCTCTTC 1 cut(s) 53
BsrDI GCAATG 1 cut(s) 776
BsrGI TGTACA 1 cut(s) 768
BsrI ACTGG 3 cut(s) 134, 531, 922
BssECI CCNNGG 4 cut(s) 338, 349, 716, 1272
BssMI GATC 5 cut(s) 200, 422, 685, 810, 1141
BssT1I CCWWGG 3 cut(s) 338, 716, 1272
Bst4CI ACNGT 2 cut(s) 550, 1151
Bst6I CTCTTC 3 cut(s) 42, 53, 1196
BstAUI TGTACA 1 cut(s) 768
BstDEI CTNAG 5 cut(s) 23, 505, 531, 1060, 1325
BstDSI CCRYGG 2 cut(s) 349, 716
BstF5I GGATG 9 cut(s) 92, 623, 631, 1099, 1163, 1167, 1184, 1282, 1303
BstKTI GATC 5 cut(s) 203, 425, 688, 813, 1144
BstMAI GTCTC 1 cut(s) 508
BstMBI GATC 5 cut(s) 200, 422, 685, 810, 1141
BstPAI GACNNNNGTC 1 cut(s) 500
BstSLI GKGCMC 1 cut(s) 88
BstV1I GCAGC 4 cut(s) 589, 1065, 1068, 1155
BstV2I GAAGAC 1 cut(s) 877
BsuI GTATCC 1 cut(s) 1274
BtgI CCRYGG 2 cut(s) 349, 716
BtgZI GCGATG 2 cut(s) 20, 814
BtrI CACGTC 1 cut(s) 1003
BtsCI GGATG 9 cut(s) 92, 623, 631, 1099, 1163, 1167, 1184, 1282, 1303
BtsI GCAGTG 1 cut(s) 853
BtsIMutI CAGTG 3 cut(s) 524, 853, 1113
Csp6I GTAC 3 cut(s) 375, 665, 769
CspCI CAANNNNNGTGG 2 cut(s) 100, 135
CviQI GTAC 3 cut(s) 375, 665, 769
DdeI CTNAG 5 cut(s) 23, 505, 531, 1060, 1325
DpnI GATC 5 cut(s) 202, 424, 687, 812, 1143
DpnII GATC 5 cut(s) 200, 422, 685, 810, 1141
Eam1104I CTCTTC 3 cut(s) 42, 53, 1196
EarI CTCTTC 3 cut(s) 42, 53, 1196
Ecl136II GAGCTC 1 cut(s) 1025
Eco130I CCWWGG 3 cut(s) 338, 716, 1272
Eco24I GRGCYC 1 cut(s) 1027
Eco32I GATATC 2 cut(s) 306, 1102
Eco53kI GAGCTC 1 cut(s) 1025
Eco57I CTGAAG 3 cut(s) 206, 381, 963
Eco88I CYCGRG 2 cut(s) 659, 1258
EcoICRI GAGCTC 1 cut(s) 1025
EcoRV GATATC 2 cut(s) 306, 1102
EcoT14I CCWWGG 3 cut(s) 338, 716, 1272
EcoT22I ATGCAT 1 cut(s) 806
EcoT38I GRGCYC 1 cut(s) 1027
ErhI CCWWGG 3 cut(s) 338, 716, 1272
Esp3I CGTCTC 1 cut(s) 508
FaqI GGGAC 2 cut(s) 504, 1316
FbaI TGATCA 1 cut(s) 1141
Fnu4HI GCNGC 4 cut(s) 603, 1054, 1057, 1169
FokI GGATG 9 cut(s) 79, 630, 638, 1106, 1170, 1171, 1174, 1289, 1310
FriOI GRGCYC 1 cut(s) 1027
Fsp4HI GCNGC 4 cut(s) 603, 1054, 1057, 1169
GluI GCNGC 4 cut(s) 603, 1054, 1057, 1169
GsaI CCCAGC 1 cut(s) 649
HapII CCGG 1 cut(s) 610
HindIII AAGCTT 1 cut(s) 261
HinfI GANTC 6 cut(s) 13, 34, 444, 585, 785, 836
HpaII CCGG 1 cut(s) 610
HphI GGTGA 3 cut(s) 137, 705, 1028
Hpy166II GTNNAC 4 cut(s) 67, 77, 315, 484
Hpy188I TCNGA 7 cut(s) 225, 246, 700, 763, 841, 982, 1063
Hpy188III TCNNGA 7 cut(s) 146, 400, 426, 823, 1079, 1155, 1306
Hpy8I GTNNAC 4 cut(s) 67, 77, 315, 484
HpyAV CCTTC 3 cut(s) 607, 715, 1187
HpyCH4III ACNGT 2 cut(s) 550, 1151
HpyCH4IV ACGT 3 cut(s) 501, 1002, 1135
HpyCH4V TGCA 8 cut(s) 164, 437, 470, 781, 804, 851, 1085, 1171
HpyF3I CTNAG 5 cut(s) 23, 505, 531, 1060, 1325
HpySE526I ACGT 3 cut(s) 501, 1002, 1135
Ksp22I TGATCA 1 cut(s) 1141
Kzo9I GATC 5 cut(s) 200, 422, 685, 810, 1141
LguI GCTCTTC 1 cut(s) 53
LmnI GCTCC 3 cut(s) 631, 950, 1030
Lsp1109I GCAGC 4 cut(s) 589, 1065, 1068, 1155
LweI GCATC 4 cut(s) 589, 791, 1072, 1084
MaeII ACGT 3 cut(s) 501, 1002, 1135
MaeIII GTNAC 3 cut(s) 566, 942, 989
MalI GATC 5 cut(s) 202, 424, 687, 812, 1143
MboI GATC 5 cut(s) 200, 422, 685, 810, 1141
MhlI GDGCHC 3 cut(s) 88, 955, 1027
MluCI AATT 7 cut(s) 411, 764, 792, 1118, 1212, 1244, 1316
MlyI GAGTC 4 cut(s) 22, 28, 594, 779
MmeI TCCRAC 1 cut(s) 532
Mph1103I ATGCAT 1 cut(s) 806
MseI TTAA 3 cut(s) 234, 333, 795
MspI CCGG 1 cut(s) 610
Mva1269I GAATGC 2 cut(s) 472, 596
NcoI CCATGG 1 cut(s) 716
NdeII GATC 5 cut(s) 200, 422, 685, 810, 1141
NmuCI GTSAC 1 cut(s) 566
NsiI ATGCAT 1 cut(s) 806
PaeR7I CTCGAG 2 cut(s) 659, 1258
PciSI GCTCTTC 1 cut(s) 53
PctI GAATGC 2 cut(s) 472, 596
PfeI GAWTC 2 cut(s) 444, 836
PkrI GCNGC 4 cut(s) 604, 1055, 1058, 1170
PleI GAGTC 4 cut(s) 21, 28, 593, 779
PpsI GAGTC 4 cut(s) 21, 28, 593, 779
PshAI GACNNNNGTC 1 cut(s) 500
Psp124BI GAGCTC 1 cut(s) 1027
PspFI CCCAGC 1 cut(s) 645
PspXI VCTCGAGB 2 cut(s) 659, 1258
RsaI GTAC 3 cut(s) 376, 666, 770
RsaNI GTAC 3 cut(s) 375, 665, 769
SacI GAGCTC 1 cut(s) 1027
SapI GCTCTTC 1 cut(s) 53
SaqAI TTAA 3 cut(s) 234, 333, 795
SatI GCNGC 4 cut(s) 603, 1054, 1057, 1169
Sau3AI GATC 5 cut(s) 200, 422, 685, 810, 1141
SchI GAGTC 4 cut(s) 22, 28, 594, 779
SduI GDGCHC 3 cut(s) 88, 955, 1027
SfaNI GCATC 4 cut(s) 589, 791, 1072, 1084
Sfr274I CTCGAG 2 cut(s) 659, 1258
SlaI CTCGAG 2 cut(s) 659, 1258
SmlI CTYRAG 3 cut(s) 398, 659, 1258
SmoI CTYRAG 3 cut(s) 398, 659, 1258
Sse9I AATT 7 cut(s) 411, 764, 792, 1118, 1212, 1244, 1316
SsiI CCGC 2 cut(s) 52, 378
SstI GAGCTC 1 cut(s) 1027
StyI CCWWGG 3 cut(s) 338, 716, 1272
TaaI ACNGT 2 cut(s) 550, 1151
TaiI ACGT 3 cut(s) 504, 1005, 1138
TaqI TCGA 9 cut(s) 178, 203, 583, 588, 660, 816, 822, 898, 1259
TasI AATT 7 cut(s) 411, 764, 792, 1118, 1212, 1244, 1316
TatI WGTACW 1 cut(s) 768
TfiI GAWTC 2 cut(s) 444, 836
Tru1I TTAA 3 cut(s) 234, 333, 795
Tru9I TTAA 3 cut(s) 234, 333, 795
TscAI CASTG 3 cut(s) 531, 853, 1120
TseFI GTSAC 1 cut(s) 566
TseI GCWGC 4 cut(s) 602, 1053, 1056, 1168
Tsp45I GTSAC 1 cut(s) 566
TspDTI ATGAA 8 cut(s) 142, 146, 284, 423, 1178, 1221, 1225, 1338
TspRI CASTG 3 cut(s) 531, 853, 1120
XapI RAATTY 3 cut(s) 1118, 1244, 1316
XcmI CCANNNNNNNNNTGG 1 cut(s) 78
XhoI CTCGAG 2 cut(s) 659, 1258
Zsp2I ATGCAT 1 cut(s) 806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.